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Genes within 1Mb (chr1:30917198:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -379590 sc-eQTL 4.66e-01 -0.0715 0.098 0.808 B L1
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 6.31e-01 -0.0378 0.0786 0.808 B L1
ENSG00000134644 PUM1 -148793 sc-eQTL 9.32e-01 0.0056 0.0659 0.808 B L1
ENSG00000162510 MATN1 193613 sc-eQTL 2.09e-01 0.087 0.0691 0.808 B L1
ENSG00000162511 LAPTM5 159424 sc-eQTL 1.47e-01 0.0786 0.054 0.808 B L1
ENSG00000162517 PEF1 -727698 sc-eQTL 4.46e-01 -0.0624 0.0818 0.808 B L1
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 1.53e-01 0.0908 0.0633 0.808 B L1
ENSG00000287510 AL137857.1 185505 sc-eQTL 3.32e-01 -0.073 0.0751 0.808 B L1
ENSG00000060688 SNRNP40 -379590 sc-eQTL 8.30e-01 0.0179 0.0832 0.808 CD4T L1
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 6.31e-01 0.0313 0.065 0.808 CD4T L1
ENSG00000134644 PUM1 -148793 sc-eQTL 1.81e-01 0.0773 0.0576 0.808 CD4T L1
ENSG00000162511 LAPTM5 159424 sc-eQTL 7.12e-01 -0.0237 0.0641 0.808 CD4T L1
ENSG00000162517 PEF1 -727698 sc-eQTL 5.42e-01 -0.041 0.067 0.808 CD4T L1
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 9.15e-01 -0.00615 0.0574 0.808 CD4T L1
ENSG00000287510 AL137857.1 185505 sc-eQTL 6.22e-01 -0.0339 0.0687 0.808 CD4T L1
ENSG00000060688 SNRNP40 -379590 sc-eQTL 9.40e-01 -0.00825 0.109 0.808 CD8T L1
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 6.38e-01 0.0343 0.0728 0.808 CD8T L1
ENSG00000134644 PUM1 -148793 sc-eQTL 7.88e-02 0.112 0.0636 0.808 CD8T L1
ENSG00000162511 LAPTM5 159424 sc-eQTL 4.63e-01 0.0457 0.0622 0.808 CD8T L1
ENSG00000162517 PEF1 -727698 sc-eQTL 5.90e-01 0.0414 0.0766 0.808 CD8T L1
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 4.81e-01 0.0514 0.0729 0.808 CD8T L1
ENSG00000287510 AL137857.1 185505 sc-eQTL 9.12e-01 -0.0101 0.0917 0.808 CD8T L1
ENSG00000060688 SNRNP40 -379590 sc-eQTL 9.34e-01 -0.00802 0.0973 0.802 DC L1
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 6.51e-01 -0.0522 0.115 0.802 DC L1
ENSG00000134644 PUM1 -148793 sc-eQTL 2.83e-01 -0.0969 0.09 0.802 DC L1
ENSG00000162511 LAPTM5 159424 sc-eQTL 4.16e-01 -0.0524 0.0643 0.802 DC L1
ENSG00000162517 PEF1 -727698 sc-eQTL 8.46e-01 -0.0204 0.104 0.802 DC L1
ENSG00000168528 SERINC2 -492367 sc-eQTL 6.84e-02 0.193 0.105 0.802 DC L1
ENSG00000284543 LINC01226 -589028 sc-eQTL 8.40e-01 -0.0143 0.0704 0.802 DC L1
ENSG00000287510 AL137857.1 185505 sc-eQTL 2.43e-01 0.119 0.102 0.802 DC L1
ENSG00000060688 SNRNP40 -379590 sc-eQTL 8.85e-01 -0.0109 0.0753 0.808 Mono L1
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 6.38e-01 -0.0439 0.0933 0.808 Mono L1
ENSG00000134644 PUM1 -148793 sc-eQTL 2.07e-01 -0.0755 0.0596 0.808 Mono L1
ENSG00000162511 LAPTM5 159424 sc-eQTL 8.84e-01 -0.00803 0.0551 0.808 Mono L1
ENSG00000162512 SDC3 8440 sc-eQTL 7.24e-01 -0.0374 0.106 0.808 Mono L1
ENSG00000162517 PEF1 -727698 sc-eQTL 8.07e-01 0.0181 0.0742 0.808 Mono L1
ENSG00000168528 SERINC2 -492367 sc-eQTL 8.75e-01 -0.0179 0.114 0.808 Mono L1
ENSG00000284543 LINC01226 -589028 sc-eQTL 2.62e-01 -0.112 0.0997 0.808 Mono L1
ENSG00000287510 AL137857.1 185505 sc-eQTL 2.24e-01 0.106 0.0871 0.808 Mono L1
ENSG00000060688 SNRNP40 -379590 sc-eQTL 4.35e-01 -0.0829 0.106 0.807 NK L1
ENSG00000121753 ADGRB2 -847695 sc-eQTL 4.69e-01 0.0662 0.0913 0.807 NK L1
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 6.86e-01 0.0294 0.0726 0.807 NK L1
ENSG00000134644 PUM1 -148793 sc-eQTL 7.33e-02 0.136 0.0756 0.807 NK L1
ENSG00000162511 LAPTM5 159424 sc-eQTL 3.47e-02 0.184 0.0868 0.807 NK L1
ENSG00000162517 PEF1 -727698 sc-eQTL 4.75e-01 0.0458 0.064 0.807 NK L1
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 6.22e-01 0.0486 0.0985 0.807 NK L1
ENSG00000287510 AL137857.1 185505 sc-eQTL 4.30e-01 -0.0719 0.0909 0.807 NK L1
ENSG00000060688 SNRNP40 -379590 sc-eQTL 2.36e-01 -0.0939 0.079 0.808 Other_T L1
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 2.77e-01 0.0921 0.0845 0.808 Other_T L1
ENSG00000134644 PUM1 -148793 sc-eQTL 2.74e-01 0.0833 0.076 0.808 Other_T L1
ENSG00000162511 LAPTM5 159424 sc-eQTL 4.64e-01 0.0458 0.0624 0.808 Other_T L1
ENSG00000162517 PEF1 -727698 sc-eQTL 8.46e-01 0.0163 0.0834 0.808 Other_T L1
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 5.77e-01 0.0572 0.102 0.808 Other_T L1
ENSG00000287510 AL137857.1 185505 sc-eQTL 5.25e-01 -0.0677 0.106 0.808 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -379590 sc-eQTL 2.10e-01 -0.163 0.13 0.811 B_Activated L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 3.11e-01 -0.133 0.131 0.811 B_Activated L2
ENSG00000134644 PUM1 -148793 sc-eQTL 9.98e-01 -0.000258 0.122 0.811 B_Activated L2
ENSG00000162510 MATN1 193613 sc-eQTL 3.16e-01 -0.107 0.106 0.811 B_Activated L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 6.83e-01 -0.0304 0.0745 0.811 B_Activated L2
ENSG00000162517 PEF1 -727698 sc-eQTL 6.41e-01 0.0592 0.127 0.811 B_Activated L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 3.28e-04 -0.425 0.116 0.811 B_Activated L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 7.26e-02 -0.19 0.105 0.811 B_Activated L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 1.93e-01 -0.157 0.12 0.807 B_Intermediate L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 4.74e-01 0.0718 0.1 0.807 B_Intermediate L2
ENSG00000134644 PUM1 -148793 sc-eQTL 2.22e-02 -0.215 0.0934 0.807 B_Intermediate L2
ENSG00000162510 MATN1 193613 sc-eQTL 3.67e-01 -0.0888 0.0982 0.807 B_Intermediate L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 4.69e-01 0.0438 0.0603 0.807 B_Intermediate L2
ENSG00000162517 PEF1 -727698 sc-eQTL 3.88e-01 -0.0969 0.112 0.807 B_Intermediate L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 5.41e-01 0.0519 0.0847 0.807 B_Intermediate L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 3.79e-01 -0.0834 0.0947 0.807 B_Intermediate L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 6.12e-01 0.0593 0.117 0.806 B_Memory L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 3.04e-01 -0.11 0.107 0.806 B_Memory L2
ENSG00000134644 PUM1 -148793 sc-eQTL 4.24e-01 -0.0748 0.0934 0.806 B_Memory L2
ENSG00000162510 MATN1 193613 sc-eQTL 3.10e-01 0.0909 0.0893 0.806 B_Memory L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 1.09e-01 0.127 0.0788 0.806 B_Memory L2
ENSG00000162517 PEF1 -727698 sc-eQTL 1.02e-01 -0.173 0.105 0.806 B_Memory L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 8.08e-03 -0.239 0.0893 0.806 B_Memory L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 4.79e-01 0.0754 0.106 0.806 B_Memory L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 4.43e-01 -0.0815 0.106 0.808 B_Naive1 L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 7.18e-01 0.0331 0.0916 0.808 B_Naive1 L2
ENSG00000134644 PUM1 -148793 sc-eQTL 8.31e-01 -0.0172 0.0808 0.808 B_Naive1 L2
ENSG00000162510 MATN1 193613 sc-eQTL 3.46e-01 0.0773 0.0819 0.808 B_Naive1 L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 9.69e-01 -0.00215 0.0548 0.808 B_Naive1 L2
ENSG00000162517 PEF1 -727698 sc-eQTL 5.75e-01 0.0542 0.0965 0.808 B_Naive1 L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 1.33e-01 0.108 0.0716 0.808 B_Naive1 L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 6.28e-01 -0.0431 0.0888 0.808 B_Naive1 L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 7.78e-01 -0.0324 0.115 0.807 B_Naive2 L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 8.36e-01 0.0196 0.0948 0.807 B_Naive2 L2
ENSG00000134644 PUM1 -148793 sc-eQTL 1.33e-01 0.139 0.0923 0.807 B_Naive2 L2
ENSG00000162510 MATN1 193613 sc-eQTL 5.24e-01 -0.0568 0.089 0.807 B_Naive2 L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 6.83e-01 -0.0247 0.0605 0.807 B_Naive2 L2
ENSG00000162517 PEF1 -727698 sc-eQTL 4.42e-01 0.0846 0.11 0.807 B_Naive2 L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 9.86e-01 0.00156 0.0881 0.807 B_Naive2 L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 7.90e-01 -0.0254 0.0952 0.807 B_Naive2 L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 9.93e-01 0.00103 0.113 0.807 CD4_CTL L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 3.34e-01 0.107 0.11 0.807 CD4_CTL L2
ENSG00000134644 PUM1 -148793 sc-eQTL 4.35e-01 0.0848 0.108 0.807 CD4_CTL L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 4.13e-01 -0.0793 0.0966 0.807 CD4_CTL L2
ENSG00000162517 PEF1 -727698 sc-eQTL 3.83e-01 -0.0865 0.099 0.807 CD4_CTL L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 4.12e-01 0.087 0.106 0.807 CD4_CTL L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 4.89e-01 0.0647 0.0933 0.807 CD4_CTL L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 9.84e-01 0.0018 0.0874 0.808 CD4_Naive L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 4.50e-01 0.0586 0.0774 0.808 CD4_Naive L2
ENSG00000134644 PUM1 -148793 sc-eQTL 2.39e-01 0.0728 0.0616 0.808 CD4_Naive L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 4.99e-01 -0.0449 0.0662 0.808 CD4_Naive L2
ENSG00000162517 PEF1 -727698 sc-eQTL 3.69e-01 -0.0653 0.0725 0.808 CD4_Naive L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 5.52e-01 -0.04 0.0672 0.808 CD4_Naive L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 9.70e-01 -0.00294 0.0772 0.808 CD4_Naive L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 1.67e-01 0.151 0.109 0.808 CD4_TCM L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 6.89e-01 0.0353 0.0881 0.808 CD4_TCM L2
ENSG00000134644 PUM1 -148793 sc-eQTL 8.53e-01 0.0145 0.078 0.808 CD4_TCM L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 6.58e-01 0.0287 0.0647 0.808 CD4_TCM L2
ENSG00000162517 PEF1 -727698 sc-eQTL 5.64e-01 0.0501 0.0867 0.808 CD4_TCM L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 8.53e-02 0.141 0.0816 0.808 CD4_TCM L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 1.28e-01 -0.139 0.091 0.808 CD4_TCM L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 5.46e-01 -0.0655 0.108 0.808 CD4_TEM L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 1.82e-01 0.138 0.103 0.808 CD4_TEM L2
ENSG00000134644 PUM1 -148793 sc-eQTL 6.85e-01 -0.0349 0.0859 0.808 CD4_TEM L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 4.87e-01 0.0604 0.0868 0.808 CD4_TEM L2
ENSG00000162517 PEF1 -727698 sc-eQTL 7.08e-02 0.175 0.0966 0.808 CD4_TEM L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 5.36e-01 -0.063 0.102 0.808 CD4_TEM L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 2.26e-01 0.121 0.0998 0.808 CD4_TEM L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 9.05e-01 -0.0145 0.122 0.808 CD8_CTL L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 9.31e-01 0.00815 0.0936 0.808 CD8_CTL L2
ENSG00000134644 PUM1 -148793 sc-eQTL 2.05e-01 0.115 0.0905 0.808 CD8_CTL L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 5.72e-01 0.0569 0.101 0.808 CD8_CTL L2
ENSG00000162517 PEF1 -727698 sc-eQTL 4.61e-01 0.0646 0.0875 0.808 CD8_CTL L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 3.89e-01 0.0911 0.106 0.808 CD8_CTL L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 9.12e-01 -0.0111 0.0995 0.808 CD8_CTL L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 6.12e-01 0.0551 0.108 0.808 CD8_Naive L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 3.63e-01 0.0851 0.0933 0.808 CD8_Naive L2
ENSG00000134644 PUM1 -148793 sc-eQTL 2.87e-01 0.08 0.075 0.808 CD8_Naive L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 7.96e-01 0.0186 0.0721 0.808 CD8_Naive L2
ENSG00000162517 PEF1 -727698 sc-eQTL 8.85e-01 -0.0145 0.1 0.808 CD8_Naive L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 6.22e-01 -0.0444 0.09 0.808 CD8_Naive L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 7.62e-01 -0.0297 0.098 0.808 CD8_Naive L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 7.85e-01 0.0335 0.123 0.808 CD8_TCM L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 9.74e-01 -0.00369 0.112 0.808 CD8_TCM L2
ENSG00000134644 PUM1 -148793 sc-eQTL 6.31e-03 0.286 0.104 0.808 CD8_TCM L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 9.49e-02 0.184 0.11 0.808 CD8_TCM L2
ENSG00000162517 PEF1 -727698 sc-eQTL 3.71e-01 -0.101 0.113 0.808 CD8_TCM L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 5.67e-01 -0.0588 0.102 0.808 CD8_TCM L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 3.16e-02 0.222 0.102 0.808 CD8_TCM L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 3.51e-01 -0.108 0.115 0.806 CD8_TEM L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 2.45e-01 -0.128 0.11 0.806 CD8_TEM L2
ENSG00000134644 PUM1 -148793 sc-eQTL 6.03e-01 -0.0589 0.113 0.806 CD8_TEM L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 6.88e-02 -0.193 0.105 0.806 CD8_TEM L2
ENSG00000162517 PEF1 -727698 sc-eQTL 9.68e-01 0.00405 0.1 0.806 CD8_TEM L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 6.89e-02 0.2 0.109 0.806 CD8_TEM L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 5.08e-01 0.0662 0.0998 0.806 CD8_TEM L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 1.13e-01 -0.182 0.114 0.807 MAIT L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 1.98e-01 0.131 0.101 0.807 MAIT L2
ENSG00000134644 PUM1 -148793 sc-eQTL 2.07e-01 0.123 0.097 0.807 MAIT L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 6.99e-01 0.0355 0.0918 0.807 MAIT L2
ENSG00000162517 PEF1 -727698 sc-eQTL 2.66e-01 -0.112 0.101 0.807 MAIT L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 3.28e-01 0.1 0.102 0.807 MAIT L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 8.63e-01 -0.0182 0.105 0.807 MAIT L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 6.74e-01 -0.0495 0.118 0.807 NK_CD56bright L2
ENSG00000121753 ADGRB2 -847695 sc-eQTL 1.34e-01 -0.138 0.0916 0.807 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 9.93e-01 0.000927 0.0994 0.807 NK_CD56bright L2
ENSG00000134644 PUM1 -148793 sc-eQTL 2.04e-01 -0.132 0.104 0.807 NK_CD56bright L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 6.27e-01 0.0501 0.103 0.807 NK_CD56bright L2
ENSG00000162517 PEF1 -727698 sc-eQTL 5.50e-01 -0.0598 0.0999 0.807 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 3.56e-01 0.0956 0.103 0.807 NK_CD56bright L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 5.68e-01 0.0582 0.102 0.807 NK_CD56bright L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 7.63e-01 -0.0339 0.112 0.806 NK_CD56dim L2
ENSG00000121753 ADGRB2 -847695 sc-eQTL 4.61e-01 0.0728 0.0987 0.806 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 4.72e-01 0.0597 0.0829 0.806 NK_CD56dim L2
ENSG00000134644 PUM1 -148793 sc-eQTL 1.08e-01 0.137 0.0847 0.806 NK_CD56dim L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 5.79e-02 0.172 0.0901 0.806 NK_CD56dim L2
ENSG00000162517 PEF1 -727698 sc-eQTL 2.37e-01 0.0955 0.0806 0.806 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 8.88e-01 0.0161 0.114 0.806 NK_CD56dim L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 1.64e-01 -0.13 0.0935 0.806 NK_CD56dim L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 6.98e-02 -0.221 0.121 0.815 NK_HLA L2
ENSG00000121753 ADGRB2 -847695 sc-eQTL 9.68e-01 0.00386 0.097 0.815 NK_HLA L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 6.28e-01 -0.053 0.109 0.815 NK_HLA L2
ENSG00000134644 PUM1 -148793 sc-eQTL 5.19e-01 0.0686 0.106 0.815 NK_HLA L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 6.30e-01 0.0489 0.101 0.815 NK_HLA L2
ENSG00000162517 PEF1 -727698 sc-eQTL 3.90e-01 0.0983 0.114 0.815 NK_HLA L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 2.62e-01 0.121 0.108 0.815 NK_HLA L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 6.61e-01 0.0458 0.104 0.815 NK_HLA L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 9.22e-01 0.0108 0.11 0.806 NK_cytokine L2
ENSG00000121753 ADGRB2 -847695 sc-eQTL 9.64e-01 -0.00447 0.0996 0.806 NK_cytokine L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 5.79e-01 0.0478 0.086 0.806 NK_cytokine L2
ENSG00000134644 PUM1 -148793 sc-eQTL 2.94e-01 0.0976 0.0928 0.806 NK_cytokine L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 2.90e-01 0.109 0.102 0.806 NK_cytokine L2
ENSG00000162517 PEF1 -727698 sc-eQTL 6.01e-01 0.0457 0.0873 0.806 NK_cytokine L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 7.69e-01 -0.0319 0.109 0.806 NK_cytokine L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 2.76e-01 0.11 0.101 0.806 NK_cytokine L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 3.03e-01 -0.131 0.127 0.8 PB L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 7.66e-01 -0.044 0.148 0.8 PB L2
ENSG00000134644 PUM1 -148793 sc-eQTL 5.07e-01 0.0854 0.128 0.8 PB L2
ENSG00000162510 MATN1 193613 sc-eQTL 7.45e-01 -0.039 0.12 0.8 PB L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 6.00e-01 -0.045 0.0854 0.8 PB L2
ENSG00000162517 PEF1 -727698 sc-eQTL 4.72e-01 -0.0948 0.131 0.8 PB L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 5.90e-01 -0.0631 0.117 0.8 PB L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 1.38e-01 0.184 0.123 0.8 PB L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 8.53e-01 0.016 0.0862 0.811 Pro_T L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 8.67e-01 0.0183 0.109 0.811 Pro_T L2
ENSG00000134644 PUM1 -148793 sc-eQTL 5.12e-01 0.067 0.102 0.811 Pro_T L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 1.54e-01 -0.104 0.0729 0.811 Pro_T L2
ENSG00000162517 PEF1 -727698 sc-eQTL 9.21e-02 -0.181 0.107 0.811 Pro_T L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 7.40e-01 -0.0339 0.102 0.811 Pro_T L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 5.29e-01 -0.0592 0.094 0.811 Pro_T L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 7.96e-01 0.0289 0.112 0.808 Treg L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 5.41e-01 0.0662 0.108 0.808 Treg L2
ENSG00000134644 PUM1 -148793 sc-eQTL 3.05e-01 0.0889 0.0865 0.808 Treg L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 6.72e-01 0.042 0.0992 0.808 Treg L2
ENSG00000162517 PEF1 -727698 sc-eQTL 7.42e-02 -0.191 0.106 0.808 Treg L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 9.16e-01 0.0107 0.101 0.808 Treg L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 6.50e-01 0.0459 0.101 0.808 Treg L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 1.63e-01 0.158 0.112 0.81 cDC L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 4.85e-01 -0.0856 0.122 0.81 cDC L2
ENSG00000134644 PUM1 -148793 sc-eQTL 5.68e-01 0.0601 0.105 0.81 cDC L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 4.43e-01 -0.0565 0.0736 0.81 cDC L2
ENSG00000162517 PEF1 -727698 sc-eQTL 3.64e-01 0.097 0.106 0.81 cDC L2
ENSG00000168528 SERINC2 -492367 sc-eQTL 9.72e-02 0.157 0.0939 0.81 cDC L2
ENSG00000284543 LINC01226 -589028 sc-eQTL 4.30e-01 -0.0733 0.0928 0.81 cDC L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 5.14e-01 0.0653 0.1 0.81 cDC L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 1.15e-01 -0.143 0.0903 0.808 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 7.30e-01 0.0349 0.101 0.808 cMono_IL1B L2
ENSG00000134644 PUM1 -148793 sc-eQTL 2.21e-01 -0.0839 0.0684 0.808 cMono_IL1B L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 9.01e-01 -0.00749 0.0602 0.808 cMono_IL1B L2
ENSG00000162512 SDC3 8440 sc-eQTL 7.33e-01 0.0387 0.113 0.808 cMono_IL1B L2
ENSG00000162517 PEF1 -727698 sc-eQTL 3.97e-01 0.0785 0.0925 0.808 cMono_IL1B L2
ENSG00000168528 SERINC2 -492367 sc-eQTL 8.61e-01 -0.0201 0.115 0.808 cMono_IL1B L2
ENSG00000284543 LINC01226 -589028 sc-eQTL 5.82e-01 -0.0559 0.101 0.808 cMono_IL1B L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 1.46e-01 0.137 0.0942 0.808 cMono_IL1B L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 7.00e-01 0.0366 0.095 0.808 cMono_S100A L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 8.79e-01 -0.0172 0.112 0.808 cMono_S100A L2
ENSG00000134644 PUM1 -148793 sc-eQTL 5.85e-01 0.0443 0.0811 0.808 cMono_S100A L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 5.11e-01 0.0411 0.0623 0.808 cMono_S100A L2
ENSG00000162512 SDC3 8440 sc-eQTL 7.12e-01 0.0398 0.108 0.808 cMono_S100A L2
ENSG00000162517 PEF1 -727698 sc-eQTL 5.11e-01 -0.064 0.0972 0.808 cMono_S100A L2
ENSG00000168528 SERINC2 -492367 sc-eQTL 7.41e-01 -0.0378 0.114 0.808 cMono_S100A L2
ENSG00000284543 LINC01226 -589028 sc-eQTL 1.74e-01 -0.126 0.0923 0.808 cMono_S100A L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 4.24e-01 0.0745 0.093 0.808 cMono_S100A L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 7.97e-02 -0.246 0.139 0.803 gdT L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 8.05e-01 0.0299 0.121 0.803 gdT L2
ENSG00000134644 PUM1 -148793 sc-eQTL 3.20e-01 -0.124 0.124 0.803 gdT L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 5.27e-01 0.0859 0.135 0.803 gdT L2
ENSG00000162517 PEF1 -727698 sc-eQTL 3.91e-02 0.254 0.122 0.803 gdT L2
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 4.67e-01 0.0909 0.125 0.803 gdT L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 2.95e-01 0.127 0.121 0.803 gdT L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 6.01e-01 0.0553 0.106 0.811 intMono L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 1.27e-01 -0.173 0.113 0.811 intMono L2
ENSG00000134644 PUM1 -148793 sc-eQTL 9.95e-01 0.000617 0.0964 0.811 intMono L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 8.51e-01 0.0143 0.0756 0.811 intMono L2
ENSG00000162512 SDC3 8440 sc-eQTL 8.85e-01 -0.0151 0.104 0.811 intMono L2
ENSG00000162517 PEF1 -727698 sc-eQTL 7.66e-01 0.0324 0.109 0.811 intMono L2
ENSG00000168528 SERINC2 -492367 sc-eQTL 6.06e-01 0.0559 0.108 0.811 intMono L2
ENSG00000284543 LINC01226 -589028 sc-eQTL 4.32e-01 -0.0807 0.103 0.811 intMono L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 8.08e-01 0.025 0.103 0.811 intMono L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 9.32e-01 -0.0083 0.0974 0.81 ncMono L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 4.34e-01 -0.0812 0.104 0.81 ncMono L2
ENSG00000134644 PUM1 -148793 sc-eQTL 5.84e-02 -0.16 0.0841 0.81 ncMono L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 7.69e-01 -0.0227 0.077 0.81 ncMono L2
ENSG00000162512 SDC3 8440 sc-eQTL 6.41e-01 -0.0403 0.0863 0.81 ncMono L2
ENSG00000162517 PEF1 -727698 sc-eQTL 9.84e-01 -0.00196 0.099 0.81 ncMono L2
ENSG00000168528 SERINC2 -492367 sc-eQTL 6.95e-01 0.0371 0.0942 0.81 ncMono L2
ENSG00000284543 LINC01226 -589028 sc-eQTL 8.96e-01 0.0123 0.0942 0.81 ncMono L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 6.95e-01 0.0384 0.0976 0.81 ncMono L2
ENSG00000060688 SNRNP40 -379590 sc-eQTL 3.70e-01 -0.0996 0.111 0.797 pDC L2
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 8.77e-01 -0.0189 0.122 0.797 pDC L2
ENSG00000134644 PUM1 -148793 sc-eQTL 4.38e-01 -0.0785 0.101 0.797 pDC L2
ENSG00000162511 LAPTM5 159424 sc-eQTL 9.98e-01 0.000281 0.094 0.797 pDC L2
ENSG00000162517 PEF1 -727698 sc-eQTL 8.73e-01 -0.0195 0.122 0.797 pDC L2
ENSG00000168528 SERINC2 -492367 sc-eQTL 3.91e-01 0.0978 0.114 0.797 pDC L2
ENSG00000284543 LINC01226 -589028 sc-eQTL 5.31e-01 0.0555 0.0884 0.797 pDC L2
ENSG00000287510 AL137857.1 185505 sc-eQTL 3.61e-01 0.0951 0.104 0.797 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -379590 sc-eQTL 2.69e-01 -0.13 0.117 0.808 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 4.24e-01 -0.078 0.0974 0.808 B_Memory LOneK1K
ENSG00000134644 PUM1 -148793 sc-eQTL 1.86e-02 -0.202 0.0854 0.808 B_Memory LOneK1K
ENSG00000162510 MATN1 193613 sc-eQTL 5.18e-01 -0.0637 0.0985 0.808 B_Memory LOneK1K
ENSG00000162511 LAPTM5 159424 sc-eQTL 2.87e-01 0.066 0.0618 0.808 B_Memory LOneK1K
ENSG00000162517 PEF1 -727698 sc-eQTL 2.23e-01 -0.125 0.102 0.808 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 6.42e-02 -0.151 0.0813 0.808 B_Memory LOneK1K
ENSG00000287510 AL137857.1 185505 sc-eQTL 7.89e-02 -0.157 0.0887 0.808 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -379590 sc-eQTL 6.65e-01 -0.0448 0.103 0.808 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 5.88e-01 0.0442 0.0815 0.808 B_Naive LOneK1K
ENSG00000134644 PUM1 -148793 sc-eQTL 6.30e-01 0.0372 0.0772 0.808 B_Naive LOneK1K
ENSG00000162510 MATN1 193613 sc-eQTL 4.03e-01 0.0621 0.0742 0.808 B_Naive LOneK1K
ENSG00000162511 LAPTM5 159424 sc-eQTL 9.18e-01 -0.0054 0.0523 0.808 B_Naive LOneK1K
ENSG00000162517 PEF1 -727698 sc-eQTL 3.92e-01 0.0817 0.0954 0.808 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 1.28e-01 0.103 0.0672 0.808 B_Naive LOneK1K
ENSG00000287510 AL137857.1 185505 sc-eQTL 7.76e-01 -0.0229 0.0803 0.808 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -379590 sc-eQTL 5.01e-01 -0.0582 0.0864 0.808 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 6.73e-01 0.0413 0.0979 0.808 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -148793 sc-eQTL 5.72e-01 -0.0354 0.0624 0.808 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 159424 sc-eQTL 8.11e-01 0.0131 0.0549 0.808 CD14_Mono LOneK1K
ENSG00000162512 SDC3 8440 sc-eQTL 7.10e-01 0.0416 0.112 0.808 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -727698 sc-eQTL 8.33e-01 0.0166 0.0787 0.808 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -492367 sc-eQTL 7.56e-01 -0.0358 0.115 0.808 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -589028 sc-eQTL 5.14e-01 -0.0616 0.0944 0.808 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 185505 sc-eQTL 1.08e-01 0.142 0.0879 0.808 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -379590 sc-eQTL 5.43e-01 0.0567 0.0931 0.806 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 5.58e-02 -0.194 0.101 0.806 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -148793 sc-eQTL 1.47e-01 -0.121 0.0831 0.806 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 159424 sc-eQTL 8.74e-01 -0.0107 0.0668 0.806 CD16_Mono LOneK1K
ENSG00000162512 SDC3 8440 sc-eQTL 4.27e-01 -0.0776 0.0974 0.806 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -727698 sc-eQTL 4.77e-01 0.0631 0.0886 0.806 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -492367 sc-eQTL 4.37e-01 0.0787 0.101 0.806 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -589028 sc-eQTL 6.63e-01 -0.042 0.096 0.806 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 185505 sc-eQTL 7.84e-01 -0.0264 0.0962 0.806 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -379590 sc-eQTL 5.04e-01 -0.0712 0.106 0.806 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -847695 sc-eQTL 3.53e-01 0.0844 0.0906 0.806 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -379784 sc-eQTL 6.66e-01 0.0314 0.0728 0.806 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -148793 sc-eQTL 5.21e-02 0.154 0.0791 0.806 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 159424 sc-eQTL 5.78e-02 0.169 0.0884 0.806 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -727698 sc-eQTL 3.28e-01 0.0662 0.0676 0.806 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 198694 sc-eQTL 6.18e-01 0.0513 0.103 0.806 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 185505 sc-eQTL 5.12e-01 -0.0582 0.0887 0.806 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -379590 eQTL 0.0165 0.0523 0.0218 0.0 0.0 0.171
ENSG00000121766 ZCCHC17 -379784 eQTL 1.99e-03 0.0708 0.0228 0.0 0.0 0.171
ENSG00000142910 TINAGL1 -659287 pQTL 0.00952 -0.052 0.02 0.00197 0.0 0.176
ENSG00000162512 SDC3 8440 eQTL 0.0169 -0.0759 0.0317 0.00146 0.00121 0.171
ENSG00000162517 PEF1 -727698 eQTL 0.0482 -0.0379 0.0192 0.0 0.0 0.171
ENSG00000168528 SERINC2 -492367 eQTL 0.011 -0.127 0.0497 0.0 0.0 0.171
ENSG00000237329 AL356320.2 -119536 eQTL 0.0419 0.0916 0.045 0.0 0.0 0.171

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina