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Genes within 1Mb (chr1:32883240:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 -197756 sc-eQTL 9.99e-01 -0.000404 0.243 0.052 PB L2
ENSG00000025800 KPNA6 775184 sc-eQTL 3.15e-01 0.274 0.271 0.052 PB L2
ENSG00000084623 EIF3I 661312 sc-eQTL 6.65e-01 0.0696 0.16 0.052 PB L2
ENSG00000084652 TXLNA 703565 sc-eQTL 2.49e-01 -0.245 0.212 0.052 PB L2
ENSG00000116478 HDAC1 591157 sc-eQTL 1.67e-01 0.341 0.245 0.052 PB L2
ENSG00000116497 S100PBP 66473 sc-eQTL 5.03e-01 -0.177 0.263 0.052 PB L2
ENSG00000116514 RNF19B -81445 sc-eQTL 9.32e-01 0.0237 0.276 0.052 PB L2
ENSG00000116525 TRIM62 -298819 sc-eQTL 4.43e-01 0.208 0.27 0.052 PB L2
ENSG00000121774 KHDRBS1 869372 sc-eQTL 9.19e-01 -0.0228 0.222 0.052 PB L2
ENSG00000121775 TMEM39B 811209 sc-eQTL 4.01e-01 -0.215 0.255 0.052 PB L2
ENSG00000134684 YARS 65087 sc-eQTL 6.31e-01 0.0936 0.194 0.052 PB L2
ENSG00000134686 PHC2 -547812 sc-eQTL 7.38e-01 0.0907 0.271 0.052 PB L2
ENSG00000160050 CCDC28B 682854 sc-eQTL 5.74e-01 -0.137 0.243 0.052 PB L2
ENSG00000160055 TMEM234 660881 sc-eQTL 3.48e-01 0.263 0.279 0.052 PB L2
ENSG00000160058 BSDC1 488509 sc-eQTL 5.98e-02 0.573 0.301 0.052 PB L2
ENSG00000160094 ZNF362 -373252 sc-eQTL 5.35e-02 0.539 0.276 0.052 PB L2
ENSG00000162520 SYNC 179644 sc-eQTL 1.36e-01 -0.33 0.22 0.052 PB L2
ENSG00000162521 RBBP4 232098 sc-eQTL 9.56e-01 0.0107 0.195 0.052 PB L2
ENSG00000175130 MARCKSL1 547007 sc-eQTL 5.39e-01 -0.124 0.202 0.052 PB L2
ENSG00000176261 ZBTB8OS 232337 sc-eQTL 4.94e-01 0.111 0.162 0.052 PB L2
ENSG00000182866 LCK 632001 sc-eQTL 6.23e-01 -0.125 0.253 0.052 PB L2
ENSG00000184007 PTP4A2 938384 sc-eQTL 2.25e-01 -0.211 0.173 0.052 PB L2
ENSG00000004455 AK2 -197756 sc-eQTL 9.88e-01 0.00344 0.226 0.051 pDC L2
ENSG00000025800 KPNA6 775184 sc-eQTL 8.09e-01 0.0505 0.209 0.051 pDC L2
ENSG00000084623 EIF3I 661312 sc-eQTL 3.80e-02 -0.415 0.198 0.051 pDC L2
ENSG00000084652 TXLNA 703565 sc-eQTL 4.89e-01 -0.143 0.206 0.051 pDC L2
ENSG00000116478 HDAC1 591157 sc-eQTL 8.61e-01 -0.0373 0.213 0.051 pDC L2
ENSG00000116497 S100PBP 66473 sc-eQTL 9.10e-01 0.021 0.186 0.051 pDC L2
ENSG00000116514 RNF19B -81445 sc-eQTL 1.97e-01 0.294 0.226 0.051 pDC L2
ENSG00000116525 TRIM62 -298819 sc-eQTL 6.15e-01 0.114 0.225 0.051 pDC L2
ENSG00000121774 KHDRBS1 869372 sc-eQTL 6.61e-01 0.0811 0.185 0.051 pDC L2
ENSG00000121775 TMEM39B 811209 sc-eQTL 4.26e-01 -0.157 0.197 0.051 pDC L2
ENSG00000134684 YARS 65087 sc-eQTL 8.73e-01 0.0367 0.229 0.051 pDC L2
ENSG00000134686 PHC2 -547812 sc-eQTL 1.65e-01 0.254 0.182 0.051 pDC L2
ENSG00000142920 AZIN2 -197864 sc-eQTL 7.23e-02 -0.284 0.157 0.051 pDC L2
ENSG00000160050 CCDC28B 682854 sc-eQTL 3.87e-01 0.171 0.197 0.051 pDC L2
ENSG00000160055 TMEM234 660881 sc-eQTL 5.03e-02 0.442 0.224 0.051 pDC L2
ENSG00000160058 BSDC1 488509 sc-eQTL 5.54e-01 -0.129 0.218 0.051 pDC L2
ENSG00000160062 ZBTB8A 343813 sc-eQTL 9.14e-01 -0.0209 0.194 0.051 pDC L2
ENSG00000160094 ZNF362 -373252 sc-eQTL 7.47e-01 -0.0639 0.198 0.051 pDC L2
ENSG00000162520 SYNC 179644 sc-eQTL 7.65e-01 0.0613 0.205 0.051 pDC L2
ENSG00000162521 RBBP4 232098 sc-eQTL 8.64e-02 0.255 0.147 0.051 pDC L2
ENSG00000162522 KIAA1522 141410 sc-eQTL 5.27e-01 0.131 0.207 0.051 pDC L2
ENSG00000175130 MARCKSL1 547007 sc-eQTL 9.97e-01 0.000473 0.135 0.051 pDC L2
ENSG00000176261 ZBTB8OS 232337 sc-eQTL 9.68e-01 -0.00869 0.218 0.051 pDC L2
ENSG00000182866 LCK 632001 sc-eQTL 2.69e-01 0.185 0.167 0.051 pDC L2
ENSG00000184007 PTP4A2 938384 sc-eQTL 1.85e-01 -0.234 0.176 0.051 pDC L2
ENSG00000225828 FAM229A 518962 sc-eQTL 9.62e-01 -0.0104 0.216 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000004455 AK2 -197756 eQTL 0.0309 -0.0713 0.033 0.0 0.0 0.0427
ENSG00000116478 HDAC1 591157 eQTL 0.0449 -0.0724 0.036 0.0 0.0 0.0427
ENSG00000142920 AZIN2 -197864 eQTL 0.0204 0.125 0.0539 0.0 0.0 0.0427
ENSG00000162522 KIAA1522 141410 eQTL 0.00478 0.215 0.0759 0.0 0.0 0.0427
ENSG00000182866 LCK 632001 eQTL 0.104 0.0317 0.0195 0.00103 0.0 0.0427
ENSG00000184389 A3GALT2 -437858 eQTL 6.99e-05 0.3 0.0751 0.0 0.0 0.0427
ENSG00000217644 AL355864.1 -96707 eQTL 0.00595 -0.273 0.0991 0.0 0.0 0.0427
ENSG00000220785 MTMR9LP 641620 eQTL 0.0439 -0.206 0.102 0.0 0.0 0.0427
ENSG00000222112 RN7SKP16 -453624 eQTL 0.00711 -0.165 0.0613 0.0 0.0 0.0427
ENSG00000225828 FAM229A 518962 eQTL 0.0145 0.111 0.0453 0.00196 0.0 0.0427
ENSG00000278966 AL031602.1 -90313 eQTL 0.0153 -0.219 0.0901 0.0 0.0 0.0427

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162520 \N 179644 4e-06 4.67e-06 7.11e-07 2.89e-06 1.59e-06 1.55e-06 3.83e-06 1.09e-06 5.09e-06 2.67e-06 4.69e-06 3.43e-06 7.63e-06 2.25e-06 1.43e-06 3.81e-06 2.06e-06 2.94e-06 1.55e-06 1.12e-06 2.71e-06 4.87e-06 3.84e-06 1.48e-06 5.15e-06 1.72e-06 2.35e-06 1.62e-06 4.34e-06 3.38e-06 2.54e-06 5.03e-07 5.87e-07 1.44e-06 2e-06 1.13e-06 1.07e-06 4.72e-07 8.5e-07 4.07e-07 5.44e-07 5.26e-06 5.08e-07 1.64e-07 7.68e-07 1.16e-06 1.03e-06 6.84e-07 6.17e-07
ENSG00000162522 KIAA1522 141410 4.58e-06 5.68e-06 7.59e-07 3.51e-06 1.84e-06 1.52e-06 7.49e-06 1.55e-06 4.86e-06 3.72e-06 7.57e-06 3.41e-06 9.39e-06 2.13e-06 1.01e-06 4.87e-06 2.24e-06 3.84e-06 1.87e-06 1.76e-06 3.41e-06 6.81e-06 4.87e-06 1.99e-06 8.57e-06 2.21e-06 3.62e-06 2.47e-06 5.95e-06 4.38e-06 3.09e-06 8.22e-07 8.08e-07 2.43e-06 2.01e-06 2.11e-06 1.27e-06 1.03e-06 1.41e-06 7.61e-07 8.22e-07 7.45e-06 8.57e-07 1.97e-07 6.99e-07 1.06e-06 1.09e-06 6.99e-07 5.09e-07
ENSG00000217644 AL355864.1 -96707 7.12e-06 9.59e-06 1.33e-06 5.52e-06 2.58e-06 4.14e-06 1.02e-05 2.18e-06 9.7e-06 5.45e-06 1.16e-05 5.64e-06 1.36e-05 3.92e-06 2.73e-06 6.6e-06 3.83e-06 6.85e-06 2.6e-06 2.77e-06 5.71e-06 9.34e-06 7.64e-06 3.24e-06 1.3e-05 3.85e-06 5.48e-06 4.61e-06 9.57e-06 7.58e-06 5.24e-06 9.82e-07 1.21e-06 3.31e-06 4.09e-06 2.62e-06 1.91e-06 1.95e-06 2.19e-06 1.02e-06 9.58e-07 1.17e-05 1.49e-06 2.62e-07 8.46e-07 1.78e-06 1.86e-06 6.86e-07 4.53e-07
ENSG00000278966 AL031602.1 -90313 7.6e-06 9.61e-06 1.43e-06 6.11e-06 2.34e-06 4.22e-06 1.06e-05 2.14e-06 9.93e-06 5.57e-06 1.24e-05 5.9e-06 1.48e-05 3.74e-06 3.01e-06 6.75e-06 4.11e-06 7.6e-06 2.82e-06 2.81e-06 6.14e-06 9.86e-06 8.65e-06 3.3e-06 1.39e-05 4.41e-06 6.12e-06 4.8e-06 1.02e-05 7.86e-06 5.62e-06 1.09e-06 1.12e-06 3.5e-06 4.6e-06 2.87e-06 1.79e-06 1.93e-06 2.15e-06 1e-06 9.49e-07 1.25e-05 1.4e-06 2.8e-07 9.48e-07 1.75e-06 1.93e-06 6.86e-07 4.56e-07