logo

Genes within 1Mb (chr1:32380241:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000004455 AK2 -700755 sc-eQTL 6.29e-01 0.115 0.237 0.051 B_Activated L2
ENSG00000025800 KPNA6 272185 sc-eQTL 4.80e-01 0.17 0.24 0.051 B_Activated L2
ENSG00000084623 EIF3I 158313 sc-eQTL 8.78e-01 -0.0347 0.226 0.051 B_Activated L2
ENSG00000084652 TXLNA 200566 sc-eQTL 4.63e-01 -0.166 0.226 0.051 B_Activated L2
ENSG00000116478 HDAC1 88158 sc-eQTL 4.23e-01 -0.172 0.215 0.051 B_Activated L2
ENSG00000116497 S100PBP -436526 sc-eQTL 5.18e-01 0.145 0.224 0.051 B_Activated L2
ENSG00000116514 RNF19B -584444 sc-eQTL 6.13e-01 -0.114 0.225 0.051 B_Activated L2
ENSG00000116525 TRIM62 -801818 sc-eQTL 8.73e-01 -0.0349 0.218 0.051 B_Activated L2
ENSG00000121774 KHDRBS1 366373 sc-eQTL 1.76e-01 0.29 0.213 0.051 B_Activated L2
ENSG00000121775 TMEM39B 308210 sc-eQTL 6.22e-01 0.111 0.225 0.051 B_Activated L2
ENSG00000134684 YARS -437912 sc-eQTL 9.03e-02 0.396 0.232 0.051 B_Activated L2
ENSG00000160050 CCDC28B 179855 sc-eQTL 9.95e-01 -0.00118 0.202 0.051 B_Activated L2
ENSG00000160055 TMEM234 157882 sc-eQTL 9.15e-01 0.0236 0.222 0.051 B_Activated L2
ENSG00000160058 BSDC1 -14490 sc-eQTL 7.59e-01 0.0741 0.241 0.051 B_Activated L2
ENSG00000160094 ZNF362 -876251 sc-eQTL 5.85e-02 -0.433 0.227 0.051 B_Activated L2
ENSG00000162517 PEF1 735345 sc-eQTL 8.77e-01 0.0354 0.229 0.051 B_Activated L2
ENSG00000162520 SYNC -323355 sc-eQTL 9.87e-01 0.00389 0.236 0.051 B_Activated L2
ENSG00000162521 RBBP4 -270901 sc-eQTL 2.29e-01 -0.275 0.228 0.051 B_Activated L2
ENSG00000175130 MARCKSL1 44008 sc-eQTL 6.67e-01 -0.0903 0.21 0.051 B_Activated L2
ENSG00000176261 ZBTB8OS -270662 sc-eQTL 9.61e-02 -0.36 0.215 0.051 B_Activated L2
ENSG00000182866 LCK 129002 sc-eQTL 6.28e-01 0.0763 0.157 0.051 B_Activated L2
ENSG00000184007 PTP4A2 435385 sc-eQTL 8.25e-01 0.0369 0.166 0.051 B_Activated L2
ENSG00000004455 AK2 -700755 sc-eQTL 7.13e-02 -0.38 0.209 0.053 CD8_TEM L2
ENSG00000025800 KPNA6 272185 sc-eQTL 6.86e-01 -0.0889 0.219 0.053 CD8_TEM L2
ENSG00000084623 EIF3I 158313 sc-eQTL 8.30e-01 -0.0415 0.193 0.053 CD8_TEM L2
ENSG00000084652 TXLNA 200566 sc-eQTL 1.09e-01 -0.311 0.193 0.053 CD8_TEM L2
ENSG00000116478 HDAC1 88158 sc-eQTL 6.89e-01 -0.0761 0.19 0.053 CD8_TEM L2
ENSG00000116497 S100PBP -436526 sc-eQTL 3.36e-01 0.194 0.201 0.053 CD8_TEM L2
ENSG00000116514 RNF19B -584444 sc-eQTL 1.43e-02 -0.513 0.207 0.053 CD8_TEM L2
ENSG00000116525 TRIM62 -801818 sc-eQTL 8.05e-01 0.054 0.218 0.053 CD8_TEM L2
ENSG00000121774 KHDRBS1 366373 sc-eQTL 9.25e-01 0.0175 0.186 0.053 CD8_TEM L2
ENSG00000121775 TMEM39B 308210 sc-eQTL 5.26e-02 0.394 0.202 0.053 CD8_TEM L2
ENSG00000134684 YARS -437912 sc-eQTL 7.75e-01 -0.0526 0.184 0.053 CD8_TEM L2
ENSG00000142920 AZIN2 -700863 sc-eQTL 1.35e-01 0.275 0.183 0.053 CD8_TEM L2
ENSG00000160050 CCDC28B 179855 sc-eQTL 6.22e-01 -0.0913 0.185 0.053 CD8_TEM L2
ENSG00000160055 TMEM234 157882 sc-eQTL 6.27e-01 0.101 0.208 0.053 CD8_TEM L2
ENSG00000160058 BSDC1 -14490 sc-eQTL 4.05e-01 -0.18 0.215 0.053 CD8_TEM L2
ENSG00000160094 ZNF362 -876251 sc-eQTL 8.06e-01 0.0511 0.207 0.053 CD8_TEM L2
ENSG00000162517 PEF1 735345 sc-eQTL 8.51e-01 0.0346 0.184 0.053 CD8_TEM L2
ENSG00000162520 SYNC -323355 sc-eQTL 2.47e-01 0.238 0.205 0.053 CD8_TEM L2
ENSG00000162521 RBBP4 -270901 sc-eQTL 3.27e-01 0.18 0.184 0.053 CD8_TEM L2
ENSG00000175130 MARCKSL1 44008 sc-eQTL 9.96e-01 -0.000851 0.165 0.053 CD8_TEM L2
ENSG00000176261 ZBTB8OS -270662 sc-eQTL 7.00e-01 -0.0728 0.189 0.053 CD8_TEM L2
ENSG00000182866 LCK 129002 sc-eQTL 3.60e-02 0.214 0.101 0.053 CD8_TEM L2
ENSG00000184007 PTP4A2 435385 sc-eQTL 8.75e-01 -0.0254 0.162 0.053 CD8_TEM L2
ENSG00000004455 AK2 -700755 sc-eQTL 2.33e-01 -0.262 0.219 0.05 NK_HLA L2
ENSG00000025800 KPNA6 272185 sc-eQTL 7.63e-01 -0.0686 0.227 0.05 NK_HLA L2
ENSG00000084623 EIF3I 158313 sc-eQTL 2.69e-01 0.254 0.229 0.05 NK_HLA L2
ENSG00000084652 TXLNA 200566 sc-eQTL 1.53e-01 -0.304 0.212 0.05 NK_HLA L2
ENSG00000116478 HDAC1 88158 sc-eQTL 9.92e-01 0.00196 0.205 0.05 NK_HLA L2
ENSG00000116497 S100PBP -436526 sc-eQTL 1.83e-01 -0.28 0.21 0.05 NK_HLA L2
ENSG00000116514 RNF19B -584444 sc-eQTL 4.72e-01 -0.151 0.21 0.05 NK_HLA L2
ENSG00000116525 TRIM62 -801818 sc-eQTL 2.84e-01 0.238 0.222 0.05 NK_HLA L2
ENSG00000121753 ADGRB2 615348 sc-eQTL 9.26e-01 0.0173 0.186 0.05 NK_HLA L2
ENSG00000121774 KHDRBS1 366373 sc-eQTL 6.45e-01 0.0885 0.192 0.05 NK_HLA L2
ENSG00000121775 TMEM39B 308210 sc-eQTL 4.20e-01 -0.186 0.23 0.05 NK_HLA L2
ENSG00000134684 YARS -437912 sc-eQTL 3.79e-01 -0.206 0.234 0.05 NK_HLA L2
ENSG00000160050 CCDC28B 179855 sc-eQTL 8.29e-01 0.0425 0.196 0.05 NK_HLA L2
ENSG00000160055 TMEM234 157882 sc-eQTL 5.01e-01 0.15 0.223 0.05 NK_HLA L2
ENSG00000160058 BSDC1 -14490 sc-eQTL 4.11e-02 -0.464 0.226 0.05 NK_HLA L2
ENSG00000160094 ZNF362 -876251 sc-eQTL 4.26e-01 -0.177 0.221 0.05 NK_HLA L2
ENSG00000162517 PEF1 735345 sc-eQTL 9.99e-01 -0.000245 0.219 0.05 NK_HLA L2
ENSG00000162520 SYNC -323355 sc-eQTL 7.41e-01 0.0743 0.225 0.05 NK_HLA L2
ENSG00000162521 RBBP4 -270901 sc-eQTL 1.07e-01 -0.355 0.219 0.05 NK_HLA L2
ENSG00000175130 MARCKSL1 44008 sc-eQTL 3.41e-01 -0.162 0.169 0.05 NK_HLA L2
ENSG00000176261 ZBTB8OS -270662 sc-eQTL 6.33e-01 0.11 0.23 0.05 NK_HLA L2
ENSG00000182866 LCK 129002 sc-eQTL 5.17e-01 0.101 0.156 0.05 NK_HLA L2
ENSG00000184007 PTP4A2 435385 sc-eQTL 9.26e-01 0.0163 0.175 0.05 NK_HLA L2
ENSG00000004455 AK2 -700755 sc-eQTL 9.39e-01 0.0167 0.216 0.063 PB L2
ENSG00000025800 KPNA6 272185 sc-eQTL 1.44e-01 0.353 0.24 0.063 PB L2
ENSG00000084623 EIF3I 158313 sc-eQTL 6.14e-01 0.0722 0.143 0.063 PB L2
ENSG00000084652 TXLNA 200566 sc-eQTL 1.85e-01 0.251 0.188 0.063 PB L2
ENSG00000116478 HDAC1 88158 sc-eQTL 1.68e-01 -0.302 0.218 0.063 PB L2
ENSG00000116497 S100PBP -436526 sc-eQTL 6.85e-01 -0.0953 0.234 0.063 PB L2
ENSG00000116514 RNF19B -584444 sc-eQTL 5.59e-01 -0.143 0.245 0.063 PB L2
ENSG00000116525 TRIM62 -801818 sc-eQTL 9.82e-01 0.00554 0.24 0.063 PB L2
ENSG00000121774 KHDRBS1 366373 sc-eQTL 5.04e-01 -0.132 0.197 0.063 PB L2
ENSG00000121775 TMEM39B 308210 sc-eQTL 6.99e-01 -0.088 0.227 0.063 PB L2
ENSG00000134684 YARS -437912 sc-eQTL 6.74e-01 -0.0728 0.173 0.063 PB L2
ENSG00000160050 CCDC28B 179855 sc-eQTL 4.39e-01 0.168 0.216 0.063 PB L2
ENSG00000160055 TMEM234 157882 sc-eQTL 1.42e-01 -0.365 0.247 0.063 PB L2
ENSG00000160058 BSDC1 -14490 sc-eQTL 5.14e-01 -0.178 0.272 0.063 PB L2
ENSG00000160094 ZNF362 -876251 sc-eQTL 8.69e-01 0.0411 0.25 0.063 PB L2
ENSG00000162517 PEF1 735345 sc-eQTL 6.45e-01 -0.105 0.228 0.063 PB L2
ENSG00000162520 SYNC -323355 sc-eQTL 2.11e-01 -0.246 0.196 0.063 PB L2
ENSG00000162521 RBBP4 -270901 sc-eQTL 3.95e-01 -0.148 0.173 0.063 PB L2
ENSG00000175130 MARCKSL1 44008 sc-eQTL 6.68e-01 0.0771 0.179 0.063 PB L2
ENSG00000176261 ZBTB8OS -270662 sc-eQTL 3.58e-02 -0.301 0.142 0.063 PB L2
ENSG00000182866 LCK 129002 sc-eQTL 3.24e-01 -0.222 0.225 0.063 PB L2
ENSG00000184007 PTP4A2 435385 sc-eQTL 6.77e-01 0.0645 0.155 0.063 PB L2
ENSG00000004455 AK2 -700755 sc-eQTL 9.73e-01 -0.00504 0.148 0.05 Pro_T L2
ENSG00000025800 KPNA6 272185 sc-eQTL 5.21e-01 -0.142 0.221 0.05 Pro_T L2
ENSG00000084623 EIF3I 158313 sc-eQTL 5.23e-01 -0.0908 0.142 0.05 Pro_T L2
ENSG00000084652 TXLNA 200566 sc-eQTL 3.34e-01 0.185 0.191 0.05 Pro_T L2
ENSG00000116478 HDAC1 88158 sc-eQTL 1.10e-01 0.267 0.166 0.05 Pro_T L2
ENSG00000116497 S100PBP -436526 sc-eQTL 8.26e-01 0.0442 0.202 0.05 Pro_T L2
ENSG00000116514 RNF19B -584444 sc-eQTL 9.13e-01 0.0219 0.199 0.05 Pro_T L2
ENSG00000116525 TRIM62 -801818 sc-eQTL 1.11e-01 -0.313 0.196 0.05 Pro_T L2
ENSG00000121774 KHDRBS1 366373 sc-eQTL 2.99e-02 0.351 0.161 0.05 Pro_T L2
ENSG00000121775 TMEM39B 308210 sc-eQTL 6.90e-01 -0.0781 0.195 0.05 Pro_T L2
ENSG00000134684 YARS -437912 sc-eQTL 1.47e-01 0.231 0.159 0.05 Pro_T L2
ENSG00000142920 AZIN2 -700863 sc-eQTL 4.13e-01 -0.136 0.166 0.05 Pro_T L2
ENSG00000160050 CCDC28B 179855 sc-eQTL 2.61e-01 -0.164 0.146 0.05 Pro_T L2
ENSG00000160055 TMEM234 157882 sc-eQTL 3.35e-02 -0.436 0.204 0.05 Pro_T L2
ENSG00000160058 BSDC1 -14490 sc-eQTL 3.94e-01 -0.193 0.226 0.05 Pro_T L2
ENSG00000160094 ZNF362 -876251 sc-eQTL 9.92e-01 0.00199 0.197 0.05 Pro_T L2
ENSG00000162517 PEF1 735345 sc-eQTL 6.63e-02 0.373 0.202 0.05 Pro_T L2
ENSG00000162520 SYNC -323355 sc-eQTL 5.17e-01 -0.111 0.171 0.05 Pro_T L2
ENSG00000162521 RBBP4 -270901 sc-eQTL 7.66e-01 -0.0433 0.145 0.05 Pro_T L2
ENSG00000175130 MARCKSL1 44008 sc-eQTL 2.76e-01 0.183 0.168 0.05 Pro_T L2
ENSG00000176261 ZBTB8OS -270662 sc-eQTL 1.76e-01 0.207 0.152 0.05 Pro_T L2
ENSG00000182866 LCK 129002 sc-eQTL 6.30e-01 -0.0498 0.103 0.05 Pro_T L2
ENSG00000184007 PTP4A2 435385 sc-eQTL 6.31e-01 -0.077 0.16 0.05 Pro_T L2
ENSG00000004455 AK2 -700755 sc-eQTL 8.56e-01 -0.0379 0.208 0.051 intMono L2
ENSG00000025800 KPNA6 272185 sc-eQTL 6.73e-01 -0.0913 0.216 0.051 intMono L2
ENSG00000084623 EIF3I 158313 sc-eQTL 5.55e-02 0.38 0.197 0.051 intMono L2
ENSG00000084652 TXLNA 200566 sc-eQTL 9.87e-01 0.00368 0.225 0.051 intMono L2
ENSG00000116478 HDAC1 88158 sc-eQTL 2.58e-01 0.241 0.213 0.051 intMono L2
ENSG00000116497 S100PBP -436526 sc-eQTL 8.60e-02 0.335 0.194 0.051 intMono L2
ENSG00000116514 RNF19B -584444 sc-eQTL 1.84e-01 0.235 0.177 0.051 intMono L2
ENSG00000116525 TRIM62 -801818 sc-eQTL 4.89e-01 -0.149 0.214 0.051 intMono L2
ENSG00000121774 KHDRBS1 366373 sc-eQTL 9.39e-01 0.0139 0.181 0.051 intMono L2
ENSG00000121775 TMEM39B 308210 sc-eQTL 2.61e-03 0.665 0.218 0.051 intMono L2
ENSG00000134684 YARS -437912 sc-eQTL 8.79e-01 -0.0327 0.215 0.051 intMono L2
ENSG00000160050 CCDC28B 179855 sc-eQTL 3.27e-01 0.214 0.218 0.051 intMono L2
ENSG00000160055 TMEM234 157882 sc-eQTL 3.14e-01 -0.222 0.22 0.051 intMono L2
ENSG00000160058 BSDC1 -14490 sc-eQTL 5.21e-01 0.148 0.23 0.051 intMono L2
ENSG00000160094 ZNF362 -876251 sc-eQTL 4.73e-01 0.158 0.22 0.051 intMono L2
ENSG00000162517 PEF1 735345 sc-eQTL 2.52e-01 -0.244 0.213 0.051 intMono L2
ENSG00000162520 SYNC -323355 sc-eQTL 8.43e-01 0.0422 0.212 0.051 intMono L2
ENSG00000162521 RBBP4 -270901 sc-eQTL 6.47e-01 0.0952 0.208 0.051 intMono L2
ENSG00000162522 KIAA1522 -361589 sc-eQTL 9.37e-01 0.0169 0.214 0.051 intMono L2
ENSG00000168528 SERINC2 970676 sc-eQTL 6.95e-01 -0.0835 0.212 0.051 intMono L2
ENSG00000175130 MARCKSL1 44008 sc-eQTL 5.69e-01 -0.0861 0.151 0.051 intMono L2
ENSG00000176261 ZBTB8OS -270662 sc-eQTL 4.38e-01 -0.131 0.168 0.051 intMono L2
ENSG00000184007 PTP4A2 435385 sc-eQTL 5.92e-01 0.0737 0.137 0.051 intMono L2
ENSG00000225828 FAM229A 15963 sc-eQTL 9.52e-01 0.0126 0.208 0.051 intMono L2
ENSG00000284543 LINC01226 874015 sc-eQTL 5.09e-02 0.392 0.199 0.051 intMono L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116514 RNF19B -584444 eQTL 0.0325 0.0877 0.0409 0.0 0.0 0.0471
ENSG00000160055 TMEM234 157882 eQTL 0.034 0.06 0.0283 0.00125 0.0 0.0471
ENSG00000160097 FNDC5 -492241 eQTL 0.00683 -0.259 0.0955 0.00456 0.00138 0.0471
ENSG00000183615 FAM167B 133019 eQTL 0.0179 -0.205 0.0863 0.0 0.0 0.0471
ENSG00000220785 MTMR9LP 138621 eQTL 0.00606 -0.265 0.0964 0.0 0.0 0.0471
ENSG00000269967 AL136115.2 458400 eQTL 0.0437 0.129 0.064 0.00138 0.0 0.0471

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116514 RNF19B -584444 2.61e-07 1.08e-07 3.56e-08 1.82e-07 9.91e-08 9.87e-08 1.42e-07 5.21e-08 1.36e-07 4.23e-08 1.61e-07 7.58e-08 1.27e-07 6.07e-08 4.89e-08 7.87e-08 4.94e-08 1.07e-07 5.22e-08 3.74e-08 1.06e-07 1.33e-07 1.3e-07 5.01e-08 1.29e-07 1.13e-07 1.1e-07 8.7e-08 9.97e-08 1.11e-07 9.75e-08 3.89e-08 2.74e-08 8.3e-08 8.87e-08 3.9e-08 4.85e-08 9.44e-08 7.47e-08 3.07e-08 4.83e-08 1.39e-07 4.01e-08 0.0 1.01e-07 1.69e-08 1.37e-07 4.6e-09 4.74e-08
ENSG00000217644 \N -599706 2.61e-07 1.08e-07 3.59e-08 1.78e-07 9.91e-08 9.87e-08 1.42e-07 5.21e-08 1.36e-07 4.23e-08 1.61e-07 7.6e-08 1.27e-07 6.07e-08 4.89e-08 7.87e-08 4.94e-08 1.07e-07 5.22e-08 3.74e-08 1.06e-07 1.33e-07 1.3e-07 5.01e-08 1.29e-07 1.13e-07 1.1e-07 8.71e-08 9.97e-08 1.11e-07 9.75e-08 3.95e-08 2.74e-08 8.3e-08 8.93e-08 3.93e-08 4.91e-08 9.13e-08 7.58e-08 3.07e-08 4.68e-08 1.39e-07 3.82e-08 0.0 1.01e-07 1.7e-08 1.37e-07 4.6e-09 4.74e-08