Genes within 1Mb (chr1:32090740:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000025800 KPNA6 -17316 eQTL 2.48e-05 0.0563 0.0133 0.00779 0.00767 0.19
ENSG00000060688 SNRNP40 793952 eQTL 3.14e-02 0.0451 0.0209 0.0 0.0 0.19
ENSG00000084623 EIF3I -131188 eQTL 3.49e-05 -0.0754 0.0181 0.0049 0.00443 0.19
ENSG00000116497 S100PBP -726027 eQTL 4.30e-02 -0.033 0.0163 0.0 0.0 0.19
ENSG00000116514 RNF19B -873945 eQTL 2.83e-03 0.0624 0.0209 0.0 0.0 0.19
ENSG00000121775 TMEM39B 18709 eQTL 8.79e-16 -0.199 0.0243 0.012 0.012 0.19
ENSG00000121900 TMEM54 -810698 eQTL 4.67e-02 0.069 0.0346 0.0 0.0 0.19
ENSG00000134668 SPOCD1 274689 eQTL 8.46e-03 -0.081 0.0307 0.0 0.0 0.19
ENSG00000134684 YARS -727413 eQTL 2.02e-02 -0.0444 0.0191 0.0 0.0 0.19
ENSG00000160050 CCDC28B -109646 eQTL 1.30e-04 0.101 0.0263 0.00628 0.00597 0.19
ENSG00000160055 TMEM234 -131619 eQTL 1.75e-01 0.0196 0.0145 0.00179 0.0 0.19
ENSG00000162520 SYNC -612856 eQTL 2.96e-08 -0.213 0.0381 0.00181 0.0 0.19
ENSG00000162522 KIAA1522 -651090 eQTL 5.06e-16 -0.293 0.0355 0.0 0.0 0.19
ENSG00000162526 TSSK3 -260781 eQTL 1.86e-02 0.0984 0.0418 0.0 0.0 0.19
ENSG00000176261 ZBTB8OS -560163 eQTL 5.60e-05 -0.0633 0.0157 0.0 0.0 0.19
ENSG00000183615 FAM167B -156482 eQTL 1.20e-52 0.636 0.0391 0.0 0.00425 0.19
ENSG00000220785 MTMR9LP -150880 eQTL 1.67e-194 1.19 0.031 0.0 0.0 0.19
ENSG00000222046 DCDC2B -118354 eQTL 4.97e-05 0.129 0.0317 0.0063 0.00561 0.19
ENSG00000224066 AL049795.1 -116074 eQTL 1.00e-02 0.115 0.0444 0.00184 0.0 0.19
ENSG00000278966 AL031602.1 -882813 eQTL 1.71e-02 -0.104 0.0435 0.0 0.0 0.19


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000025800 KPNA6 -17316 1.83e-05 2.36e-05 3.38e-06 1.2e-05 3.33e-06 8.49e-06 2.73e-05 3.37e-06 1.85e-05 9.01e-06 2.42e-05 9.35e-06 3.48e-05 8.97e-06 5.23e-06 1.06e-05 1.05e-05 1.62e-05 5.1e-06 4.41e-06 8.58e-06 2.02e-05 2e-05 5.59e-06 3.11e-05 5.39e-06 8.03e-06 8.05e-06 2.14e-05 1.83e-05 1.28e-05 1.33e-06 1.66e-06 4.87e-06 8.09e-06 4.2e-06 2.04e-06 2.61e-06 3.46e-06 2.18e-06 1.55e-06 2.65e-05 2.6e-06 2.62e-07 1.91e-06 2.79e-06 2.71e-06 1.24e-06 9.71e-07
ENSG00000084623 EIF3I -131188 2.14e-06 2.64e-06 2.51e-07 1.68e-06 4.37e-07 8.14e-07 1.63e-06 4.41e-07 1.72e-06 7.3e-07 2.11e-06 1.29e-06 3.58e-06 1.43e-06 5.03e-07 1.21e-06 1.07e-06 1.57e-06 5.3e-07 7.6e-07 7.02e-07 2.32e-06 2.11e-06 1e-06 3.4e-06 1.26e-06 1.11e-06 1.32e-06 1.8e-06 1.64e-06 1.31e-06 2.82e-07 4e-07 1.02e-06 9.21e-07 6.6e-07 7.55e-07 3.47e-07 9.39e-07 2.76e-07 3.05e-07 3.36e-06 4.23e-07 1.41e-07 3.62e-07 3.28e-07 2.9e-07 2.51e-07 2.61e-07
ENSG00000121775 TMEM39B 18709 1.67e-05 2.22e-05 3.07e-06 1.13e-05 3.17e-06 7.88e-06 2.56e-05 3.1e-06 1.76e-05 8.7e-06 2.31e-05 8.78e-06 3.3e-05 8.55e-06 5.14e-06 1.03e-05 1e-05 1.53e-05 4.65e-06 4.29e-06 8.31e-06 1.87e-05 1.9e-05 5.19e-06 3e-05 5.6e-06 8.02e-06 7.75e-06 2.01e-05 1.73e-05 1.23e-05 1.26e-06 1.68e-06 4.4e-06 7.67e-06 4.02e-06 1.91e-06 2.43e-06 3.31e-06 2.05e-06 1.44e-06 2.52e-05 2.71e-06 2.71e-07 1.88e-06 2.61e-06 2.5e-06 1.26e-06 8.17e-07
ENSG00000134684 YARS -727413 2.66e-07 1.11e-07 3.31e-08 1.82e-07 9.02e-08 9.57e-08 1.41e-07 5.33e-08 1.41e-07 4.38e-08 1.62e-07 7.88e-08 1.26e-07 6.21e-08 5.4e-08 7.5e-08 4.94e-08 1.1e-07 5.19e-08 4.03e-08 1.04e-07 1.28e-07 1.3e-07 4.13e-08 1.31e-07 1.15e-07 1.1e-07 8.71e-08 9.88e-08 1.09e-07 9.58e-08 4.07e-08 3.28e-08 8.65e-08 8.93e-08 3.97e-08 5.01e-08 9.68e-08 7.47e-08 3.54e-08 3.92e-08 1.37e-07 3.98e-08 1.71e-08 6.92e-08 1.7e-08 1.24e-07 3.95e-09 4.85e-08
ENSG00000142920 \N -990364 2.66e-07 1.06e-07 3.44e-08 1.76e-07 9.91e-08 9.36e-08 1.39e-07 5.21e-08 1.36e-07 4.23e-08 1.63e-07 7.58e-08 1.23e-07 6.07e-08 4.84e-08 7.87e-08 5.1e-08 1.07e-07 5.22e-08 3.59e-08 1.06e-07 1.31e-07 1.29e-07 4.82e-08 1.32e-07 1.13e-07 1.13e-07 8.45e-08 1.03e-07 1.09e-07 9.75e-08 3.95e-08 2.74e-08 8.3e-08 9.27e-08 3.97e-08 4.67e-08 9.25e-08 8.3e-08 3.09e-08 4.45e-08 1.39e-07 3.91e-08 2.32e-08 8.79e-08 1.75e-08 1.34e-07 4.26e-09 4.91e-08
ENSG00000160050 CCDC28B -109646 3.63e-06 4.28e-06 3.31e-07 2.02e-06 6.12e-07 7.26e-07 2.54e-06 7.12e-07 2.36e-06 1.19e-06 3.09e-06 1.74e-06 4.81e-06 1.25e-06 9.23e-07 1.96e-06 1.34e-06 2.15e-06 1.29e-06 1.35e-06 1.34e-06 3.16e-06 3.36e-06 1.22e-06 4.53e-06 1.09e-06 1.5e-06 1.79e-06 2.91e-06 2.57e-06 1.92e-06 3.22e-07 5.87e-07 1.29e-06 1.65e-06 9.87e-07 7.83e-07 4.21e-07 1.23e-06 4.35e-07 2.26e-07 4.22e-06 6.18e-07 1.99e-07 2.74e-07 3.13e-07 4.87e-07 2.44e-07 2.27e-07
ENSG00000162520 SYNC -612856 2.64e-07 1.25e-07 3.59e-08 1.82e-07 9.01e-08 9.61e-08 1.42e-07 5.2e-08 1.4e-07 4.57e-08 1.56e-07 8.14e-08 1.41e-07 6.38e-08 5.84e-08 7.17e-08 3.88e-08 1.14e-07 5.36e-08 4.42e-08 1.08e-07 1.23e-07 1.32e-07 3.42e-08 1.33e-07 1.14e-07 1.12e-07 9.32e-08 1.05e-07 1.11e-07 9.73e-08 3.7e-08 3.56e-08 8.55e-08 8.76e-08 3.93e-08 5.37e-08 9.23e-08 6.54e-08 3.71e-08 5.42e-08 1.35e-07 4.14e-08 1.61e-08 5.7e-08 1.66e-08 1.23e-07 3.81e-09 4.9e-08
ENSG00000162522 KIAA1522 -651090 2.64e-07 1.16e-07 3.65e-08 1.8e-07 8.83e-08 9.87e-08 1.38e-07 5.19e-08 1.41e-07 4.4e-08 1.59e-07 7.78e-08 1.3e-07 6.38e-08 5.53e-08 7.26e-08 4.48e-08 1.14e-07 5.21e-08 4.07e-08 1.04e-07 1.26e-07 1.32e-07 3.79e-08 1.31e-07 1.19e-07 1.12e-07 9.15e-08 1.03e-07 1.12e-07 9.58e-08 3.96e-08 3.35e-08 8.49e-08 8.96e-08 3.76e-08 4.95e-08 9.22e-08 6.56e-08 3.98e-08 5.14e-08 1.33e-07 3.99e-08 1.2e-08 5.59e-08 1.68e-08 1.23e-07 3.86e-09 4.94e-08
ENSG00000168528 \N 681175 2.61e-07 1.16e-07 3.65e-08 1.82e-07 8.92e-08 9.71e-08 1.41e-07 5.33e-08 1.41e-07 4.38e-08 1.6e-07 7.75e-08 1.3e-07 6.21e-08 5.55e-08 7.5e-08 4.63e-08 1.14e-07 5.21e-08 4.2e-08 1.05e-07 1.27e-07 1.26e-07 4.05e-08 1.31e-07 1.19e-07 1.12e-07 8.71e-08 1.02e-07 1.1e-07 9.58e-08 4.22e-08 3.3e-08 8.65e-08 8.82e-08 3.77e-08 5.08e-08 9.62e-08 7.2e-08 3.37e-08 4.37e-08 1.31e-07 4.1e-08 1.38e-08 5.87e-08 1.69e-08 1.25e-07 3.89e-09 4.81e-08
ENSG00000183615 FAM167B -156482 1.4e-06 2.2e-06 2.74e-07 1.37e-06 3.73e-07 6.73e-07 1.26e-06 3.96e-07 1.73e-06 6.73e-07 2.07e-06 1.13e-06 2.56e-06 5.79e-07 4.52e-07 1.02e-06 9.41e-07 1.14e-06 6.6e-07 4.51e-07 7.49e-07 1.97e-06 1.46e-06 6.31e-07 2.41e-06 7.53e-07 1.02e-06 8.31e-07 1.63e-06 1.26e-06 8.83e-07 2.98e-07 2.98e-07 5.59e-07 6.86e-07 5.08e-07 7.36e-07 3.23e-07 5e-07 1.86e-07 3.68e-07 2.51e-06 2.19e-07 9.64e-08 2.74e-07 2.14e-07 2.24e-07 6.05e-08 1.55e-07
ENSG00000220785 MTMR9LP -150880 1.64e-06 2.43e-06 2.24e-07 1.48e-06 3.92e-07 6.47e-07 1.2e-06 4.54e-07 1.7e-06 7.11e-07 1.95e-06 1.32e-06 2.63e-06 7.96e-07 4.07e-07 1.02e-06 9.77e-07 1.13e-06 5.84e-07 4.81e-07 7.33e-07 1.87e-06 1.63e-06 6.86e-07 2.58e-06 8.08e-07 1.01e-06 8.7e-07 1.65e-06 1.36e-06 7.56e-07 2.95e-07 3.25e-07 5.66e-07 8.1e-07 5.3e-07 7.4e-07 2.97e-07 5.47e-07 2.22e-07 3.58e-07 2.73e-06 2.91e-07 1.06e-07 2.85e-07 2.36e-07 2.33e-07 1.15e-07 1.91e-07
ENSG00000222046 DCDC2B -118354 2.78e-06 3.66e-06 2.77e-07 1.91e-06 4.71e-07 7.26e-07 2.29e-06 6.11e-07 1.98e-06 9.61e-07 2.52e-06 1.45e-06 3.69e-06 1.36e-06 9.3e-07 1.63e-06 1.1e-06 2.29e-06 8.58e-07 1.15e-06 1.11e-06 3.02e-06 2.72e-06 1.07e-06 4.08e-06 1.27e-06 1.33e-06 1.67e-06 2.17e-06 2e-06 1.94e-06 2.5e-07 5.88e-07 1.21e-06 1.35e-06 8.85e-07 8.33e-07 4.49e-07 1.17e-06 3.76e-07 1.52e-07 4.16e-06 4.93e-07 1.67e-07 3.61e-07 3.26e-07 4.22e-07 2.2e-07 2.98e-07