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Genes within 1Mb (chr1:30940801:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -355987 sc-eQTL 4.80e-01 -0.0791 0.112 0.87 B L1
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 8.75e-02 -0.153 0.0891 0.87 B L1
ENSG00000134644 PUM1 -125190 sc-eQTL 9.89e-01 0.00104 0.0752 0.87 B L1
ENSG00000162510 MATN1 217216 sc-eQTL 2.76e-01 0.0861 0.0789 0.87 B L1
ENSG00000162511 LAPTM5 183027 sc-eQTL 3.17e-01 0.0619 0.0618 0.87 B L1
ENSG00000162517 PEF1 -704095 sc-eQTL 5.39e-01 -0.0575 0.0934 0.87 B L1
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 5.15e-01 0.0473 0.0725 0.87 B L1
ENSG00000287510 AL137857.1 209108 sc-eQTL 4.85e-01 -0.06 0.0858 0.87 B L1
ENSG00000060688 SNRNP40 -355987 sc-eQTL 7.52e-01 -0.0302 0.0952 0.87 CD4T L1
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 3.83e-01 0.0649 0.0743 0.87 CD4T L1
ENSG00000134644 PUM1 -125190 sc-eQTL 2.67e-02 0.146 0.0655 0.87 CD4T L1
ENSG00000162511 LAPTM5 183027 sc-eQTL 6.44e-01 -0.0339 0.0734 0.87 CD4T L1
ENSG00000162517 PEF1 -704095 sc-eQTL 4.12e-01 -0.063 0.0766 0.87 CD4T L1
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 5.36e-01 -0.0407 0.0656 0.87 CD4T L1
ENSG00000287510 AL137857.1 209108 sc-eQTL 4.03e-01 -0.0658 0.0785 0.87 CD4T L1
ENSG00000060688 SNRNP40 -355987 sc-eQTL 5.09e-01 -0.0833 0.126 0.87 CD8T L1
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 8.55e-01 0.0153 0.0838 0.87 CD8T L1
ENSG00000134644 PUM1 -125190 sc-eQTL 9.72e-02 0.122 0.0733 0.87 CD8T L1
ENSG00000162511 LAPTM5 183027 sc-eQTL 4.90e-01 0.0495 0.0716 0.87 CD8T L1
ENSG00000162517 PEF1 -704095 sc-eQTL 8.72e-01 -0.0143 0.0883 0.87 CD8T L1
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 6.69e-01 0.0359 0.0839 0.87 CD8T L1
ENSG00000287510 AL137857.1 209108 sc-eQTL 8.30e-01 -0.0227 0.106 0.87 CD8T L1
ENSG00000060688 SNRNP40 -355987 sc-eQTL 8.05e-01 -0.0274 0.11 0.865 DC L1
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 9.95e-01 0.000791 0.131 0.865 DC L1
ENSG00000134644 PUM1 -125190 sc-eQTL 3.92e-01 -0.0877 0.102 0.865 DC L1
ENSG00000162511 LAPTM5 183027 sc-eQTL 9.73e-01 -0.00251 0.0731 0.865 DC L1
ENSG00000162517 PEF1 -704095 sc-eQTL 6.12e-01 0.0602 0.119 0.865 DC L1
ENSG00000168528 SERINC2 -468764 sc-eQTL 2.02e-01 0.154 0.12 0.865 DC L1
ENSG00000284543 LINC01226 -565425 sc-eQTL 9.62e-01 -0.00385 0.0799 0.865 DC L1
ENSG00000287510 AL137857.1 209108 sc-eQTL 8.11e-01 0.0278 0.116 0.865 DC L1
ENSG00000060688 SNRNP40 -355987 sc-eQTL 8.17e-01 0.02 0.086 0.87 Mono L1
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 8.64e-01 -0.0183 0.107 0.87 Mono L1
ENSG00000134644 PUM1 -125190 sc-eQTL 3.13e-01 -0.0689 0.0682 0.87 Mono L1
ENSG00000162511 LAPTM5 183027 sc-eQTL 7.28e-01 0.0219 0.0628 0.87 Mono L1
ENSG00000162512 SDC3 32043 sc-eQTL 8.68e-04 -0.397 0.118 0.87 Mono L1
ENSG00000162517 PEF1 -704095 sc-eQTL 9.26e-01 -0.00786 0.0847 0.87 Mono L1
ENSG00000168528 SERINC2 -468764 sc-eQTL 9.63e-01 0.00602 0.13 0.87 Mono L1
ENSG00000284543 LINC01226 -565425 sc-eQTL 4.27e-01 -0.0907 0.114 0.87 Mono L1
ENSG00000287510 AL137857.1 209108 sc-eQTL 9.08e-01 -0.0115 0.0998 0.87 Mono L1
ENSG00000060688 SNRNP40 -355987 sc-eQTL 6.56e-02 -0.222 0.12 0.869 NK L1
ENSG00000121753 ADGRB2 -824092 sc-eQTL 5.10e-01 0.0685 0.104 0.869 NK L1
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 7.60e-01 0.0253 0.0826 0.869 NK L1
ENSG00000134644 PUM1 -125190 sc-eQTL 5.18e-01 0.0561 0.0866 0.869 NK L1
ENSG00000162511 LAPTM5 183027 sc-eQTL 4.49e-02 0.199 0.0988 0.869 NK L1
ENSG00000162517 PEF1 -704095 sc-eQTL 9.95e-01 -0.000475 0.0728 0.869 NK L1
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 3.16e-01 0.112 0.112 0.869 NK L1
ENSG00000287510 AL137857.1 209108 sc-eQTL 3.14e-01 -0.104 0.103 0.869 NK L1
ENSG00000060688 SNRNP40 -355987 sc-eQTL 3.77e-01 -0.0803 0.0908 0.87 Other_T L1
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 9.85e-01 -0.00179 0.0972 0.87 Other_T L1
ENSG00000134644 PUM1 -125190 sc-eQTL 2.18e-01 0.108 0.0871 0.87 Other_T L1
ENSG00000162511 LAPTM5 183027 sc-eQTL 9.91e-01 0.000853 0.0716 0.87 Other_T L1
ENSG00000162517 PEF1 -704095 sc-eQTL 1.01e-01 0.157 0.0951 0.87 Other_T L1
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 7.29e-01 0.0408 0.117 0.87 Other_T L1
ENSG00000287510 AL137857.1 209108 sc-eQTL 8.08e-01 -0.0298 0.122 0.87 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -355987 sc-eQTL 4.85e-01 -0.105 0.15 0.872 B_Activated L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 7.63e-01 -0.0456 0.151 0.872 B_Activated L2
ENSG00000134644 PUM1 -125190 sc-eQTL 7.07e-01 -0.053 0.141 0.872 B_Activated L2
ENSG00000162510 MATN1 217216 sc-eQTL 3.69e-01 -0.11 0.123 0.872 B_Activated L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 1.32e-01 -0.129 0.0851 0.872 B_Activated L2
ENSG00000162517 PEF1 -704095 sc-eQTL 7.02e-01 -0.0558 0.146 0.872 B_Activated L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 5.00e-04 -0.474 0.134 0.872 B_Activated L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 1.75e-01 -0.166 0.122 0.872 B_Activated L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 2.71e-01 -0.15 0.136 0.869 B_Intermediate L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 9.74e-01 -0.00368 0.113 0.869 B_Intermediate L2
ENSG00000134644 PUM1 -125190 sc-eQTL 3.67e-01 -0.0964 0.107 0.869 B_Intermediate L2
ENSG00000162510 MATN1 217216 sc-eQTL 5.20e-01 -0.0716 0.111 0.869 B_Intermediate L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 8.76e-01 0.0107 0.0683 0.869 B_Intermediate L2
ENSG00000162517 PEF1 -704095 sc-eQTL 1.13e-01 -0.201 0.126 0.869 B_Intermediate L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 4.84e-01 0.0671 0.0957 0.869 B_Intermediate L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 3.55e-01 -0.0992 0.107 0.869 B_Intermediate L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 3.83e-01 0.114 0.13 0.869 B_Memory L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 5.81e-01 -0.0665 0.12 0.869 B_Memory L2
ENSG00000134644 PUM1 -125190 sc-eQTL 9.38e-01 -0.00813 0.105 0.869 B_Memory L2
ENSG00000162510 MATN1 217216 sc-eQTL 2.67e-01 0.111 0.0999 0.869 B_Memory L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 2.35e-01 0.105 0.0885 0.869 B_Memory L2
ENSG00000162517 PEF1 -704095 sc-eQTL 6.92e-01 -0.047 0.119 0.869 B_Memory L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 5.41e-03 -0.28 0.0997 0.869 B_Memory L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 4.22e-01 0.0955 0.119 0.869 B_Memory L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 3.28e-01 -0.119 0.121 0.87 B_Naive1 L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 5.71e-01 -0.0594 0.105 0.87 B_Naive1 L2
ENSG00000134644 PUM1 -125190 sc-eQTL 7.22e-01 -0.033 0.0924 0.87 B_Naive1 L2
ENSG00000162510 MATN1 217216 sc-eQTL 3.24e-01 0.0926 0.0936 0.87 B_Naive1 L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 8.74e-01 0.00992 0.0627 0.87 B_Naive1 L2
ENSG00000162517 PEF1 -704095 sc-eQTL 2.99e-01 0.115 0.11 0.87 B_Naive1 L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 2.23e-01 0.1 0.082 0.87 B_Naive1 L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 7.97e-01 -0.0261 0.102 0.87 B_Naive1 L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 9.44e-01 0.00919 0.13 0.869 B_Naive2 L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 4.74e-01 -0.0771 0.107 0.869 B_Naive2 L2
ENSG00000134644 PUM1 -125190 sc-eQTL 3.40e-01 0.101 0.105 0.869 B_Naive2 L2
ENSG00000162510 MATN1 217216 sc-eQTL 5.33e-02 -0.195 0.1 0.869 B_Naive2 L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 6.96e-01 -0.0269 0.0686 0.869 B_Naive2 L2
ENSG00000162517 PEF1 -704095 sc-eQTL 6.03e-01 -0.065 0.125 0.869 B_Naive2 L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 7.43e-01 -0.0328 0.0999 0.869 B_Naive2 L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 4.68e-01 -0.0785 0.108 0.869 B_Naive2 L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 6.50e-01 0.0592 0.13 0.868 CD4_CTL L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 5.57e-01 0.0754 0.128 0.868 CD4_CTL L2
ENSG00000134644 PUM1 -125190 sc-eQTL 5.01e-01 0.0847 0.126 0.868 CD4_CTL L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 9.98e-01 0.000269 0.112 0.868 CD4_CTL L2
ENSG00000162517 PEF1 -704095 sc-eQTL 6.97e-01 -0.0447 0.115 0.868 CD4_CTL L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 5.53e-01 0.0728 0.122 0.868 CD4_CTL L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 9.47e-01 -0.00715 0.108 0.868 CD4_CTL L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 4.56e-01 -0.0745 0.0998 0.87 CD4_Naive L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 3.03e-01 0.0913 0.0884 0.87 CD4_Naive L2
ENSG00000134644 PUM1 -125190 sc-eQTL 2.03e-02 0.163 0.0699 0.87 CD4_Naive L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 2.61e-01 -0.0851 0.0756 0.87 CD4_Naive L2
ENSG00000162517 PEF1 -704095 sc-eQTL 1.61e-01 -0.117 0.0828 0.87 CD4_Naive L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 3.45e-01 -0.0726 0.0768 0.87 CD4_Naive L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 6.24e-01 -0.0433 0.0883 0.87 CD4_Naive L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 3.90e-01 0.108 0.125 0.87 CD4_TCM L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 1.51e-01 0.145 0.1 0.87 CD4_TCM L2
ENSG00000134644 PUM1 -125190 sc-eQTL 5.40e-01 0.0548 0.0893 0.87 CD4_TCM L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 5.69e-01 0.0423 0.0741 0.87 CD4_TCM L2
ENSG00000162517 PEF1 -704095 sc-eQTL 7.20e-01 0.0357 0.0994 0.87 CD4_TCM L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 9.42e-02 0.157 0.0935 0.87 CD4_TCM L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 1.58e-01 -0.148 0.104 0.87 CD4_TCM L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 8.82e-01 0.0184 0.124 0.87 CD4_TEM L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 5.19e-01 0.0762 0.118 0.87 CD4_TEM L2
ENSG00000134644 PUM1 -125190 sc-eQTL 9.46e-01 0.00667 0.0984 0.87 CD4_TEM L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 8.17e-01 0.0231 0.0995 0.87 CD4_TEM L2
ENSG00000162517 PEF1 -704095 sc-eQTL 9.21e-02 0.187 0.111 0.87 CD4_TEM L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 5.57e-01 -0.0685 0.116 0.87 CD4_TEM L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 7.45e-01 0.0373 0.115 0.87 CD4_TEM L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 2.50e-01 -0.164 0.142 0.87 CD8_CTL L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 8.59e-01 -0.0195 0.109 0.87 CD8_CTL L2
ENSG00000134644 PUM1 -125190 sc-eQTL 8.78e-02 0.18 0.105 0.87 CD8_CTL L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 2.86e-01 0.125 0.117 0.87 CD8_CTL L2
ENSG00000162517 PEF1 -704095 sc-eQTL 8.54e-01 0.0188 0.102 0.87 CD8_CTL L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 3.16e-01 0.124 0.123 0.87 CD8_CTL L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 9.95e-01 0.000772 0.116 0.87 CD8_CTL L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 6.13e-01 0.0624 0.123 0.87 CD8_Naive L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 4.61e-01 0.0784 0.106 0.87 CD8_Naive L2
ENSG00000134644 PUM1 -125190 sc-eQTL 1.60e-01 0.12 0.0851 0.87 CD8_Naive L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 9.55e-01 0.00466 0.082 0.87 CD8_Naive L2
ENSG00000162517 PEF1 -704095 sc-eQTL 4.32e-01 -0.0895 0.114 0.87 CD8_Naive L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 2.88e-01 -0.109 0.102 0.87 CD8_Naive L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 7.62e-01 -0.0337 0.111 0.87 CD8_Naive L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 9.83e-01 -0.0029 0.136 0.863 CD8_TCM L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 7.02e-01 0.0479 0.125 0.863 CD8_TCM L2
ENSG00000134644 PUM1 -125190 sc-eQTL 1.59e-01 0.165 0.117 0.863 CD8_TCM L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 4.79e-01 0.087 0.123 0.863 CD8_TCM L2
ENSG00000162517 PEF1 -704095 sc-eQTL 5.63e-01 -0.0727 0.125 0.863 CD8_TCM L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 9.15e-01 -0.0122 0.114 0.863 CD8_TCM L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 3.84e-02 0.237 0.114 0.863 CD8_TCM L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 9.04e-01 -0.0162 0.134 0.872 CD8_TEM L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 7.00e-02 -0.232 0.128 0.872 CD8_TEM L2
ENSG00000134644 PUM1 -125190 sc-eQTL 6.70e-01 -0.0561 0.131 0.872 CD8_TEM L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 3.10e-01 -0.125 0.123 0.872 CD8_TEM L2
ENSG00000162517 PEF1 -704095 sc-eQTL 4.49e-01 -0.0882 0.116 0.872 CD8_TEM L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 5.66e-01 0.0736 0.128 0.872 CD8_TEM L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 4.59e-01 -0.0861 0.116 0.872 CD8_TEM L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 5.43e-02 -0.254 0.131 0.868 MAIT L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 7.84e-01 -0.0321 0.117 0.868 MAIT L2
ENSG00000134644 PUM1 -125190 sc-eQTL 1.52e-01 0.161 0.112 0.868 MAIT L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 7.10e-01 -0.0395 0.106 0.868 MAIT L2
ENSG00000162517 PEF1 -704095 sc-eQTL 7.42e-01 -0.0384 0.116 0.868 MAIT L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 2.37e-01 0.139 0.118 0.868 MAIT L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 6.89e-01 0.0488 0.122 0.868 MAIT L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 7.12e-01 -0.0501 0.135 0.871 NK_CD56bright L2
ENSG00000121753 ADGRB2 -824092 sc-eQTL 1.27e-01 -0.162 0.105 0.871 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 4.75e-01 -0.0819 0.114 0.871 NK_CD56bright L2
ENSG00000134644 PUM1 -125190 sc-eQTL 2.16e-01 -0.149 0.12 0.871 NK_CD56bright L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 9.21e-01 -0.0118 0.119 0.871 NK_CD56bright L2
ENSG00000162517 PEF1 -704095 sc-eQTL 8.93e-01 0.0155 0.115 0.871 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 1.56e-01 0.169 0.119 0.871 NK_CD56bright L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 7.52e-01 -0.0372 0.117 0.871 NK_CD56bright L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 2.33e-01 -0.152 0.127 0.869 NK_CD56dim L2
ENSG00000121753 ADGRB2 -824092 sc-eQTL 5.20e-01 0.0724 0.112 0.869 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 5.11e-01 0.0621 0.0944 0.869 NK_CD56dim L2
ENSG00000134644 PUM1 -125190 sc-eQTL 8.32e-01 0.0205 0.0969 0.869 NK_CD56dim L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 1.25e-01 0.158 0.103 0.869 NK_CD56dim L2
ENSG00000162517 PEF1 -704095 sc-eQTL 8.02e-01 -0.023 0.092 0.869 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 9.24e-01 -0.0123 0.129 0.869 NK_CD56dim L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 9.91e-02 -0.176 0.106 0.869 NK_CD56dim L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 2.97e-01 -0.146 0.139 0.874 NK_HLA L2
ENSG00000121753 ADGRB2 -824092 sc-eQTL 7.65e-01 0.0332 0.111 0.874 NK_HLA L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 7.83e-01 -0.0343 0.125 0.874 NK_HLA L2
ENSG00000134644 PUM1 -125190 sc-eQTL 7.11e-01 -0.0451 0.121 0.874 NK_HLA L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 2.63e-01 0.13 0.116 0.874 NK_HLA L2
ENSG00000162517 PEF1 -704095 sc-eQTL 5.76e-01 0.0732 0.13 0.874 NK_HLA L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 6.61e-01 0.0541 0.123 0.874 NK_HLA L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 5.55e-01 0.0705 0.119 0.874 NK_HLA L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 6.20e-01 -0.062 0.125 0.869 NK_cytokine L2
ENSG00000121753 ADGRB2 -824092 sc-eQTL 8.93e-01 0.0153 0.113 0.869 NK_cytokine L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 7.94e-01 0.0255 0.0975 0.869 NK_cytokine L2
ENSG00000134644 PUM1 -125190 sc-eQTL 2.92e-01 0.111 0.105 0.869 NK_cytokine L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 4.83e-01 0.0814 0.116 0.869 NK_cytokine L2
ENSG00000162517 PEF1 -704095 sc-eQTL 3.88e-01 0.0854 0.0987 0.869 NK_cytokine L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 5.82e-01 0.0678 0.123 0.869 NK_cytokine L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 7.88e-01 0.0307 0.114 0.869 NK_cytokine L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 2.66e-01 -0.159 0.143 0.87 PB L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 7.39e-01 -0.0555 0.166 0.87 PB L2
ENSG00000134644 PUM1 -125190 sc-eQTL 8.66e-01 0.0244 0.144 0.87 PB L2
ENSG00000162510 MATN1 217216 sc-eQTL 3.95e-01 -0.115 0.134 0.87 PB L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 2.96e-01 0.1 0.0957 0.87 PB L2
ENSG00000162517 PEF1 -704095 sc-eQTL 1.13e-01 -0.234 0.146 0.87 PB L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 3.09e-01 -0.134 0.131 0.87 PB L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 6.03e-01 0.0731 0.14 0.87 PB L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 6.24e-01 0.0482 0.0982 0.87 Pro_T L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 5.06e-01 0.083 0.125 0.87 Pro_T L2
ENSG00000134644 PUM1 -125190 sc-eQTL 2.80e-01 0.126 0.116 0.87 Pro_T L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 1.04e-01 -0.135 0.083 0.87 Pro_T L2
ENSG00000162517 PEF1 -704095 sc-eQTL 6.72e-02 -0.224 0.122 0.87 Pro_T L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 7.24e-01 -0.0413 0.117 0.87 Pro_T L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 4.98e-01 -0.0727 0.107 0.87 Pro_T L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 6.62e-01 0.0561 0.128 0.87 Treg L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 5.18e-01 0.0803 0.124 0.87 Treg L2
ENSG00000134644 PUM1 -125190 sc-eQTL 6.49e-01 0.0453 0.0992 0.87 Treg L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 8.26e-01 -0.025 0.114 0.87 Treg L2
ENSG00000162517 PEF1 -704095 sc-eQTL 2.05e-01 -0.156 0.122 0.87 Treg L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 8.23e-01 0.026 0.116 0.87 Treg L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 5.73e-01 -0.0653 0.116 0.87 Treg L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 6.16e-01 0.0658 0.131 0.873 cDC L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 4.90e-01 -0.0979 0.142 0.873 cDC L2
ENSG00000134644 PUM1 -125190 sc-eQTL 7.95e-01 0.0317 0.122 0.873 cDC L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 4.82e-01 -0.0601 0.0852 0.873 cDC L2
ENSG00000162517 PEF1 -704095 sc-eQTL 4.52e-01 0.0929 0.123 0.873 cDC L2
ENSG00000168528 SERINC2 -468764 sc-eQTL 2.60e-01 0.123 0.109 0.873 cDC L2
ENSG00000284543 LINC01226 -565425 sc-eQTL 2.21e-01 -0.132 0.107 0.873 cDC L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 8.63e-01 0.02 0.116 0.873 cDC L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 1.50e-01 -0.15 0.103 0.87 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 4.95e-01 0.0792 0.116 0.87 cMono_IL1B L2
ENSG00000134644 PUM1 -125190 sc-eQTL 4.50e-01 -0.0593 0.0784 0.87 cMono_IL1B L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 5.37e-01 0.0426 0.0688 0.87 cMono_IL1B L2
ENSG00000162512 SDC3 32043 sc-eQTL 9.13e-02 -0.219 0.129 0.87 cMono_IL1B L2
ENSG00000162517 PEF1 -704095 sc-eQTL 9.22e-01 -0.0104 0.106 0.87 cMono_IL1B L2
ENSG00000168528 SERINC2 -468764 sc-eQTL 9.94e-01 0.000953 0.131 0.87 cMono_IL1B L2
ENSG00000284543 LINC01226 -565425 sc-eQTL 7.42e-01 -0.0383 0.116 0.87 cMono_IL1B L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 6.52e-01 0.0488 0.108 0.87 cMono_IL1B L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 3.35e-01 0.105 0.108 0.87 cMono_S100A L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 8.99e-01 -0.0163 0.128 0.87 cMono_S100A L2
ENSG00000134644 PUM1 -125190 sc-eQTL 8.33e-01 0.0196 0.0927 0.87 cMono_S100A L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 5.88e-01 0.0386 0.0712 0.87 cMono_S100A L2
ENSG00000162512 SDC3 32043 sc-eQTL 3.94e-02 -0.253 0.122 0.87 cMono_S100A L2
ENSG00000162517 PEF1 -704095 sc-eQTL 4.98e-01 -0.0754 0.111 0.87 cMono_S100A L2
ENSG00000168528 SERINC2 -468764 sc-eQTL 7.12e-01 -0.0482 0.13 0.87 cMono_S100A L2
ENSG00000284543 LINC01226 -565425 sc-eQTL 1.16e-01 -0.166 0.105 0.87 cMono_S100A L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 8.67e-01 -0.0178 0.106 0.87 cMono_S100A L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 6.36e-01 -0.0741 0.156 0.861 gdT L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 7.57e-01 -0.0416 0.134 0.861 gdT L2
ENSG00000134644 PUM1 -125190 sc-eQTL 2.18e-01 -0.17 0.138 0.861 gdT L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 8.36e-01 0.0313 0.15 0.861 gdT L2
ENSG00000162517 PEF1 -704095 sc-eQTL 5.59e-02 0.262 0.136 0.861 gdT L2
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 9.99e-01 -0.00024 0.139 0.861 gdT L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 6.01e-01 0.0703 0.134 0.861 gdT L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 7.99e-01 0.0306 0.12 0.873 intMono L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 1.32e-01 -0.195 0.129 0.873 intMono L2
ENSG00000134644 PUM1 -125190 sc-eQTL 5.89e-01 -0.0593 0.11 0.873 intMono L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 1.34e-01 0.129 0.0856 0.873 intMono L2
ENSG00000162512 SDC3 32043 sc-eQTL 5.63e-02 -0.224 0.117 0.873 intMono L2
ENSG00000162517 PEF1 -704095 sc-eQTL 8.05e-01 0.0306 0.124 0.873 intMono L2
ENSG00000168528 SERINC2 -468764 sc-eQTL 9.07e-01 -0.0144 0.123 0.873 intMono L2
ENSG00000284543 LINC01226 -565425 sc-eQTL 9.78e-01 -0.00326 0.117 0.873 intMono L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 9.04e-01 0.0141 0.117 0.873 intMono L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 1.00e+00 2.24e-05 0.112 0.871 ncMono L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 5.60e-01 -0.0697 0.119 0.871 ncMono L2
ENSG00000134644 PUM1 -125190 sc-eQTL 1.78e-01 -0.131 0.0971 0.871 ncMono L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 5.70e-01 0.0504 0.0885 0.871 ncMono L2
ENSG00000162512 SDC3 32043 sc-eQTL 4.21e-02 -0.201 0.0983 0.871 ncMono L2
ENSG00000162517 PEF1 -704095 sc-eQTL 8.81e-01 -0.0171 0.114 0.871 ncMono L2
ENSG00000168528 SERINC2 -468764 sc-eQTL 9.85e-01 -0.00201 0.108 0.871 ncMono L2
ENSG00000284543 LINC01226 -565425 sc-eQTL 7.28e-01 0.0378 0.108 0.871 ncMono L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 4.61e-01 -0.0829 0.112 0.871 ncMono L2
ENSG00000060688 SNRNP40 -355987 sc-eQTL 3.20e-01 -0.131 0.131 0.862 pDC L2
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 9.61e-01 0.0071 0.144 0.862 pDC L2
ENSG00000134644 PUM1 -125190 sc-eQTL 7.10e-01 0.0445 0.12 0.862 pDC L2
ENSG00000162511 LAPTM5 183027 sc-eQTL 1.07e-01 0.179 0.11 0.862 pDC L2
ENSG00000162517 PEF1 -704095 sc-eQTL 6.00e-01 0.0758 0.144 0.862 pDC L2
ENSG00000168528 SERINC2 -468764 sc-eQTL 1.84e-01 0.179 0.134 0.862 pDC L2
ENSG00000284543 LINC01226 -565425 sc-eQTL 1.56e-01 0.148 0.104 0.862 pDC L2
ENSG00000287510 AL137857.1 209108 sc-eQTL 7.27e-01 0.0431 0.123 0.862 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -355987 sc-eQTL 4.20e-01 -0.107 0.132 0.87 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 4.30e-01 -0.087 0.11 0.87 B_Memory LOneK1K
ENSG00000134644 PUM1 -125190 sc-eQTL 2.55e-01 -0.111 0.0973 0.87 B_Memory LOneK1K
ENSG00000162510 MATN1 217216 sc-eQTL 6.21e-01 0.0551 0.111 0.87 B_Memory LOneK1K
ENSG00000162511 LAPTM5 183027 sc-eQTL 9.37e-01 0.00554 0.0699 0.87 B_Memory LOneK1K
ENSG00000162517 PEF1 -704095 sc-eQTL 4.14e-01 -0.0946 0.116 0.87 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 4.59e-02 -0.184 0.0916 0.87 B_Memory LOneK1K
ENSG00000287510 AL137857.1 209108 sc-eQTL 7.81e-02 -0.177 0.1 0.87 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -355987 sc-eQTL 7.45e-01 -0.0384 0.118 0.87 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 4.03e-01 -0.0781 0.0932 0.87 B_Naive LOneK1K
ENSG00000134644 PUM1 -125190 sc-eQTL 9.13e-01 -0.00969 0.0883 0.87 B_Naive LOneK1K
ENSG00000162510 MATN1 217216 sc-eQTL 8.25e-01 0.0188 0.085 0.87 B_Naive LOneK1K
ENSG00000162511 LAPTM5 183027 sc-eQTL 9.76e-01 -0.0018 0.0598 0.87 B_Naive LOneK1K
ENSG00000162517 PEF1 -704095 sc-eQTL 3.88e-01 0.0943 0.109 0.87 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 3.34e-01 0.0746 0.0771 0.87 B_Naive LOneK1K
ENSG00000287510 AL137857.1 209108 sc-eQTL 9.97e-01 -0.000322 0.0918 0.87 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -355987 sc-eQTL 8.80e-01 -0.015 0.0988 0.87 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 5.67e-01 0.0642 0.112 0.87 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -125190 sc-eQTL 7.04e-01 -0.0272 0.0714 0.87 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 183027 sc-eQTL 6.15e-01 0.0316 0.0627 0.87 CD14_Mono LOneK1K
ENSG00000162512 SDC3 32043 sc-eQTL 1.53e-02 -0.309 0.126 0.87 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -704095 sc-eQTL 8.27e-01 -0.0197 0.09 0.87 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -468764 sc-eQTL 8.81e-01 -0.0197 0.132 0.87 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -565425 sc-eQTL 6.03e-01 -0.0562 0.108 0.87 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 209108 sc-eQTL 8.31e-01 0.0216 0.101 0.87 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -355987 sc-eQTL 4.96e-01 0.0727 0.107 0.869 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 1.33e-01 -0.175 0.116 0.869 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -125190 sc-eQTL 7.40e-02 -0.17 0.0949 0.869 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 183027 sc-eQTL 4.36e-01 0.0595 0.0764 0.869 CD16_Mono LOneK1K
ENSG00000162512 SDC3 32043 sc-eQTL 1.37e-02 -0.274 0.11 0.869 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -704095 sc-eQTL 7.60e-01 0.031 0.101 0.869 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -468764 sc-eQTL 6.66e-01 0.05 0.116 0.869 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -565425 sc-eQTL 7.72e-01 0.0319 0.11 0.869 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 209108 sc-eQTL 4.64e-01 -0.0806 0.11 0.869 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -355987 sc-eQTL 1.16e-01 -0.19 0.12 0.869 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -824092 sc-eQTL 4.05e-01 0.0859 0.103 0.869 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -356181 sc-eQTL 6.00e-01 0.0434 0.0827 0.869 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -125190 sc-eQTL 3.47e-01 0.0852 0.0904 0.869 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 183027 sc-eQTL 6.56e-02 0.186 0.1 0.869 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -704095 sc-eQTL 8.98e-01 0.00983 0.0769 0.869 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 222297 sc-eQTL 4.31e-01 0.092 0.117 0.869 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 209108 sc-eQTL 3.32e-01 -0.0979 0.101 0.869 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -355987 eQTL 0.00726 0.066 0.0245 0.00121 0.0 0.127
ENSG00000121766 ZCCHC17 -356181 eQTL 3.65e-04 0.092 0.0257 0.0 0.0 0.127
ENSG00000162512 SDC3 32043 eQTL 1.34e-11 -0.24 0.035 0.00155 0.00771 0.127
ENSG00000168528 SERINC2 -468764 eQTL 0.0037 -0.163 0.056 0.0 0.0 0.127
ENSG00000237329 AL356320.2 -95933 eQTL 0.0104 0.13 0.0507 0.00144 0.0 0.127

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -356181 1.96e-06 9.1e-06 3.49e-07 2.24e-06 4.27e-07 7.77e-07 1.33e-06 4.01e-07 2.07e-06 7.04e-07 3.01e-06 1.74e-06 3.49e-06 1.71e-06 9.35e-07 9.54e-07 1.15e-06 1.46e-06 7.08e-07 5.11e-07 7.6e-07 2.17e-06 1.09e-06 5.59e-07 2.32e-06 7.37e-07 9.89e-07 9.6e-07 1.6e-06 1.2e-06 1.96e-06 3.34e-08 5.68e-08 1.12e-06 1.27e-06 4.8e-07 5.76e-07 1.59e-07 5.35e-07 2.93e-07 4.07e-08 2.75e-06 3.32e-07 2.09e-08 1.93e-07 1.26e-07 1.71e-07 5.86e-08 6.12e-08
ENSG00000162512 SDC3 32043 3.49e-05 3.47e-05 2.57e-06 1.27e-05 2.48e-06 7.78e-06 2.8e-05 2.48e-06 2.07e-05 9.54e-06 2.41e-05 8.71e-06 3.63e-05 9.56e-06 5.36e-06 1.01e-05 9.24e-06 1.62e-05 4.2e-06 3.59e-06 8.02e-06 2.15e-05 1.74e-05 4.85e-06 2.96e-05 5.29e-06 8e-06 8.11e-06 1.75e-05 1.38e-05 1.31e-05 9.57e-07 1.43e-06 3.78e-06 6.68e-06 2.88e-06 1.76e-06 2.2e-06 3.15e-06 2.3e-06 1.03e-06 2.9e-05 2.43e-06 1.61e-07 9.84e-07 2.34e-06 1.98e-06 7e-07 4.56e-07
ENSG00000237329 AL356320.2 -95933 1.21e-05 3.73e-05 6.31e-07 8.31e-06 1.94e-06 4.24e-06 1.24e-05 1.36e-06 1.18e-05 5.08e-06 1.58e-05 6.49e-06 2.06e-05 7.1e-06 4.1e-06 6.06e-06 5.49e-06 7.72e-06 2.58e-06 2.16e-06 4.51e-06 1.08e-05 6.96e-06 2.64e-06 1.37e-05 2.57e-06 4.45e-06 3.3e-06 8.29e-06 7.66e-06 8.36e-06 5.4e-07 6.52e-07 2.75e-06 4.56e-06 1.39e-06 1.1e-06 4.4e-07 1.57e-06 1.03e-06 1.98e-07 1.29e-05 1.26e-06 1.99e-07 6.1e-07 1.08e-06 1.14e-06 4.43e-07 3.41e-07