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Genes within 1Mb (chr1:30925495:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -371293 sc-eQTL 5.36e-01 -0.0668 0.108 0.861 B L1
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 6.01e-02 -0.162 0.0857 0.861 B L1
ENSG00000134644 PUM1 -140496 sc-eQTL 8.75e-01 0.0115 0.0725 0.861 B L1
ENSG00000162510 MATN1 201910 sc-eQTL 2.35e-01 0.0905 0.076 0.861 B L1
ENSG00000162511 LAPTM5 167721 sc-eQTL 3.59e-01 0.0548 0.0596 0.861 B L1
ENSG00000162517 PEF1 -719401 sc-eQTL 6.49e-01 -0.0411 0.09 0.861 B L1
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 4.33e-01 0.0549 0.0698 0.861 B L1
ENSG00000287510 AL137857.1 193802 sc-eQTL 2.85e-01 -0.0884 0.0826 0.861 B L1
ENSG00000060688 SNRNP40 -371293 sc-eQTL 8.82e-01 -0.0136 0.0919 0.861 CD4T L1
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 3.11e-01 0.0726 0.0716 0.861 CD4T L1
ENSG00000134644 PUM1 -140496 sc-eQTL 4.55e-02 0.127 0.0633 0.861 CD4T L1
ENSG00000162511 LAPTM5 167721 sc-eQTL 6.20e-01 -0.0351 0.0708 0.861 CD4T L1
ENSG00000162517 PEF1 -719401 sc-eQTL 6.32e-01 -0.0355 0.074 0.861 CD4T L1
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 6.12e-01 -0.0322 0.0633 0.861 CD4T L1
ENSG00000287510 AL137857.1 193802 sc-eQTL 2.01e-01 -0.0969 0.0756 0.861 CD4T L1
ENSG00000060688 SNRNP40 -371293 sc-eQTL 6.37e-01 -0.0574 0.121 0.861 CD8T L1
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 5.18e-01 0.0522 0.0807 0.861 CD8T L1
ENSG00000134644 PUM1 -140496 sc-eQTL 8.17e-02 0.123 0.0706 0.861 CD8T L1
ENSG00000162511 LAPTM5 167721 sc-eQTL 7.16e-01 0.0251 0.069 0.861 CD8T L1
ENSG00000162517 PEF1 -719401 sc-eQTL 8.14e-01 -0.02 0.085 0.861 CD8T L1
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 7.07e-01 0.0305 0.0809 0.861 CD8T L1
ENSG00000287510 AL137857.1 193802 sc-eQTL 5.30e-01 -0.0638 0.102 0.861 CD8T L1
ENSG00000060688 SNRNP40 -371293 sc-eQTL 7.72e-01 -0.031 0.107 0.856 DC L1
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 7.36e-01 -0.0426 0.126 0.856 DC L1
ENSG00000134644 PUM1 -140496 sc-eQTL 3.35e-01 -0.0956 0.0989 0.856 DC L1
ENSG00000162511 LAPTM5 167721 sc-eQTL 7.97e-01 -0.0182 0.0708 0.856 DC L1
ENSG00000162517 PEF1 -719401 sc-eQTL 8.40e-01 0.0232 0.115 0.856 DC L1
ENSG00000168528 SERINC2 -484070 sc-eQTL 3.28e-01 0.114 0.116 0.856 DC L1
ENSG00000284543 LINC01226 -580731 sc-eQTL 7.58e-01 0.0239 0.0773 0.856 DC L1
ENSG00000287510 AL137857.1 193802 sc-eQTL 6.45e-01 0.0516 0.112 0.856 DC L1
ENSG00000060688 SNRNP40 -371293 sc-eQTL 5.25e-01 0.0528 0.0829 0.861 Mono L1
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 9.40e-01 0.00769 0.103 0.861 Mono L1
ENSG00000134644 PUM1 -140496 sc-eQTL 3.17e-01 -0.066 0.0658 0.861 Mono L1
ENSG00000162511 LAPTM5 167721 sc-eQTL 8.97e-01 0.00787 0.0606 0.861 Mono L1
ENSG00000162512 SDC3 16737 sc-eQTL 2.82e-03 -0.345 0.114 0.861 Mono L1
ENSG00000162517 PEF1 -719401 sc-eQTL 8.24e-01 0.0182 0.0817 0.861 Mono L1
ENSG00000168528 SERINC2 -484070 sc-eQTL 7.57e-01 -0.0387 0.125 0.861 Mono L1
ENSG00000284543 LINC01226 -580731 sc-eQTL 2.23e-01 -0.134 0.11 0.861 Mono L1
ENSG00000287510 AL137857.1 193802 sc-eQTL 8.51e-01 -0.0181 0.0963 0.861 Mono L1
ENSG00000060688 SNRNP40 -371293 sc-eQTL 1.12e-01 -0.184 0.115 0.861 NK L1
ENSG00000121753 ADGRB2 -839398 sc-eQTL 5.25e-01 0.0636 0.0999 0.861 NK L1
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 5.35e-01 0.0493 0.0794 0.861 NK L1
ENSG00000134644 PUM1 -140496 sc-eQTL 3.54e-01 0.0773 0.0832 0.861 NK L1
ENSG00000162511 LAPTM5 167721 sc-eQTL 2.47e-02 0.214 0.0948 0.861 NK L1
ENSG00000162517 PEF1 -719401 sc-eQTL 8.76e-01 0.011 0.07 0.861 NK L1
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 6.40e-01 0.0505 0.108 0.861 NK L1
ENSG00000287510 AL137857.1 193802 sc-eQTL 2.07e-01 -0.126 0.0992 0.861 NK L1
ENSG00000060688 SNRNP40 -371293 sc-eQTL 5.31e-01 -0.055 0.0876 0.861 Other_T L1
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 9.66e-01 0.00405 0.0937 0.861 Other_T L1
ENSG00000134644 PUM1 -140496 sc-eQTL 1.96e-01 0.109 0.0839 0.861 Other_T L1
ENSG00000162511 LAPTM5 167721 sc-eQTL 9.96e-01 -0.000335 0.0691 0.861 Other_T L1
ENSG00000162517 PEF1 -719401 sc-eQTL 1.92e-01 0.12 0.0919 0.861 Other_T L1
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 9.11e-01 0.0126 0.113 0.861 Other_T L1
ENSG00000287510 AL137857.1 193802 sc-eQTL 6.71e-01 -0.0501 0.118 0.861 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -371293 sc-eQTL 7.00e-01 -0.0558 0.144 0.865 B_Activated L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 6.82e-01 -0.0597 0.146 0.865 B_Activated L2
ENSG00000134644 PUM1 -140496 sc-eQTL 7.24e-01 -0.0479 0.135 0.865 B_Activated L2
ENSG00000162510 MATN1 201910 sc-eQTL 3.35e-01 -0.114 0.118 0.865 B_Activated L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 3.10e-01 -0.0838 0.0823 0.865 B_Activated L2
ENSG00000162517 PEF1 -719401 sc-eQTL 8.32e-01 -0.0299 0.14 0.865 B_Activated L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 1.09e-03 -0.429 0.129 0.865 B_Activated L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 1.96e-01 -0.152 0.117 0.865 B_Activated L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 1.50e-01 -0.188 0.13 0.861 B_Intermediate L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 9.02e-01 -0.0135 0.109 0.861 B_Intermediate L2
ENSG00000134644 PUM1 -140496 sc-eQTL 2.14e-01 -0.128 0.103 0.861 B_Intermediate L2
ENSG00000162510 MATN1 201910 sc-eQTL 5.06e-01 -0.0713 0.107 0.861 B_Intermediate L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 7.09e-01 0.0246 0.0658 0.861 B_Intermediate L2
ENSG00000162517 PEF1 -719401 sc-eQTL 1.17e-01 -0.191 0.121 0.861 B_Intermediate L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 5.19e-01 0.0596 0.0922 0.861 B_Intermediate L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 3.41e-01 -0.0984 0.103 0.861 B_Intermediate L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 3.36e-01 0.121 0.126 0.86 B_Memory L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 5.24e-01 -0.074 0.116 0.86 B_Memory L2
ENSG00000134644 PUM1 -140496 sc-eQTL 9.26e-01 0.0094 0.101 0.86 B_Memory L2
ENSG00000162510 MATN1 201910 sc-eQTL 5.33e-01 0.0603 0.0966 0.86 B_Memory L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 2.71e-01 0.0943 0.0854 0.86 B_Memory L2
ENSG00000162517 PEF1 -719401 sc-eQTL 6.06e-01 -0.0591 0.114 0.86 B_Memory L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 3.26e-03 -0.286 0.096 0.86 B_Memory L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 6.33e-01 0.0549 0.115 0.86 B_Memory L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 2.88e-01 -0.124 0.117 0.861 B_Naive1 L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 5.50e-01 -0.0605 0.101 0.861 B_Naive1 L2
ENSG00000134644 PUM1 -140496 sc-eQTL 9.88e-01 -0.00137 0.0892 0.861 B_Naive1 L2
ENSG00000162510 MATN1 201910 sc-eQTL 3.14e-01 0.0911 0.0903 0.861 B_Naive1 L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 8.18e-01 0.0139 0.0604 0.861 B_Naive1 L2
ENSG00000162517 PEF1 -719401 sc-eQTL 2.23e-01 0.13 0.106 0.861 B_Naive1 L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 2.22e-01 0.0969 0.0791 0.861 B_Naive1 L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 5.86e-01 -0.0534 0.098 0.861 B_Naive1 L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 8.32e-01 0.0266 0.125 0.861 B_Naive2 L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 2.83e-01 -0.111 0.103 0.861 B_Naive2 L2
ENSG00000134644 PUM1 -140496 sc-eQTL 3.85e-01 0.0879 0.101 0.861 B_Naive2 L2
ENSG00000162510 MATN1 201910 sc-eQTL 1.18e-01 -0.151 0.0966 0.861 B_Naive2 L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 4.71e-01 -0.0476 0.0659 0.861 B_Naive2 L2
ENSG00000162517 PEF1 -719401 sc-eQTL 7.69e-01 -0.0352 0.12 0.861 B_Naive2 L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 8.65e-01 -0.0164 0.096 0.861 B_Naive2 L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 4.52e-01 -0.0781 0.104 0.861 B_Naive2 L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 9.26e-01 0.0118 0.126 0.859 CD4_CTL L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 2.24e-01 0.15 0.123 0.859 CD4_CTL L2
ENSG00000134644 PUM1 -140496 sc-eQTL 6.51e-01 0.0549 0.121 0.859 CD4_CTL L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 7.37e-01 -0.0363 0.108 0.859 CD4_CTL L2
ENSG00000162517 PEF1 -719401 sc-eQTL 7.44e-01 -0.0362 0.111 0.859 CD4_CTL L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 6.19e-01 0.0588 0.118 0.859 CD4_CTL L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 8.17e-01 -0.0242 0.104 0.859 CD4_CTL L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 4.76e-01 -0.0688 0.0965 0.861 CD4_Naive L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 2.61e-01 0.0963 0.0854 0.861 CD4_Naive L2
ENSG00000134644 PUM1 -140496 sc-eQTL 2.63e-02 0.151 0.0676 0.861 CD4_Naive L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 3.06e-01 -0.075 0.0731 0.861 CD4_Naive L2
ENSG00000162517 PEF1 -719401 sc-eQTL 2.83e-01 -0.0863 0.0801 0.861 CD4_Naive L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 4.15e-01 -0.0606 0.0743 0.861 CD4_Naive L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 3.71e-01 -0.0764 0.0853 0.861 CD4_Naive L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 2.97e-01 0.126 0.121 0.861 CD4_TCM L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 1.95e-01 0.126 0.097 0.861 CD4_TCM L2
ENSG00000134644 PUM1 -140496 sc-eQTL 5.80e-01 0.0477 0.0862 0.861 CD4_TCM L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 6.03e-01 0.0373 0.0715 0.861 CD4_TCM L2
ENSG00000162517 PEF1 -719401 sc-eQTL 6.53e-01 0.0431 0.0958 0.861 CD4_TCM L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 1.02e-01 0.148 0.0902 0.861 CD4_TCM L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 1.02e-01 -0.165 0.1 0.861 CD4_TCM L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 9.30e-01 0.0105 0.12 0.861 CD4_TEM L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 4.55e-01 0.0852 0.114 0.861 CD4_TEM L2
ENSG00000134644 PUM1 -140496 sc-eQTL 8.38e-01 -0.0195 0.095 0.861 CD4_TEM L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 7.45e-01 0.0312 0.0961 0.861 CD4_TEM L2
ENSG00000162517 PEF1 -719401 sc-eQTL 5.62e-02 0.205 0.107 0.861 CD4_TEM L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 3.89e-01 -0.0969 0.112 0.861 CD4_TEM L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 6.55e-01 0.0495 0.111 0.861 CD4_TEM L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 2.89e-01 -0.144 0.136 0.861 CD8_CTL L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 7.65e-01 0.0313 0.105 0.861 CD8_CTL L2
ENSG00000134644 PUM1 -140496 sc-eQTL 7.34e-02 0.181 0.101 0.861 CD8_CTL L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 3.64e-01 0.102 0.112 0.861 CD8_CTL L2
ENSG00000162517 PEF1 -719401 sc-eQTL 9.47e-01 0.00652 0.0979 0.861 CD8_CTL L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 3.59e-01 0.108 0.118 0.861 CD8_CTL L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 7.21e-01 -0.0397 0.111 0.861 CD8_CTL L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 4.51e-01 0.0896 0.119 0.861 CD8_Naive L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 3.93e-01 0.0876 0.102 0.861 CD8_Naive L2
ENSG00000134644 PUM1 -140496 sc-eQTL 1.40e-01 0.121 0.082 0.861 CD8_Naive L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 9.62e-01 -0.00381 0.079 0.861 CD8_Naive L2
ENSG00000162517 PEF1 -719401 sc-eQTL 4.20e-01 -0.0885 0.11 0.861 CD8_Naive L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 3.57e-01 -0.0908 0.0984 0.861 CD8_Naive L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 7.69e-01 -0.0316 0.107 0.861 CD8_Naive L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 8.70e-01 -0.0214 0.131 0.854 CD8_TCM L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 8.93e-01 0.0162 0.12 0.854 CD8_TCM L2
ENSG00000134644 PUM1 -140496 sc-eQTL 1.07e-01 0.181 0.112 0.854 CD8_TCM L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 6.21e-01 0.0584 0.118 0.854 CD8_TCM L2
ENSG00000162517 PEF1 -719401 sc-eQTL 6.52e-01 -0.0544 0.121 0.854 CD8_TCM L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 9.75e-01 0.00344 0.109 0.854 CD8_TCM L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 9.08e-02 0.186 0.11 0.854 CD8_TCM L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 9.27e-01 -0.012 0.131 0.863 CD8_TEM L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 7.28e-02 -0.225 0.125 0.863 CD8_TEM L2
ENSG00000134644 PUM1 -140496 sc-eQTL 5.10e-01 -0.0847 0.128 0.863 CD8_TEM L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 2.32e-01 -0.144 0.12 0.863 CD8_TEM L2
ENSG00000162517 PEF1 -719401 sc-eQTL 4.28e-01 -0.0902 0.114 0.863 CD8_TEM L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 6.70e-01 0.0535 0.125 0.863 CD8_TEM L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 3.35e-01 -0.109 0.113 0.863 CD8_TEM L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 6.17e-02 -0.237 0.126 0.859 MAIT L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 8.98e-01 0.0145 0.113 0.859 MAIT L2
ENSG00000134644 PUM1 -140496 sc-eQTL 1.49e-01 0.155 0.107 0.859 MAIT L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 7.37e-01 -0.0342 0.102 0.859 MAIT L2
ENSG00000162517 PEF1 -719401 sc-eQTL 5.34e-01 -0.0696 0.112 0.859 MAIT L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 4.90e-01 0.0783 0.113 0.859 MAIT L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 5.33e-01 0.073 0.117 0.859 MAIT L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 4.84e-01 -0.0914 0.13 0.862 NK_CD56bright L2
ENSG00000121753 ADGRB2 -839398 sc-eQTL 1.59e-01 -0.144 0.102 0.862 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 6.75e-01 -0.0463 0.11 0.862 NK_CD56bright L2
ENSG00000134644 PUM1 -140496 sc-eQTL 2.49e-01 -0.133 0.115 0.862 NK_CD56bright L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 5.90e-01 0.0616 0.114 0.862 NK_CD56bright L2
ENSG00000162517 PEF1 -719401 sc-eQTL 6.41e-01 0.0518 0.111 0.862 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 1.56e-01 0.163 0.114 0.862 NK_CD56bright L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 9.65e-01 0.00498 0.113 0.862 NK_CD56bright L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 4.40e-01 -0.0948 0.122 0.86 NK_CD56dim L2
ENSG00000121753 ADGRB2 -839398 sc-eQTL 6.33e-01 0.0516 0.108 0.86 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 3.67e-01 0.0819 0.0905 0.86 NK_CD56dim L2
ENSG00000134644 PUM1 -140496 sc-eQTL 5.61e-01 0.0541 0.093 0.86 NK_CD56dim L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 6.38e-02 0.183 0.0984 0.86 NK_CD56dim L2
ENSG00000162517 PEF1 -719401 sc-eQTL 7.64e-01 -0.0265 0.0883 0.86 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 6.60e-01 -0.0548 0.124 0.86 NK_CD56dim L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 2.84e-02 -0.224 0.101 0.86 NK_CD56dim L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 1.49e-01 -0.193 0.133 0.865 NK_HLA L2
ENSG00000121753 ADGRB2 -839398 sc-eQTL 7.63e-01 0.0322 0.106 0.865 NK_HLA L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 9.88e-01 0.00175 0.12 0.865 NK_HLA L2
ENSG00000134644 PUM1 -140496 sc-eQTL 8.79e-01 -0.0177 0.117 0.865 NK_HLA L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 3.38e-01 0.107 0.111 0.865 NK_HLA L2
ENSG00000162517 PEF1 -719401 sc-eQTL 7.22e-01 0.0447 0.125 0.865 NK_HLA L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 7.93e-01 0.0312 0.118 0.865 NK_HLA L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 6.06e-01 0.059 0.114 0.865 NK_HLA L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 5.50e-01 -0.0717 0.12 0.86 NK_cytokine L2
ENSG00000121753 ADGRB2 -839398 sc-eQTL 7.43e-01 0.0356 0.108 0.86 NK_cytokine L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 7.85e-01 0.0255 0.0936 0.86 NK_cytokine L2
ENSG00000134644 PUM1 -140496 sc-eQTL 2.62e-01 0.114 0.101 0.86 NK_cytokine L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 3.25e-01 0.11 0.111 0.86 NK_cytokine L2
ENSG00000162517 PEF1 -719401 sc-eQTL 3.45e-01 0.0897 0.0948 0.86 NK_cytokine L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 7.68e-01 0.0349 0.118 0.86 NK_cytokine L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 6.43e-01 0.051 0.11 0.86 NK_cytokine L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 3.07e-01 -0.145 0.141 0.867 PB L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 7.30e-01 -0.0571 0.165 0.867 PB L2
ENSG00000134644 PUM1 -140496 sc-eQTL 8.43e-01 0.0283 0.143 0.867 PB L2
ENSG00000162510 MATN1 201910 sc-eQTL 3.39e-01 -0.128 0.133 0.867 PB L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 3.87e-01 0.0826 0.095 0.867 PB L2
ENSG00000162517 PEF1 -719401 sc-eQTL 1.56e-01 -0.208 0.145 0.867 PB L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 2.75e-01 -0.142 0.13 0.867 PB L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 7.03e-01 0.053 0.139 0.867 PB L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 9.62e-01 0.00456 0.0949 0.861 Pro_T L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 6.32e-01 0.0577 0.12 0.861 Pro_T L2
ENSG00000134644 PUM1 -140496 sc-eQTL 3.55e-01 0.104 0.112 0.861 Pro_T L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 1.24e-01 -0.124 0.0801 0.861 Pro_T L2
ENSG00000162517 PEF1 -719401 sc-eQTL 6.60e-02 -0.217 0.117 0.861 Pro_T L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 4.81e-01 -0.0794 0.112 0.861 Pro_T L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 6.68e-01 -0.0444 0.104 0.861 Pro_T L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 7.13e-01 0.0454 0.123 0.861 Treg L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 7.08e-01 0.0448 0.119 0.861 Treg L2
ENSG00000134644 PUM1 -140496 sc-eQTL 7.44e-01 0.0313 0.0956 0.861 Treg L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 7.99e-01 -0.0279 0.109 0.861 Treg L2
ENSG00000162517 PEF1 -719401 sc-eQTL 1.27e-01 -0.18 0.118 0.861 Treg L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 7.64e-01 0.0336 0.112 0.861 Treg L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 6.12e-01 -0.0566 0.111 0.861 Treg L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 6.70e-01 0.0539 0.126 0.866 cDC L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 3.61e-01 -0.125 0.136 0.866 cDC L2
ENSG00000134644 PUM1 -140496 sc-eQTL 7.91e-01 0.0311 0.117 0.866 cDC L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 5.18e-01 -0.0533 0.0823 0.866 cDC L2
ENSG00000162517 PEF1 -719401 sc-eQTL 5.96e-01 0.0633 0.119 0.866 cDC L2
ENSG00000168528 SERINC2 -484070 sc-eQTL 5.69e-01 0.0602 0.106 0.866 cDC L2
ENSG00000284543 LINC01226 -580731 sc-eQTL 3.41e-01 -0.0989 0.104 0.866 cDC L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 8.71e-01 0.0182 0.112 0.866 cDC L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 2.56e-01 -0.114 0.1 0.861 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 4.33e-01 0.0877 0.112 0.861 cMono_IL1B L2
ENSG00000134644 PUM1 -140496 sc-eQTL 4.23e-01 -0.0607 0.0756 0.861 cMono_IL1B L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 6.77e-01 0.0277 0.0664 0.861 cMono_IL1B L2
ENSG00000162512 SDC3 16737 sc-eQTL 1.14e-01 -0.197 0.124 0.861 cMono_IL1B L2
ENSG00000162517 PEF1 -719401 sc-eQTL 8.55e-01 -0.0187 0.102 0.861 cMono_IL1B L2
ENSG00000168528 SERINC2 -484070 sc-eQTL 7.55e-01 -0.0396 0.127 0.861 cMono_IL1B L2
ENSG00000284543 LINC01226 -580731 sc-eQTL 5.63e-01 -0.0648 0.112 0.861 cMono_IL1B L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 7.77e-01 0.0296 0.104 0.861 cMono_IL1B L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 2.36e-01 0.124 0.105 0.861 cMono_S100A L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 8.82e-01 -0.0184 0.124 0.861 cMono_S100A L2
ENSG00000134644 PUM1 -140496 sc-eQTL 7.81e-01 0.0249 0.0896 0.861 cMono_S100A L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 6.53e-01 0.031 0.0689 0.861 cMono_S100A L2
ENSG00000162512 SDC3 16737 sc-eQTL 1.29e-01 -0.18 0.118 0.861 cMono_S100A L2
ENSG00000162517 PEF1 -719401 sc-eQTL 8.67e-01 -0.018 0.107 0.861 cMono_S100A L2
ENSG00000168528 SERINC2 -484070 sc-eQTL 5.02e-01 -0.0845 0.126 0.861 cMono_S100A L2
ENSG00000284543 LINC01226 -580731 sc-eQTL 6.89e-02 -0.186 0.102 0.861 cMono_S100A L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 9.09e-01 0.0118 0.103 0.861 cMono_S100A L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 6.90e-01 -0.0594 0.149 0.848 gdT L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 6.20e-01 -0.0636 0.128 0.848 gdT L2
ENSG00000134644 PUM1 -140496 sc-eQTL 3.11e-01 -0.134 0.131 0.848 gdT L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 8.84e-01 -0.0209 0.143 0.848 gdT L2
ENSG00000162517 PEF1 -719401 sc-eQTL 5.76e-02 0.248 0.129 0.848 gdT L2
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 9.76e-01 0.00399 0.132 0.848 gdT L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 8.68e-01 0.0213 0.128 0.848 gdT L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 6.55e-01 0.052 0.116 0.864 intMono L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 2.50e-01 -0.144 0.125 0.864 intMono L2
ENSG00000134644 PUM1 -140496 sc-eQTL 8.10e-01 -0.0255 0.106 0.864 intMono L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 1.89e-01 0.109 0.0829 0.864 intMono L2
ENSG00000162512 SDC3 16737 sc-eQTL 3.62e-02 -0.238 0.113 0.864 intMono L2
ENSG00000162517 PEF1 -719401 sc-eQTL 5.83e-01 0.0658 0.12 0.864 intMono L2
ENSG00000168528 SERINC2 -484070 sc-eQTL 7.30e-01 -0.0412 0.119 0.864 intMono L2
ENSG00000284543 LINC01226 -580731 sc-eQTL 7.25e-01 -0.0398 0.113 0.864 intMono L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 6.15e-01 -0.0569 0.113 0.864 intMono L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 7.84e-01 -0.0297 0.108 0.862 ncMono L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 8.65e-01 -0.0196 0.115 0.862 ncMono L2
ENSG00000134644 PUM1 -140496 sc-eQTL 9.76e-02 -0.156 0.0935 0.862 ncMono L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 5.84e-01 0.0468 0.0854 0.862 ncMono L2
ENSG00000162512 SDC3 16737 sc-eQTL 9.42e-02 -0.16 0.0952 0.862 ncMono L2
ENSG00000162517 PEF1 -719401 sc-eQTL 7.95e-01 -0.0286 0.11 0.862 ncMono L2
ENSG00000168528 SERINC2 -484070 sc-eQTL 6.87e-01 -0.0422 0.105 0.862 ncMono L2
ENSG00000284543 LINC01226 -580731 sc-eQTL 9.36e-01 0.00841 0.105 0.862 ncMono L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 4.22e-01 -0.0871 0.108 0.862 ncMono L2
ENSG00000060688 SNRNP40 -371293 sc-eQTL 4.61e-01 -0.0921 0.125 0.853 pDC L2
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 7.72e-01 0.0398 0.137 0.853 pDC L2
ENSG00000134644 PUM1 -140496 sc-eQTL 7.44e-01 0.0372 0.114 0.853 pDC L2
ENSG00000162511 LAPTM5 167721 sc-eQTL 2.36e-01 0.125 0.105 0.853 pDC L2
ENSG00000162517 PEF1 -719401 sc-eQTL 6.65e-01 0.0593 0.137 0.853 pDC L2
ENSG00000168528 SERINC2 -484070 sc-eQTL 4.17e-01 0.104 0.128 0.853 pDC L2
ENSG00000284543 LINC01226 -580731 sc-eQTL 1.67e-01 0.137 0.0988 0.853 pDC L2
ENSG00000287510 AL137857.1 193802 sc-eQTL 7.15e-01 0.0428 0.117 0.853 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -371293 sc-eQTL 4.00e-01 -0.107 0.127 0.861 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 3.99e-01 -0.0895 0.106 0.861 B_Memory LOneK1K
ENSG00000134644 PUM1 -140496 sc-eQTL 2.21e-01 -0.115 0.0938 0.861 B_Memory LOneK1K
ENSG00000162510 MATN1 201910 sc-eQTL 7.59e-01 0.033 0.107 0.861 B_Memory LOneK1K
ENSG00000162511 LAPTM5 167721 sc-eQTL 7.97e-01 0.0173 0.0674 0.861 B_Memory LOneK1K
ENSG00000162517 PEF1 -719401 sc-eQTL 4.01e-01 -0.0938 0.112 0.861 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 3.69e-02 -0.185 0.0883 0.861 B_Memory LOneK1K
ENSG00000287510 AL137857.1 193802 sc-eQTL 6.00e-02 -0.182 0.0964 0.861 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -371293 sc-eQTL 8.03e-01 -0.0284 0.114 0.861 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 2.48e-01 -0.104 0.0897 0.861 B_Naive LOneK1K
ENSG00000134644 PUM1 -140496 sc-eQTL 8.41e-01 0.0171 0.0852 0.861 B_Naive LOneK1K
ENSG00000162510 MATN1 201910 sc-eQTL 6.75e-01 0.0344 0.082 0.861 B_Naive LOneK1K
ENSG00000162511 LAPTM5 167721 sc-eQTL 9.75e-01 -0.00178 0.0577 0.861 B_Naive LOneK1K
ENSG00000162517 PEF1 -719401 sc-eQTL 2.64e-01 0.118 0.105 0.861 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 2.34e-01 0.0887 0.0743 0.861 B_Naive LOneK1K
ENSG00000287510 AL137857.1 193802 sc-eQTL 7.92e-01 -0.0234 0.0885 0.861 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -371293 sc-eQTL 7.86e-01 0.026 0.0954 0.861 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 5.42e-01 0.066 0.108 0.861 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -140496 sc-eQTL 7.24e-01 -0.0243 0.0689 0.861 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 167721 sc-eQTL 7.55e-01 0.0189 0.0606 0.861 CD14_Mono LOneK1K
ENSG00000162512 SDC3 16737 sc-eQTL 3.84e-02 -0.255 0.122 0.861 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -719401 sc-eQTL 9.74e-01 0.00286 0.0869 0.861 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -484070 sc-eQTL 6.34e-01 -0.0606 0.127 0.861 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -580731 sc-eQTL 3.83e-01 -0.0909 0.104 0.861 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 193802 sc-eQTL 8.04e-01 0.0242 0.0976 0.861 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -371293 sc-eQTL 5.36e-01 0.0638 0.103 0.86 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 3.16e-01 -0.113 0.112 0.86 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -140496 sc-eQTL 8.34e-02 -0.159 0.0916 0.86 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 167721 sc-eQTL 4.79e-01 0.0522 0.0737 0.86 CD16_Mono LOneK1K
ENSG00000162512 SDC3 16737 sc-eQTL 1.88e-02 -0.252 0.106 0.86 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -719401 sc-eQTL 5.82e-01 0.054 0.0979 0.86 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -484070 sc-eQTL 9.21e-01 0.0111 0.112 0.86 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -580731 sc-eQTL 8.50e-01 -0.0201 0.106 0.86 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 193802 sc-eQTL 2.28e-01 -0.128 0.106 0.86 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -371293 sc-eQTL 1.88e-01 -0.153 0.116 0.86 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -839398 sc-eQTL 4.12e-01 0.0813 0.099 0.86 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -371487 sc-eQTL 4.85e-01 0.0555 0.0795 0.86 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -140496 sc-eQTL 2.11e-01 0.109 0.0868 0.86 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 167721 sc-eQTL 4.33e-02 0.196 0.0965 0.86 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -719401 sc-eQTL 8.18e-01 0.017 0.074 0.86 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 206991 sc-eQTL 8.24e-01 0.025 0.112 0.86 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 193802 sc-eQTL 1.79e-01 -0.13 0.0966 0.86 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -371293 eQTL 0.00703 0.0661 0.0245 0.00122 0.0 0.132
ENSG00000121766 ZCCHC17 -371487 eQTL 3.08e-04 0.0928 0.0256 0.0 0.0 0.132
ENSG00000162512 SDC3 16737 eQTL 1.41e-10 -0.227 0.035 0.0 0.0 0.132
ENSG00000168528 SERINC2 -484070 eQTL 0.00503 -0.157 0.0559 0.0 0.0 0.132
ENSG00000237329 AL356320.2 -111239 eQTL 0.00577 0.14 0.0505 0.00193 0.0 0.132

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -371487 1.27e-06 8.78e-07 2.88e-07 3.43e-07 1.96e-07 3.2e-07 7.32e-07 2.84e-07 8.46e-07 3.09e-07 1.12e-06 5.95e-07 1.3e-06 2.05e-07 4.17e-07 4.91e-07 7.47e-07 5.27e-07 4.82e-07 4.06e-07 2.8e-07 6.91e-07 5.63e-07 4.38e-07 1.57e-06 2.55e-07 5.83e-07 4.75e-07 7.07e-07 9.22e-07 4.61e-07 3.9e-08 1.79e-07 2.84e-07 3.4e-07 2.99e-07 3.14e-07 1.46e-07 1.55e-07 7.66e-08 1.97e-07 9.76e-07 5.29e-08 9.69e-08 1.82e-07 7.5e-08 1.6e-07 8.66e-08 8.44e-08
ENSG00000162512 SDC3 16737 2.06e-05 2.41e-05 4.87e-06 1.32e-05 4.53e-06 1.15e-05 3.31e-05 3.8e-06 2.24e-05 1.19e-05 2.99e-05 1.23e-05 3.92e-05 1.13e-05 6.04e-06 1.37e-05 1.34e-05 1.97e-05 7.02e-06 6.02e-06 1.19e-05 2.47e-05 2.35e-05 7.77e-06 3.59e-05 6.28e-06 1.04e-05 9.9e-06 2.61e-05 2.45e-05 1.51e-05 1.54e-06 2.59e-06 6.8e-06 9.74e-06 5.17e-06 3.1e-06 3.16e-06 4.58e-06 3.36e-06 1.74e-06 2.92e-05 2.86e-06 3.84e-07 2.16e-06 3.36e-06 3.74e-06 1.53e-06 1.52e-06
ENSG00000237329 AL356320.2 -111239 4.54e-06 5.07e-06 6.06e-07 3.05e-06 1.7e-06 1.6e-06 5.49e-06 1.18e-06 5e-06 2.97e-06 6.14e-06 3.37e-06 7.67e-06 1.76e-06 1.23e-06 3.72e-06 1.9e-06 3.85e-06 1.51e-06 1.37e-06 2.89e-06 4.75e-06 4.62e-06 1.46e-06 8.26e-06 2.01e-06 2.27e-06 1.55e-06 4.47e-06 4.97e-06 2.85e-06 4.18e-07 7.66e-07 1.84e-06 1.93e-06 1.16e-06 1.08e-06 5.45e-07 8.77e-07 5.79e-07 7.54e-07 6.1e-06 6.31e-07 1.44e-07 7.89e-07 1.12e-06 1.16e-06 6.74e-07 5.13e-07