logo

Genes within 1Mb (chr1:32921484:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 -159512 sc-eQTL 9.53e-02 -0.337 0.201 0.052 CD4_CTL L2
ENSG00000025800 KPNA6 813428 sc-eQTL 4.87e-01 -0.155 0.222 0.052 CD4_CTL L2
ENSG00000084623 EIF3I 699556 sc-eQTL 5.27e-01 -0.12 0.189 0.052 CD4_CTL L2
ENSG00000084652 TXLNA 741809 sc-eQTL 5.00e-01 -0.135 0.2 0.052 CD4_CTL L2
ENSG00000116478 HDAC1 629401 sc-eQTL 7.78e-01 0.0554 0.196 0.052 CD4_CTL L2
ENSG00000116497 S100PBP 104717 sc-eQTL 7.89e-01 0.0543 0.203 0.052 CD4_CTL L2
ENSG00000116514 RNF19B -43201 sc-eQTL 4.27e-01 0.156 0.196 0.052 CD4_CTL L2
ENSG00000116525 TRIM62 -260575 sc-eQTL 6.15e-01 -0.0998 0.198 0.052 CD4_CTL L2
ENSG00000121774 KHDRBS1 907616 sc-eQTL 8.08e-01 -0.0417 0.172 0.052 CD4_CTL L2
ENSG00000121775 TMEM39B 849453 sc-eQTL 8.27e-01 -0.0463 0.212 0.052 CD4_CTL L2
ENSG00000134684 YARS 103331 sc-eQTL 3.51e-01 0.184 0.197 0.052 CD4_CTL L2
ENSG00000134686 PHC2 -509568 sc-eQTL 9.51e-01 0.0115 0.188 0.052 CD4_CTL L2
ENSG00000142920 AZIN2 -159620 sc-eQTL 9.27e-02 0.323 0.191 0.052 CD4_CTL L2
ENSG00000160050 CCDC28B 721098 sc-eQTL 8.68e-01 -0.0335 0.2 0.052 CD4_CTL L2
ENSG00000160055 TMEM234 699125 sc-eQTL 8.40e-01 -0.0437 0.216 0.052 CD4_CTL L2
ENSG00000160058 BSDC1 526753 sc-eQTL 3.62e-01 -0.189 0.207 0.052 CD4_CTL L2
ENSG00000160094 ZNF362 -335008 sc-eQTL 4.69e-01 -0.144 0.198 0.052 CD4_CTL L2
ENSG00000162520 SYNC 217888 sc-eQTL 4.07e-01 0.177 0.213 0.052 CD4_CTL L2
ENSG00000162521 RBBP4 270342 sc-eQTL 2.73e-01 -0.211 0.192 0.052 CD4_CTL L2
ENSG00000175130 MARCKSL1 585251 sc-eQTL 6.12e-01 0.103 0.203 0.052 CD4_CTL L2
ENSG00000176261 ZBTB8OS 270581 sc-eQTL 8.49e-01 -0.0393 0.206 0.052 CD4_CTL L2
ENSG00000182866 LCK 670245 sc-eQTL 5.85e-01 0.0778 0.142 0.052 CD4_CTL L2
ENSG00000184007 PTP4A2 976628 sc-eQTL 1.75e-01 -0.155 0.114 0.052 CD4_CTL L2
ENSG00000225828 FAM229A 557206 sc-eQTL 1.14e-01 -0.298 0.188 0.052 CD4_CTL L2
ENSG00000004455 AK2 -159512 sc-eQTL 9.99e-01 0.000302 0.213 0.053 CD8_TEM L2
ENSG00000025800 KPNA6 813428 sc-eQTL 5.33e-01 0.138 0.221 0.053 CD8_TEM L2
ENSG00000084623 EIF3I 699556 sc-eQTL 5.12e-01 -0.128 0.195 0.053 CD8_TEM L2
ENSG00000084652 TXLNA 741809 sc-eQTL 9.67e-01 -0.00815 0.197 0.053 CD8_TEM L2
ENSG00000116478 HDAC1 629401 sc-eQTL 8.56e-01 0.0348 0.192 0.053 CD8_TEM L2
ENSG00000116497 S100PBP 104717 sc-eQTL 5.44e-01 -0.124 0.204 0.053 CD8_TEM L2
ENSG00000116514 RNF19B -43201 sc-eQTL 5.37e-01 0.131 0.213 0.053 CD8_TEM L2
ENSG00000116525 TRIM62 -260575 sc-eQTL 3.58e-01 0.203 0.22 0.053 CD8_TEM L2
ENSG00000121774 KHDRBS1 907616 sc-eQTL 3.07e-01 -0.192 0.188 0.053 CD8_TEM L2
ENSG00000121775 TMEM39B 849453 sc-eQTL 5.26e-01 -0.131 0.206 0.053 CD8_TEM L2
ENSG00000134684 YARS 103331 sc-eQTL 2.28e-01 0.224 0.185 0.053 CD8_TEM L2
ENSG00000134686 PHC2 -509568 sc-eQTL 6.51e-01 -0.0936 0.207 0.053 CD8_TEM L2
ENSG00000142920 AZIN2 -159620 sc-eQTL 1.27e-01 0.284 0.185 0.053 CD8_TEM L2
ENSG00000160050 CCDC28B 721098 sc-eQTL 9.32e-01 0.0159 0.187 0.053 CD8_TEM L2
ENSG00000160055 TMEM234 699125 sc-eQTL 8.71e-01 -0.0341 0.21 0.053 CD8_TEM L2
ENSG00000160058 BSDC1 526753 sc-eQTL 9.85e-02 -0.36 0.217 0.053 CD8_TEM L2
ENSG00000160094 ZNF362 -335008 sc-eQTL 3.27e-01 0.205 0.209 0.053 CD8_TEM L2
ENSG00000162520 SYNC 217888 sc-eQTL 9.49e-01 0.0133 0.208 0.053 CD8_TEM L2
ENSG00000162521 RBBP4 270342 sc-eQTL 1.74e-01 0.253 0.185 0.053 CD8_TEM L2
ENSG00000175130 MARCKSL1 585251 sc-eQTL 3.05e-01 -0.171 0.166 0.053 CD8_TEM L2
ENSG00000176261 ZBTB8OS 270581 sc-eQTL 2.09e-01 0.24 0.19 0.053 CD8_TEM L2
ENSG00000182866 LCK 670245 sc-eQTL 7.33e-01 0.0353 0.103 0.053 CD8_TEM L2
ENSG00000184007 PTP4A2 976628 sc-eQTL 8.63e-01 -0.0283 0.163 0.053 CD8_TEM L2
ENSG00000004455 AK2 -159512 sc-eQTL 7.66e-01 -0.0627 0.21 0.051 NK_CD56bright L2
ENSG00000025800 KPNA6 813428 sc-eQTL 5.72e-01 0.125 0.22 0.051 NK_CD56bright L2
ENSG00000084623 EIF3I 699556 sc-eQTL 6.54e-01 0.0754 0.168 0.051 NK_CD56bright L2
ENSG00000084652 TXLNA 741809 sc-eQTL 1.86e-01 0.244 0.184 0.051 NK_CD56bright L2
ENSG00000116478 HDAC1 629401 sc-eQTL 5.91e-01 0.0993 0.185 0.051 NK_CD56bright L2
ENSG00000116497 S100PBP 104717 sc-eQTL 5.84e-01 -0.111 0.202 0.051 NK_CD56bright L2
ENSG00000116514 RNF19B -43201 sc-eQTL 2.94e-01 -0.206 0.195 0.051 NK_CD56bright L2
ENSG00000116525 TRIM62 -260575 sc-eQTL 4.58e-01 0.156 0.21 0.051 NK_CD56bright L2
ENSG00000121774 KHDRBS1 907616 sc-eQTL 9.51e-01 0.0104 0.169 0.051 NK_CD56bright L2
ENSG00000121775 TMEM39B 849453 sc-eQTL 4.73e-02 -0.427 0.214 0.051 NK_CD56bright L2
ENSG00000134684 YARS 103331 sc-eQTL 1.27e-01 -0.287 0.188 0.051 NK_CD56bright L2
ENSG00000134686 PHC2 -509568 sc-eQTL 8.07e-01 -0.0465 0.19 0.051 NK_CD56bright L2
ENSG00000160050 CCDC28B 721098 sc-eQTL 3.64e-02 -0.378 0.18 0.051 NK_CD56bright L2
ENSG00000160055 TMEM234 699125 sc-eQTL 2.73e-01 -0.22 0.2 0.051 NK_CD56bright L2
ENSG00000160058 BSDC1 526753 sc-eQTL 3.46e-01 -0.199 0.211 0.051 NK_CD56bright L2
ENSG00000160094 ZNF362 -335008 sc-eQTL 3.37e-01 -0.208 0.215 0.051 NK_CD56bright L2
ENSG00000162520 SYNC 217888 sc-eQTL 2.03e-01 0.254 0.199 0.051 NK_CD56bright L2
ENSG00000162521 RBBP4 270342 sc-eQTL 2.24e-01 0.238 0.195 0.051 NK_CD56bright L2
ENSG00000175130 MARCKSL1 585251 sc-eQTL 2.06e-01 0.202 0.159 0.051 NK_CD56bright L2
ENSG00000176261 ZBTB8OS 270581 sc-eQTL 8.69e-01 -0.0317 0.191 0.051 NK_CD56bright L2
ENSG00000182866 LCK 670245 sc-eQTL 3.75e-01 -0.129 0.145 0.051 NK_CD56bright L2
ENSG00000184007 PTP4A2 976628 sc-eQTL 2.77e-01 0.178 0.163 0.051 NK_CD56bright L2
ENSG00000004455 AK2 -159512 sc-eQTL 9.48e-01 0.0159 0.242 0.052 PB L2
ENSG00000025800 KPNA6 813428 sc-eQTL 6.74e-01 -0.114 0.271 0.052 PB L2
ENSG00000084623 EIF3I 699556 sc-eQTL 4.49e-01 0.121 0.159 0.052 PB L2
ENSG00000084652 TXLNA 741809 sc-eQTL 4.84e-01 -0.149 0.211 0.052 PB L2
ENSG00000116478 HDAC1 629401 sc-eQTL 7.01e-01 -0.0946 0.246 0.052 PB L2
ENSG00000116497 S100PBP 104717 sc-eQTL 8.10e-01 0.0633 0.262 0.052 PB L2
ENSG00000116514 RNF19B -43201 sc-eQTL 7.13e-01 0.101 0.274 0.052 PB L2
ENSG00000116525 TRIM62 -260575 sc-eQTL 4.70e-01 0.195 0.268 0.052 PB L2
ENSG00000121774 KHDRBS1 907616 sc-eQTL 8.45e-01 -0.0432 0.221 0.052 PB L2
ENSG00000121775 TMEM39B 849453 sc-eQTL 6.71e-01 -0.108 0.254 0.052 PB L2
ENSG00000134684 YARS 103331 sc-eQTL 8.90e-01 -0.0268 0.193 0.052 PB L2
ENSG00000134686 PHC2 -509568 sc-eQTL 3.70e-01 0.242 0.269 0.052 PB L2
ENSG00000160050 CCDC28B 721098 sc-eQTL 3.59e-01 0.222 0.241 0.052 PB L2
ENSG00000160055 TMEM234 699125 sc-eQTL 7.95e-01 -0.0725 0.279 0.052 PB L2
ENSG00000160058 BSDC1 526753 sc-eQTL 1.60e-01 -0.427 0.302 0.052 PB L2
ENSG00000160094 ZNF362 -335008 sc-eQTL 8.47e-01 0.054 0.279 0.052 PB L2
ENSG00000162520 SYNC 217888 sc-eQTL 5.47e-01 -0.133 0.22 0.052 PB L2
ENSG00000162521 RBBP4 270342 sc-eQTL 3.80e-01 -0.171 0.193 0.052 PB L2
ENSG00000175130 MARCKSL1 585251 sc-eQTL 9.27e-01 0.0185 0.201 0.052 PB L2
ENSG00000176261 ZBTB8OS 270581 sc-eQTL 8.50e-01 -0.0306 0.162 0.052 PB L2
ENSG00000182866 LCK 670245 sc-eQTL 1.89e-02 0.586 0.246 0.052 PB L2
ENSG00000184007 PTP4A2 976628 sc-eQTL 2.42e-01 -0.203 0.172 0.052 PB L2
ENSG00000004455 AK2 -159512 sc-eQTL 3.54e-01 -0.136 0.146 0.05 Pro_T L2
ENSG00000025800 KPNA6 813428 sc-eQTL 4.17e-01 -0.177 0.218 0.05 Pro_T L2
ENSG00000084623 EIF3I 699556 sc-eQTL 1.70e-02 -0.332 0.138 0.05 Pro_T L2
ENSG00000084652 TXLNA 741809 sc-eQTL 1.92e-01 0.246 0.188 0.05 Pro_T L2
ENSG00000116478 HDAC1 629401 sc-eQTL 3.54e-01 0.153 0.165 0.05 Pro_T L2
ENSG00000116497 S100PBP 104717 sc-eQTL 8.48e-01 0.0383 0.199 0.05 Pro_T L2
ENSG00000116514 RNF19B -43201 sc-eQTL 5.45e-02 -0.377 0.195 0.05 Pro_T L2
ENSG00000116525 TRIM62 -260575 sc-eQTL 4.59e-01 0.144 0.194 0.05 Pro_T L2
ENSG00000121774 KHDRBS1 907616 sc-eQTL 8.62e-03 -0.418 0.158 0.05 Pro_T L2
ENSG00000121775 TMEM39B 849453 sc-eQTL 8.78e-01 0.0298 0.193 0.05 Pro_T L2
ENSG00000134684 YARS 103331 sc-eQTL 2.61e-01 -0.177 0.157 0.05 Pro_T L2
ENSG00000134686 PHC2 -509568 sc-eQTL 1.05e-01 -0.265 0.163 0.05 Pro_T L2
ENSG00000142920 AZIN2 -159620 sc-eQTL 9.71e-01 -0.00595 0.164 0.05 Pro_T L2
ENSG00000160050 CCDC28B 721098 sc-eQTL 4.87e-01 -0.1 0.144 0.05 Pro_T L2
ENSG00000160055 TMEM234 699125 sc-eQTL 4.82e-01 0.143 0.203 0.05 Pro_T L2
ENSG00000160058 BSDC1 526753 sc-eQTL 5.30e-01 -0.141 0.224 0.05 Pro_T L2
ENSG00000160094 ZNF362 -335008 sc-eQTL 7.99e-01 0.0495 0.194 0.05 Pro_T L2
ENSG00000162520 SYNC 217888 sc-eQTL 1.89e-01 0.221 0.168 0.05 Pro_T L2
ENSG00000162521 RBBP4 270342 sc-eQTL 7.59e-01 -0.0441 0.144 0.05 Pro_T L2
ENSG00000175130 MARCKSL1 585251 sc-eQTL 3.42e-01 0.158 0.166 0.05 Pro_T L2
ENSG00000176261 ZBTB8OS 270581 sc-eQTL 5.19e-01 -0.0974 0.151 0.05 Pro_T L2
ENSG00000182866 LCK 670245 sc-eQTL 5.36e-01 0.0631 0.102 0.05 Pro_T L2
ENSG00000184007 PTP4A2 976628 sc-eQTL 1.80e-01 -0.212 0.157 0.05 Pro_T L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000004455 AK2 -159512 eQTL 0.0438 -0.0609 0.0302 0.0 0.0 0.0451
ENSG00000160097 FNDC5 49002 eQTL 0.0322 -0.198 0.0925 0.00182 0.0 0.0451
ENSG00000162520 SYNC 217888 eQTL 0.465 -0.0536 0.0734 0.00157 0.0 0.0451
ENSG00000222112 RN7SKP16 -415380 eQTL 0.0302 -0.122 0.0561 0.0 0.0 0.0451

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116525 \N -260575 1.27e-06 9.23e-07 3.22e-07 1.3e-06 1.81e-07 6.01e-07 1.38e-06 3.28e-07 1.14e-06 3.13e-07 1.4e-06 5.57e-07 1.67e-06 2.55e-07 4.12e-07 5.29e-07 7.73e-07 5.66e-07 6.4e-07 6.33e-07 4.39e-07 8.11e-07 7.63e-07 6.4e-07 2.05e-06 2.99e-07 7.12e-07 5.29e-07 1.04e-06 1.04e-06 5.47e-07 2.98e-07 2.36e-07 6.76e-07 6.04e-07 4.44e-07 7.25e-07 2.78e-07 4.2e-07 3.34e-07 2.82e-07 1.3e-06 1.24e-07 2.06e-07 1.87e-07 9.94e-08 1.8e-07 1.57e-07 1.46e-07
ENSG00000160097 FNDC5 49002 1.05e-05 1.32e-05 2.3e-06 8.87e-06 2.35e-06 5.72e-06 1.45e-05 2.14e-06 1.27e-05 5.88e-06 1.59e-05 6.53e-06 2.06e-05 4.51e-06 3.17e-06 6.74e-06 6.29e-06 9.69e-06 3.07e-06 3.13e-06 6.18e-06 1.04e-05 1.03e-05 3.3e-06 2.05e-05 4.27e-06 6.74e-06 4.83e-06 1.33e-05 9.25e-06 7.73e-06 9.82e-07 1.17e-06 3.54e-06 6.2e-06 2.77e-06 1.84e-06 1.95e-06 2.08e-06 1.26e-06 9.98e-07 1.41e-05 1.64e-06 1.97e-07 7.04e-07 1.81e-06 1.73e-06 7.2e-07 4.55e-07
ENSG00000182866 \N 670245 2.67e-07 1.25e-07 3.69e-08 2.26e-07 9.01e-08 9.76e-08 1.49e-07 5.4e-08 1.41e-07 4.4e-08 1.6e-07 8.36e-08 1.41e-07 6.76e-08 6.17e-08 7.26e-08 3.98e-08 1.18e-07 5.82e-08 4.23e-08 1.13e-07 1.26e-07 1.32e-07 3.03e-08 1.46e-07 1.16e-07 1.06e-07 9.32e-08 1.05e-07 1.12e-07 9.91e-08 2.96e-08 3.66e-08 8.89e-08 3.51e-08 3.14e-08 3.91e-08 8.68e-08 6.86e-08 3.67e-08 5.24e-08 1.31e-07 5.39e-08 1.93e-08 4.92e-08 1.84e-08 1.24e-07 2.05e-09 4.88e-08
ENSG00000220785 \N 679864 2.64e-07 1.19e-07 3.69e-08 2.24e-07 9.01e-08 9.76e-08 1.49e-07 5.37e-08 1.41e-07 4.4e-08 1.6e-07 8.14e-08 1.41e-07 6.76e-08 6.17e-08 7.26e-08 3.94e-08 1.18e-07 5.82e-08 4.16e-08 1.08e-07 1.26e-07 1.32e-07 2.95e-08 1.4e-07 1.16e-07 1.06e-07 9.32e-08 1.05e-07 1.11e-07 9.91e-08 2.93e-08 3.61e-08 8.7e-08 3.71e-08 3.28e-08 4.06e-08 8.76e-08 6.86e-08 3.6e-08 5.44e-08 1.31e-07 5.12e-08 1.89e-08 4.92e-08 1.84e-08 1.24e-07 2.02e-09 4.9e-08
ENSG00000222046 \N 712390 2.64e-07 1.16e-07 3.72e-08 2.09e-07 8.83e-08 1e-07 1.44e-07 5.2e-08 1.4e-07 4.4e-08 1.62e-07 7.78e-08 1.33e-07 6.56e-08 5.99e-08 7.5e-08 3.9e-08 1.14e-07 5.36e-08 4.04e-08 1.04e-07 1.27e-07 1.26e-07 3.49e-08 1.37e-07 1.14e-07 1.08e-07 9.15e-08 1.05e-07 1.12e-07 9.73e-08 3.06e-08 3.35e-08 8.72e-08 2.97e-08 3.2e-08 4.62e-08 8.61e-08 6.37e-08 4.19e-08 4.69e-08 1.35e-07 5.22e-08 1.8e-08 5.19e-08 1.99e-08 1.23e-07 1.96e-09 4.94e-08
ENSG00000222112 RN7SKP16 -415380 3.71e-07 2.56e-07 7.6e-08 4.32e-07 1.07e-07 1.64e-07 3.94e-07 8.11e-08 2.01e-07 1.11e-07 2.84e-07 1.62e-07 3.77e-07 9.48e-08 9.2e-08 9.35e-08 7.3e-08 2.56e-07 9.97e-08 8.86e-08 1.52e-07 1.9e-07 1.89e-07 1.06e-07 4.46e-07 1.82e-07 1.72e-07 1.47e-07 1.58e-07 1.8e-07 1.52e-07 7.12e-08 4.93e-08 1.38e-07 3.34e-07 7.56e-08 1.11e-07 9.58e-08 4.23e-08 2.71e-08 8.55e-08 2e-07 3.55e-08 5.72e-08 8.06e-08 9.12e-09 8.21e-08 3.21e-08 5.61e-08
ENSG00000269967 \N 999643 2.66e-07 1.06e-07 3.31e-08 1.82e-07 9.91e-08 9.32e-08 1.42e-07 5.35e-08 1.37e-07 4.23e-08 1.63e-07 8.02e-08 1.27e-07 6.21e-08 5.44e-08 7.87e-08 4.94e-08 1.07e-07 5.2e-08 3.88e-08 1.06e-07 1.31e-07 1.29e-07 4.53e-08 1.29e-07 1.13e-07 1.1e-07 8.45e-08 9.97e-08 1.09e-07 9.75e-08 4.07e-08 2.74e-08 8.65e-08 8.94e-08 3.97e-08 5.02e-08 9.55e-08 8e-08 3.18e-08 4.6e-08 1.39e-07 3.99e-08 1.43e-08 7.91e-08 1.7e-08 1.26e-07 3.89e-09 4.91e-08