Genes within 1Mb (chr1:32213205:C:CTTTTA):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000025800 KPNA6 105149 eQTL 2.77e-05 0.0555 0.0132 0.00706 0.00686 0.189
ENSG00000060688 SNRNP40 916417 eQTL 2.48e-02 0.0466 0.0207 0.00103 0.0 0.189
ENSG00000084623 EIF3I -8723 eQTL 1.69e-05 -0.0776 0.018 0.00936 0.00858 0.189
ENSG00000116514 RNF19B -751480 eQTL 2.46e-03 0.0628 0.0207 0.0 0.0 0.189
ENSG00000121775 TMEM39B 141174 eQTL 1.42e-15 -0.196 0.0241 0.00652 0.00653 0.189
ENSG00000121900 TMEM54 -688233 eQTL 3.96e-02 0.0707 0.0343 0.0 0.0 0.189
ENSG00000134668 SPOCD1 397154 eQTL 1.41e-02 -0.0749 0.0305 0.0 0.0 0.189
ENSG00000134684 YARS -604948 eQTL 2.22e-02 -0.0433 0.0189 0.0 0.0 0.189
ENSG00000160050 CCDC28B 12819 eQTL 1.51e-04 0.0993 0.0261 0.0055 0.00519 0.189
ENSG00000160055 TMEM234 -9154 eQTL 2.35e-01 0.017 0.0143 0.00157 0.0 0.189
ENSG00000162520 SYNC -490391 eQTL 7.91e-08 -0.205 0.0378 0.00152 0.0 0.189
ENSG00000162522 KIAA1522 -528625 eQTL 1.28e-15 -0.287 0.0352 0.0 0.0 0.189
ENSG00000162526 TSSK3 -138316 eQTL 1.95e-02 0.0969 0.0414 0.0 0.0 0.189
ENSG00000176261 ZBTB8OS -437698 eQTL 1.81e-05 -0.0668 0.0155 0.0 0.0 0.189
ENSG00000183615 FAM167B -34017 eQTL 1.75e-53 0.635 0.0387 0.00644 0.0103 0.189
ENSG00000220785 MTMR9LP -28415 eQTL 1.19e-201 1.19 0.0302 0.00228 0.019 0.189
ENSG00000222046 DCDC2B 4111 eQTL 4.04e-05 0.129 0.0314 0.00778 0.00686 0.189
ENSG00000224066 AL049795.1 6391 eQTL 6.78e-03 0.119 0.044 0.00215 0.00115 0.189
ENSG00000278966 AL031602.1 -760348 eQTL 1.59e-02 -0.104 0.0431 0.0 0.0 0.189


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000025800 KPNA6 105149 1.96e-06 1.58e-06 3.26e-07 1.13e-06 2.14e-07 7.71e-07 1.44e-06 9.91e-08 1.5e-06 3.05e-07 1.35e-06 6.02e-07 2.7e-06 2.7e-07 3.08e-07 4.79e-07 7.57e-07 5.82e-07 3.51e-07 7.54e-08 2.62e-07 9.58e-07 8.35e-07 1.06e-07 1.94e-06 6.01e-07 4.91e-07 2.83e-07 1.46e-06 1.25e-06 4.55e-07 3.94e-08 4.93e-08 6.19e-07 9.03e-07 3.21e-07 1.11e-07 1.58e-07 4.44e-08 8.22e-09 5.37e-08 1.58e-06 4.81e-07 1.69e-07 1.14e-07 1.85e-07 7.36e-08 2.85e-09 5.04e-08
ENSG00000084623 EIF3I -8723 0.000145 8.73e-05 8.22e-06 1.32e-05 3.92e-06 1.8e-05 4.55e-05 2.44e-06 2.34e-05 7.31e-06 2.86e-05 9.35e-06 5.6e-05 1.2e-05 7.12e-06 1.3e-05 1.44e-05 1.71e-05 6e-06 4.29e-06 8.37e-06 3.37e-05 3.77e-05 6.42e-06 3.83e-05 5.31e-06 1.06e-05 7.09e-06 4.44e-05 1.42e-05 1.18e-05 9.81e-07 1.52e-06 5.45e-06 8.64e-06 2.9e-06 1.71e-06 2.13e-06 2.14e-06 2.03e-06 9.45e-07 8.86e-05 9.66e-06 4.21e-07 2.74e-06 4.25e-06 3.42e-06 7.67e-07 1.56e-06
ENSG00000084652 \N 33530 1.02e-05 1.48e-05 2.05e-06 4.49e-06 2.08e-06 3.93e-06 1.41e-05 7.35e-07 5.5e-06 2.02e-06 7.6e-06 3.37e-06 1.17e-05 2.99e-06 1.1e-06 3.3e-06 3.68e-06 3.83e-06 1.44e-06 1.07e-06 2.77e-06 5.53e-06 7.49e-06 1.78e-06 9.05e-06 2.08e-06 2.49e-06 1.78e-06 8.97e-06 5.44e-06 2.72e-06 3.87e-08 4.72e-07 2.99e-06 4.61e-06 1.17e-06 9.08e-07 4.24e-07 1.34e-06 3.61e-07 2.81e-07 1.39e-05 2.55e-06 5.28e-07 7.77e-07 1.8e-06 8.55e-07 2.38e-07 2.86e-07
ENSG00000121775 TMEM39B 141174 1.29e-06 8.47e-07 9.71e-08 4.1e-07 1.13e-07 4.76e-07 1.38e-06 5.68e-08 6.52e-07 1.7e-07 5.73e-07 3.91e-07 1.43e-06 1.34e-07 6.6e-08 1.49e-07 1.17e-07 4.2e-07 1.13e-07 4.8e-08 1.6e-07 3.13e-07 3.87e-07 3.49e-08 6.65e-07 2.57e-07 1.83e-07 1.42e-07 5.16e-07 6.42e-07 1.88e-07 3.89e-08 3.43e-08 2.33e-07 4.31e-07 6.23e-08 5.54e-08 7.75e-08 6.3e-08 8.06e-08 4.44e-08 7.54e-07 4.07e-07 1.74e-07 2.64e-08 1.55e-08 8.74e-08 1.89e-09 5.04e-08
ENSG00000134684 YARS -604948 2.6e-07 1.11e-07 3.41e-08 1.67e-07 1.03e-07 9.13e-08 1.39e-07 5.29e-08 1.32e-07 3.99e-08 1.59e-07 7.49e-08 1.21e-07 6.1e-08 4.48e-08 7.4e-08 5.2e-08 1.02e-07 4.91e-08 2.93e-08 1.04e-07 1.31e-07 1.31e-07 5.23e-08 1.33e-07 1.03e-07 1.11e-07 8.27e-08 1.05e-07 1.1e-07 9.43e-08 3.29e-08 2.6e-08 8e-08 9.51e-08 4.23e-08 4.01e-08 8.48e-08 8.39e-08 3.96e-08 2.6e-08 1.4e-07 4.34e-08 4.26e-08 1.15e-07 1.86e-08 1.5e-07 4.96e-09 4.72e-08
ENSG00000142920 \N -867899 2.6e-07 1.16e-07 3.49e-08 1.65e-07 1.03e-07 9.05e-08 1.36e-07 5.29e-08 1.33e-07 3.99e-08 1.59e-07 7.4e-08 1.2e-07 6.1e-08 4.48e-08 7.4e-08 5.2e-08 1.02e-07 4.91e-08 2.93e-08 1.04e-07 1.31e-07 1.31e-07 5.23e-08 1.32e-07 1.03e-07 1.12e-07 8.27e-08 1.04e-07 1.09e-07 9.43e-08 3.29e-08 2.6e-08 8.09e-08 1.01e-07 4.32e-08 3.84e-08 8e-08 8.39e-08 3.96e-08 2.71e-08 1.42e-07 4.33e-08 0.0 1.15e-07 1.86e-08 1.47e-07 4.96e-09 4.72e-08
ENSG00000160050 CCDC28B 12819 5.86e-05 4.26e-05 5.25e-06 9.74e-06 2.6e-06 8.94e-06 2.75e-05 1.55e-06 1.26e-05 4.62e-06 1.5e-05 5.9e-06 2.87e-05 4.76e-06 4.55e-06 6.97e-06 8.2e-06 8.54e-06 3.42e-06 2.74e-06 6.27e-06 1.27e-05 1.85e-05 3.27e-06 2.35e-05 4.32e-06 6.4e-06 4.05e-06 2.3e-05 9.25e-06 5.43e-06 4.91e-07 9.16e-07 4.03e-06 7.51e-06 2.66e-06 9.48e-07 1.84e-06 1.32e-06 9.53e-07 6.17e-07 3.56e-05 4.94e-06 5.28e-07 2.01e-06 3.29e-06 1.6e-06 7.8e-07 4.27e-07
ENSG00000162520 SYNC -490391 2.66e-07 1.11e-07 3.41e-08 1.7e-07 1.02e-07 9.32e-08 1.41e-07 5.29e-08 1.36e-07 4.23e-08 1.61e-07 7.6e-08 1.23e-07 6.1e-08 4.77e-08 7.76e-08 5.15e-08 1.06e-07 5.12e-08 2.88e-08 1.03e-07 1.31e-07 1.31e-07 5.19e-08 1.33e-07 1.03e-07 1.11e-07 8.27e-08 1.03e-07 1.1e-07 9.5e-08 3.29e-08 2.6e-08 8.26e-08 9.14e-08 4.14e-08 4.7e-08 8.48e-08 8.39e-08 3.87e-08 2.6e-08 1.4e-07 4.23e-08 2.79e-08 1.15e-07 1.83e-08 1.5e-07 4.96e-09 4.72e-08
ENSG00000162522 KIAA1522 -528625 2.66e-07 1.11e-07 3.41e-08 1.68e-07 1.03e-07 9.32e-08 1.42e-07 5.29e-08 1.32e-07 3.99e-08 1.61e-07 7.49e-08 1.21e-07 6.1e-08 4.48e-08 7.76e-08 5.15e-08 1.06e-07 4.91e-08 2.93e-08 1.03e-07 1.31e-07 1.31e-07 5.23e-08 1.33e-07 1.03e-07 1.11e-07 8.27e-08 1.05e-07 1.09e-07 9.43e-08 3.29e-08 2.6e-08 8e-08 9.41e-08 4.23e-08 4.7e-08 8.48e-08 8.39e-08 3.87e-08 2.6e-08 1.4e-07 4.36e-08 2.09e-08 1.15e-07 1.83e-08 1.5e-07 4.96e-09 4.72e-08
ENSG00000168528 \N 803640 2.6e-07 1.16e-07 3.49e-08 1.65e-07 1.03e-07 9.05e-08 1.36e-07 5.29e-08 1.32e-07 3.99e-08 1.59e-07 7.4e-08 1.2e-07 6.1e-08 4.48e-08 7.4e-08 5.2e-08 1.02e-07 4.91e-08 2.93e-08 1.04e-07 1.31e-07 1.31e-07 5.23e-08 1.32e-07 1.03e-07 1.12e-07 8.27e-08 1.04e-07 1.09e-07 9.43e-08 3.29e-08 2.6e-08 8.09e-08 1.01e-07 4.32e-08 4.01e-08 8e-08 8.39e-08 3.96e-08 2.71e-08 1.42e-07 4.33e-08 0.0 1.15e-07 1.86e-08 1.47e-07 4.96e-09 4.72e-08
ENSG00000183615 FAM167B -34017 1.01e-05 1.48e-05 1.98e-06 4.35e-06 2.11e-06 3.93e-06 1.38e-05 6.98e-07 5.33e-06 1.94e-06 7.56e-06 3.32e-06 1.15e-05 2.81e-06 1.16e-06 3.4e-06 3.72e-06 3.79e-06 1.45e-06 1.18e-06 2.73e-06 5.41e-06 7.38e-06 1.84e-06 9.13e-06 2.09e-06 2.51e-06 1.73e-06 8.7e-06 5.42e-06 2.72e-06 3.8e-08 4.16e-07 3.01e-06 4.62e-06 1.18e-06 9.25e-07 4.42e-07 1.3e-06 4.16e-07 2.79e-07 1.37e-05 2.54e-06 5.2e-07 7.95e-07 1.72e-06 9e-07 2.23e-07 2.71e-07
ENSG00000220785 MTMR9LP -28415 1.13e-05 1.71e-05 2.57e-06 5.03e-06 2.4e-06 4.22e-06 1.69e-05 8.79e-07 6.19e-06 2.44e-06 8.87e-06 2.82e-06 1.32e-05 3.66e-06 1.01e-06 3.73e-06 3.77e-06 4.03e-06 1.65e-06 9.69e-07 2.8e-06 6.43e-06 8.99e-06 1.38e-06 9.79e-06 2.4e-06 2.34e-06 1.49e-06 1.09e-05 6.65e-06 2.91e-06 1.58e-07 5.91e-07 3.31e-06 4.96e-06 1.35e-06 9.88e-07 4.57e-07 1.19e-06 4.57e-07 3.4e-07 1.63e-05 2.67e-06 5.27e-07 7.72e-07 1.74e-06 6.8e-07 3.19e-07 1.98e-07
ENSG00000222046 DCDC2B 4111 0.000181 0.000125 1.22e-05 1.75e-05 6.62e-06 2.66e-05 7.63e-05 4.44e-06 4.81e-05 1.33e-05 6.05e-05 2.45e-05 0.000101 2.04e-05 1.21e-05 3.2e-05 2.88e-05 3.97e-05 1.04e-05 5.81e-06 1.54e-05 7.69e-05 7.76e-05 1.05e-05 6.14e-05 8.74e-06 2.07e-05 1.14e-05 8.22e-05 2.23e-05 2.32e-05 1.16e-06 2.41e-06 6.04e-06 9.6e-06 4.54e-06 1.7e-06 2.79e-06 3.62e-06 3.51e-06 1.58e-06 0.000159 1.2e-05 4.37e-07 3.22e-06 5.22e-06 4.88e-06 1.53e-06 1.82e-06
ENSG00000224066 AL049795.1 6391 0.000174 0.000119 1.09e-05 1.56e-05 4.91e-06 2.27e-05 5.89e-05 3.72e-06 3.66e-05 1.02e-05 4.36e-05 1.72e-05 7.79e-05 1.73e-05 9.71e-06 2.32e-05 2.08e-05 2.61e-05 7.47e-06 5.35e-06 1.15e-05 5.71e-05 5.97e-05 8.8e-06 5.3e-05 6.16e-06 1.75e-05 9.23e-06 6.7e-05 1.74e-05 1.66e-05 1.04e-06 2.31e-06 6.33e-06 9.06e-06 3.76e-06 1.76e-06 2.72e-06 3.09e-06 2.88e-06 1.34e-06 0.000136 1.18e-05 4.21e-07 2.89e-06 4.6e-06 4.09e-06 8.55e-07 1.45e-06
ENSG00000228634 \N 280185 2.8e-07 1.16e-07 3.69e-08 1.82e-07 8.92e-08 8.33e-08 2.1e-07 5.21e-08 1.41e-07 4.38e-08 1.62e-07 8.14e-08 1.47e-07 6.21e-08 4.84e-08 7.89e-08 4.94e-08 1.14e-07 5.19e-08 3.15e-08 1.05e-07 1.28e-07 1.32e-07 4.98e-08 1.32e-07 1.19e-07 1.12e-07 8.45e-08 1.08e-07 1.02e-07 9.58e-08 3.19e-08 2.74e-08 8.25e-08 3.4e-08 3.87e-08 4.85e-08 9.25e-08 8.3e-08 3.34e-08 3.71e-08 1.33e-07 5.22e-08 1.92e-08 1.01e-07 1.7e-08 1.35e-07 4.82e-09 4.72e-08