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Genes within 1Mb (chr1:32654684:TTTG:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 -426312 sc-eQTL 8.33e-01 -0.0501 0.237 0.051 B_Activated L2
ENSG00000025800 KPNA6 546628 sc-eQTL 4.68e-01 -0.175 0.24 0.051 B_Activated L2
ENSG00000084623 EIF3I 432756 sc-eQTL 5.25e-01 0.144 0.226 0.051 B_Activated L2
ENSG00000084652 TXLNA 475009 sc-eQTL 9.15e-01 0.0241 0.226 0.051 B_Activated L2
ENSG00000116478 HDAC1 362601 sc-eQTL 3.60e-01 -0.197 0.215 0.051 B_Activated L2
ENSG00000116497 S100PBP -162083 sc-eQTL 5.68e-01 0.128 0.224 0.051 B_Activated L2
ENSG00000116514 RNF19B -310001 sc-eQTL 1.83e-01 0.299 0.224 0.051 B_Activated L2
ENSG00000116525 TRIM62 -527375 sc-eQTL 8.66e-01 -0.037 0.218 0.051 B_Activated L2
ENSG00000121774 KHDRBS1 640816 sc-eQTL 8.62e-01 0.0374 0.214 0.051 B_Activated L2
ENSG00000121775 TMEM39B 582653 sc-eQTL 6.80e-01 -0.093 0.225 0.051 B_Activated L2
ENSG00000134684 YARS -163469 sc-eQTL 6.88e-01 -0.0942 0.234 0.051 B_Activated L2
ENSG00000134686 PHC2 -776368 sc-eQTL 9.22e-01 0.0214 0.218 0.051 B_Activated L2
ENSG00000160050 CCDC28B 454298 sc-eQTL 6.29e-01 -0.0979 0.202 0.051 B_Activated L2
ENSG00000160055 TMEM234 432325 sc-eQTL 1.03e-01 -0.361 0.221 0.051 B_Activated L2
ENSG00000160058 BSDC1 259953 sc-eQTL 1.80e-01 0.322 0.24 0.051 B_Activated L2
ENSG00000160094 ZNF362 -601808 sc-eQTL 2.90e-01 -0.243 0.229 0.051 B_Activated L2
ENSG00000162520 SYNC -48912 sc-eQTL 3.78e-01 -0.209 0.236 0.051 B_Activated L2
ENSG00000162521 RBBP4 3542 sc-eQTL 6.85e-01 -0.0929 0.229 0.051 B_Activated L2
ENSG00000175130 MARCKSL1 318451 sc-eQTL 5.58e-01 -0.123 0.21 0.051 B_Activated L2
ENSG00000176261 ZBTB8OS 3781 sc-eQTL 2.19e-01 -0.267 0.216 0.051 B_Activated L2
ENSG00000182866 LCK 403445 sc-eQTL 6.65e-01 -0.0683 0.157 0.051 B_Activated L2
ENSG00000184007 PTP4A2 709828 sc-eQTL 6.83e-01 0.068 0.166 0.051 B_Activated L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000004455 AK2 -426312 pQTL 0.0058 -0.081 0.0293 0.0 0.0014 0.0462
ENSG00000084652 TXLNA 475009 eQTL 0.0255 -0.104 0.0467 0.0 0.0 0.0447
ENSG00000134684 YARS -163469 eQTL 0.0342 0.0843 0.0398 0.0 0.0 0.0447
ENSG00000160051 IQCC 449023 eQTL 0.0154 0.118 0.0484 0.00181 0.0 0.0447
ENSG00000162522 KIAA1522 -87146 eQTL 0.0223 0.175 0.0764 0.0 0.0 0.0447
ENSG00000220785 MTMR9LP 413064 eQTL 0.0154 -0.249 0.103 0.0 0.0 0.0447
ENSG00000222112 RN7SKP16 -682180 eQTL 0.0143 0.151 0.0616 0.00132 0.0 0.0447
ENSG00000269967 AL136115.2 732843 eQTL 0.0418 -0.139 0.0681 0.00145 0.0 0.0447
ENSG00000279179 AL662907.2 -508167 eQTL 0.0216 0.109 0.0475 0.0 0.0 0.0447

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina