Genes within 1Mb (chr1:33094132:G:C):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 13136 sc-eQTL 9.85e-01 -0.00396 0.215 0.052 gdT L2
ENSG00000025800 KPNA6 986076 sc-eQTL 4.21e-01 0.193 0.24 0.052 gdT L2
ENSG00000084623 EIF3I 872204 sc-eQTL 3.81e-02 0.477 0.228 0.052 gdT L2
ENSG00000084652 TXLNA 914457 sc-eQTL 2.43e-01 0.244 0.208 0.052 gdT L2
ENSG00000116478 HDAC1 802049 sc-eQTL 5.87e-01 0.11 0.202 0.052 gdT L2
ENSG00000116497 S100PBP 277365 sc-eQTL 3.26e-01 -0.197 0.2 0.052 gdT L2
ENSG00000116514 RNF19B 129447 sc-eQTL 3.63e-01 -0.18 0.197 0.052 gdT L2
ENSG00000116525 TRIM62 -87927 sc-eQTL 1.75e-02 0.545 0.227 0.052 gdT L2
ENSG00000134684 YARS 275979 sc-eQTL 7.67e-01 -0.0655 0.221 0.052 gdT L2
ENSG00000134686 PHC2 -336920 sc-eQTL 3.62e-01 0.177 0.193 0.052 gdT L2
ENSG00000142920 AZIN2 13028 sc-eQTL 1.35e-01 -0.296 0.197 0.052 gdT L2
ENSG00000160050 CCDC28B 893746 sc-eQTL 5.51e-01 -0.112 0.187 0.052 gdT L2
ENSG00000160055 TMEM234 871773 sc-eQTL 6.99e-01 -0.0845 0.218 0.052 gdT L2
ENSG00000160058 BSDC1 699401 sc-eQTL 2.03e-02 0.515 0.219 0.052 gdT L2
ENSG00000160094 ZNF362 -162360 sc-eQTL 1.44e-01 -0.327 0.223 0.052 gdT L2
ENSG00000162520 SYNC 390536 sc-eQTL 1.57e-01 0.307 0.216 0.052 gdT L2
ENSG00000162521 RBBP4 442990 sc-eQTL 6.61e-01 0.0917 0.209 0.052 gdT L2
ENSG00000175130 MARCKSL1 757899 sc-eQTL 5.63e-01 -0.117 0.201 0.052 gdT L2
ENSG00000176261 ZBTB8OS 443229 sc-eQTL 6.60e-01 -0.1 0.227 0.052 gdT L2
ENSG00000182866 LCK 842893 sc-eQTL 6.00e-01 -0.0695 0.132 0.052 gdT L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000004455 AK2 13136 eQTL 0.00392 -0.0847 0.0293 0.0 0.0 0.0491
ENSG00000116497 S100PBP 277365 eQTL 0.00386 -0.0868 0.03 0.001 0.0 0.0491
ENSG00000116514 RNF19B 129447 eQTL 0.011 -0.0981 0.0385 0.0 0.0 0.0491
ENSG00000116525 TRIM62 -87927 eQTL 0.0269 0.0786 0.0355 0.0 0.0 0.0491
ENSG00000142920 AZIN2 13028 eQTL 0.0242 0.108 0.048 0.0 0.0 0.0491
ENSG00000182866 LCK 842893 eQTL 0.0405 -0.0355 0.0173 0.00173 0.0 0.0491
ENSG00000184389 A3GALT2 -226966 eQTL 0.00289 0.2 0.0671 0.0 0.0 0.0491
ENSG00000217644 AL355864.1 114185 eQTL 0.0494 -0.174 0.0884 0.0 0.0 0.0491
ENSG00000278966 AL031602.1 120579 eQTL 0.00251 -0.242 0.08 0.0 0.0 0.0491
ENSG00000278997 AL662907.1 -49098 eQTL 1.54e-06 0.353 0.073 0.0 0.0 0.0491
ENSG00000279179 AL662907.2 -68719 eQTL 0.00956 -0.109 0.042 0.0 0.0 0.0491


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000004455 AK2 13136 3.69e-05 3.47e-05 7.04e-06 1.72e-05 7.11e-06 1.82e-05 5.03e-05 6.24e-06 3.88e-05 1.97e-05 4.74e-05 2.16e-05 5.93e-05 1.67e-05 8.67e-06 2.43e-05 2.12e-05 3.03e-05 1.05e-05 8.89e-06 2.02e-05 3.96e-05 3.58e-05 1.12e-05 5.52e-05 1.08e-05 1.85e-05 1.64e-05 3.85e-05 3.19e-05 2.61e-05 2.34e-06 4.65e-06 8.55e-06 1.43e-05 7.7e-06 4.28e-06 3.84e-06 6.51e-06 3.95e-06 1.92e-06 4.16e-05 4.22e-06 5.19e-07 3.11e-06 5.22e-06 5.18e-06 2.54e-06 1.69e-06
ENSG00000116525 TRIM62 -87927 7.86e-06 9.55e-06 1.29e-06 5.08e-06 2.25e-06 4.22e-06 1.01e-05 1.97e-06 8.69e-06 4.81e-06 1.11e-05 4.92e-06 1.39e-05 3.84e-06 2.37e-06 6.1e-06 4.01e-06 5.96e-06 2.66e-06 2.78e-06 4.67e-06 8e-06 6.94e-06 3.16e-06 1.27e-05 3.33e-06 4.7e-06 3.77e-06 8.8e-06 7.94e-06 5.07e-06 1.01e-06 1.21e-06 3.12e-06 4.48e-06 2.21e-06 1.87e-06 1.9e-06 1.89e-06 9.75e-07 1.03e-06 1.13e-05 1.23e-06 1.9e-07 7.07e-07 1.68e-06 1.3e-06 7.67e-07 4.82e-07
ENSG00000184389 A3GALT2 -226966 1.92e-06 2.68e-06 2.86e-07 1.76e-06 4.41e-07 8.14e-07 1.31e-06 5.78e-07 1.63e-06 7.32e-07 1.93e-06 1.39e-06 3.49e-06 1.13e-06 4.4e-07 1.06e-06 1.09e-06 1.42e-06 7.31e-07 1.13e-06 7.87e-07 1.96e-06 1.56e-06 9.82e-07 2.62e-06 1.26e-06 1.22e-06 1.38e-06 1.68e-06 1.67e-06 1.06e-06 3.44e-07 5.03e-07 1.24e-06 9.55e-07 7.02e-07 8.89e-07 4.12e-07 1.11e-06 3.79e-07 3.2e-07 2.7e-06 4.11e-07 1.89e-07 3.38e-07 3.19e-07 4.32e-07 2.41e-07 2.46e-07
ENSG00000278966 AL031602.1 120579 5.65e-06 6.47e-06 6.56e-07 3.69e-06 1.54e-06 1.95e-06 7.57e-06 1.26e-06 4.64e-06 3.05e-06 7.68e-06 2.82e-06 1.02e-05 2.59e-06 9.3e-07 3.9e-06 2.92e-06 3.99e-06 1.81e-06 1.79e-06 2.75e-06 5.44e-06 4.67e-06 1.96e-06 9.11e-06 2.11e-06 3.05e-06 1.9e-06 5.66e-06 5.27e-06 3.25e-06 5.85e-07 6.46e-07 2.43e-06 2.38e-06 1.31e-06 1.35e-06 5.24e-07 1.24e-06 8.46e-07 7.1e-07 7.41e-06 6.63e-07 1.61e-07 7.7e-07 1.07e-06 9.9e-07 6.85e-07 5.73e-07
ENSG00000278997 AL662907.1 -49098 1.4e-05 1.54e-05 2.64e-06 9.64e-06 2.7e-06 7.14e-06 2.04e-05 3.25e-06 1.62e-05 7.58e-06 1.97e-05 7.7e-06 2.86e-05 6.35e-06 4.83e-06 9.06e-06 8.14e-06 1.22e-05 4.65e-06 4.27e-06 7.53e-06 1.39e-05 1.36e-05 4.73e-06 2.55e-05 5.23e-06 8e-06 7.23e-06 1.66e-05 1.38e-05 1.08e-05 1.27e-06 1.67e-06 4.4e-06 7.46e-06 3.74e-06 1.97e-06 2.61e-06 2.91e-06 2.11e-06 1.3e-06 1.88e-05 2.35e-06 3.33e-07 1.43e-06 2.56e-06 2.8e-06 1.14e-06 8.61e-07
ENSG00000279179 AL662907.2 -68719 1.03e-05 1.2e-05 1.88e-06 7.07e-06 2.28e-06 5.29e-06 1.23e-05 2.14e-06 1.06e-05 5.43e-06 1.41e-05 6.11e-06 1.96e-05 4.2e-06 3.51e-06 6.61e-06 5.73e-06 8.13e-06 3.37e-06 3.15e-06 6.38e-06 1.04e-05 8.93e-06 3.4e-06 1.75e-05 4.36e-06 6.78e-06 5.04e-06 1.25e-05 9.15e-06 7.11e-06 9.95e-07 1.23e-06 3.63e-06 5.44e-06 2.79e-06 1.76e-06 1.99e-06 2.06e-06 1.26e-06 9.34e-07 1.37e-05 1.49e-06 2.52e-07 7.75e-07 1.76e-06 1.82e-06 7.2e-07 4.43e-07