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Genes within 1Mb (chr1:32026304:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000025800 KPNA6 -81752 sc-eQTL 3.59e-01 0.2 0.217 0.051 cDC L2
ENSG00000060688 SNRNP40 729516 sc-eQTL 1.07e-01 -0.336 0.207 0.051 cDC L2
ENSG00000084623 EIF3I -195624 sc-eQTL 7.02e-01 0.0672 0.175 0.051 cDC L2
ENSG00000084652 TXLNA -153371 sc-eQTL 7.88e-01 0.0613 0.228 0.051 cDC L2
ENSG00000116478 HDAC1 -265779 sc-eQTL 7.69e-01 -0.0588 0.2 0.051 cDC L2
ENSG00000116497 S100PBP -790463 sc-eQTL 8.86e-01 0.0308 0.214 0.051 cDC L2
ENSG00000116514 RNF19B -938381 sc-eQTL 8.53e-01 -0.0342 0.185 0.051 cDC L2
ENSG00000121766 ZCCHC17 729322 sc-eQTL 4.22e-01 0.182 0.226 0.051 cDC L2
ENSG00000121774 KHDRBS1 12436 sc-eQTL 8.36e-01 0.0339 0.164 0.051 cDC L2
ENSG00000121775 TMEM39B -45727 sc-eQTL 1.28e-01 0.297 0.194 0.051 cDC L2
ENSG00000134644 PUM1 960313 sc-eQTL 5.94e-01 0.104 0.194 0.051 cDC L2
ENSG00000134684 YARS -791849 sc-eQTL 6.24e-04 -0.729 0.209 0.051 cDC L2
ENSG00000160050 CCDC28B -174082 sc-eQTL 6.94e-01 -0.0854 0.216 0.051 cDC L2
ENSG00000160055 TMEM234 -196055 sc-eQTL 7.14e-01 0.0734 0.2 0.051 cDC L2
ENSG00000160058 BSDC1 -368427 sc-eQTL 7.94e-01 0.0573 0.219 0.051 cDC L2
ENSG00000160062 ZBTB8A -513123 sc-eQTL 1.49e-03 0.518 0.161 0.051 cDC L2
ENSG00000162517 PEF1 381408 sc-eQTL 5.67e-01 0.113 0.197 0.051 cDC L2
ENSG00000162520 SYNC -677292 sc-eQTL 8.02e-01 0.052 0.207 0.051 cDC L2
ENSG00000162521 RBBP4 -624838 sc-eQTL 4.12e-01 -0.147 0.178 0.051 cDC L2
ENSG00000162522 KIAA1522 -715526 sc-eQTL 9.90e-02 0.329 0.198 0.051 cDC L2
ENSG00000168528 SERINC2 616739 sc-eQTL 1.69e-01 -0.24 0.174 0.051 cDC L2
ENSG00000175130 MARCKSL1 -309929 sc-eQTL 5.31e-01 0.0863 0.137 0.051 cDC L2
ENSG00000176261 ZBTB8OS -624599 sc-eQTL 8.71e-01 0.0311 0.191 0.051 cDC L2
ENSG00000182866 LCK -224935 sc-eQTL 9.09e-01 0.0175 0.153 0.051 cDC L2
ENSG00000184007 PTP4A2 81448 sc-eQTL 5.24e-01 -0.105 0.165 0.051 cDC L2
ENSG00000225828 FAM229A -337974 sc-eQTL 5.09e-01 0.134 0.203 0.051 cDC L2
ENSG00000284543 LINC01226 520078 sc-eQTL 2.91e-01 -0.182 0.171 0.051 cDC L2
ENSG00000025800 KPNA6 -81752 sc-eQTL 5.70e-01 -0.146 0.257 0.055 gdT L2
ENSG00000060688 SNRNP40 729516 sc-eQTL 5.54e-01 0.153 0.259 0.055 gdT L2
ENSG00000084623 EIF3I -195624 sc-eQTL 4.63e-01 0.182 0.247 0.055 gdT L2
ENSG00000084652 TXLNA -153371 sc-eQTL 6.95e-02 0.404 0.221 0.055 gdT L2
ENSG00000116478 HDAC1 -265779 sc-eQTL 7.16e-01 0.0787 0.216 0.055 gdT L2
ENSG00000116497 S100PBP -790463 sc-eQTL 4.60e-01 -0.159 0.214 0.055 gdT L2
ENSG00000116514 RNF19B -938381 sc-eQTL 7.93e-01 -0.0555 0.211 0.055 gdT L2
ENSG00000121766 ZCCHC17 729322 sc-eQTL 5.70e-01 0.126 0.222 0.055 gdT L2
ENSG00000121774 KHDRBS1 12436 sc-eQTL 6.42e-01 0.0967 0.208 0.055 gdT L2
ENSG00000121775 TMEM39B -45727 sc-eQTL 7.65e-01 0.0696 0.233 0.055 gdT L2
ENSG00000134644 PUM1 960313 sc-eQTL 5.74e-01 0.129 0.229 0.055 gdT L2
ENSG00000134684 YARS -791849 sc-eQTL 4.65e-02 0.468 0.233 0.055 gdT L2
ENSG00000160050 CCDC28B -174082 sc-eQTL 5.47e-01 0.121 0.201 0.055 gdT L2
ENSG00000160055 TMEM234 -196055 sc-eQTL 5.02e-01 -0.157 0.233 0.055 gdT L2
ENSG00000160058 BSDC1 -368427 sc-eQTL 2.70e-04 0.853 0.228 0.055 gdT L2
ENSG00000162517 PEF1 381408 sc-eQTL 4.96e-01 -0.155 0.227 0.055 gdT L2
ENSG00000162520 SYNC -677292 sc-eQTL 3.55e-01 -0.215 0.232 0.055 gdT L2
ENSG00000162521 RBBP4 -624838 sc-eQTL 1.01e-01 -0.365 0.221 0.055 gdT L2
ENSG00000175130 MARCKSL1 -309929 sc-eQTL 7.86e-02 -0.378 0.213 0.055 gdT L2
ENSG00000176261 ZBTB8OS -624599 sc-eQTL 1.09e-03 -0.781 0.234 0.055 gdT L2
ENSG00000182866 LCK -224935 sc-eQTL 5.03e-01 -0.0949 0.141 0.055 gdT L2
ENSG00000184007 PTP4A2 81448 sc-eQTL 6.14e-01 0.0978 0.194 0.055 gdT L2
ENSG00000025800 KPNA6 -81752 sc-eQTL 5.47e-01 -0.119 0.197 0.054 pDC L2
ENSG00000060688 SNRNP40 729516 sc-eQTL 1.76e-01 -0.274 0.202 0.054 pDC L2
ENSG00000084623 EIF3I -195624 sc-eQTL 6.68e-01 0.0813 0.189 0.054 pDC L2
ENSG00000084652 TXLNA -153371 sc-eQTL 6.80e-01 -0.0802 0.194 0.054 pDC L2
ENSG00000116478 HDAC1 -265779 sc-eQTL 5.78e-01 0.111 0.2 0.054 pDC L2
ENSG00000116497 S100PBP -790463 sc-eQTL 4.48e-01 0.133 0.175 0.054 pDC L2
ENSG00000116514 RNF19B -938381 sc-eQTL 5.04e-01 -0.144 0.214 0.054 pDC L2
ENSG00000121766 ZCCHC17 729322 sc-eQTL 8.70e-01 -0.0366 0.222 0.054 pDC L2
ENSG00000121774 KHDRBS1 12436 sc-eQTL 7.07e-01 -0.0654 0.174 0.054 pDC L2
ENSG00000121775 TMEM39B -45727 sc-eQTL 9.63e-01 -0.00854 0.186 0.054 pDC L2
ENSG00000134644 PUM1 960313 sc-eQTL 2.81e-01 -0.199 0.184 0.054 pDC L2
ENSG00000134684 YARS -791849 sc-eQTL 5.65e-01 0.124 0.215 0.054 pDC L2
ENSG00000160050 CCDC28B -174082 sc-eQTL 8.72e-01 0.03 0.186 0.054 pDC L2
ENSG00000160055 TMEM234 -196055 sc-eQTL 2.55e-01 0.243 0.213 0.054 pDC L2
ENSG00000160058 BSDC1 -368427 sc-eQTL 6.03e-01 0.107 0.205 0.054 pDC L2
ENSG00000160062 ZBTB8A -513123 sc-eQTL 9.49e-01 -0.0117 0.183 0.054 pDC L2
ENSG00000162517 PEF1 381408 sc-eQTL 8.00e-01 0.0565 0.222 0.054 pDC L2
ENSG00000162520 SYNC -677292 sc-eQTL 5.87e-01 -0.105 0.193 0.054 pDC L2
ENSG00000162521 RBBP4 -624838 sc-eQTL 4.94e-01 -0.096 0.14 0.054 pDC L2
ENSG00000162522 KIAA1522 -715526 sc-eQTL 4.25e-01 0.156 0.195 0.054 pDC L2
ENSG00000168528 SERINC2 616739 sc-eQTL 5.35e-01 -0.129 0.208 0.054 pDC L2
ENSG00000175130 MARCKSL1 -309929 sc-eQTL 1.65e-01 -0.177 0.126 0.054 pDC L2
ENSG00000176261 ZBTB8OS -624599 sc-eQTL 3.61e-01 0.187 0.204 0.054 pDC L2
ENSG00000182866 LCK -224935 sc-eQTL 7.26e-01 -0.0554 0.158 0.054 pDC L2
ENSG00000184007 PTP4A2 81448 sc-eQTL 9.54e-01 -0.00971 0.167 0.054 pDC L2
ENSG00000225828 FAM229A -337974 sc-eQTL 6.92e-01 0.0805 0.203 0.054 pDC L2
ENSG00000284543 LINC01226 520078 sc-eQTL 7.07e-01 0.0608 0.161 0.054 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116478 HDAC1 -265779 eQTL 0.0361 0.0656 0.0313 0.0 0.0 0.0569
ENSG00000116497 S100PBP -790463 eQTL 0.00645 0.0798 0.0292 0.00129 0.0 0.0569
ENSG00000162522 KIAA1522 -715526 eQTL 0.0353 0.139 0.0659 0.0 0.0 0.0569
ENSG00000183615 FAM167B -220918 eQTL 0.0131 -0.197 0.0792 0.0 0.0 0.0569
ENSG00000220785 MTMR9LP -215316 eQTL 0.00188 -0.276 0.0884 0.0 0.0 0.0569
ENSG00000224066 AL049795.1 -180510 eQTL 0.0608 0.15 0.08 0.0013 0.0 0.0569
ENSG00000278966 AL031602.1 -947249 eQTL 0.00208 0.241 0.078 0.0 0.0 0.0569

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116478 HDAC1 -265779 1.31e-06 9.19e-07 1.55e-07 9.69e-07 1.07e-07 3.24e-07 7.25e-07 2.26e-07 7.56e-07 2.88e-07 1.09e-06 4.24e-07 1.16e-06 2.08e-07 4.21e-07 2.69e-07 6.83e-07 4.65e-07 3.51e-07 2.63e-07 2.41e-07 5.5e-07 4.59e-07 2.24e-07 1.28e-06 2.7e-07 4.34e-07 3.62e-07 5.42e-07 7.6e-07 3.93e-07 6.15e-08 5.78e-08 1.5e-07 3.32e-07 2.42e-07 2.9e-07 1.21e-07 1.54e-07 1.61e-08 8.02e-08 9.5e-07 1.09e-07 1.49e-07 1.58e-07 1.33e-08 1.17e-07 1.28e-08 6.46e-08