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Genes within 1Mb (chr1:30941125:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -355663 sc-eQTL 9.86e-01 -0.00146 0.0832 0.284 B L1
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 7.90e-01 0.0178 0.0666 0.284 B L1
ENSG00000134644 PUM1 -124866 sc-eQTL 1.11e-01 -0.0888 0.0556 0.284 B L1
ENSG00000162510 MATN1 217540 sc-eQTL 3.75e-01 0.0521 0.0587 0.284 B L1
ENSG00000162511 LAPTM5 183351 sc-eQTL 8.51e-01 0.00867 0.046 0.284 B L1
ENSG00000162517 PEF1 -703771 sc-eQTL 4.01e-01 0.0584 0.0694 0.284 B L1
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 7.23e-02 0.0967 0.0535 0.284 B L1
ENSG00000287510 AL137857.1 209432 sc-eQTL 4.03e-01 -0.0534 0.0637 0.284 B L1
ENSG00000060688 SNRNP40 -355663 sc-eQTL 7.12e-01 -0.0265 0.0716 0.284 CD4T L1
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 2.22e-01 0.0682 0.0557 0.284 CD4T L1
ENSG00000134644 PUM1 -124866 sc-eQTL 4.77e-01 -0.0354 0.0497 0.284 CD4T L1
ENSG00000162511 LAPTM5 183351 sc-eQTL 1.66e-01 -0.0764 0.0549 0.284 CD4T L1
ENSG00000162517 PEF1 -703771 sc-eQTL 4.87e-01 -0.0401 0.0576 0.284 CD4T L1
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 2.87e-02 0.107 0.0488 0.284 CD4T L1
ENSG00000287510 AL137857.1 209432 sc-eQTL 7.54e-01 -0.0185 0.0591 0.284 CD4T L1
ENSG00000060688 SNRNP40 -355663 sc-eQTL 8.83e-01 0.0139 0.0941 0.284 CD8T L1
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 6.36e-01 0.0296 0.0626 0.284 CD8T L1
ENSG00000134644 PUM1 -124866 sc-eQTL 1.89e-01 -0.0724 0.0549 0.284 CD8T L1
ENSG00000162511 LAPTM5 183351 sc-eQTL 5.13e-02 -0.104 0.0531 0.284 CD8T L1
ENSG00000162517 PEF1 -703771 sc-eQTL 1.11e-01 -0.105 0.0656 0.284 CD8T L1
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 6.79e-01 -0.026 0.0627 0.284 CD8T L1
ENSG00000287510 AL137857.1 209432 sc-eQTL 2.11e-02 0.181 0.0779 0.284 CD8T L1
ENSG00000060688 SNRNP40 -355663 sc-eQTL 4.65e-01 0.062 0.0847 0.275 DC L1
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 3.84e-01 0.0874 0.1 0.275 DC L1
ENSG00000134644 PUM1 -124866 sc-eQTL 7.93e-01 -0.0207 0.0786 0.275 DC L1
ENSG00000162511 LAPTM5 183351 sc-eQTL 1.96e-01 -0.0726 0.0559 0.275 DC L1
ENSG00000162517 PEF1 -703771 sc-eQTL 6.26e-01 0.0444 0.091 0.275 DC L1
ENSG00000168528 SERINC2 -468440 sc-eQTL 5.52e-01 -0.0551 0.0925 0.275 DC L1
ENSG00000284543 LINC01226 -565101 sc-eQTL 8.52e-01 0.0115 0.0613 0.275 DC L1
ENSG00000287510 AL137857.1 209432 sc-eQTL 8.69e-01 0.0146 0.0888 0.275 DC L1
ENSG00000060688 SNRNP40 -355663 sc-eQTL 3.56e-01 0.0604 0.0654 0.284 Mono L1
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 8.89e-01 -0.0113 0.0812 0.284 Mono L1
ENSG00000134644 PUM1 -124866 sc-eQTL 3.44e-01 -0.0492 0.0519 0.284 Mono L1
ENSG00000162511 LAPTM5 183351 sc-eQTL 3.38e-01 -0.0459 0.0478 0.284 Mono L1
ENSG00000162512 SDC3 32367 sc-eQTL 5.16e-02 0.178 0.0912 0.284 Mono L1
ENSG00000162517 PEF1 -703771 sc-eQTL 7.72e-01 0.0187 0.0645 0.284 Mono L1
ENSG00000168528 SERINC2 -468440 sc-eQTL 6.30e-01 -0.0477 0.0987 0.284 Mono L1
ENSG00000284543 LINC01226 -565101 sc-eQTL 7.24e-02 -0.156 0.0863 0.284 Mono L1
ENSG00000287510 AL137857.1 209432 sc-eQTL 6.18e-02 -0.142 0.0754 0.284 Mono L1
ENSG00000060688 SNRNP40 -355663 sc-eQTL 5.91e-02 -0.171 0.0904 0.283 NK L1
ENSG00000121753 ADGRB2 -823768 sc-eQTL 6.53e-01 -0.0353 0.0784 0.283 NK L1
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 5.93e-03 0.17 0.0613 0.283 NK L1
ENSG00000134644 PUM1 -124866 sc-eQTL 1.06e-01 -0.105 0.065 0.283 NK L1
ENSG00000162511 LAPTM5 183351 sc-eQTL 3.96e-01 -0.0639 0.0752 0.283 NK L1
ENSG00000162517 PEF1 -703771 sc-eQTL 8.54e-01 -0.0101 0.055 0.283 NK L1
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 8.75e-01 0.0133 0.0846 0.283 NK L1
ENSG00000287510 AL137857.1 209432 sc-eQTL 4.23e-01 -0.0626 0.078 0.283 NK L1
ENSG00000060688 SNRNP40 -355663 sc-eQTL 5.43e-01 -0.0416 0.0684 0.284 Other_T L1
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 4.92e-02 0.143 0.0725 0.284 Other_T L1
ENSG00000134644 PUM1 -124866 sc-eQTL 2.85e-01 -0.0703 0.0656 0.284 Other_T L1
ENSG00000162511 LAPTM5 183351 sc-eQTL 2.52e-01 -0.0617 0.0537 0.284 Other_T L1
ENSG00000162517 PEF1 -703771 sc-eQTL 4.53e-01 -0.0541 0.0719 0.284 Other_T L1
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 3.10e-01 0.0897 0.0881 0.284 Other_T L1
ENSG00000287510 AL137857.1 209432 sc-eQTL 8.50e-01 -0.0174 0.0919 0.284 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -355663 sc-eQTL 1.92e-01 -0.148 0.113 0.291 B_Activated L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 4.60e-01 0.0844 0.114 0.291 B_Activated L2
ENSG00000134644 PUM1 -124866 sc-eQTL 2.21e-01 0.13 0.106 0.291 B_Activated L2
ENSG00000162510 MATN1 217540 sc-eQTL 6.66e-01 -0.0401 0.0927 0.291 B_Activated L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 2.37e-01 -0.0764 0.0644 0.291 B_Activated L2
ENSG00000162517 PEF1 -703771 sc-eQTL 5.09e-02 0.214 0.109 0.291 B_Activated L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 9.28e-01 0.00941 0.104 0.291 B_Activated L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 4.77e-01 -0.0658 0.0923 0.291 B_Activated L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 5.32e-01 -0.0665 0.106 0.281 B_Intermediate L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 4.96e-01 0.0603 0.0886 0.281 B_Intermediate L2
ENSG00000134644 PUM1 -124866 sc-eQTL 8.59e-01 0.0148 0.0836 0.281 B_Intermediate L2
ENSG00000162510 MATN1 217540 sc-eQTL 7.09e-02 0.157 0.0864 0.281 B_Intermediate L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 6.34e-01 0.0254 0.0534 0.281 B_Intermediate L2
ENSG00000162517 PEF1 -703771 sc-eQTL 3.24e-01 -0.0979 0.099 0.281 B_Intermediate L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 9.52e-01 -0.00455 0.075 0.281 B_Intermediate L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 8.99e-01 0.0107 0.0839 0.281 B_Intermediate L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 9.09e-01 0.0116 0.101 0.282 B_Memory L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 4.43e-01 0.0715 0.0931 0.282 B_Memory L2
ENSG00000134644 PUM1 -124866 sc-eQTL 6.84e-02 -0.147 0.0805 0.282 B_Memory L2
ENSG00000162510 MATN1 217540 sc-eQTL 6.86e-01 -0.0315 0.0776 0.282 B_Memory L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 3.33e-01 0.0666 0.0686 0.282 B_Memory L2
ENSG00000162517 PEF1 -703771 sc-eQTL 8.12e-01 0.0218 0.0919 0.282 B_Memory L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 1.91e-01 -0.103 0.0784 0.282 B_Memory L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 5.93e-01 -0.0494 0.0921 0.282 B_Memory L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 3.68e-01 -0.0825 0.0914 0.284 B_Naive1 L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 5.55e-01 0.0467 0.079 0.284 B_Naive1 L2
ENSG00000134644 PUM1 -124866 sc-eQTL 4.73e-02 -0.138 0.0691 0.284 B_Naive1 L2
ENSG00000162510 MATN1 217540 sc-eQTL 5.46e-01 0.0428 0.0707 0.284 B_Naive1 L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 2.81e-01 -0.051 0.0471 0.284 B_Naive1 L2
ENSG00000162517 PEF1 -703771 sc-eQTL 6.08e-01 0.0428 0.0833 0.284 B_Naive1 L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 6.67e-02 0.114 0.0616 0.284 B_Naive1 L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 8.86e-01 0.011 0.0767 0.284 B_Naive1 L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 2.17e-02 0.223 0.0963 0.283 B_Naive2 L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 6.98e-01 0.0312 0.0804 0.283 B_Naive2 L2
ENSG00000134644 PUM1 -124866 sc-eQTL 8.75e-01 -0.0124 0.0787 0.283 B_Naive2 L2
ENSG00000162510 MATN1 217540 sc-eQTL 3.80e-01 -0.0664 0.0755 0.283 B_Naive2 L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 5.35e-01 -0.0319 0.0513 0.283 B_Naive2 L2
ENSG00000162517 PEF1 -703771 sc-eQTL 1.69e-01 0.128 0.093 0.283 B_Naive2 L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 9.47e-01 0.00496 0.0748 0.283 B_Naive2 L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 1.51e-02 -0.195 0.0796 0.283 B_Naive2 L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 8.62e-01 0.0167 0.0959 0.291 CD4_CTL L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 6.86e-01 -0.0382 0.0942 0.291 CD4_CTL L2
ENSG00000134644 PUM1 -124866 sc-eQTL 8.20e-01 -0.0211 0.0925 0.291 CD4_CTL L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 8.26e-01 -0.0182 0.0824 0.291 CD4_CTL L2
ENSG00000162517 PEF1 -703771 sc-eQTL 9.18e-01 -0.00867 0.0845 0.291 CD4_CTL L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 1.50e-03 0.283 0.0879 0.291 CD4_CTL L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 7.19e-01 -0.0287 0.0795 0.291 CD4_CTL L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 8.23e-01 -0.0168 0.0752 0.284 CD4_Naive L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 2.94e-01 0.07 0.0665 0.284 CD4_Naive L2
ENSG00000134644 PUM1 -124866 sc-eQTL 7.85e-01 0.0145 0.0532 0.284 CD4_Naive L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 1.29e-01 -0.0865 0.0567 0.284 CD4_Naive L2
ENSG00000162517 PEF1 -703771 sc-eQTL 6.79e-01 -0.0259 0.0625 0.284 CD4_Naive L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 2.79e-02 0.127 0.0572 0.284 CD4_Naive L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 7.30e-01 -0.023 0.0665 0.284 CD4_Naive L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 8.81e-01 0.014 0.0933 0.284 CD4_TCM L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 3.78e-01 -0.0663 0.0751 0.284 CD4_TCM L2
ENSG00000134644 PUM1 -124866 sc-eQTL 2.22e-02 -0.151 0.0657 0.284 CD4_TCM L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 4.62e-01 -0.0406 0.0552 0.284 CD4_TCM L2
ENSG00000162517 PEF1 -703771 sc-eQTL 4.22e-01 -0.0595 0.0739 0.284 CD4_TCM L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 2.01e-01 0.0895 0.0698 0.284 CD4_TCM L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 1.25e-01 -0.119 0.0776 0.284 CD4_TCM L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 1.34e-01 -0.139 0.0926 0.284 CD4_TEM L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 2.65e-01 0.0989 0.0884 0.284 CD4_TEM L2
ENSG00000134644 PUM1 -124866 sc-eQTL 5.37e-02 -0.142 0.0732 0.284 CD4_TEM L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 9.89e-02 -0.123 0.0743 0.284 CD4_TEM L2
ENSG00000162517 PEF1 -703771 sc-eQTL 8.42e-01 0.0168 0.0837 0.284 CD4_TEM L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 9.33e-01 0.00734 0.0874 0.284 CD4_TEM L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 8.18e-01 -0.0198 0.0861 0.284 CD4_TEM L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 8.99e-01 -0.0129 0.102 0.284 CD8_CTL L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 5.81e-02 -0.148 0.0777 0.284 CD8_CTL L2
ENSG00000134644 PUM1 -124866 sc-eQTL 4.67e-01 -0.0554 0.076 0.284 CD8_CTL L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 4.15e-03 -0.24 0.0827 0.284 CD8_CTL L2
ENSG00000162517 PEF1 -703771 sc-eQTL 6.24e-01 -0.036 0.0734 0.284 CD8_CTL L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 1.86e-01 0.117 0.0883 0.284 CD8_CTL L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 4.70e-01 0.0603 0.0833 0.284 CD8_CTL L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 5.22e-01 0.0599 0.0934 0.284 CD8_Naive L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 1.96e-01 0.104 0.0803 0.284 CD8_Naive L2
ENSG00000134644 PUM1 -124866 sc-eQTL 8.91e-01 -0.00894 0.0649 0.284 CD8_Naive L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 2.78e-02 -0.136 0.0615 0.284 CD8_Naive L2
ENSG00000162517 PEF1 -703771 sc-eQTL 9.79e-02 -0.143 0.0859 0.284 CD8_Naive L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 4.79e-01 -0.055 0.0776 0.284 CD8_Naive L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 4.52e-01 0.0636 0.0844 0.284 CD8_Naive L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 1.16e-01 0.174 0.11 0.28 CD8_TCM L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 4.01e-01 0.0852 0.101 0.28 CD8_TCM L2
ENSG00000134644 PUM1 -124866 sc-eQTL 5.87e-01 -0.0518 0.0952 0.28 CD8_TCM L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 2.38e-01 -0.118 0.0994 0.28 CD8_TCM L2
ENSG00000162517 PEF1 -703771 sc-eQTL 5.86e-02 -0.192 0.101 0.28 CD8_TCM L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 9.11e-01 -0.0104 0.0923 0.28 CD8_TCM L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 6.12e-01 0.0474 0.0933 0.28 CD8_TCM L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 2.53e-01 -0.114 0.0994 0.29 CD8_TEM L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 6.66e-01 0.0413 0.0956 0.29 CD8_TEM L2
ENSG00000134644 PUM1 -124866 sc-eQTL 3.27e-01 -0.0957 0.0975 0.29 CD8_TEM L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 4.97e-02 -0.18 0.091 0.29 CD8_TEM L2
ENSG00000162517 PEF1 -703771 sc-eQTL 5.42e-01 -0.0528 0.0865 0.29 CD8_TEM L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 8.29e-01 0.0206 0.0954 0.29 CD8_TEM L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 1.43e-01 0.126 0.0859 0.29 CD8_TEM L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 9.89e-01 -0.00135 0.101 0.288 MAIT L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 3.61e-01 0.0815 0.0891 0.288 MAIT L2
ENSG00000134644 PUM1 -124866 sc-eQTL 2.58e-01 -0.0967 0.0853 0.288 MAIT L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 9.18e-02 -0.136 0.0802 0.288 MAIT L2
ENSG00000162517 PEF1 -703771 sc-eQTL 4.66e-01 -0.0647 0.0886 0.288 MAIT L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 1.61e-01 0.126 0.0895 0.288 MAIT L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 7.91e-01 -0.0246 0.0927 0.288 MAIT L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 3.98e-01 -0.0861 0.102 0.282 NK_CD56bright L2
ENSG00000121753 ADGRB2 -823768 sc-eQTL 9.46e-01 0.00536 0.0797 0.282 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 6.83e-02 0.156 0.0853 0.282 NK_CD56bright L2
ENSG00000134644 PUM1 -124866 sc-eQTL 2.40e-01 -0.106 0.09 0.282 NK_CD56bright L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 2.12e-01 -0.111 0.0888 0.282 NK_CD56bright L2
ENSG00000162517 PEF1 -703771 sc-eQTL 9.04e-01 0.0105 0.0866 0.282 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 3.75e-01 0.0794 0.0894 0.282 NK_CD56bright L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 5.43e-01 0.0537 0.0882 0.282 NK_CD56bright L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 1.06e-02 -0.244 0.0948 0.282 NK_CD56dim L2
ENSG00000121753 ADGRB2 -823768 sc-eQTL 1.66e-01 -0.117 0.0843 0.282 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 4.95e-02 0.139 0.0705 0.282 NK_CD56dim L2
ENSG00000134644 PUM1 -124866 sc-eQTL 2.39e-01 -0.086 0.0728 0.282 NK_CD56dim L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 7.19e-01 -0.0281 0.0779 0.282 NK_CD56dim L2
ENSG00000162517 PEF1 -703771 sc-eQTL 6.89e-01 -0.0278 0.0693 0.282 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 9.01e-01 -0.0122 0.0976 0.282 NK_CD56dim L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 4.27e-01 -0.0639 0.0804 0.282 NK_CD56dim L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 5.57e-02 -0.194 0.101 0.295 NK_HLA L2
ENSG00000121753 ADGRB2 -823768 sc-eQTL 5.19e-01 -0.0521 0.0806 0.295 NK_HLA L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 8.91e-01 0.0125 0.0907 0.295 NK_HLA L2
ENSG00000134644 PUM1 -124866 sc-eQTL 1.14e-01 -0.139 0.0878 0.295 NK_HLA L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 3.02e-01 -0.0871 0.0841 0.295 NK_HLA L2
ENSG00000162517 PEF1 -703771 sc-eQTL 3.75e-02 0.197 0.094 0.295 NK_HLA L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 3.66e-01 -0.0811 0.0895 0.295 NK_HLA L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 2.16e-01 -0.107 0.0864 0.295 NK_HLA L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 4.48e-01 0.0711 0.0936 0.282 NK_cytokine L2
ENSG00000121753 ADGRB2 -823768 sc-eQTL 5.31e-01 0.0531 0.0846 0.282 NK_cytokine L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 2.06e-01 0.0925 0.0729 0.282 NK_cytokine L2
ENSG00000134644 PUM1 -124866 sc-eQTL 4.11e-01 -0.0651 0.079 0.282 NK_cytokine L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 2.79e-02 -0.191 0.0861 0.282 NK_cytokine L2
ENSG00000162517 PEF1 -703771 sc-eQTL 5.06e-01 -0.0494 0.0741 0.282 NK_cytokine L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 5.12e-01 -0.0606 0.0922 0.282 NK_cytokine L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 3.52e-02 -0.18 0.085 0.282 NK_cytokine L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 8.80e-01 0.0161 0.107 0.3 PB L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 9.55e-01 0.007 0.124 0.3 PB L2
ENSG00000134644 PUM1 -124866 sc-eQTL 8.14e-01 -0.0254 0.108 0.3 PB L2
ENSG00000162510 MATN1 217540 sc-eQTL 4.98e-01 0.068 0.1 0.3 PB L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 8.74e-01 -0.0114 0.0716 0.3 PB L2
ENSG00000162517 PEF1 -703771 sc-eQTL 6.92e-01 0.0438 0.11 0.3 PB L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 3.99e-01 0.0827 0.0977 0.3 PB L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 8.22e-02 0.181 0.103 0.3 PB L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 1.04e-01 -0.12 0.0736 0.285 Pro_T L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 1.55e-03 0.294 0.0918 0.285 Pro_T L2
ENSG00000134644 PUM1 -124866 sc-eQTL 7.50e-01 0.028 0.0877 0.285 Pro_T L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 8.38e-01 -0.0129 0.0629 0.285 Pro_T L2
ENSG00000162517 PEF1 -703771 sc-eQTL 2.89e-01 0.0978 0.0921 0.285 Pro_T L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 8.78e-01 0.0136 0.0879 0.285 Pro_T L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 6.93e-01 0.032 0.0808 0.285 Pro_T L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 7.14e-01 0.0354 0.0963 0.284 Treg L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 5.62e-01 0.0541 0.0931 0.284 Treg L2
ENSG00000134644 PUM1 -124866 sc-eQTL 4.10e-01 0.0614 0.0745 0.284 Treg L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 1.44e-02 -0.208 0.0842 0.284 Treg L2
ENSG00000162517 PEF1 -703771 sc-eQTL 3.31e-01 -0.0897 0.0921 0.284 Treg L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 8.38e-01 -0.0178 0.087 0.284 Treg L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 2.27e-01 0.105 0.0866 0.284 Treg L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 2.04e-01 0.128 0.1 0.273 cDC L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 4.62e-01 0.0804 0.109 0.273 cDC L2
ENSG00000134644 PUM1 -124866 sc-eQTL 3.41e-01 -0.0893 0.0935 0.273 cDC L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 7.01e-01 0.0253 0.0657 0.273 cDC L2
ENSG00000162517 PEF1 -703771 sc-eQTL 5.50e-01 -0.0569 0.0951 0.273 cDC L2
ENSG00000168528 SERINC2 -468440 sc-eQTL 6.96e-01 0.033 0.0844 0.273 cDC L2
ENSG00000284543 LINC01226 -565101 sc-eQTL 2.05e-01 0.105 0.0826 0.273 cDC L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 4.29e-01 -0.0706 0.0891 0.273 cDC L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 8.05e-01 0.0195 0.079 0.284 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 4.80e-02 0.174 0.0874 0.284 cMono_IL1B L2
ENSG00000134644 PUM1 -124866 sc-eQTL 4.64e-01 -0.0437 0.0596 0.284 cMono_IL1B L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 2.87e-01 -0.0557 0.0522 0.284 cMono_IL1B L2
ENSG00000162512 SDC3 32367 sc-eQTL 8.30e-02 0.171 0.098 0.284 cMono_IL1B L2
ENSG00000162517 PEF1 -703771 sc-eQTL 9.30e-01 0.00705 0.0806 0.284 cMono_IL1B L2
ENSG00000168528 SERINC2 -468440 sc-eQTL 6.94e-01 -0.0393 0.0998 0.284 cMono_IL1B L2
ENSG00000284543 LINC01226 -565101 sc-eQTL 1.20e-01 -0.137 0.0878 0.284 cMono_IL1B L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 1.52e-01 -0.118 0.082 0.284 cMono_IL1B L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 6.73e-01 -0.0352 0.0833 0.284 cMono_S100A L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 2.28e-02 -0.223 0.0973 0.284 cMono_S100A L2
ENSG00000134644 PUM1 -124866 sc-eQTL 8.18e-01 0.0164 0.0712 0.284 cMono_S100A L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 6.65e-01 -0.0237 0.0547 0.284 cMono_S100A L2
ENSG00000162512 SDC3 32367 sc-eQTL 3.50e-01 0.0884 0.0943 0.284 cMono_S100A L2
ENSG00000162517 PEF1 -703771 sc-eQTL 3.27e-01 0.0837 0.0852 0.284 cMono_S100A L2
ENSG00000168528 SERINC2 -468440 sc-eQTL 3.59e-01 -0.0919 0.0999 0.284 cMono_S100A L2
ENSG00000284543 LINC01226 -565101 sc-eQTL 3.13e-01 -0.082 0.0811 0.284 cMono_S100A L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 3.28e-01 -0.0798 0.0814 0.284 cMono_S100A L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 2.42e-01 0.147 0.126 0.276 gdT L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 1.83e-01 -0.144 0.108 0.276 gdT L2
ENSG00000134644 PUM1 -124866 sc-eQTL 5.61e-01 0.065 0.112 0.276 gdT L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 2.35e-01 -0.144 0.121 0.276 gdT L2
ENSG00000162517 PEF1 -703771 sc-eQTL 2.05e-01 -0.141 0.11 0.276 gdT L2
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 2.08e-01 0.141 0.111 0.276 gdT L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 4.97e-02 0.212 0.107 0.276 gdT L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 6.52e-01 0.0421 0.0931 0.28 intMono L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 7.51e-02 -0.178 0.0993 0.28 intMono L2
ENSG00000134644 PUM1 -124866 sc-eQTL 1.43e-01 -0.124 0.0845 0.28 intMono L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 3.02e-01 -0.0688 0.0664 0.28 intMono L2
ENSG00000162512 SDC3 32367 sc-eQTL 3.84e-01 0.0794 0.091 0.28 intMono L2
ENSG00000162517 PEF1 -703771 sc-eQTL 5.23e-01 -0.0612 0.0957 0.28 intMono L2
ENSG00000168528 SERINC2 -468440 sc-eQTL 7.17e-01 -0.0347 0.0954 0.28 intMono L2
ENSG00000284543 LINC01226 -565101 sc-eQTL 5.13e-01 0.0592 0.0904 0.28 intMono L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 8.83e-01 -0.0133 0.0905 0.28 intMono L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 6.24e-01 -0.0429 0.0874 0.285 ncMono L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 7.92e-01 -0.0246 0.0932 0.285 ncMono L2
ENSG00000134644 PUM1 -124866 sc-eQTL 1.63e-01 -0.106 0.0758 0.285 ncMono L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 3.10e-02 -0.149 0.0684 0.285 ncMono L2
ENSG00000162512 SDC3 32367 sc-eQTL 3.10e-02 0.167 0.0767 0.285 ncMono L2
ENSG00000162517 PEF1 -703771 sc-eQTL 7.68e-01 -0.0262 0.0889 0.285 ncMono L2
ENSG00000168528 SERINC2 -468440 sc-eQTL 6.78e-01 -0.0352 0.0846 0.285 ncMono L2
ENSG00000284543 LINC01226 -565101 sc-eQTL 5.14e-01 -0.0553 0.0845 0.285 ncMono L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 6.17e-01 -0.0438 0.0876 0.285 ncMono L2
ENSG00000060688 SNRNP40 -355663 sc-eQTL 8.94e-01 -0.0136 0.102 0.266 pDC L2
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 9.41e-01 0.0083 0.112 0.266 pDC L2
ENSG00000134644 PUM1 -124866 sc-eQTL 9.94e-01 0.000686 0.0926 0.266 pDC L2
ENSG00000162511 LAPTM5 183351 sc-eQTL 3.87e-01 -0.0745 0.0859 0.266 pDC L2
ENSG00000162517 PEF1 -703771 sc-eQTL 7.73e-02 0.197 0.111 0.266 pDC L2
ENSG00000168528 SERINC2 -468440 sc-eQTL 4.38e-01 -0.081 0.104 0.266 pDC L2
ENSG00000284543 LINC01226 -565101 sc-eQTL 1.31e-01 0.122 0.0805 0.266 pDC L2
ENSG00000287510 AL137857.1 209432 sc-eQTL 9.43e-01 0.0068 0.0954 0.266 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -355663 sc-eQTL 3.60e-01 -0.092 0.1 0.284 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 1.60e-01 0.117 0.0832 0.284 B_Memory LOneK1K
ENSG00000134644 PUM1 -124866 sc-eQTL 2.23e-01 -0.0902 0.0739 0.284 B_Memory LOneK1K
ENSG00000162510 MATN1 217540 sc-eQTL 3.43e-01 0.0802 0.0843 0.284 B_Memory LOneK1K
ENSG00000162511 LAPTM5 183351 sc-eQTL 2.49e-01 0.0612 0.0529 0.284 B_Memory LOneK1K
ENSG00000162517 PEF1 -703771 sc-eQTL 7.97e-01 -0.0226 0.0879 0.284 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 7.16e-01 -0.0255 0.0702 0.284 B_Memory LOneK1K
ENSG00000287510 AL137857.1 209432 sc-eQTL 5.51e-01 -0.0456 0.0765 0.284 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -355663 sc-eQTL 3.16e-01 0.0894 0.0889 0.284 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 8.36e-01 0.0146 0.0704 0.284 B_Naive LOneK1K
ENSG00000134644 PUM1 -124866 sc-eQTL 5.96e-02 -0.125 0.0661 0.284 B_Naive LOneK1K
ENSG00000162510 MATN1 217540 sc-eQTL 7.94e-01 0.0168 0.0641 0.284 B_Naive LOneK1K
ENSG00000162511 LAPTM5 183351 sc-eQTL 2.03e-01 -0.0574 0.045 0.284 B_Naive LOneK1K
ENSG00000162517 PEF1 -703771 sc-eQTL 2.33e-01 0.0983 0.0822 0.284 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 8.51e-02 0.1 0.0579 0.284 B_Naive LOneK1K
ENSG00000287510 AL137857.1 209432 sc-eQTL 3.15e-01 -0.0697 0.0691 0.284 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -355663 sc-eQTL 8.73e-01 0.012 0.075 0.284 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 8.41e-01 0.017 0.0849 0.284 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -124866 sc-eQTL 7.40e-01 -0.018 0.0542 0.284 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 183351 sc-eQTL 6.96e-01 -0.0187 0.0476 0.284 CD14_Mono LOneK1K
ENSG00000162512 SDC3 32367 sc-eQTL 3.41e-02 0.205 0.0962 0.284 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -703771 sc-eQTL 5.97e-01 0.0361 0.0683 0.284 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -468440 sc-eQTL 5.61e-01 -0.0582 0.0999 0.284 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -565101 sc-eQTL 8.33e-02 -0.142 0.0814 0.284 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 209432 sc-eQTL 1.69e-01 -0.106 0.0764 0.284 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -355663 sc-eQTL 7.65e-01 0.0245 0.0818 0.282 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 5.01e-01 -0.0603 0.0894 0.282 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -124866 sc-eQTL 1.32e-01 -0.11 0.0729 0.282 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 183351 sc-eQTL 1.58e-01 -0.0828 0.0584 0.282 CD16_Mono LOneK1K
ENSG00000162512 SDC3 32367 sc-eQTL 1.87e-01 0.113 0.0853 0.282 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -703771 sc-eQTL 7.31e-01 -0.0268 0.0778 0.282 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -468440 sc-eQTL 9.76e-01 -0.00273 0.0889 0.282 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -565101 sc-eQTL 5.65e-01 -0.0486 0.0843 0.282 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 209432 sc-eQTL 3.04e-01 -0.0868 0.0842 0.282 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -355663 sc-eQTL 9.47e-02 -0.152 0.0905 0.282 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -823768 sc-eQTL 5.64e-01 -0.0447 0.0775 0.282 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -355857 sc-eQTL 2.64e-02 0.137 0.0615 0.282 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -124866 sc-eQTL 1.71e-01 -0.0933 0.0678 0.282 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 183351 sc-eQTL 5.80e-01 -0.0422 0.0761 0.282 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -703771 sc-eQTL 5.73e-01 -0.0326 0.0578 0.282 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 222621 sc-eQTL 8.21e-01 -0.0199 0.0878 0.282 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 209432 sc-eQTL 1.92e-01 -0.0989 0.0755 0.282 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162512 SDC3 32367 eQTL 1.72e-07 0.137 0.0261 0.0 0.0 0.306
ENSG00000228634 AL136115.1 -991895 eQTL 0.0586 0.0704 0.0372 0.00116 0.0 0.306

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162512 SDC3 32367 3.27e-05 3.07e-05 6e-06 1.54e-05 5.81e-06 1.46e-05 4.22e-05 4.86e-06 3.01e-05 1.55e-05 3.76e-05 1.65e-05 4.8e-05 1.28e-05 6.95e-06 1.79e-05 1.58e-05 2.42e-05 7.94e-06 6.75e-06 1.42e-05 3.17e-05 2.94e-05 8.57e-06 4.33e-05 8.09e-06 1.44e-05 1.28e-05 3.23e-05 2.32e-05 2e-05 1.63e-06 2.75e-06 7.08e-06 1.16e-05 5.68e-06 3.16e-06 3.14e-06 4.75e-06 3.57e-06 1.71e-06 3.51e-05 3.39e-06 4.37e-07 2.59e-06 4.04e-06 4.05e-06 1.69e-06 1.5e-06
ENSG00000228634 AL136115.1 -991895 3.07e-07 1.76e-07 8.99e-08 2.53e-07 1.02e-07 1.25e-07 2.63e-07 7.98e-08 2.01e-07 1.28e-07 2.18e-07 1.62e-07 2.74e-07 8.66e-08 6.93e-08 1.06e-07 8.42e-08 2.33e-07 7.76e-08 7.05e-08 1.34e-07 1.98e-07 1.69e-07 4.17e-08 2.36e-07 1.82e-07 1.74e-07 1.52e-07 1.37e-07 1.8e-07 1.35e-07 5.24e-08 4.34e-08 9.98e-08 1.29e-07 4.95e-08 5.96e-08 7.51e-08 5.27e-08 8.61e-08 6.28e-08 1.55e-07 1.65e-08 1.73e-08 4.91e-08 8.59e-09 8.21e-08 0.0 4.61e-08