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Genes within 1Mb (chr1:32435471:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 -645525 sc-eQTL 3.08e-01 0.187 0.183 0.05 CD4_CTL L2
ENSG00000025800 KPNA6 327415 sc-eQTL 9.05e-01 -0.0242 0.202 0.05 CD4_CTL L2
ENSG00000084623 EIF3I 213543 sc-eQTL 8.10e-02 -0.298 0.17 0.05 CD4_CTL L2
ENSG00000084652 TXLNA 255796 sc-eQTL 9.52e-01 0.011 0.182 0.05 CD4_CTL L2
ENSG00000116478 HDAC1 143388 sc-eQTL 9.91e-01 -0.00207 0.178 0.05 CD4_CTL L2
ENSG00000116497 S100PBP -381296 sc-eQTL 8.41e-02 -0.317 0.182 0.05 CD4_CTL L2
ENSG00000116514 RNF19B -529214 sc-eQTL 7.42e-01 -0.0586 0.178 0.05 CD4_CTL L2
ENSG00000116525 TRIM62 -746588 sc-eQTL 3.58e-02 -0.376 0.178 0.05 CD4_CTL L2
ENSG00000121774 KHDRBS1 421603 sc-eQTL 4.30e-02 0.314 0.154 0.05 CD4_CTL L2
ENSG00000121775 TMEM39B 363440 sc-eQTL 2.94e-01 0.202 0.192 0.05 CD4_CTL L2
ENSG00000134684 YARS -382682 sc-eQTL 9.58e-02 0.298 0.178 0.05 CD4_CTL L2
ENSG00000134686 PHC2 -995581 sc-eQTL 2.53e-01 -0.194 0.17 0.05 CD4_CTL L2
ENSG00000142920 AZIN2 -645633 sc-eQTL 8.82e-01 -0.026 0.175 0.05 CD4_CTL L2
ENSG00000160050 CCDC28B 235085 sc-eQTL 7.90e-01 0.0484 0.182 0.05 CD4_CTL L2
ENSG00000160055 TMEM234 213112 sc-eQTL 8.83e-01 0.0288 0.196 0.05 CD4_CTL L2
ENSG00000160058 BSDC1 40740 sc-eQTL 5.00e-01 -0.127 0.188 0.05 CD4_CTL L2
ENSG00000160094 ZNF362 -821021 sc-eQTL 1.04e-01 -0.293 0.179 0.05 CD4_CTL L2
ENSG00000162517 PEF1 790575 sc-eQTL 2.38e-02 0.376 0.165 0.05 CD4_CTL L2
ENSG00000162520 SYNC -268125 sc-eQTL 5.70e-01 0.11 0.194 0.05 CD4_CTL L2
ENSG00000162521 RBBP4 -215671 sc-eQTL 7.37e-02 -0.311 0.173 0.05 CD4_CTL L2
ENSG00000175130 MARCKSL1 99238 sc-eQTL 3.35e-01 0.177 0.183 0.05 CD4_CTL L2
ENSG00000176261 ZBTB8OS -215432 sc-eQTL 7.13e-01 0.0687 0.187 0.05 CD4_CTL L2
ENSG00000182866 LCK 184232 sc-eQTL 4.70e-01 -0.0932 0.129 0.05 CD4_CTL L2
ENSG00000184007 PTP4A2 490615 sc-eQTL 8.38e-01 -0.0212 0.104 0.05 CD4_CTL L2
ENSG00000225828 FAM229A 71193 sc-eQTL 9.53e-01 -0.0101 0.171 0.05 CD4_CTL L2
ENSG00000004455 AK2 -645525 sc-eQTL 7.38e-01 0.0645 0.193 0.05 NK_HLA L2
ENSG00000025800 KPNA6 327415 sc-eQTL 3.30e-01 -0.194 0.199 0.05 NK_HLA L2
ENSG00000084623 EIF3I 213543 sc-eQTL 9.12e-01 -0.0223 0.202 0.05 NK_HLA L2
ENSG00000084652 TXLNA 255796 sc-eQTL 8.62e-01 -0.0324 0.187 0.05 NK_HLA L2
ENSG00000116478 HDAC1 143388 sc-eQTL 8.91e-01 0.0247 0.18 0.05 NK_HLA L2
ENSG00000116497 S100PBP -381296 sc-eQTL 9.79e-01 -0.00496 0.185 0.05 NK_HLA L2
ENSG00000116514 RNF19B -529214 sc-eQTL 8.04e-02 -0.323 0.184 0.05 NK_HLA L2
ENSG00000116525 TRIM62 -746588 sc-eQTL 6.26e-01 0.0953 0.195 0.05 NK_HLA L2
ENSG00000121753 ADGRB2 670578 sc-eQTL 9.33e-01 -0.0137 0.163 0.05 NK_HLA L2
ENSG00000121774 KHDRBS1 421603 sc-eQTL 7.62e-01 0.0512 0.169 0.05 NK_HLA L2
ENSG00000121775 TMEM39B 363440 sc-eQTL 9.88e-01 -0.00299 0.203 0.05 NK_HLA L2
ENSG00000134684 YARS -382682 sc-eQTL 3.51e-01 -0.192 0.205 0.05 NK_HLA L2
ENSG00000134686 PHC2 -995581 sc-eQTL 5.34e-01 0.106 0.17 0.05 NK_HLA L2
ENSG00000160050 CCDC28B 235085 sc-eQTL 4.08e-01 0.143 0.172 0.05 NK_HLA L2
ENSG00000160055 TMEM234 213112 sc-eQTL 4.77e-01 -0.14 0.196 0.05 NK_HLA L2
ENSG00000160058 BSDC1 40740 sc-eQTL 1.83e-02 0.47 0.198 0.05 NK_HLA L2
ENSG00000160094 ZNF362 -821021 sc-eQTL 2.03e-01 -0.248 0.194 0.05 NK_HLA L2
ENSG00000162517 PEF1 790575 sc-eQTL 3.60e-01 0.176 0.192 0.05 NK_HLA L2
ENSG00000162520 SYNC -268125 sc-eQTL 4.13e-01 -0.162 0.197 0.05 NK_HLA L2
ENSG00000162521 RBBP4 -215671 sc-eQTL 1.88e-02 -0.453 0.191 0.05 NK_HLA L2
ENSG00000175130 MARCKSL1 99238 sc-eQTL 7.79e-01 -0.042 0.149 0.05 NK_HLA L2
ENSG00000176261 ZBTB8OS -215432 sc-eQTL 7.47e-01 -0.0652 0.202 0.05 NK_HLA L2
ENSG00000182866 LCK 184232 sc-eQTL 4.76e-02 0.27 0.136 0.05 NK_HLA L2
ENSG00000184007 PTP4A2 490615 sc-eQTL 8.35e-01 0.0321 0.154 0.05 NK_HLA L2
ENSG00000004455 AK2 -645525 sc-eQTL 1.79e-02 0.436 0.183 0.051 cDC L2
ENSG00000025800 KPNA6 327415 sc-eQTL 6.89e-01 0.08 0.2 0.051 cDC L2
ENSG00000084623 EIF3I 213543 sc-eQTL 3.64e-01 -0.146 0.16 0.051 cDC L2
ENSG00000084652 TXLNA 255796 sc-eQTL 4.45e-01 0.159 0.208 0.051 cDC L2
ENSG00000116478 HDAC1 143388 sc-eQTL 7.79e-01 0.0514 0.183 0.051 cDC L2
ENSG00000116497 S100PBP -381296 sc-eQTL 2.21e-01 0.24 0.195 0.051 cDC L2
ENSG00000116514 RNF19B -529214 sc-eQTL 3.58e-01 0.156 0.169 0.051 cDC L2
ENSG00000116525 TRIM62 -746588 sc-eQTL 5.87e-01 0.105 0.192 0.051 cDC L2
ENSG00000121774 KHDRBS1 421603 sc-eQTL 8.69e-01 0.0249 0.151 0.051 cDC L2
ENSG00000121775 TMEM39B 363440 sc-eQTL 5.86e-01 -0.0977 0.179 0.051 cDC L2
ENSG00000134684 YARS -382682 sc-eQTL 7.72e-01 -0.0576 0.198 0.051 cDC L2
ENSG00000134686 PHC2 -995581 sc-eQTL 1.54e-01 -0.188 0.132 0.051 cDC L2
ENSG00000142920 AZIN2 -645633 sc-eQTL 3.79e-01 0.0917 0.104 0.051 cDC L2
ENSG00000160050 CCDC28B 235085 sc-eQTL 5.04e-01 0.133 0.198 0.051 cDC L2
ENSG00000160055 TMEM234 213112 sc-eQTL 4.44e-01 -0.141 0.183 0.051 cDC L2
ENSG00000160058 BSDC1 40740 sc-eQTL 7.11e-01 -0.0743 0.2 0.051 cDC L2
ENSG00000160062 ZBTB8A -103956 sc-eQTL 8.01e-02 -0.264 0.15 0.051 cDC L2
ENSG00000160094 ZNF362 -821021 sc-eQTL 3.56e-01 -0.168 0.181 0.051 cDC L2
ENSG00000162517 PEF1 790575 sc-eQTL 4.54e-03 0.508 0.177 0.051 cDC L2
ENSG00000162520 SYNC -268125 sc-eQTL 9.72e-01 -0.00658 0.19 0.051 cDC L2
ENSG00000162521 RBBP4 -215671 sc-eQTL 2.28e-01 -0.197 0.163 0.051 cDC L2
ENSG00000162522 KIAA1522 -306359 sc-eQTL 4.58e-03 -0.515 0.179 0.051 cDC L2
ENSG00000175130 MARCKSL1 99238 sc-eQTL 7.80e-02 -0.222 0.125 0.051 cDC L2
ENSG00000176261 ZBTB8OS -215432 sc-eQTL 9.52e-01 -0.0107 0.176 0.051 cDC L2
ENSG00000182866 LCK 184232 sc-eQTL 9.97e-01 0.000589 0.141 0.051 cDC L2
ENSG00000184007 PTP4A2 490615 sc-eQTL 7.39e-02 -0.27 0.15 0.051 cDC L2
ENSG00000225828 FAM229A 71193 sc-eQTL 8.52e-01 -0.0348 0.186 0.051 cDC L2
ENSG00000284543 LINC01226 929245 sc-eQTL 8.10e-01 0.0379 0.158 0.051 cDC L2
ENSG00000004455 AK2 -645525 sc-eQTL 4.96e-02 0.376 0.19 0.056 pDC L2
ENSG00000025800 KPNA6 327415 sc-eQTL 3.40e-01 -0.17 0.177 0.056 pDC L2
ENSG00000084623 EIF3I 213543 sc-eQTL 5.43e-01 -0.104 0.171 0.056 pDC L2
ENSG00000084652 TXLNA 255796 sc-eQTL 1.66e-01 -0.242 0.174 0.056 pDC L2
ENSG00000116478 HDAC1 143388 sc-eQTL 5.58e-01 -0.106 0.18 0.056 pDC L2
ENSG00000116497 S100PBP -381296 sc-eQTL 5.78e-01 -0.0883 0.158 0.056 pDC L2
ENSG00000116514 RNF19B -529214 sc-eQTL 4.51e-01 -0.146 0.193 0.056 pDC L2
ENSG00000116525 TRIM62 -746588 sc-eQTL 9.82e-01 -0.00443 0.192 0.056 pDC L2
ENSG00000121774 KHDRBS1 421603 sc-eQTL 5.11e-01 -0.103 0.157 0.056 pDC L2
ENSG00000121775 TMEM39B 363440 sc-eQTL 2.71e-01 -0.184 0.167 0.056 pDC L2
ENSG00000134684 YARS -382682 sc-eQTL 1.82e-01 0.259 0.193 0.056 pDC L2
ENSG00000134686 PHC2 -995581 sc-eQTL 8.64e-01 0.0267 0.156 0.056 pDC L2
ENSG00000142920 AZIN2 -645633 sc-eQTL 9.55e-01 0.00764 0.135 0.056 pDC L2
ENSG00000160050 CCDC28B 235085 sc-eQTL 7.59e-03 0.444 0.164 0.056 pDC L2
ENSG00000160055 TMEM234 213112 sc-eQTL 7.90e-01 0.0515 0.193 0.056 pDC L2
ENSG00000160058 BSDC1 40740 sc-eQTL 9.31e-01 -0.0161 0.185 0.056 pDC L2
ENSG00000160062 ZBTB8A -103956 sc-eQTL 1.93e-01 0.214 0.164 0.056 pDC L2
ENSG00000160094 ZNF362 -821021 sc-eQTL 4.91e-01 0.116 0.168 0.056 pDC L2
ENSG00000162517 PEF1 790575 sc-eQTL 3.74e-01 0.178 0.2 0.056 pDC L2
ENSG00000162520 SYNC -268125 sc-eQTL 4.91e-01 -0.12 0.174 0.056 pDC L2
ENSG00000162521 RBBP4 -215671 sc-eQTL 6.80e-01 -0.0523 0.126 0.056 pDC L2
ENSG00000162522 KIAA1522 -306359 sc-eQTL 6.79e-01 -0.0732 0.176 0.056 pDC L2
ENSG00000175130 MARCKSL1 99238 sc-eQTL 7.62e-01 0.0349 0.115 0.056 pDC L2
ENSG00000176261 ZBTB8OS -215432 sc-eQTL 8.68e-01 -0.0307 0.185 0.056 pDC L2
ENSG00000182866 LCK 184232 sc-eQTL 7.20e-01 -0.0511 0.142 0.056 pDC L2
ENSG00000184007 PTP4A2 490615 sc-eQTL 3.82e-01 -0.132 0.15 0.056 pDC L2
ENSG00000225828 FAM229A 71193 sc-eQTL 2.84e-01 -0.196 0.183 0.056 pDC L2
ENSG00000284543 LINC01226 929245 sc-eQTL 8.60e-01 0.0257 0.146 0.056 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116497 S100PBP -381296 eQTL 0.00294 -0.0866 0.0291 0.0 0.0 0.0471
ENSG00000142920 AZIN2 -645633 eQTL 0.0206 0.108 0.0465 0.0 0.0 0.0471
ENSG00000162521 RBBP4 -215671 eQTL 0.0159 0.0721 0.0299 0.0 0.0 0.0471
ENSG00000183615 FAM167B 188249 eQTL 1.47e-06 0.379 0.0781 0.0 0.0 0.0471
ENSG00000220785 MTMR9LP 193851 eQTL 4.14e-12 0.605 0.0861 0.0 0.0 0.0471

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000134684 \N -382682 1.26e-06 8.81e-07 3.08e-07 3.63e-07 2.19e-07 3.69e-07 8.7e-07 3.02e-07 1.09e-06 3.28e-07 1.25e-06 5.81e-07 1.46e-06 2.29e-07 4.49e-07 6.36e-07 7.43e-07 5.72e-07 4.06e-07 4.48e-07 3.49e-07 8.19e-07 6.26e-07 4.66e-07 1.79e-06 3.02e-07 6.38e-07 5.44e-07 8.56e-07 9.25e-07 4.65e-07 3.8e-08 1.78e-07 3.28e-07 3.52e-07 3.32e-07 3.4e-07 1.59e-07 1.49e-07 7.62e-08 2.99e-07 1.19e-06 5.54e-08 3.36e-08 1.73e-07 7.16e-08 1.97e-07 8.34e-08 6.51e-08
ENSG00000142920 AZIN2 -645633 4.68e-07 1.92e-07 7.45e-08 2.53e-07 1.07e-07 1.13e-07 2.95e-07 7.12e-08 2.04e-07 1.21e-07 2.47e-07 1.57e-07 3.4e-07 8.54e-08 7.98e-08 1.17e-07 6.81e-08 2.75e-07 8e-08 8.69e-08 1.33e-07 2.09e-07 2e-07 4.34e-08 3.27e-07 1.86e-07 1.39e-07 1.54e-07 1.58e-07 1.59e-07 1.52e-07 4.71e-08 4.98e-08 9.98e-08 1.07e-07 4.68e-08 5.45e-08 6.78e-08 5.8e-08 8.03e-08 2.84e-08 2.19e-07 3.53e-08 1.55e-08 5.84e-08 1.01e-08 8.21e-08 0.0 4.55e-08
ENSG00000162521 RBBP4 -215671 2.7e-06 2.61e-06 3.28e-07 1.7e-06 5.29e-07 8.21e-07 1.61e-06 6.39e-07 1.85e-06 8.89e-07 2.39e-06 1.29e-06 3.53e-06 1.16e-06 8.54e-07 1.64e-06 1.1e-06 2.24e-06 1.04e-06 1.27e-06 1.14e-06 2.8e-06 2.14e-06 1.03e-06 3.4e-06 1.26e-06 1.31e-06 1.74e-06 2.06e-06 1.76e-06 1.49e-06 3.21e-07 5.65e-07 1.28e-06 1.02e-06 9.27e-07 7.94e-07 3.7e-07 1.07e-06 3.97e-07 2.23e-07 3.06e-06 4.24e-07 1.96e-07 2.74e-07 3.35e-07 6.93e-07 2.4e-07 1.89e-07
ENSG00000183615 FAM167B 188249 3.54e-06 3.08e-06 6.05e-07 1.91e-06 8.52e-07 8.39e-07 2.26e-06 8.94e-07 2.33e-06 1.37e-06 2.98e-06 1.63e-06 4.18e-06 1.43e-06 8.74e-07 1.99e-06 1.54e-06 2.12e-06 1.48e-06 1.21e-06 1.73e-06 3.29e-06 2.88e-06 1.6e-06 4.19e-06 1.21e-06 1.6e-06 1.71e-06 3.41e-06 2.46e-06 2e-06 4.69e-07 6.49e-07 1.35e-06 1.69e-06 8.95e-07 9.41e-07 4.3e-07 1.23e-06 3.47e-07 4.41e-07 4.11e-06 6.49e-07 1.78e-07 3.81e-07 3.96e-07 8.56e-07 2.62e-07 1.92e-07
ENSG00000220785 MTMR9LP 193851 3.61e-06 2.62e-06 5.59e-07 2e-06 7.91e-07 7.88e-07 2.25e-06 8.45e-07 2.27e-06 1.23e-06 2.72e-06 1.39e-06 3.92e-06 1.42e-06 8.99e-07 2.11e-06 1.58e-06 2.16e-06 1.61e-06 1.28e-06 1.54e-06 3.2e-06 2.67e-06 1.46e-06 4.08e-06 1.28e-06 1.48e-06 1.7e-06 3.06e-06 2.23e-06 2.01e-06 4.33e-07 6.07e-07 1.31e-06 1.61e-06 9.75e-07 9.08e-07 4.09e-07 1.35e-06 3.46e-07 3.75e-07 3.42e-06 5.89e-07 1.81e-07 3.64e-07 3.42e-07 8.96e-07 2.02e-07 1.74e-07