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Genes within 1Mb (chr1:30924142:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -372646 sc-eQTL 3.94e-01 -0.0655 0.0766 0.551 B L1
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 3.12e-01 -0.0621 0.0613 0.551 B L1
ENSG00000134644 PUM1 -141849 sc-eQTL 6.72e-02 0.0941 0.0512 0.551 B L1
ENSG00000162510 MATN1 200557 sc-eQTL 5.92e-01 0.0291 0.0542 0.551 B L1
ENSG00000162511 LAPTM5 166368 sc-eQTL 5.59e-01 0.0249 0.0424 0.551 B L1
ENSG00000162517 PEF1 -720754 sc-eQTL 4.55e-01 -0.0479 0.064 0.551 B L1
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 4.54e-01 -0.0373 0.0497 0.551 B L1
ENSG00000287510 AL137857.1 192449 sc-eQTL 7.50e-01 0.0188 0.0589 0.551 B L1
ENSG00000060688 SNRNP40 -372646 sc-eQTL 4.87e-01 0.0462 0.0663 0.551 CD4T L1
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 6.05e-01 -0.0269 0.0518 0.551 CD4T L1
ENSG00000134644 PUM1 -141849 sc-eQTL 2.73e-02 0.101 0.0456 0.551 CD4T L1
ENSG00000162511 LAPTM5 166368 sc-eQTL 6.82e-01 0.021 0.0511 0.551 CD4T L1
ENSG00000162517 PEF1 -720754 sc-eQTL 7.67e-01 0.0159 0.0535 0.551 CD4T L1
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 4.57e-02 -0.0911 0.0453 0.551 CD4T L1
ENSG00000287510 AL137857.1 192449 sc-eQTL 7.56e-01 -0.0171 0.0548 0.551 CD4T L1
ENSG00000060688 SNRNP40 -372646 sc-eQTL 6.04e-01 0.0453 0.0871 0.551 CD8T L1
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 9.83e-01 0.00121 0.058 0.551 CD8T L1
ENSG00000134644 PUM1 -141849 sc-eQTL 9.49e-03 0.132 0.0503 0.551 CD8T L1
ENSG00000162511 LAPTM5 166368 sc-eQTL 5.31e-02 0.0956 0.0492 0.551 CD8T L1
ENSG00000162517 PEF1 -720754 sc-eQTL 1.71e-01 0.0835 0.0608 0.551 CD8T L1
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 2.81e-01 0.0627 0.058 0.551 CD8T L1
ENSG00000287510 AL137857.1 192449 sc-eQTL 5.64e-02 -0.139 0.0724 0.551 CD8T L1
ENSG00000060688 SNRNP40 -372646 sc-eQTL 4.35e-01 -0.0607 0.0777 0.554 DC L1
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 3.70e-01 -0.0827 0.0919 0.554 DC L1
ENSG00000134644 PUM1 -141849 sc-eQTL 5.23e-01 -0.0461 0.0721 0.554 DC L1
ENSG00000162511 LAPTM5 166368 sc-eQTL 7.54e-01 0.0161 0.0515 0.554 DC L1
ENSG00000162517 PEF1 -720754 sc-eQTL 8.52e-01 -0.0156 0.0835 0.554 DC L1
ENSG00000168528 SERINC2 -485423 sc-eQTL 1.28e-01 0.129 0.0845 0.554 DC L1
ENSG00000284543 LINC01226 -582084 sc-eQTL 9.15e-01 -0.00605 0.0563 0.554 DC L1
ENSG00000287510 AL137857.1 192449 sc-eQTL 7.85e-01 0.0223 0.0815 0.554 DC L1
ENSG00000060688 SNRNP40 -372646 sc-eQTL 5.87e-01 -0.0326 0.0599 0.551 Mono L1
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 9.39e-01 0.00565 0.0743 0.551 Mono L1
ENSG00000134644 PUM1 -141849 sc-eQTL 8.49e-01 -0.00911 0.0477 0.551 Mono L1
ENSG00000162511 LAPTM5 166368 sc-eQTL 5.93e-01 0.0235 0.0438 0.551 Mono L1
ENSG00000162512 SDC3 15384 sc-eQTL 2.57e-03 -0.252 0.0825 0.551 Mono L1
ENSG00000162517 PEF1 -720754 sc-eQTL 9.34e-01 0.00487 0.0591 0.551 Mono L1
ENSG00000168528 SERINC2 -485423 sc-eQTL 9.37e-01 0.00721 0.0904 0.551 Mono L1
ENSG00000284543 LINC01226 -582084 sc-eQTL 4.24e-01 0.0637 0.0795 0.551 Mono L1
ENSG00000287510 AL137857.1 192449 sc-eQTL 2.01e-01 0.089 0.0693 0.551 Mono L1
ENSG00000060688 SNRNP40 -372646 sc-eQTL 3.66e-01 0.0763 0.0842 0.552 NK L1
ENSG00000121753 ADGRB2 -840751 sc-eQTL 2.56e-01 0.0825 0.0724 0.552 NK L1
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 6.03e-02 -0.108 0.0573 0.552 NK L1
ENSG00000134644 PUM1 -141849 sc-eQTL 1.30e-02 0.15 0.0597 0.552 NK L1
ENSG00000162511 LAPTM5 166368 sc-eQTL 3.31e-02 0.148 0.069 0.552 NK L1
ENSG00000162517 PEF1 -720754 sc-eQTL 6.68e-01 0.0218 0.0509 0.552 NK L1
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 9.35e-01 -0.00636 0.0784 0.552 NK L1
ENSG00000287510 AL137857.1 192449 sc-eQTL 9.95e-01 0.000451 0.0724 0.552 NK L1
ENSG00000060688 SNRNP40 -372646 sc-eQTL 9.69e-01 0.00247 0.0632 0.551 Other_T L1
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 2.61e-01 -0.0759 0.0674 0.551 Other_T L1
ENSG00000134644 PUM1 -141849 sc-eQTL 1.66e-02 0.145 0.0599 0.551 Other_T L1
ENSG00000162511 LAPTM5 166368 sc-eQTL 4.46e-01 0.038 0.0497 0.551 Other_T L1
ENSG00000162517 PEF1 -720754 sc-eQTL 1.25e-01 0.102 0.0661 0.551 Other_T L1
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 4.73e-01 -0.0586 0.0814 0.551 Other_T L1
ENSG00000287510 AL137857.1 192449 sc-eQTL 6.05e-01 -0.044 0.0849 0.551 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -372646 sc-eQTL 3.87e-01 0.0881 0.102 0.548 B_Activated L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 2.42e-01 -0.12 0.102 0.548 B_Activated L2
ENSG00000134644 PUM1 -141849 sc-eQTL 3.70e-01 -0.0856 0.0953 0.548 B_Activated L2
ENSG00000162510 MATN1 200557 sc-eQTL 6.74e-01 -0.0352 0.0835 0.548 B_Activated L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 6.92e-01 0.0231 0.0582 0.548 B_Activated L2
ENSG00000162517 PEF1 -720754 sc-eQTL 2.05e-01 -0.125 0.0987 0.548 B_Activated L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 4.14e-03 -0.267 0.0918 0.548 B_Activated L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 8.63e-01 -0.0143 0.0832 0.548 B_Activated L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 3.20e-01 -0.095 0.0953 0.554 B_Intermediate L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 7.12e-01 -0.0294 0.0795 0.554 B_Intermediate L2
ENSG00000134644 PUM1 -141849 sc-eQTL 1.09e-01 -0.12 0.0746 0.554 B_Intermediate L2
ENSG00000162510 MATN1 200557 sc-eQTL 3.15e-02 -0.167 0.0773 0.554 B_Intermediate L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 8.71e-01 -0.00781 0.048 0.554 B_Intermediate L2
ENSG00000162517 PEF1 -720754 sc-eQTL 7.26e-01 0.0312 0.089 0.554 B_Intermediate L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 7.02e-01 0.0257 0.0673 0.554 B_Intermediate L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 6.38e-01 -0.0355 0.0753 0.554 B_Intermediate L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 5.35e-01 0.0579 0.0931 0.552 B_Memory L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 3.75e-01 -0.0762 0.0857 0.552 B_Memory L2
ENSG00000134644 PUM1 -141849 sc-eQTL 6.07e-02 0.14 0.0741 0.552 B_Memory L2
ENSG00000162510 MATN1 200557 sc-eQTL 4.39e-01 0.0554 0.0714 0.552 B_Memory L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 6.44e-01 -0.0293 0.0633 0.552 B_Memory L2
ENSG00000162517 PEF1 -720754 sc-eQTL 3.61e-01 -0.0772 0.0844 0.552 B_Memory L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 3.38e-01 -0.0695 0.0723 0.552 B_Memory L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 5.20e-01 0.0546 0.0848 0.552 B_Memory L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 1.00e+00 -2.47e-05 0.0844 0.551 B_Naive1 L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 5.93e-01 -0.039 0.0728 0.551 B_Naive1 L2
ENSG00000134644 PUM1 -141849 sc-eQTL 6.08e-02 0.12 0.0637 0.551 B_Naive1 L2
ENSG00000162510 MATN1 200557 sc-eQTL 4.86e-01 0.0455 0.0651 0.551 B_Naive1 L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 3.82e-01 0.038 0.0435 0.551 B_Naive1 L2
ENSG00000162517 PEF1 -720754 sc-eQTL 5.65e-01 0.0442 0.0767 0.551 B_Naive1 L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 5.10e-01 -0.0377 0.0571 0.551 B_Naive1 L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 8.21e-01 -0.016 0.0706 0.551 B_Naive1 L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 1.78e-02 -0.212 0.0886 0.552 B_Naive2 L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 3.97e-01 -0.0628 0.074 0.552 B_Naive2 L2
ENSG00000134644 PUM1 -141849 sc-eQTL 2.94e-01 0.0762 0.0724 0.552 B_Naive2 L2
ENSG00000162510 MATN1 200557 sc-eQTL 8.71e-01 0.0113 0.0696 0.552 B_Naive2 L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 9.59e-01 0.00244 0.0473 0.552 B_Naive2 L2
ENSG00000162517 PEF1 -720754 sc-eQTL 3.77e-01 -0.076 0.0859 0.552 B_Naive2 L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 8.12e-01 0.0164 0.0689 0.552 B_Naive2 L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 5.86e-02 0.14 0.0738 0.552 B_Naive2 L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 9.41e-01 0.00665 0.0905 0.543 CD4_CTL L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 1.10e-01 0.142 0.0884 0.543 CD4_CTL L2
ENSG00000134644 PUM1 -141849 sc-eQTL 5.76e-01 0.0489 0.0872 0.543 CD4_CTL L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 6.32e-01 -0.0373 0.0778 0.543 CD4_CTL L2
ENSG00000162517 PEF1 -720754 sc-eQTL 8.52e-01 -0.0149 0.0798 0.543 CD4_CTL L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 1.11e-02 -0.215 0.0837 0.543 CD4_CTL L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 7.26e-01 0.0264 0.0751 0.543 CD4_CTL L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 9.47e-01 -0.00464 0.0695 0.551 CD4_Naive L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 7.12e-01 -0.0228 0.0616 0.551 CD4_Naive L2
ENSG00000134644 PUM1 -141849 sc-eQTL 2.23e-01 0.0599 0.049 0.551 CD4_Naive L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 7.70e-01 0.0154 0.0527 0.551 CD4_Naive L2
ENSG00000162517 PEF1 -720754 sc-eQTL 9.22e-01 -0.00568 0.0578 0.551 CD4_Naive L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 1.76e-02 -0.126 0.0528 0.551 CD4_Naive L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 8.79e-01 -0.00939 0.0614 0.551 CD4_Naive L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 1.91e-01 0.114 0.0866 0.551 CD4_TCM L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 1.91e-01 0.0917 0.0698 0.551 CD4_TCM L2
ENSG00000134644 PUM1 -141849 sc-eQTL 6.32e-03 0.168 0.061 0.551 CD4_TCM L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 6.60e-01 0.0227 0.0515 0.551 CD4_TCM L2
ENSG00000162517 PEF1 -720754 sc-eQTL 5.12e-01 0.0453 0.0689 0.551 CD4_TCM L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 9.67e-01 -0.00274 0.0653 0.551 CD4_TCM L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 7.12e-01 0.0269 0.0727 0.551 CD4_TCM L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 2.77e-01 0.0951 0.0872 0.551 CD4_TEM L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 6.19e-01 -0.0415 0.0833 0.551 CD4_TEM L2
ENSG00000134644 PUM1 -141849 sc-eQTL 1.12e-01 0.11 0.069 0.551 CD4_TEM L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 2.39e-01 0.0827 0.07 0.551 CD4_TEM L2
ENSG00000162517 PEF1 -720754 sc-eQTL 4.30e-01 0.062 0.0785 0.551 CD4_TEM L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 9.46e-01 0.0056 0.0821 0.551 CD4_TEM L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 4.90e-01 0.0559 0.0808 0.551 CD4_TEM L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 6.16e-01 0.0475 0.0947 0.551 CD8_CTL L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 6.87e-02 0.132 0.0721 0.551 CD8_CTL L2
ENSG00000134644 PUM1 -141849 sc-eQTL 6.18e-02 0.131 0.07 0.551 CD8_CTL L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 4.38e-03 0.221 0.0767 0.551 CD8_CTL L2
ENSG00000162517 PEF1 -720754 sc-eQTL 6.49e-01 0.031 0.068 0.551 CD8_CTL L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 6.19e-01 -0.0409 0.0821 0.551 CD8_CTL L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 5.79e-01 -0.0429 0.0772 0.551 CD8_CTL L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 7.80e-01 0.0242 0.0865 0.551 CD8_Naive L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 6.49e-01 -0.034 0.0746 0.551 CD8_Naive L2
ENSG00000134644 PUM1 -141849 sc-eQTL 3.34e-01 0.0581 0.0599 0.551 CD8_Naive L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 1.14e-01 0.0908 0.0572 0.551 CD8_Naive L2
ENSG00000162517 PEF1 -720754 sc-eQTL 2.60e-01 0.0901 0.0798 0.551 CD8_Naive L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 7.34e-01 0.0245 0.0718 0.551 CD8_Naive L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 3.57e-01 -0.0721 0.0781 0.551 CD8_Naive L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 1.65e-01 -0.139 0.1 0.551 CD8_TCM L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 3.34e-01 -0.0889 0.0919 0.551 CD8_TCM L2
ENSG00000134644 PUM1 -141849 sc-eQTL 1.51e-01 0.124 0.0861 0.551 CD8_TCM L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 1.51e-01 0.13 0.0902 0.551 CD8_TCM L2
ENSG00000162517 PEF1 -720754 sc-eQTL 2.69e-01 0.102 0.0923 0.551 CD8_TCM L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 8.04e-01 0.0209 0.0839 0.551 CD8_TCM L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 4.01e-01 0.0713 0.0847 0.551 CD8_TCM L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 4.53e-01 0.0684 0.0909 0.548 CD8_TEM L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 1.30e-01 -0.132 0.0868 0.548 CD8_TEM L2
ENSG00000134644 PUM1 -141849 sc-eQTL 5.97e-01 0.0472 0.0892 0.548 CD8_TEM L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 3.93e-01 0.0717 0.0837 0.548 CD8_TEM L2
ENSG00000162517 PEF1 -720754 sc-eQTL 8.80e-01 -0.012 0.079 0.548 CD8_TEM L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 6.62e-01 0.0381 0.087 0.548 CD8_TEM L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 1.60e-01 -0.11 0.0784 0.548 CD8_TEM L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 1.83e-01 -0.125 0.0937 0.545 MAIT L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 7.95e-01 -0.0217 0.0834 0.545 MAIT L2
ENSG00000134644 PUM1 -141849 sc-eQTL 9.86e-03 0.205 0.0787 0.545 MAIT L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 3.73e-01 0.0672 0.0753 0.545 MAIT L2
ENSG00000162517 PEF1 -720754 sc-eQTL 9.80e-01 0.00206 0.0829 0.545 MAIT L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 5.37e-01 -0.0519 0.0839 0.545 MAIT L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 8.26e-01 0.0191 0.0866 0.545 MAIT L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 6.87e-01 0.0381 0.0943 0.553 NK_CD56bright L2
ENSG00000121753 ADGRB2 -840751 sc-eQTL 1.70e-01 -0.101 0.0735 0.553 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 8.00e-02 -0.139 0.0791 0.553 NK_CD56bright L2
ENSG00000134644 PUM1 -141849 sc-eQTL 8.75e-01 0.0132 0.0837 0.553 NK_CD56bright L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 1.38e-01 0.122 0.0821 0.553 NK_CD56bright L2
ENSG00000162517 PEF1 -720754 sc-eQTL 9.18e-01 0.0083 0.0802 0.553 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 8.06e-01 0.0204 0.0829 0.553 NK_CD56bright L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 6.59e-01 -0.0361 0.0817 0.553 NK_CD56bright L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 5.93e-02 0.167 0.0881 0.552 NK_CD56dim L2
ENSG00000121753 ADGRB2 -840751 sc-eQTL 7.61e-02 0.138 0.0776 0.552 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 4.11e-01 -0.054 0.0656 0.552 NK_CD56dim L2
ENSG00000134644 PUM1 -141849 sc-eQTL 4.81e-02 0.133 0.0668 0.552 NK_CD56dim L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 1.48e-01 0.104 0.0715 0.552 NK_CD56dim L2
ENSG00000162517 PEF1 -720754 sc-eQTL 4.02e-01 0.0537 0.0639 0.552 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 7.73e-01 -0.026 0.0901 0.552 NK_CD56dim L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 2.66e-01 -0.0826 0.0741 0.552 NK_CD56dim L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 5.96e-01 0.0504 0.095 0.543 NK_HLA L2
ENSG00000121753 ADGRB2 -840751 sc-eQTL 4.04e-01 0.0629 0.0753 0.543 NK_HLA L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 8.62e-01 -0.0148 0.0848 0.543 NK_HLA L2
ENSG00000134644 PUM1 -141849 sc-eQTL 1.30e-01 0.125 0.0822 0.543 NK_HLA L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 1.75e-01 0.107 0.0785 0.543 NK_HLA L2
ENSG00000162517 PEF1 -720754 sc-eQTL 4.22e-02 -0.18 0.088 0.543 NK_HLA L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 8.49e-02 0.144 0.0833 0.543 NK_HLA L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 6.16e-02 0.151 0.0804 0.543 NK_HLA L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 6.19e-01 -0.043 0.0862 0.552 NK_cytokine L2
ENSG00000121753 ADGRB2 -840751 sc-eQTL 9.80e-01 0.00191 0.0779 0.552 NK_cytokine L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 2.96e-01 -0.0703 0.0671 0.552 NK_cytokine L2
ENSG00000134644 PUM1 -141849 sc-eQTL 2.14e-01 0.0904 0.0725 0.552 NK_cytokine L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 9.84e-03 0.205 0.0789 0.552 NK_cytokine L2
ENSG00000162517 PEF1 -720754 sc-eQTL 5.03e-01 0.0457 0.0682 0.552 NK_cytokine L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 8.82e-01 0.0126 0.0849 0.552 NK_cytokine L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 1.38e-02 0.193 0.0779 0.552 NK_cytokine L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 4.34e-01 -0.0812 0.103 0.537 PB L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 9.02e-01 -0.0149 0.12 0.537 PB L2
ENSG00000134644 PUM1 -141849 sc-eQTL 5.90e-01 0.0564 0.104 0.537 PB L2
ENSG00000162510 MATN1 200557 sc-eQTL 4.50e-01 -0.0737 0.0972 0.537 PB L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 6.87e-01 0.0281 0.0695 0.537 PB L2
ENSG00000162517 PEF1 -720754 sc-eQTL 2.15e-01 -0.133 0.106 0.537 PB L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 3.19e-01 -0.0948 0.0948 0.537 PB L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 3.67e-01 -0.0916 0.101 0.537 PB L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 1.01e-01 0.112 0.0679 0.552 Pro_T L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 1.07e-02 -0.22 0.0854 0.552 Pro_T L2
ENSG00000134644 PUM1 -141849 sc-eQTL 4.94e-01 0.0554 0.0809 0.552 Pro_T L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 3.14e-01 -0.0585 0.0579 0.552 Pro_T L2
ENSG00000162517 PEF1 -720754 sc-eQTL 2.46e-02 -0.191 0.0842 0.552 Pro_T L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 4.21e-01 -0.0654 0.081 0.552 Pro_T L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 4.92e-01 -0.0514 0.0746 0.552 Pro_T L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 7.90e-01 0.0241 0.0901 0.551 Treg L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 7.70e-01 -0.0255 0.0872 0.551 Treg L2
ENSG00000134644 PUM1 -141849 sc-eQTL 7.28e-01 -0.0243 0.0697 0.551 Treg L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 1.10e-01 0.127 0.0794 0.551 Treg L2
ENSG00000162517 PEF1 -720754 sc-eQTL 6.19e-01 -0.0429 0.0862 0.551 Treg L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 3.67e-01 0.0734 0.0812 0.551 Treg L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 3.39e-01 -0.0777 0.0811 0.551 Treg L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 5.60e-01 -0.0524 0.0899 0.563 cDC L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 1.35e-01 -0.145 0.0968 0.563 cDC L2
ENSG00000134644 PUM1 -141849 sc-eQTL 4.00e-01 0.0705 0.0835 0.563 cDC L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 6.80e-01 -0.0242 0.0586 0.563 cDC L2
ENSG00000162517 PEF1 -720754 sc-eQTL 3.00e-01 0.088 0.0847 0.563 cDC L2
ENSG00000168528 SERINC2 -485423 sc-eQTL 8.66e-01 -0.0127 0.0753 0.563 cDC L2
ENSG00000284543 LINC01226 -582084 sc-eQTL 7.45e-02 -0.132 0.0733 0.563 cDC L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 5.94e-01 0.0425 0.0796 0.563 cDC L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 2.98e-01 -0.0751 0.072 0.551 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 1.50e-01 -0.116 0.0801 0.551 cMono_IL1B L2
ENSG00000134644 PUM1 -141849 sc-eQTL 8.50e-01 -0.0103 0.0545 0.551 cMono_IL1B L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 3.92e-01 0.0409 0.0477 0.551 cMono_IL1B L2
ENSG00000162512 SDC3 15384 sc-eQTL 1.83e-02 -0.211 0.0889 0.551 cMono_IL1B L2
ENSG00000162517 PEF1 -720754 sc-eQTL 8.41e-01 0.0148 0.0736 0.551 cMono_IL1B L2
ENSG00000168528 SERINC2 -485423 sc-eQTL 9.97e-01 -0.000302 0.0912 0.551 cMono_IL1B L2
ENSG00000284543 LINC01226 -582084 sc-eQTL 2.55e-01 0.0918 0.0804 0.551 cMono_IL1B L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 1.27e-01 0.115 0.0748 0.551 cMono_IL1B L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 2.17e-01 0.0935 0.0755 0.551 cMono_S100A L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 3.41e-02 0.189 0.0885 0.551 cMono_S100A L2
ENSG00000134644 PUM1 -141849 sc-eQTL 9.77e-01 -0.00188 0.0647 0.551 cMono_S100A L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 6.40e-01 0.0233 0.0497 0.551 cMono_S100A L2
ENSG00000162512 SDC3 15384 sc-eQTL 5.83e-02 -0.162 0.0851 0.551 cMono_S100A L2
ENSG00000162517 PEF1 -720754 sc-eQTL 4.52e-01 -0.0583 0.0774 0.551 cMono_S100A L2
ENSG00000168528 SERINC2 -485423 sc-eQTL 8.67e-01 0.0152 0.0909 0.551 cMono_S100A L2
ENSG00000284543 LINC01226 -582084 sc-eQTL 9.51e-01 -0.00455 0.0738 0.551 cMono_S100A L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 5.75e-01 0.0416 0.0741 0.551 cMono_S100A L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 2.59e-01 -0.126 0.111 0.552 gdT L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 4.11e-01 0.079 0.0958 0.552 gdT L2
ENSG00000134644 PUM1 -141849 sc-eQTL 3.57e-01 -0.0911 0.0987 0.552 gdT L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 5.78e-01 0.06 0.107 0.552 gdT L2
ENSG00000162517 PEF1 -720754 sc-eQTL 7.61e-03 0.26 0.096 0.552 gdT L2
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 3.38e-01 -0.0951 0.0989 0.552 gdT L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 2.78e-02 -0.21 0.0945 0.552 gdT L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 9.85e-01 -0.00166 0.0854 0.558 intMono L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 6.60e-01 0.0404 0.0917 0.558 intMono L2
ENSG00000134644 PUM1 -141849 sc-eQTL 3.36e-01 0.0749 0.0777 0.558 intMono L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 1.43e-01 0.0892 0.0608 0.558 intMono L2
ENSG00000162512 SDC3 15384 sc-eQTL 9.43e-02 -0.14 0.0831 0.558 intMono L2
ENSG00000162517 PEF1 -720754 sc-eQTL 5.19e-01 0.0567 0.0878 0.558 intMono L2
ENSG00000168528 SERINC2 -485423 sc-eQTL 8.13e-01 0.0207 0.0875 0.558 intMono L2
ENSG00000284543 LINC01226 -582084 sc-eQTL 5.04e-01 -0.0555 0.0829 0.558 intMono L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 6.79e-01 -0.0344 0.083 0.558 intMono L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 9.23e-01 -0.0077 0.0791 0.55 ncMono L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 7.98e-01 -0.0216 0.0843 0.55 ncMono L2
ENSG00000134644 PUM1 -141849 sc-eQTL 8.35e-01 -0.0144 0.0689 0.55 ncMono L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 1.23e-01 0.0962 0.0622 0.55 ncMono L2
ENSG00000162512 SDC3 15384 sc-eQTL 2.81e-02 -0.153 0.0693 0.55 ncMono L2
ENSG00000162517 PEF1 -720754 sc-eQTL 5.11e-01 -0.0528 0.0803 0.55 ncMono L2
ENSG00000168528 SERINC2 -485423 sc-eQTL 9.85e-01 0.0014 0.0766 0.55 ncMono L2
ENSG00000284543 LINC01226 -582084 sc-eQTL 5.85e-01 0.0418 0.0764 0.55 ncMono L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 6.83e-01 0.0324 0.0793 0.55 ncMono L2
ENSG00000060688 SNRNP40 -372646 sc-eQTL 4.80e-01 -0.0647 0.0914 0.554 pDC L2
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 6.34e-01 0.0479 0.1 0.554 pDC L2
ENSG00000134644 PUM1 -141849 sc-eQTL 9.94e-01 -0.000614 0.0833 0.554 pDC L2
ENSG00000162511 LAPTM5 166368 sc-eQTL 7.39e-01 0.0258 0.0774 0.554 pDC L2
ENSG00000162517 PEF1 -720754 sc-eQTL 2.26e-01 -0.121 0.1 0.554 pDC L2
ENSG00000168528 SERINC2 -485423 sc-eQTL 4.61e-02 0.186 0.0927 0.554 pDC L2
ENSG00000284543 LINC01226 -582084 sc-eQTL 7.66e-01 -0.0217 0.0729 0.554 pDC L2
ENSG00000287510 AL137857.1 192449 sc-eQTL 4.67e-01 0.0623 0.0856 0.554 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -372646 sc-eQTL 8.58e-01 -0.0165 0.0916 0.551 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 1.78e-01 -0.103 0.0759 0.551 B_Memory LOneK1K
ENSG00000134644 PUM1 -141849 sc-eQTL 8.95e-01 -0.00896 0.0676 0.551 B_Memory LOneK1K
ENSG00000162510 MATN1 200557 sc-eQTL 4.24e-01 -0.0617 0.0769 0.551 B_Memory LOneK1K
ENSG00000162511 LAPTM5 166368 sc-eQTL 3.55e-01 -0.0448 0.0483 0.551 B_Memory LOneK1K
ENSG00000162517 PEF1 -720754 sc-eQTL 8.47e-01 -0.0155 0.0802 0.551 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 2.07e-01 -0.0807 0.0638 0.551 B_Memory LOneK1K
ENSG00000287510 AL137857.1 192449 sc-eQTL 5.61e-01 -0.0406 0.0697 0.551 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -372646 sc-eQTL 1.71e-01 -0.112 0.0816 0.551 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 6.24e-01 -0.0318 0.0648 0.551 B_Naive LOneK1K
ENSG00000134644 PUM1 -141849 sc-eQTL 3.34e-02 0.13 0.0607 0.551 B_Naive LOneK1K
ENSG00000162510 MATN1 200557 sc-eQTL 5.27e-01 0.0374 0.059 0.551 B_Naive LOneK1K
ENSG00000162511 LAPTM5 166368 sc-eQTL 3.81e-01 0.0364 0.0415 0.551 B_Naive LOneK1K
ENSG00000162517 PEF1 -720754 sc-eQTL 9.08e-01 0.00879 0.0759 0.551 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 6.32e-01 -0.0257 0.0536 0.551 B_Naive LOneK1K
ENSG00000287510 AL137857.1 192449 sc-eQTL 3.09e-01 0.0648 0.0636 0.551 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -372646 sc-eQTL 9.71e-01 -0.00246 0.0685 0.551 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 8.06e-01 0.0191 0.0776 0.551 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -141849 sc-eQTL 8.48e-01 -0.0095 0.0495 0.551 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 166368 sc-eQTL 7.68e-01 0.0129 0.0435 0.551 CD14_Mono LOneK1K
ENSG00000162512 SDC3 15384 sc-eQTL 2.98e-03 -0.261 0.0869 0.551 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -720754 sc-eQTL 9.10e-01 -0.00703 0.0624 0.551 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -485423 sc-eQTL 9.96e-01 -0.000447 0.0913 0.551 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -582084 sc-eQTL 2.60e-01 0.0843 0.0747 0.551 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 192449 sc-eQTL 2.06e-01 0.0886 0.0698 0.551 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -372646 sc-eQTL 9.23e-01 -0.00722 0.075 0.552 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 6.98e-01 -0.0319 0.082 0.552 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -141849 sc-eQTL 8.77e-01 -0.0104 0.0672 0.552 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 166368 sc-eQTL 2.27e-01 0.0649 0.0536 0.552 CD16_Mono LOneK1K
ENSG00000162512 SDC3 15384 sc-eQTL 5.70e-02 -0.149 0.0779 0.552 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -720754 sc-eQTL 7.56e-01 0.0222 0.0714 0.552 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -485423 sc-eQTL 8.40e-01 0.0165 0.0815 0.552 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -582084 sc-eQTL 6.28e-01 0.0375 0.0773 0.552 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 192449 sc-eQTL 9.29e-01 0.00693 0.0774 0.552 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -372646 sc-eQTL 3.91e-01 0.0724 0.0841 0.552 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -840751 sc-eQTL 1.54e-01 0.102 0.0715 0.552 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -372840 sc-eQTL 1.72e-01 -0.0786 0.0573 0.552 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -141849 sc-eQTL 1.54e-02 0.152 0.0622 0.552 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 166368 sc-eQTL 9.18e-02 0.119 0.07 0.552 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -720754 sc-eQTL 4.32e-01 0.0421 0.0535 0.552 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 205638 sc-eQTL 9.41e-01 0.00602 0.0813 0.552 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 192449 sc-eQTL 6.16e-01 0.0352 0.0701 0.552 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -372840 eQTL 3.13e-02 0.0384 0.0178 0.0 0.0 0.456
ENSG00000162512 SDC3 15384 eQTL 2.88e-14 -0.185 0.024 0.0 0.0 0.456
ENSG00000237329 AL356320.2 -112592 eQTL 0.00267 0.105 0.0349 0.00241 0.00168 0.456

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162512 SDC3 15384 1.86e-05 2.26e-05 3.46e-06 1.15e-05 3.07e-06 8.4e-06 2.53e-05 2.99e-06 1.73e-05 9.15e-06 2.41e-05 9.22e-06 3.3e-05 9.05e-06 5.19e-06 1.06e-05 1.02e-05 1.54e-05 4.67e-06 4.38e-06 8.81e-06 1.97e-05 1.95e-05 5.19e-06 2.96e-05 5.42e-06 8.05e-06 8.03e-06 1.98e-05 1.83e-05 1.25e-05 1.18e-06 1.68e-06 4.31e-06 7.58e-06 4.14e-06 1.85e-06 2.71e-06 3.21e-06 2.17e-06 1.21e-06 2.46e-05 2.67e-06 1.47e-07 1.84e-06 2.58e-06 2.91e-06 1.26e-06 9.89e-07
ENSG00000237329 AL356320.2 -112592 4.62e-06 5.12e-06 7.84e-07 3.09e-06 8.52e-07 1.71e-06 3.23e-06 9.86e-07 4.4e-06 2.01e-06 5.26e-06 3.41e-06 7.09e-06 2.06e-06 1.44e-06 2.63e-06 2.05e-06 2.75e-06 1.46e-06 9.72e-07 2.28e-06 4.14e-06 3.4e-06 1.82e-06 6.39e-06 1.38e-06 2.62e-06 1.67e-06 4.19e-06 4.36e-06 2.72e-06 4.34e-07 7.1e-07 1.61e-06 2.05e-06 9.97e-07 9.66e-07 4.75e-07 1.28e-06 3.63e-07 1.52e-07 5.49e-06 4.01e-07 1.81e-07 3.5e-07 3.53e-07 8.56e-07 4.4e-07 3.41e-07