Genes within 1Mb (chr1:31904091:A:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000025800 KPNA6 -203965 eQTL 1.22e-02 0.0348 0.0139 0.0 0.0 0.164
ENSG00000060688 SNRNP40 607303 eQTL 4.59e-02 0.0434 0.0217 0.0 0.0 0.164
ENSG00000084623 EIF3I -317837 eQTL 1.27e-05 -0.0825 0.0188 0.013 0.0114 0.164
ENSG00000116478 HDAC1 -387992 eQTL 1.25e-02 0.0451 0.018 0.0 0.0 0.164
ENSG00000116497 S100PBP -912676 eQTL 2.36e-02 -0.0383 0.0169 0.0 0.0 0.164
ENSG00000121775 TMEM39B -167940 eQTL 4.29e-11 -0.17 0.0255 0.0 0.0 0.164
ENSG00000121900 TMEM54 -997347 eQTL 3.62e-02 0.0754 0.0359 0.0 0.0 0.164
ENSG00000134644 PUM1 838100 eQTL 4.17e-02 0.0372 0.0182 0.0 0.0 0.164
ENSG00000134668 SPOCD1 88040 eQTL 9.52e-04 -0.105 0.0318 0.0 0.0 0.164
ENSG00000160050 CCDC28B -296295 eQTL 2.05e-03 0.0847 0.0274 0.0 0.0 0.164
ENSG00000162512 SDC3 995333 eQTL 4.40e-03 0.0902 0.0316 0.00173 0.0 0.164
ENSG00000162520 SYNC -799505 eQTL 2.10e-08 -0.224 0.0396 0.00369 0.00191 0.164
ENSG00000162522 KIAA1522 -837739 eQTL 2.17e-14 -0.287 0.037 0.0 0.0 0.164
ENSG00000176261 ZBTB8OS -746812 eQTL 1.13e-02 -0.0414 0.0163 0.0 0.0 0.164
ENSG00000183615 FAM167B -343131 eQTL 2.83e-15 0.357 0.0444 0.0 0.0 0.164
ENSG00000220785 MTMR9LP -337529 eQTL 3.76e-59 0.777 0.0446 0.0 0.0 0.164
ENSG00000222046 DCDC2B -305003 eQTL 6.65e-04 0.112 0.0329 0.00134 0.0 0.164
ENSG00000224066 AL049795.1 -302723 eQTL 7.72e-04 0.155 0.046 0.00561 0.00696 0.164
ENSG00000269967 AL136115.2 -17750 eQTL 1.21e-02 -0.0851 0.0339 0.00229 0.0 0.164


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000084623 EIF3I -317837 1.32e-06 9.53e-07 3.41e-07 8.58e-07 2.95e-07 4.73e-07 1.34e-06 3.31e-07 1.35e-06 4.31e-07 1.49e-06 6.55e-07 1.98e-06 2.79e-07 5.65e-07 8.28e-07 8.54e-07 6.21e-07 6.96e-07 6.82e-07 6.17e-07 1.28e-06 9.26e-07 6.4e-07 1.95e-06 4.36e-07 7.66e-07 7.03e-07 1.24e-06 1.22e-06 6.16e-07 2.1e-07 2.15e-07 6.53e-07 5.8e-07 4.56e-07 5.12e-07 1.67e-07 3.34e-07 3.24e-07 2.8e-07 1.49e-06 5.07e-08 1.95e-08 1.79e-07 1.26e-07 2.22e-07 5.39e-08 1.25e-07
ENSG00000121775 TMEM39B -167940 3.61e-06 3.66e-06 5.96e-07 1.94e-06 7.24e-07 8.89e-07 2.53e-06 8.83e-07 2.44e-06 1.42e-06 3.14e-06 1.9e-06 5e-06 1.35e-06 9.24e-07 2.1e-06 1.58e-06 2.12e-06 1.57e-06 1.2e-06 1.54e-06 3.33e-06 3.09e-06 1.66e-06 4.05e-06 1.28e-06 1.59e-06 1.63e-06 3.22e-06 2.55e-06 1.91e-06 4.56e-07 6.07e-07 1.34e-06 1.74e-06 8.67e-07 9.25e-07 4.09e-07 1.25e-06 3.47e-07 2.26e-07 3.99e-06 6.22e-07 2.06e-07 3.63e-07 3.64e-07 8.93e-07 2.07e-07 1.77e-07
ENSG00000162512 SDC3 995333 2.67e-07 1.3e-07 4.91e-08 1.81e-07 9.79e-08 9.91e-08 1.53e-07 5.48e-08 1.45e-07 5.67e-08 1.54e-07 9.19e-08 1.47e-07 7.13e-08 6.12e-08 7.36e-08 4.09e-08 1.33e-07 5.97e-08 4.3e-08 1.22e-07 1.24e-07 1.44e-07 2.93e-08 1.5e-07 1.25e-07 1.07e-07 9.74e-08 1.16e-07 1.07e-07 9.92e-08 3.54e-08 3.89e-08 8.11e-08 5.64e-08 2.99e-08 5.59e-08 8.71e-08 6.63e-08 4.55e-08 5.41e-08 1.33e-07 5.2e-08 1.76e-08 3.42e-08 1.92e-08 1.19e-07 1.89e-09 5e-08
ENSG00000162520 SYNC -799505 3.02e-07 1.5e-07 5.91e-08 2.09e-07 9.94e-08 8.37e-08 1.9e-07 5.68e-08 1.44e-07 8.53e-08 1.62e-07 1.22e-07 1.95e-07 8.13e-08 5.43e-08 7.98e-08 4.31e-08 1.72e-07 7.09e-08 5.35e-08 1.18e-07 1.42e-07 1.62e-07 3.49e-08 1.85e-07 1.31e-07 1.17e-07 1.12e-07 1.34e-07 1.06e-07 1.06e-07 4.69e-08 3.29e-08 9.78e-08 3.57e-08 3.18e-08 4.06e-08 8.57e-08 6.39e-08 5.56e-08 6e-08 1.52e-07 4.7e-08 1.86e-08 3.36e-08 6.39e-09 8.74e-08 2.1e-09 4.94e-08
ENSG00000162521 \N -747051 3.14e-07 1.56e-07 6.41e-08 2.26e-07 1.05e-07 8.75e-08 2.16e-07 6.12e-08 1.66e-07 9.72e-08 1.66e-07 1.37e-07 2.29e-07 8.07e-08 5.97e-08 9.01e-08 4.25e-08 1.8e-07 7.29e-08 6.03e-08 1.24e-07 1.65e-07 1.64e-07 3.59e-08 2.09e-07 1.43e-07 1.22e-07 1.28e-07 1.32e-07 1.17e-07 1.21e-07 4.58e-08 3.74e-08 9.08e-08 5.16e-08 3.5e-08 4.54e-08 7.63e-08 6.21e-08 6.55e-08 5.1e-08 1.6e-07 3.55e-08 1.2e-08 3.34e-08 6.98e-09 7.92e-08 0.0 4.72e-08
ENSG00000162522 KIAA1522 -837739 2.91e-07 1.42e-07 5.82e-08 2.05e-07 1.03e-07 8.45e-08 1.81e-07 5.62e-08 1.5e-07 7.6e-08 1.67e-07 1.19e-07 1.79e-07 7.95e-08 5.94e-08 7.97e-08 4.45e-08 1.56e-07 7.12e-08 5.33e-08 1.22e-07 1.31e-07 1.58e-07 3.22e-08 1.68e-07 1.26e-07 1.17e-07 1.12e-07 1.26e-07 1.05e-07 1.07e-07 4.32e-08 3.13e-08 9.3e-08 3.12e-08 2.68e-08 4.62e-08 8.37e-08 6.3e-08 5.24e-08 5.65e-08 1.48e-07 5.22e-08 1.61e-08 3.29e-08 1.01e-08 9.96e-08 2.02e-09 4.85e-08
ENSG00000168528 \N 494526 8.43e-07 5.67e-07 1.04e-07 3.66e-07 9.86e-08 2.09e-07 5.28e-07 1.4e-07 4.19e-07 2.39e-07 6.28e-07 3.62e-07 7.19e-07 1.23e-07 2.15e-07 2.18e-07 3.13e-07 3.74e-07 1.97e-07 1.65e-07 2.05e-07 3.76e-07 3.3e-07 1.61e-07 6.65e-07 2.49e-07 2.58e-07 2.59e-07 3.58e-07 4.9e-07 2.73e-07 5.77e-08 4.42e-08 1.4e-07 3.4e-07 1.48e-07 1.06e-07 8.15e-08 6.38e-08 2.77e-08 8.61e-08 5.09e-07 2.47e-08 2.07e-08 1.41e-07 1.42e-08 1.1e-07 2.28e-08 5.86e-08
ENSG00000183615 FAM167B -343131 1.29e-06 9.39e-07 3.05e-07 5.88e-07 2.48e-07 4.63e-07 1.13e-06 3.26e-07 1.14e-06 3.71e-07 1.35e-06 5.98e-07 1.73e-06 2.55e-07 4.26e-07 7e-07 8.4e-07 5.75e-07 5.31e-07 6.97e-07 4.39e-07 1.08e-06 7.79e-07 5.79e-07 1.92e-06 3.66e-07 6.75e-07 7.22e-07 1.02e-06 1.07e-06 5.47e-07 1.72e-07 2.27e-07 4.91e-07 4.4e-07 4.59e-07 4.74e-07 1.25e-07 2.21e-07 1.92e-07 2.76e-07 1.5e-06 5.49e-08 1.24e-08 1.88e-07 1.22e-07 1.93e-07 8.93e-08 9.59e-08
ENSG00000220785 MTMR9LP -337529 1.33e-06 9.15e-07 3.22e-07 6.35e-07 2.53e-07 4.59e-07 1.15e-06 3.52e-07 1.15e-06 3.95e-07 1.35e-06 5.98e-07 1.76e-06 2.57e-07 4.19e-07 7.19e-07 7.88e-07 5.45e-07 5.54e-07 6.91e-07 4.44e-07 1.17e-06 7.76e-07 5.79e-07 1.94e-06 3.71e-07 6.7e-07 7.68e-07 1.07e-06 1.11e-06 5.79e-07 1.87e-07 2.43e-07 5.45e-07 4.49e-07 4.81e-07 4.92e-07 1.46e-07 2.78e-07 2.55e-07 3.17e-07 1.54e-06 5.62e-08 1.26e-08 1.74e-07 1.34e-07 1.97e-07 8.31e-08 1.06e-07
ENSG00000222046 DCDC2B -305003 1.24e-06 1e-06 3.14e-07 1e-06 3.51e-07 5.32e-07 1.52e-06 3.75e-07 1.44e-06 4.82e-07 1.74e-06 7.04e-07 2.16e-06 3e-07 5.31e-07 8.62e-07 9.33e-07 7.02e-07 7.7e-07 6.52e-07 7.16e-07 1.49e-06 8.68e-07 6.33e-07 2.16e-06 4.79e-07 8.73e-07 8.04e-07 1.32e-06 1.25e-06 6.97e-07 2.57e-07 2.02e-07 7.03e-07 5.69e-07 4.28e-07 5.61e-07 2.38e-07 3.74e-07 3.11e-07 2.87e-07 1.52e-06 9.55e-08 2.67e-08 2.47e-07 1.22e-07 2.42e-07 3.75e-08 1.68e-07