Genes within 1Mb (chr1:33139130:A:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000084652 TXLNA 959455 eQTL 3.50e-02 -0.0483 0.0229 0.0 0.0 0.18
ENSG00000116497 S100PBP 322363 eQTL 1.37e-06 -0.08 0.0165 0.0 0.0 0.18
ENSG00000116514 RNF19B 174445 eQTL 5.67e-05 0.0858 0.0212 0.0 0.0 0.18
ENSG00000121900 TMEM54 237692 eQTL 2.88e-02 0.0774 0.0353 0.0 0.0 0.18
ENSG00000134686 PHC2 -291922 eQTL 1.74e-03 -0.0327 0.0104 0.00308 0.0017 0.18
ENSG00000142920 AZIN2 58026 eQTL 3.43e-03 0.0778 0.0265 0.0 0.0 0.18
ENSG00000160094 ZNF362 -117362 eQTL 2.66e-09 -0.132 0.0219 0.0 0.0 0.18
ENSG00000162522 KIAA1522 397300 eQTL 3.09e-07 -0.191 0.037 0.0 0.0 0.18
ENSG00000162526 TSSK3 787609 eQTL 2.65e-03 0.128 0.0426 0.0019 0.00193 0.18
ENSG00000184389 A3GALT2 -181968 eQTL 7.17e-11 0.241 0.0365 0.0 0.0 0.18
ENSG00000220785 MTMR9LP 897510 eQTL 3.10e-02 0.109 0.0503 0.0 0.0 0.18
ENSG00000222046 DCDC2B 930036 eQTL 1.41e-02 0.0799 0.0325 0.00106 0.0 0.18
ENSG00000222112 RN7SKP16 -197734 eQTL 2.49e-02 -0.0679 0.0302 0.0 0.0 0.18
ENSG00000225313 AL513327.1 -168218 eQTL 4.31e-02 0.0379 0.0187 0.0013 0.0 0.18
ENSG00000278966 AL031602.1 165577 eQTL 1.62e-04 -0.167 0.0442 0.0 0.0 0.18
ENSG00000278997 AL662907.1 -4100 eQTL 2.60e-27 0.43 0.0385 0.048 0.0477 0.18
ENSG00000279179 AL662907.2 -23721 eQTL 8.32e-10 -0.142 0.0229 0.0 0.0 0.18


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116497 S100PBP 322363 1.25e-06 9.28e-07 2.52e-07 7e-07 9.77e-08 5.88e-07 9.43e-07 2e-07 7.08e-07 2.72e-07 1.09e-06 5.22e-07 1.57e-06 2.61e-07 3.94e-07 3.35e-07 6.98e-07 4.16e-07 4.49e-07 3.99e-07 3.91e-07 7.06e-07 5.49e-07 3.53e-07 1.64e-06 2.57e-07 5.04e-07 3.89e-07 6.33e-07 9.08e-07 4.61e-07 4.87e-08 5.95e-08 5.39e-07 3.93e-07 1.16e-07 4.68e-07 1.68e-07 3.34e-07 4.2e-08 1.01e-07 1.01e-06 1.39e-07 1.41e-07 1.41e-07 9.77e-08 1.47e-07 9.04e-08 1.11e-07
ENSG00000116514 RNF19B 174445 3.99e-06 4.35e-06 6.68e-07 2.52e-06 8.74e-07 1.58e-06 2.4e-06 6.43e-07 2.22e-06 1.43e-06 3.2e-06 1.4e-06 6.2e-06 1.88e-06 8.88e-07 1.62e-06 1.82e-06 2.25e-06 1.54e-06 1.21e-06 1.92e-06 3.44e-06 2.74e-06 1.46e-06 4.61e-06 1.37e-06 1.59e-06 1.8e-06 2.77e-06 2.46e-06 1.97e-06 3.85e-07 4.47e-07 1.82e-06 1.92e-06 6.2e-07 9.22e-07 4.93e-07 1.3e-06 3.99e-07 2.74e-07 4.11e-06 4.2e-07 1.56e-07 3.41e-07 3.22e-07 8.61e-07 2.41e-07 3.18e-07
ENSG00000134686 PHC2 -291922 1.32e-06 9.73e-07 3.25e-07 1.14e-06 1.96e-07 6.46e-07 1.33e-06 2.71e-07 1.09e-06 3.78e-07 1.35e-06 5.68e-07 2.01e-06 3.07e-07 4.12e-07 5.29e-07 8.26e-07 5.67e-07 7.25e-07 6.68e-07 6.56e-07 1.2e-06 7.79e-07 5.76e-07 1.94e-06 2.4e-07 6.81e-07 5.33e-07 9.15e-07 1.1e-06 5.58e-07 1.92e-07 1.37e-07 6.86e-07 5.8e-07 1.83e-07 6.25e-07 2.78e-07 4.52e-07 2.44e-07 1.39e-07 1.41e-06 3.59e-07 1.91e-07 2e-07 1.2e-07 1.9e-07 3.68e-08 1.91e-07
ENSG00000142920 AZIN2 58026 1.53e-05 1.48e-05 2.56e-06 8.64e-06 2.96e-06 7.23e-06 2.04e-05 2.18e-06 1.25e-05 6.58e-06 1.58e-05 6.53e-06 2.23e-05 5.67e-06 3.67e-06 7.21e-06 8.14e-06 1.11e-05 3.47e-06 3.14e-06 6.98e-06 1.28e-05 1.22e-05 3.7e-06 2.46e-05 4.32e-06 7.06e-06 5.28e-06 1.47e-05 1.19e-05 8.36e-06 1.03e-06 1.1e-06 3.54e-06 5.98e-06 2.66e-06 1.79e-06 2.02e-06 2.08e-06 9.95e-07 9.75e-07 1.73e-05 2.39e-06 2.22e-07 9.9e-07 1.76e-06 1.86e-06 8.09e-07 4.55e-07
ENSG00000160094 ZNF362 -117362 6.3e-06 7.92e-06 7.59e-07 4.07e-06 1.84e-06 3.88e-06 8.6e-06 1.07e-06 4.85e-06 3.06e-06 7.34e-06 3.34e-06 1.01e-05 3.13e-06 1.21e-06 3.85e-06 3.78e-06 4.01e-06 1.63e-06 1.51e-06 2.79e-06 6.12e-06 4.78e-06 1.87e-06 9.14e-06 1.97e-06 2.65e-06 1.74e-06 5.37e-06 5.02e-06 3.01e-06 9.88e-07 6.52e-07 2.3e-06 2.47e-06 9.43e-07 1.03e-06 8.34e-07 1.09e-06 5.32e-07 4.48e-07 7.37e-06 1.22e-06 1.32e-07 5.77e-07 9.89e-07 1.14e-06 7.14e-07 6.17e-07
ENSG00000162522 KIAA1522 397300 7.57e-07 5.7e-07 9.71e-08 4.31e-07 1.09e-07 3.2e-07 5.31e-07 7.98e-08 2.76e-07 2.01e-07 4.64e-07 2.33e-07 8.34e-07 1.34e-07 1.45e-07 1.49e-07 1.73e-07 2.96e-07 2.25e-07 1.32e-07 2.52e-07 3.34e-07 3.02e-07 1.23e-07 6.39e-07 2e-07 2.22e-07 1.88e-07 2.4e-07 4.27e-07 2.55e-07 7.79e-08 5.73e-08 1.75e-07 3.4e-07 4.95e-08 1.31e-07 1.24e-07 8.06e-08 2.77e-08 3.2e-08 4.02e-07 6.87e-08 6.48e-08 5.84e-08 1.48e-08 9.73e-08 1.79e-08 6.12e-08
ENSG00000184389 A3GALT2 -181968 3.54e-06 3.99e-06 5.97e-07 2.32e-06 7.62e-07 1.59e-06 2.55e-06 6.01e-07 1.92e-06 1.28e-06 2.57e-06 1.26e-06 5.46e-06 1.37e-06 8.73e-07 1.45e-06 1.55e-06 2.3e-06 1.57e-06 1.41e-06 1.57e-06 3.2e-06 2.44e-06 1.15e-06 4.32e-06 1.22e-06 1.47e-06 1.68e-06 2.28e-06 2e-06 2.01e-06 5.58e-07 4e-07 1.65e-06 1.75e-06 6.39e-07 9.24e-07 4.73e-07 1.32e-06 3.8e-07 3.02e-07 3.38e-06 3.65e-07 1.55e-07 3.68e-07 3.52e-07 8.29e-07 2.23e-07 2.69e-07
ENSG00000278966 AL031602.1 165577 4.17e-06 4.67e-06 7.62e-07 2.89e-06 1.08e-06 1.58e-06 2.98e-06 7.56e-07 2.44e-06 1.7e-06 3.55e-06 1.66e-06 6.82e-06 2.25e-06 8.99e-07 1.75e-06 2.04e-06 2.1e-06 1.42e-06 9.54e-07 2.12e-06 3.74e-06 3.3e-06 1.64e-06 4.97e-06 1.13e-06 1.79e-06 1.7e-06 3.52e-06 2.81e-06 2.02e-06 4.15e-07 5.52e-07 1.76e-06 2.06e-06 7.27e-07 9.14e-07 3.74e-07 1.06e-06 3.46e-07 2.14e-07 4.1e-06 4.19e-07 1.69e-07 3.27e-07 4.11e-07 8.74e-07 2.72e-07 3.24e-07
ENSG00000278997 AL662907.1 -4100 5.35e-05 4.26e-05 8.39e-06 1.97e-05 8.46e-06 1.95e-05 5.83e-05 6.73e-06 4.69e-05 2.29e-05 5.93e-05 2.39e-05 6.73e-05 1.89e-05 1.02e-05 2.99e-05 2.66e-05 3.66e-05 1.1e-05 9.23e-06 2.52e-05 5.12e-05 4.27e-05 1.29e-05 6.07e-05 1.32e-05 2.05e-05 1.88e-05 4.34e-05 3.66e-05 2.92e-05 2.67e-06 4.84e-06 8.73e-06 1.59e-05 8.07e-06 4.59e-06 4.86e-06 7.03e-06 4.15e-06 1.94e-06 4.87e-05 5.03e-06 5.27e-07 3.52e-06 5.4e-06 5.63e-06 2.65e-06 1.86e-06
ENSG00000279179 AL662907.2 -23721 3.44e-05 2.79e-05 4.95e-06 1.39e-05 5.42e-06 1.31e-05 3.87e-05 3.78e-06 2.44e-05 1.25e-05 2.96e-05 1.37e-05 3.96e-05 1.2e-05 5.84e-06 1.39e-05 1.51e-05 2.17e-05 7.02e-06 5.57e-06 1.27e-05 2.7e-05 2.61e-05 7.45e-06 3.83e-05 6.28e-06 1.04e-05 1.04e-05 2.76e-05 2.19e-05 1.57e-05 1.64e-06 2.21e-06 5.65e-06 1.01e-05 4.55e-06 2.72e-06 2.97e-06 3.63e-06 2.67e-06 1.72e-06 3.25e-05 3.07e-06 3.24e-07 2.13e-06 2.96e-06 3.64e-06 1.47e-06 1.38e-06