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Genes within 1Mb (chr1:32821501:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 -259495 sc-eQTL 4.41e-01 -0.158 0.204 0.054 cDC L2
ENSG00000025800 KPNA6 713445 sc-eQTL 7.28e-01 -0.0767 0.22 0.054 cDC L2
ENSG00000084623 EIF3I 599573 sc-eQTL 3.83e-01 0.155 0.177 0.054 cDC L2
ENSG00000084652 TXLNA 641826 sc-eQTL 5.98e-03 -0.628 0.226 0.054 cDC L2
ENSG00000116478 HDAC1 529418 sc-eQTL 2.21e-01 0.247 0.201 0.054 cDC L2
ENSG00000116497 S100PBP 4734 sc-eQTL 2.35e-01 0.257 0.216 0.054 cDC L2
ENSG00000116514 RNF19B -143184 sc-eQTL 6.95e-01 -0.0735 0.187 0.054 cDC L2
ENSG00000116525 TRIM62 -360558 sc-eQTL 4.78e-01 -0.151 0.212 0.054 cDC L2
ENSG00000121774 KHDRBS1 807633 sc-eQTL 7.67e-02 0.293 0.165 0.054 cDC L2
ENSG00000121775 TMEM39B 749470 sc-eQTL 3.77e-01 -0.175 0.197 0.054 cDC L2
ENSG00000134684 YARS 3348 sc-eQTL 4.27e-01 -0.174 0.218 0.054 cDC L2
ENSG00000134686 PHC2 -609551 sc-eQTL 3.94e-01 -0.125 0.146 0.054 cDC L2
ENSG00000142920 AZIN2 -259603 sc-eQTL 2.77e-01 -0.125 0.115 0.054 cDC L2
ENSG00000160050 CCDC28B 621115 sc-eQTL 7.04e-01 -0.0833 0.219 0.054 cDC L2
ENSG00000160055 TMEM234 599142 sc-eQTL 6.30e-01 0.0978 0.202 0.054 cDC L2
ENSG00000160058 BSDC1 426770 sc-eQTL 4.79e-01 0.157 0.221 0.054 cDC L2
ENSG00000160062 ZBTB8A 282074 sc-eQTL 2.19e-01 -0.206 0.167 0.054 cDC L2
ENSG00000160094 ZNF362 -434991 sc-eQTL 1.47e-01 0.291 0.2 0.054 cDC L2
ENSG00000162520 SYNC 117905 sc-eQTL 1.48e-01 -0.302 0.208 0.054 cDC L2
ENSG00000162521 RBBP4 170359 sc-eQTL 9.72e-01 -0.00632 0.181 0.054 cDC L2
ENSG00000162522 KIAA1522 79671 sc-eQTL 6.11e-01 -0.103 0.202 0.054 cDC L2
ENSG00000175130 MARCKSL1 485268 sc-eQTL 5.27e-01 0.0882 0.139 0.054 cDC L2
ENSG00000176261 ZBTB8OS 170598 sc-eQTL 4.08e-01 -0.16 0.194 0.054 cDC L2
ENSG00000182866 LCK 570262 sc-eQTL 4.92e-02 -0.304 0.154 0.054 cDC L2
ENSG00000184007 PTP4A2 876645 sc-eQTL 1.02e-01 0.273 0.166 0.054 cDC L2
ENSG00000225828 FAM229A 457223 sc-eQTL 3.11e-01 -0.208 0.205 0.054 cDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000084623 EIF3I 599573 eQTL 0.0394 0.0765 0.0371 0.0 0.0 0.0397
ENSG00000116497 S100PBP 4734 eQTL 0.00489 0.0932 0.033 0.0 0.0 0.0397
ENSG00000134684 YARS 3348 eQTL 0.0196 0.0906 0.0388 0.0 0.0 0.0397
ENSG00000160094 ZNF362 -434991 eQTL 0.0227 -0.101 0.0443 0.0 0.0 0.0397
ENSG00000162522 KIAA1522 79671 eQTL 0.000535 0.258 0.0742 0.0 0.0 0.0397

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116497 S100PBP 4734 3.59e-05 3.46e-05 6.85e-06 1.7e-05 6.77e-06 1.72e-05 4.97e-05 6.11e-06 3.72e-05 1.83e-05 4.6e-05 2.12e-05 5.48e-05 1.6e-05 8.24e-06 2.29e-05 2.01e-05 2.95e-05 9.6e-06 8.59e-06 1.97e-05 3.73e-05 3.5e-05 1.15e-05 5.3e-05 9.97e-06 1.74e-05 1.53e-05 3.53e-05 3.48e-05 2.51e-05 2.34e-06 4.12e-06 8.17e-06 1.39e-05 7.75e-06 4.25e-06 3.84e-06 6.44e-06 4e-06 1.91e-06 4e-05 4.22e-06 5.28e-07 3.03e-06 5.29e-06 4.77e-06 2.28e-06 1.74e-06
ENSG00000116514 \N -143184 5.58e-06 7.73e-06 6.63e-07 3.6e-06 1.59e-06 1.59e-06 7.23e-06 1.25e-06 4.66e-06 3.09e-06 7.78e-06 2.9e-06 9.37e-06 2.13e-06 9.3e-07 3.84e-06 2.51e-06 4.01e-06 1.5e-06 1.44e-06 2.82e-06 5.44e-06 4.6e-06 1.48e-06 8.55e-06 2.12e-06 3.09e-06 1.78e-06 5e-06 4.67e-06 3.32e-06 4.51e-07 7.66e-07 1.65e-06 1.95e-06 1.17e-06 9.95e-07 5.07e-07 8.75e-07 6.39e-07 5.44e-07 7.03e-06 6.7e-07 1.61e-07 6.11e-07 1.1e-06 1.13e-06 7.43e-07 4.83e-07
ENSG00000121775 \N 749470 3.71e-07 2.17e-07 7.92e-08 2.87e-07 1.07e-07 1.26e-07 2.95e-07 7.46e-08 2.01e-07 1.28e-07 2.18e-07 1.62e-07 3.04e-07 8.42e-08 1.07e-07 1.01e-07 7.3e-08 2.66e-07 9.69e-08 7.49e-08 1.59e-07 2.06e-07 1.81e-07 4.27e-08 2.74e-07 1.94e-07 1.74e-07 1.44e-07 1.47e-07 1.8e-07 1.59e-07 6.78e-08 6.08e-08 9.98e-08 1.83e-07 5.7e-08 6.87e-08 7.75e-08 4.82e-08 7.77e-08 3.17e-08 1.6e-07 3.09e-08 1.98e-08 7.93e-08 1.37e-08 8.94e-08 1.15e-08 4.82e-08
ENSG00000162522 KIAA1522 79671 9.21e-06 1.21e-05 1.29e-06 6.16e-06 2.17e-06 4.34e-06 1.06e-05 2.12e-06 1e-05 5.49e-06 1.31e-05 5.47e-06 1.59e-05 3.68e-06 2.83e-06 6.52e-06 4.66e-06 7.14e-06 2.7e-06 2.85e-06 5.1e-06 9.17e-06 7.38e-06 3.03e-06 1.39e-05 3.85e-06 5.27e-06 3.89e-06 9.77e-06 7.9e-06 6.36e-06 8.65e-07 1.23e-06 2.85e-06 4.54e-06 2.36e-06 1.73e-06 1.95e-06 1.98e-06 9.84e-07 8.99e-07 1.25e-05 1.47e-06 1.35e-07 7.64e-07 1.73e-06 1.31e-06 7.48e-07 4.34e-07