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Genes within 1Mb (chr1:33134514:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 53518 sc-eQTL 9.06e-01 -0.0237 0.2 0.052 CD4_CTL L2
ENSG00000084623 EIF3I 912586 sc-eQTL 1.38e-01 -0.276 0.185 0.052 CD4_CTL L2
ENSG00000084652 TXLNA 954839 sc-eQTL 9.61e-01 0.00977 0.198 0.052 CD4_CTL L2
ENSG00000116478 HDAC1 842431 sc-eQTL 6.83e-01 -0.0792 0.193 0.052 CD4_CTL L2
ENSG00000116497 S100PBP 317747 sc-eQTL 9.72e-01 0.00708 0.2 0.052 CD4_CTL L2
ENSG00000116514 RNF19B 169829 sc-eQTL 7.57e-01 0.0599 0.193 0.052 CD4_CTL L2
ENSG00000116525 TRIM62 -47545 sc-eQTL 7.12e-01 -0.0721 0.195 0.052 CD4_CTL L2
ENSG00000134684 YARS 316361 sc-eQTL 8.05e-01 0.0481 0.195 0.052 CD4_CTL L2
ENSG00000134686 PHC2 -296538 sc-eQTL 4.29e-01 0.147 0.185 0.052 CD4_CTL L2
ENSG00000142920 AZIN2 53410 sc-eQTL 6.12e-01 0.0966 0.19 0.052 CD4_CTL L2
ENSG00000160050 CCDC28B 934128 sc-eQTL 1.32e-01 -0.297 0.197 0.052 CD4_CTL L2
ENSG00000160055 TMEM234 912155 sc-eQTL 1.94e-01 -0.276 0.212 0.052 CD4_CTL L2
ENSG00000160058 BSDC1 739783 sc-eQTL 5.10e-01 -0.135 0.204 0.052 CD4_CTL L2
ENSG00000160094 ZNF362 -121978 sc-eQTL 3.68e-01 -0.177 0.196 0.052 CD4_CTL L2
ENSG00000162520 SYNC 430918 sc-eQTL 4.46e-01 -0.161 0.211 0.052 CD4_CTL L2
ENSG00000162521 RBBP4 483372 sc-eQTL 3.04e-01 -0.195 0.189 0.052 CD4_CTL L2
ENSG00000175130 MARCKSL1 798281 sc-eQTL 9.09e-01 -0.0229 0.2 0.052 CD4_CTL L2
ENSG00000176261 ZBTB8OS 483611 sc-eQTL 2.93e-01 0.213 0.203 0.052 CD4_CTL L2
ENSG00000182866 LCK 883275 sc-eQTL 1.65e-01 0.195 0.14 0.052 CD4_CTL L2
ENSG00000225828 FAM229A 770236 sc-eQTL 2.20e-01 -0.228 0.186 0.052 CD4_CTL L2
ENSG00000004455 AK2 53518 sc-eQTL 4.62e-01 0.154 0.209 0.053 CD8_TEM L2
ENSG00000084623 EIF3I 912586 sc-eQTL 3.49e-01 -0.18 0.191 0.053 CD8_TEM L2
ENSG00000084652 TXLNA 954839 sc-eQTL 6.57e-01 -0.0857 0.193 0.053 CD8_TEM L2
ENSG00000116478 HDAC1 842431 sc-eQTL 4.38e-01 -0.146 0.188 0.053 CD8_TEM L2
ENSG00000116497 S100PBP 317747 sc-eQTL 5.59e-01 -0.117 0.2 0.053 CD8_TEM L2
ENSG00000116514 RNF19B 169829 sc-eQTL 7.93e-01 -0.0547 0.209 0.053 CD8_TEM L2
ENSG00000116525 TRIM62 -47545 sc-eQTL 9.81e-01 0.00506 0.216 0.053 CD8_TEM L2
ENSG00000134684 YARS 316361 sc-eQTL 7.46e-01 0.059 0.182 0.053 CD8_TEM L2
ENSG00000134686 PHC2 -296538 sc-eQTL 6.75e-01 -0.0851 0.203 0.053 CD8_TEM L2
ENSG00000142920 AZIN2 53410 sc-eQTL 1.82e-01 0.243 0.181 0.053 CD8_TEM L2
ENSG00000160050 CCDC28B 934128 sc-eQTL 4.32e-01 0.144 0.183 0.053 CD8_TEM L2
ENSG00000160055 TMEM234 912155 sc-eQTL 6.30e-01 -0.0993 0.206 0.053 CD8_TEM L2
ENSG00000160058 BSDC1 739783 sc-eQTL 3.60e-01 -0.196 0.213 0.053 CD8_TEM L2
ENSG00000160094 ZNF362 -121978 sc-eQTL 6.93e-01 -0.0812 0.205 0.053 CD8_TEM L2
ENSG00000162520 SYNC 430918 sc-eQTL 9.23e-01 -0.0198 0.203 0.053 CD8_TEM L2
ENSG00000162521 RBBP4 483372 sc-eQTL 7.11e-02 0.328 0.181 0.053 CD8_TEM L2
ENSG00000175130 MARCKSL1 798281 sc-eQTL 2.64e-02 -0.361 0.161 0.053 CD8_TEM L2
ENSG00000176261 ZBTB8OS 483611 sc-eQTL 9.65e-02 0.31 0.186 0.053 CD8_TEM L2
ENSG00000182866 LCK 883275 sc-eQTL 5.40e-01 -0.0621 0.101 0.053 CD8_TEM L2
ENSG00000004455 AK2 53518 sc-eQTL 5.51e-01 0.125 0.209 0.051 NK_CD56bright L2
ENSG00000084623 EIF3I 912586 sc-eQTL 7.26e-01 0.0587 0.167 0.051 NK_CD56bright L2
ENSG00000084652 TXLNA 954839 sc-eQTL 6.13e-02 0.343 0.182 0.051 NK_CD56bright L2
ENSG00000116478 HDAC1 842431 sc-eQTL 8.59e-01 0.0327 0.184 0.051 NK_CD56bright L2
ENSG00000116497 S100PBP 317747 sc-eQTL 2.04e-01 -0.255 0.2 0.051 NK_CD56bright L2
ENSG00000116514 RNF19B 169829 sc-eQTL 8.13e-01 -0.0462 0.195 0.051 NK_CD56bright L2
ENSG00000116525 TRIM62 -47545 sc-eQTL 2.05e-01 0.264 0.208 0.051 NK_CD56bright L2
ENSG00000134684 YARS 316361 sc-eQTL 5.59e-02 -0.357 0.186 0.051 NK_CD56bright L2
ENSG00000134686 PHC2 -296538 sc-eQTL 9.05e-01 0.0225 0.188 0.051 NK_CD56bright L2
ENSG00000160050 CCDC28B 934128 sc-eQTL 2.64e-01 -0.201 0.18 0.051 NK_CD56bright L2
ENSG00000160055 TMEM234 912155 sc-eQTL 4.80e-01 -0.141 0.199 0.051 NK_CD56bright L2
ENSG00000160058 BSDC1 739783 sc-eQTL 2.80e-01 -0.227 0.21 0.051 NK_CD56bright L2
ENSG00000160094 ZNF362 -121978 sc-eQTL 8.33e-01 0.0452 0.215 0.051 NK_CD56bright L2
ENSG00000162520 SYNC 430918 sc-eQTL 9.99e-01 -0.000212 0.198 0.051 NK_CD56bright L2
ENSG00000162521 RBBP4 483372 sc-eQTL 7.90e-01 -0.0517 0.194 0.051 NK_CD56bright L2
ENSG00000175130 MARCKSL1 798281 sc-eQTL 4.60e-01 0.118 0.159 0.051 NK_CD56bright L2
ENSG00000176261 ZBTB8OS 483611 sc-eQTL 6.11e-01 -0.0966 0.19 0.051 NK_CD56bright L2
ENSG00000182866 LCK 883275 sc-eQTL 6.30e-01 -0.0697 0.145 0.051 NK_CD56bright L2
ENSG00000004455 AK2 53518 sc-eQTL 8.76e-01 0.0313 0.2 0.051 cDC L2
ENSG00000084623 EIF3I 912586 sc-eQTL 6.11e-01 -0.0885 0.174 0.051 cDC L2
ENSG00000084652 TXLNA 954839 sc-eQTL 4.59e-01 -0.167 0.225 0.051 cDC L2
ENSG00000116478 HDAC1 842431 sc-eQTL 3.67e-01 -0.179 0.197 0.051 cDC L2
ENSG00000116497 S100PBP 317747 sc-eQTL 5.44e-02 -0.406 0.21 0.051 cDC L2
ENSG00000116514 RNF19B 169829 sc-eQTL 2.84e-01 0.196 0.183 0.051 cDC L2
ENSG00000116525 TRIM62 -47545 sc-eQTL 6.90e-01 0.083 0.208 0.051 cDC L2
ENSG00000134684 YARS 316361 sc-eQTL 4.08e-01 -0.177 0.214 0.051 cDC L2
ENSG00000134686 PHC2 -296538 sc-eQTL 9.68e-02 -0.237 0.142 0.051 cDC L2
ENSG00000142920 AZIN2 53410 sc-eQTL 6.79e-02 0.205 0.112 0.051 cDC L2
ENSG00000160050 CCDC28B 934128 sc-eQTL 6.73e-01 0.0906 0.214 0.051 cDC L2
ENSG00000160055 TMEM234 912155 sc-eQTL 6.99e-01 0.0767 0.198 0.051 cDC L2
ENSG00000160058 BSDC1 739783 sc-eQTL 8.03e-01 0.0542 0.217 0.051 cDC L2
ENSG00000160062 ZBTB8A 595087 sc-eQTL 2.64e-02 -0.361 0.161 0.051 cDC L2
ENSG00000160094 ZNF362 -121978 sc-eQTL 6.15e-02 -0.366 0.194 0.051 cDC L2
ENSG00000162520 SYNC 430918 sc-eQTL 4.17e-01 -0.166 0.204 0.051 cDC L2
ENSG00000162521 RBBP4 483372 sc-eQTL 9.64e-01 -0.00801 0.177 0.051 cDC L2
ENSG00000162522 KIAA1522 392684 sc-eQTL 6.25e-01 -0.0968 0.198 0.051 cDC L2
ENSG00000175130 MARCKSL1 798281 sc-eQTL 4.88e-01 0.0945 0.136 0.051 cDC L2
ENSG00000176261 ZBTB8OS 483611 sc-eQTL 1.79e-01 -0.254 0.189 0.051 cDC L2
ENSG00000182866 LCK 883275 sc-eQTL 6.84e-01 -0.0619 0.152 0.051 cDC L2
ENSG00000225828 FAM229A 770236 sc-eQTL 3.11e-01 -0.204 0.201 0.051 cDC L2
ENSG00000004455 AK2 53518 sc-eQTL 4.35e-01 0.163 0.208 0.056 pDC L2
ENSG00000084623 EIF3I 912586 sc-eQTL 2.61e-01 -0.208 0.184 0.056 pDC L2
ENSG00000084652 TXLNA 954839 sc-eQTL 8.34e-01 0.0397 0.189 0.056 pDC L2
ENSG00000116478 HDAC1 842431 sc-eQTL 1.88e-01 -0.257 0.194 0.056 pDC L2
ENSG00000116497 S100PBP 317747 sc-eQTL 7.99e-01 -0.0436 0.171 0.056 pDC L2
ENSG00000116514 RNF19B 169829 sc-eQTL 2.36e-01 0.248 0.208 0.056 pDC L2
ENSG00000116525 TRIM62 -47545 sc-eQTL 9.79e-01 0.00548 0.207 0.056 pDC L2
ENSG00000134684 YARS 316361 sc-eQTL 8.93e-01 -0.0283 0.21 0.056 pDC L2
ENSG00000134686 PHC2 -296538 sc-eQTL 4.38e-01 0.131 0.168 0.056 pDC L2
ENSG00000142920 AZIN2 53410 sc-eQTL 3.49e-01 -0.137 0.145 0.056 pDC L2
ENSG00000160050 CCDC28B 934128 sc-eQTL 2.85e-02 0.395 0.179 0.056 pDC L2
ENSG00000160055 TMEM234 912155 sc-eQTL 4.77e-01 0.148 0.208 0.056 pDC L2
ENSG00000160058 BSDC1 739783 sc-eQTL 6.09e-01 -0.103 0.2 0.056 pDC L2
ENSG00000160062 ZBTB8A 595087 sc-eQTL 4.08e-01 0.147 0.178 0.056 pDC L2
ENSG00000160094 ZNF362 -121978 sc-eQTL 8.60e-01 -0.032 0.182 0.056 pDC L2
ENSG00000162520 SYNC 430918 sc-eQTL 4.57e-01 0.14 0.188 0.056 pDC L2
ENSG00000162521 RBBP4 483372 sc-eQTL 7.74e-01 -0.0393 0.137 0.056 pDC L2
ENSG00000162522 KIAA1522 392684 sc-eQTL 2.26e-01 -0.231 0.19 0.056 pDC L2
ENSG00000175130 MARCKSL1 798281 sc-eQTL 6.87e-01 0.0501 0.124 0.056 pDC L2
ENSG00000176261 ZBTB8OS 483611 sc-eQTL 7.45e-01 -0.0651 0.2 0.056 pDC L2
ENSG00000182866 LCK 883275 sc-eQTL 6.46e-01 0.0709 0.154 0.056 pDC L2
ENSG00000225828 FAM229A 770236 sc-eQTL 4.38e-01 -0.154 0.198 0.056 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116514 RNF19B 169829 eQTL 0.0104 -0.116 0.0454 0.0 0.0 0.0373
ENSG00000222112 RN7SKP16 -202350 eQTL 0.0187 -0.151 0.0643 0.0 0.0 0.0373
ENSG00000278966 AL031602.1 160961 eQTL 0.0124 -0.236 0.0944 0.0 0.0 0.0373
ENSG00000278997 AL662907.1 -8716 eQTL 0.0193 -0.203 0.0868 0.0 0.0 0.0373

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116514 RNF19B 169829 3.21e-06 2.54e-06 3.51e-07 1.71e-06 5.62e-07 8.16e-07 2.03e-06 6.48e-07 1.92e-06 1e-06 2.53e-06 1.4e-06 3.66e-06 1.37e-06 9.28e-07 1.7e-06 1.17e-06 2.25e-06 1.05e-06 1.3e-06 1.12e-06 3.02e-06 2.44e-06 1.17e-06 3.75e-06 1.26e-06 1.38e-06 1.69e-06 2.49e-06 1.98e-06 1.82e-06 3.05e-07 5.24e-07 1.24e-06 1.13e-06 9.71e-07 7.76e-07 4.38e-07 1.18e-06 3.97e-07 2.11e-07 3.33e-06 4.36e-07 1.99e-07 2.73e-07 3.33e-07 7.09e-07 2.34e-07 1.98e-07
ENSG00000160055 \N 912155 2.8e-07 1.27e-07 4.91e-08 1.81e-07 9.79e-08 9.9e-08 1.6e-07 5.48e-08 1.45e-07 5.67e-08 1.52e-07 1.05e-07 1.53e-07 7.13e-08 6.18e-08 7.5e-08 4.09e-08 1.4e-07 5.97e-08 4.31e-08 1.19e-07 1.24e-07 1.45e-07 2.93e-08 1.55e-07 1.25e-07 1.1e-07 9.74e-08 1.2e-07 1.07e-07 1.02e-07 3.06e-08 3.66e-08 8.11e-08 6.34e-08 3.49e-08 4.99e-08 9.36e-08 6.37e-08 3.92e-08 5.03e-08 1.4e-07 5.2e-08 1.81e-08 4.67e-08 1.84e-08 1.22e-07 3.8e-09 4.88e-08