Genes within 1Mb (chr1:32527784:T:C):

View on , UCSC , GTEx , gnomAD


Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 -553212 sc-eQTL 6.89e-02 0.359 0.196 0.051 pDC L2
ENSG00000025800 KPNA6 419728 sc-eQTL 3.44e-01 -0.173 0.183 0.051 pDC L2
ENSG00000084623 EIF3I 305856 sc-eQTL 8.46e-01 0.0343 0.176 0.051 pDC L2
ENSG00000084652 TXLNA 348109 sc-eQTL 1.69e-01 -0.247 0.179 0.051 pDC L2
ENSG00000116478 HDAC1 235701 sc-eQTL 5.90e-01 0.1 0.186 0.051 pDC L2
ENSG00000116497 S100PBP -288983 sc-eQTL 1.37e-01 -0.243 0.162 0.051 pDC L2
ENSG00000116514 RNF19B -436901 sc-eQTL 8.85e-01 0.0288 0.199 0.051 pDC L2
ENSG00000116525 TRIM62 -654275 sc-eQTL 9.77e-01 -0.00567 0.198 0.051 pDC L2
ENSG00000121774 KHDRBS1 513916 sc-eQTL 1.81e-01 -0.216 0.161 0.051 pDC L2
ENSG00000121775 TMEM39B 455753 sc-eQTL 1.49e-01 -0.249 0.171 0.051 pDC L2
ENSG00000134684 YARS -290369 sc-eQTL 8.22e-01 0.0451 0.2 0.051 pDC L2
ENSG00000134686 PHC2 -903268 sc-eQTL 2.49e-01 -0.185 0.16 0.051 pDC L2
ENSG00000142920 AZIN2 -553320 sc-eQTL 5.00e-01 -0.0937 0.139 0.051 pDC L2
ENSG00000160050 CCDC28B 327398 sc-eQTL 1.39e-01 0.255 0.172 0.051 pDC L2
ENSG00000160055 TMEM234 305425 sc-eQTL 9.02e-01 0.0245 0.199 0.051 pDC L2
ENSG00000160058 BSDC1 133053 sc-eQTL 4.86e-01 -0.133 0.191 0.051 pDC L2
ENSG00000160062 ZBTB8A -11643 sc-eQTL 9.37e-01 -0.0135 0.17 0.051 pDC L2
ENSG00000160094 ZNF362 -728708 sc-eQTL 2.26e-01 0.209 0.172 0.051 pDC L2
ENSG00000162517 PEF1 882888 sc-eQTL 1.71e-01 0.283 0.206 0.051 pDC L2
ENSG00000162520 SYNC -175812 sc-eQTL 4.09e-02 -0.364 0.177 0.051 pDC L2
ENSG00000162521 RBBP4 -123358 sc-eQTL 4.59e-01 -0.0966 0.13 0.051 pDC L2
ENSG00000162522 KIAA1522 -214046 sc-eQTL 3.04e-01 -0.187 0.181 0.051 pDC L2
ENSG00000175130 MARCKSL1 191551 sc-eQTL 5.22e-01 -0.0758 0.118 0.051 pDC L2
ENSG00000176261 ZBTB8OS -123119 sc-eQTL 6.08e-01 -0.0977 0.19 0.051 pDC L2
ENSG00000182866 LCK 276545 sc-eQTL 3.08e-01 -0.15 0.146 0.051 pDC L2
ENSG00000184007 PTP4A2 582928 sc-eQTL 3.06e-01 -0.159 0.155 0.051 pDC L2
ENSG00000225828 FAM229A 163506 sc-eQTL 1.00e+00 -8.44e-05 0.189 0.051 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116497 S100PBP -288983 eQTL 0.00805 -0.0824 0.031 0.0 0.0 0.0412
ENSG00000134684 YARS -290369 eQTL 0.0456 -0.0729 0.0364 0.0 0.0 0.0412
ENSG00000134686 PHC2 -903268 eQTL 0.0102 0.0501 0.0195 0.00222 0.0 0.0412
ENSG00000162522 KIAA1522 -214046 eQTL 0.0339 -0.149 0.0699 0.0 0.0 0.0412
ENSG00000183615 FAM167B 280562 eQTL 0.0022 0.258 0.0839 0.0 0.0 0.0412
ENSG00000220785 MTMR9LP 286164 eQTL 3.26e-06 0.436 0.0932 0.0 0.0 0.0412
ENSG00000222046 DCDC2B 318690 eQTL 0.0149 0.148 0.0607 0.0 0.0 0.0412
ENSG00000278966 AL031602.1 -445769 eQTL 0.0198 -0.194 0.0829 0.0 0.0 0.0412


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116525 \N -654275 2.91e-07 1.56e-07 6.26e-08 2.2e-07 1.02e-07 8.4e-08 1.9e-07 5.82e-08 1.66e-07 9.72e-08 1.66e-07 1.46e-07 2.05e-07 8.13e-08 5.36e-08 9.01e-08 4.18e-08 1.64e-07 7.16e-08 5.87e-08 1.18e-07 1.47e-07 1.58e-07 3.4e-08 2.02e-07 1.43e-07 1.22e-07 1.17e-07 1.31e-07 1.06e-07 1.09e-07 3.68e-08 3.56e-08 9.8e-08 3.36e-08 2.74e-08 3.91e-08 7.51e-08 6.3e-08 5.35e-08 5.53e-08 1.52e-07 3.35e-08 1.08e-08 3.07e-08 1.19e-08 7.12e-08 2.23e-09 4.72e-08
ENSG00000142920 \N -553320 3.53e-07 2.5e-07 6.41e-08 2.43e-07 1.07e-07 1.26e-07 2.74e-07 7.56e-08 2.01e-07 1.37e-07 2.38e-07 2.04e-07 3.04e-07 8.66e-08 7.79e-08 1.14e-07 5.73e-08 2.21e-07 8e-08 8.69e-08 1.34e-07 2.09e-07 1.89e-07 3.67e-08 2.86e-07 1.9e-07 1.39e-07 1.61e-07 1.36e-07 1.59e-07 1.39e-07 5.32e-08 4.87e-08 9.98e-08 9.25e-08 4.86e-08 5.71e-08 5.53e-08 5.78e-08 8.06e-08 4.72e-08 1.79e-07 3.37e-08 2.06e-08 4.36e-08 1.03e-08 9.84e-08 2.8e-09 4.82e-08
ENSG00000183615 FAM167B 280562 1.26e-06 1e-06 3.3e-07 9.74e-07 3.48e-07 6.06e-07 1.34e-06 3.98e-07 1.39e-06 5.15e-07 1.76e-06 7.84e-07 1.98e-06 2.79e-07 5.28e-07 9.19e-07 8e-07 6.25e-07 8.01e-07 6.34e-07 6.56e-07 1.6e-06 8.76e-07 6.51e-07 2.1e-06 5.15e-07 9.09e-07 8.09e-07 1.25e-06 1.22e-06 6.29e-07 2.06e-07 1.99e-07 7.03e-07 5.87e-07 4.4e-07 5.93e-07 2.71e-07 3.2e-07 3.24e-07 2.8e-07 1.52e-06 1.24e-07 1.38e-07 2.24e-07 1.38e-07 2.56e-07 8.15e-08 1.91e-07
ENSG00000220785 MTMR9LP 286164 1.33e-06 9.59e-07 3.41e-07 7.96e-07 3.44e-07 6.38e-07 1.26e-06 3.75e-07 1.38e-06 4.78e-07 1.65e-06 7.48e-07 2e-06 2.7e-07 5.5e-07 9.17e-07 8.01e-07 5.88e-07 7.52e-07 6.55e-07 6.12e-07 1.42e-06 8.96e-07 6.42e-07 2.05e-06 4.17e-07 9.05e-07 7.19e-07 1.18e-06 1.23e-06 6.16e-07 1.9e-07 2.3e-07 6.68e-07 6.22e-07 4.5e-07 5.31e-07 2.54e-07 2.9e-07 2.66e-07 3.01e-07 1.53e-06 1.09e-07 1.14e-07 1.79e-07 1.24e-07 2.39e-07 5.95e-08 1.58e-07
ENSG00000222046 DCDC2B 318690 1.22e-06 9.44e-07 2.95e-07 4.15e-07 2.66e-07 4.82e-07 9.43e-07 3.31e-07 1.12e-06 3.78e-07 1.35e-06 5.98e-07 1.54e-06 2.54e-07 4.28e-07 7.13e-07 7.76e-07 5.67e-07 4.82e-07 6.11e-07 3.61e-07 1.04e-06 7.39e-07 5.01e-07 1.85e-06 3.47e-07 6.81e-07 6.89e-07 8.4e-07 9.45e-07 5.37e-07 7.28e-08 1.95e-07 4.16e-07 4.17e-07 3.91e-07 4.12e-07 1.61e-07 1.49e-07 8.76e-08 2.12e-07 1.26e-06 5.66e-08 6.46e-08 1.81e-07 8.76e-08 2.27e-07 7.69e-08 1.08e-07