Genes within 1Mb (chr1:31903407:A:G):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121775 TMEM39B -168624 eQTL 1.81e-02 -0.0469 0.0198 0.0 0.0 0.422
ENSG00000134668 SPOCD1 87356 eQTL 3.74e-04 -0.0863 0.0242 0.0 0.0 0.422
ENSG00000160050 CCDC28B -296979 eQTL 4.49e-02 0.042 0.0209 0.0 0.0 0.422
ENSG00000162520 SYNC -800189 eQTL 1.52e-02 -0.0742 0.0305 0.0 0.0 0.422
ENSG00000162522 KIAA1522 -838423 eQTL 3.51e-02 -0.0611 0.0289 0.0 0.0 0.422
ENSG00000183615 FAM167B -343815 eQTL 1.53e-06 0.167 0.0345 0.0 0.0 0.422
ENSG00000184007 PTP4A2 -41449 eQTL 3.87e-02 0.0241 0.0116 0.0 0.0 0.422
ENSG00000220785 MTMR9LP -338213 eQTL 2.60e-13 0.281 0.0379 0.0 0.0 0.422
ENSG00000224066 AL049795.1 -303407 eQTL 7.64e-02 0.0623 0.0351 0.00109 0.0 0.422
ENSG00000228634 AL136115.1 -29613 eQTL 2.26e-02 -0.0775 0.0339 0.00177 0.0 0.422
ENSG00000269967 AL136115.2 -18434 eQTL 5.60e-03 -0.0715 0.0257 0.00288 0.0012 0.422


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162520 SYNC -800189 2.74e-07 1.11e-07 3.71e-08 1.82e-07 8.92e-08 9.61e-08 1.41e-07 5.35e-08 1.41e-07 4.38e-08 1.62e-07 8.03e-08 1.41e-07 6.21e-08 5.84e-08 7.26e-08 4.94e-08 1.14e-07 5.21e-08 4.07e-08 1.04e-07 1.27e-07 1.26e-07 4.53e-08 1.31e-07 1.14e-07 1.11e-07 9.32e-08 1.02e-07 1.09e-07 9.73e-08 4.07e-08 3.09e-08 8.55e-08 8.98e-08 4.02e-08 5.05e-08 9.68e-08 6.56e-08 3.18e-08 3.89e-08 1.35e-07 5.27e-08 1.26e-08 7.79e-08 1.83e-08 1.24e-07 3.86e-09 4.81e-08
ENSG00000183615 FAM167B -343815 1.25e-06 6.09e-07 1.27e-07 4.34e-07 1.08e-07 2.67e-07 4.53e-07 6.75e-08 2.75e-07 1.89e-07 3.47e-07 2.11e-07 8.6e-07 1.17e-07 2.18e-07 1.92e-07 9.53e-08 3.95e-07 1.77e-07 1.71e-07 2.52e-07 5.2e-07 3.11e-07 6.52e-08 7.01e-07 2.33e-07 2.62e-07 2.54e-07 2.76e-07 2.89e-07 3.1e-07 7.41e-08 5.58e-08 2.06e-07 3.52e-07 6.18e-08 1.31e-07 9.58e-08 7.9e-08 5.61e-08 1.23e-07 7.53e-07 6.58e-08 1.92e-08 5.49e-08 4.23e-08 9.1e-08 3.05e-08 6.32e-08
ENSG00000220785 MTMR9LP -338213 1.25e-06 6.26e-07 1.24e-07 4.31e-07 1.07e-07 2.95e-07 4.93e-07 6.72e-08 2.78e-07 2.06e-07 3.92e-07 2.28e-07 9.23e-07 1.23e-07 2.35e-07 2e-07 1.01e-07 4.2e-07 1.89e-07 1.78e-07 2.48e-07 5.18e-07 3.08e-07 7.22e-08 7.71e-07 2.36e-07 2.72e-07 2.65e-07 2.84e-07 3.15e-07 3.13e-07 7.12e-08 5.77e-08 2.12e-07 3.55e-07 6.94e-08 1.44e-07 1.09e-07 7.5e-08 5.25e-08 1.18e-07 7.22e-07 7.6e-08 1.94e-08 6.21e-08 4.38e-08 9.38e-08 3.13e-08 6.12e-08
ENSG00000269967 AL136115.2 -18434 3.49e-05 2.43e-05 5.06e-06 1.26e-05 4.7e-06 1.27e-05 3.25e-05 3.5e-06 2.07e-05 1.19e-05 2.68e-05 1.06e-05 3.35e-05 9.33e-06 5.97e-06 1.25e-05 1.2e-05 1.96e-05 6.02e-06 5.18e-06 1.12e-05 2.52e-05 2.27e-05 6.27e-06 3.32e-05 6.17e-06 9.65e-06 9.23e-06 2.34e-05 1.89e-05 1.31e-05 1.67e-06 2.07e-06 5.34e-06 9.01e-06 4.48e-06 2.15e-06 3.05e-06 3.52e-06 2.66e-06 1.66e-06 2.81e-05 2.99e-06 2.85e-07 2.1e-06 2.96e-06 3.35e-06 1.53e-06 1.38e-06