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Genes within 1Mb (chr1:30915712:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -381076 sc-eQTL 5.42e-01 -0.047 0.077 0.585 B L1
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 9.98e-02 -0.101 0.0613 0.585 B L1
ENSG00000134644 PUM1 -150279 sc-eQTL 7.09e-02 0.0932 0.0513 0.585 B L1
ENSG00000162510 MATN1 192127 sc-eQTL 8.36e-01 0.0113 0.0544 0.585 B L1
ENSG00000162511 LAPTM5 157938 sc-eQTL 4.86e-01 0.0297 0.0426 0.585 B L1
ENSG00000162517 PEF1 -729184 sc-eQTL 4.51e-01 -0.0485 0.0642 0.585 B L1
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 4.48e-01 -0.0379 0.0499 0.585 B L1
ENSG00000287510 AL137857.1 184019 sc-eQTL 4.34e-01 0.0462 0.059 0.585 B L1
ENSG00000060688 SNRNP40 -381076 sc-eQTL 5.73e-01 0.0376 0.0666 0.585 CD4T L1
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 7.14e-01 -0.0191 0.0521 0.585 CD4T L1
ENSG00000134644 PUM1 -150279 sc-eQTL 2.76e-02 0.102 0.0458 0.585 CD4T L1
ENSG00000162511 LAPTM5 157938 sc-eQTL 2.28e-01 0.0619 0.0512 0.585 CD4T L1
ENSG00000162517 PEF1 -729184 sc-eQTL 9.56e-01 0.00294 0.0537 0.585 CD4T L1
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 2.35e-02 -0.104 0.0454 0.585 CD4T L1
ENSG00000287510 AL137857.1 184019 sc-eQTL 8.72e-01 -0.00888 0.0551 0.585 CD4T L1
ENSG00000060688 SNRNP40 -381076 sc-eQTL 9.24e-01 0.00839 0.0876 0.585 CD8T L1
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 9.35e-01 -0.00474 0.0583 0.585 CD8T L1
ENSG00000134644 PUM1 -150279 sc-eQTL 2.67e-02 0.113 0.0507 0.585 CD8T L1
ENSG00000162511 LAPTM5 157938 sc-eQTL 2.07e-02 0.115 0.0492 0.585 CD8T L1
ENSG00000162517 PEF1 -729184 sc-eQTL 3.55e-01 0.0568 0.0613 0.585 CD8T L1
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 3.21e-01 0.058 0.0583 0.585 CD8T L1
ENSG00000287510 AL137857.1 184019 sc-eQTL 7.08e-02 -0.132 0.0729 0.585 CD8T L1
ENSG00000060688 SNRNP40 -381076 sc-eQTL 2.58e-01 -0.0876 0.0772 0.59 DC L1
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 5.83e-01 -0.0504 0.0916 0.59 DC L1
ENSG00000134644 PUM1 -150279 sc-eQTL 8.04e-01 -0.0179 0.0718 0.59 DC L1
ENSG00000162511 LAPTM5 157938 sc-eQTL 4.85e-01 0.0358 0.0512 0.59 DC L1
ENSG00000162517 PEF1 -729184 sc-eQTL 8.59e-01 -0.0148 0.0832 0.59 DC L1
ENSG00000168528 SERINC2 -493853 sc-eQTL 2.90e-01 0.0895 0.0843 0.59 DC L1
ENSG00000284543 LINC01226 -590514 sc-eQTL 8.67e-01 -0.00938 0.056 0.59 DC L1
ENSG00000287510 AL137857.1 184019 sc-eQTL 9.41e-01 -0.00605 0.0811 0.59 DC L1
ENSG00000060688 SNRNP40 -381076 sc-eQTL 9.99e-01 4.89e-05 0.06 0.585 Mono L1
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 9.16e-01 -0.00781 0.0744 0.585 Mono L1
ENSG00000134644 PUM1 -150279 sc-eQTL 9.02e-01 -0.00589 0.0477 0.585 Mono L1
ENSG00000162511 LAPTM5 157938 sc-eQTL 5.75e-01 0.0246 0.0438 0.585 Mono L1
ENSG00000162512 SDC3 6954 sc-eQTL 3.68e-06 -0.381 0.0802 0.585 Mono L1
ENSG00000162517 PEF1 -729184 sc-eQTL 6.54e-01 -0.0265 0.0591 0.585 Mono L1
ENSG00000168528 SERINC2 -493853 sc-eQTL 5.00e-01 0.0611 0.0904 0.585 Mono L1
ENSG00000284543 LINC01226 -590514 sc-eQTL 3.68e-01 0.0717 0.0796 0.585 Mono L1
ENSG00000287510 AL137857.1 184019 sc-eQTL 4.85e-01 0.0487 0.0696 0.585 Mono L1
ENSG00000060688 SNRNP40 -381076 sc-eQTL 4.05e-01 0.0707 0.0847 0.586 NK L1
ENSG00000121753 ADGRB2 -849181 sc-eQTL 3.25e-01 0.0719 0.0728 0.586 NK L1
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 3.62e-02 -0.121 0.0574 0.586 NK L1
ENSG00000134644 PUM1 -150279 sc-eQTL 1.14e-01 0.0961 0.0605 0.586 NK L1
ENSG00000162511 LAPTM5 157938 sc-eQTL 7.79e-02 0.123 0.0696 0.586 NK L1
ENSG00000162517 PEF1 -729184 sc-eQTL 8.47e-01 0.0099 0.0512 0.586 NK L1
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 8.05e-01 0.0194 0.0787 0.586 NK L1
ENSG00000287510 AL137857.1 184019 sc-eQTL 9.40e-01 0.0055 0.0727 0.586 NK L1
ENSG00000060688 SNRNP40 -381076 sc-eQTL 8.38e-01 0.013 0.0634 0.585 Other_T L1
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 9.26e-02 -0.114 0.0674 0.585 Other_T L1
ENSG00000134644 PUM1 -150279 sc-eQTL 3.66e-02 0.127 0.0603 0.585 Other_T L1
ENSG00000162511 LAPTM5 157938 sc-eQTL 2.71e-01 0.055 0.0498 0.585 Other_T L1
ENSG00000162517 PEF1 -729184 sc-eQTL 5.32e-02 0.129 0.0661 0.585 Other_T L1
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 6.69e-01 -0.035 0.0818 0.585 Other_T L1
ENSG00000287510 AL137857.1 184019 sc-eQTL 9.81e-01 -0.00204 0.0852 0.585 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -381076 sc-eQTL 1.80e-01 0.137 0.102 0.587 B_Activated L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 4.56e-01 -0.0771 0.103 0.587 B_Activated L2
ENSG00000134644 PUM1 -150279 sc-eQTL 3.49e-01 -0.09 0.0958 0.587 B_Activated L2
ENSG00000162510 MATN1 192127 sc-eQTL 8.38e-01 -0.0171 0.0839 0.587 B_Activated L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 9.89e-01 -0.000831 0.0585 0.587 B_Activated L2
ENSG00000162517 PEF1 -729184 sc-eQTL 2.38e-01 -0.118 0.0992 0.587 B_Activated L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 4.26e-03 -0.267 0.0923 0.587 B_Activated L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 9.87e-01 -0.00136 0.0836 0.587 B_Activated L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 7.07e-01 -0.0361 0.096 0.588 B_Intermediate L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 4.27e-01 -0.0636 0.0799 0.588 B_Intermediate L2
ENSG00000134644 PUM1 -150279 sc-eQTL 7.35e-01 -0.0256 0.0754 0.588 B_Intermediate L2
ENSG00000162510 MATN1 192127 sc-eQTL 1.31e-02 -0.194 0.0774 0.588 B_Intermediate L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 9.18e-01 -0.00498 0.0482 0.588 B_Intermediate L2
ENSG00000162517 PEF1 -729184 sc-eQTL 7.38e-01 -0.03 0.0895 0.588 B_Intermediate L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 7.88e-01 0.0182 0.0676 0.588 B_Intermediate L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 8.64e-01 -0.013 0.0757 0.588 B_Intermediate L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 6.16e-01 0.0469 0.0933 0.586 B_Memory L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 2.94e-01 -0.0903 0.0858 0.586 B_Memory L2
ENSG00000134644 PUM1 -150279 sc-eQTL 1.29e-01 0.114 0.0745 0.586 B_Memory L2
ENSG00000162510 MATN1 192127 sc-eQTL 5.46e-01 0.0433 0.0716 0.586 B_Memory L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 8.63e-01 -0.011 0.0635 0.586 B_Memory L2
ENSG00000162517 PEF1 -729184 sc-eQTL 9.65e-01 -0.00371 0.0848 0.586 B_Memory L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 4.79e-01 -0.0514 0.0726 0.586 B_Memory L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 4.12e-01 0.0698 0.085 0.586 B_Memory L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 9.99e-01 -8.96e-05 0.0847 0.585 B_Naive1 L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 4.63e-01 -0.0537 0.0731 0.585 B_Naive1 L2
ENSG00000134644 PUM1 -150279 sc-eQTL 6.28e-02 0.12 0.064 0.585 B_Naive1 L2
ENSG00000162510 MATN1 192127 sc-eQTL 4.53e-01 0.0492 0.0654 0.585 B_Naive1 L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 2.80e-01 0.0473 0.0436 0.585 B_Naive1 L2
ENSG00000162517 PEF1 -729184 sc-eQTL 3.11e-01 0.0781 0.0769 0.585 B_Naive1 L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 7.44e-01 -0.0188 0.0574 0.585 B_Naive1 L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 9.72e-01 0.00253 0.071 0.585 B_Naive1 L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 6.31e-02 -0.167 0.0893 0.586 B_Naive2 L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 1.89e-01 -0.0976 0.0741 0.586 B_Naive2 L2
ENSG00000134644 PUM1 -150279 sc-eQTL 4.55e-01 0.0544 0.0727 0.586 B_Naive2 L2
ENSG00000162510 MATN1 192127 sc-eQTL 7.52e-01 -0.0221 0.0699 0.586 B_Naive2 L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 7.94e-01 0.0124 0.0474 0.586 B_Naive2 L2
ENSG00000162517 PEF1 -729184 sc-eQTL 7.19e-02 -0.155 0.0857 0.586 B_Naive2 L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 6.31e-01 0.0332 0.0691 0.586 B_Naive2 L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 1.36e-01 0.111 0.0742 0.586 B_Naive2 L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 5.18e-01 0.0588 0.0907 0.577 CD4_CTL L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 1.44e-01 0.13 0.0888 0.577 CD4_CTL L2
ENSG00000134644 PUM1 -150279 sc-eQTL 9.91e-01 -0.00101 0.0876 0.577 CD4_CTL L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 5.86e-01 0.0425 0.078 0.577 CD4_CTL L2
ENSG00000162517 PEF1 -729184 sc-eQTL 9.45e-01 -0.00551 0.08 0.577 CD4_CTL L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 9.47e-03 -0.22 0.0839 0.577 CD4_CTL L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 8.99e-01 0.00959 0.0754 0.577 CD4_CTL L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 8.20e-01 -0.0159 0.07 0.585 CD4_Naive L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 8.61e-01 -0.0109 0.0621 0.585 CD4_Naive L2
ENSG00000134644 PUM1 -150279 sc-eQTL 1.51e-01 0.0712 0.0493 0.585 CD4_Naive L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 3.60e-01 0.0486 0.053 0.585 CD4_Naive L2
ENSG00000162517 PEF1 -729184 sc-eQTL 6.52e-01 -0.0263 0.0582 0.585 CD4_Naive L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 1.23e-02 -0.134 0.0531 0.585 CD4_Naive L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 9.35e-01 -0.00503 0.0619 0.585 CD4_Naive L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 3.25e-01 0.0858 0.0869 0.585 CD4_TCM L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 1.44e-01 0.102 0.0699 0.585 CD4_TCM L2
ENSG00000134644 PUM1 -150279 sc-eQTL 1.41e-02 0.152 0.0613 0.585 CD4_TCM L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 2.05e-01 0.0653 0.0514 0.585 CD4_TCM L2
ENSG00000162517 PEF1 -729184 sc-eQTL 4.25e-01 0.0552 0.069 0.585 CD4_TCM L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 8.04e-01 -0.0162 0.0654 0.585 CD4_TCM L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 7.17e-01 0.0264 0.0729 0.585 CD4_TCM L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 4.97e-02 0.171 0.0868 0.585 CD4_TEM L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 3.82e-01 -0.0729 0.0833 0.585 CD4_TEM L2
ENSG00000134644 PUM1 -150279 sc-eQTL 5.19e-02 0.135 0.0689 0.585 CD4_TEM L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 2.46e-01 0.0816 0.0701 0.585 CD4_TEM L2
ENSG00000162517 PEF1 -729184 sc-eQTL 7.33e-01 0.0269 0.0787 0.585 CD4_TEM L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 9.20e-01 -0.00829 0.0822 0.585 CD4_TEM L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 7.88e-01 0.0218 0.081 0.585 CD4_TEM L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 8.99e-01 0.0122 0.0956 0.585 CD8_CTL L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 1.36e-01 0.109 0.0729 0.585 CD8_CTL L2
ENSG00000134644 PUM1 -150279 sc-eQTL 8.66e-02 0.122 0.0707 0.585 CD8_CTL L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 7.27e-04 0.263 0.0767 0.585 CD8_CTL L2
ENSG00000162517 PEF1 -729184 sc-eQTL 8.80e-01 0.0104 0.0686 0.585 CD8_CTL L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 7.83e-01 -0.0229 0.0828 0.585 CD8_CTL L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 2.95e-01 -0.0815 0.0777 0.585 CD8_CTL L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 7.68e-01 0.0256 0.0868 0.585 CD8_Naive L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 7.40e-01 -0.0248 0.0748 0.585 CD8_Naive L2
ENSG00000134644 PUM1 -150279 sc-eQTL 3.16e-01 0.0604 0.0601 0.585 CD8_Naive L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 4.12e-02 0.117 0.0571 0.585 CD8_Naive L2
ENSG00000162517 PEF1 -729184 sc-eQTL 5.77e-01 0.0448 0.0802 0.585 CD8_Naive L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 9.03e-01 0.0088 0.072 0.585 CD8_Naive L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 5.26e-01 -0.0498 0.0783 0.585 CD8_Naive L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 4.82e-01 -0.0705 0.1 0.579 CD8_TCM L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 4.34e-01 -0.0719 0.0917 0.579 CD8_TCM L2
ENSG00000134644 PUM1 -150279 sc-eQTL 5.27e-01 0.0547 0.0863 0.579 CD8_TCM L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 1.56e-01 0.128 0.0899 0.579 CD8_TCM L2
ENSG00000162517 PEF1 -729184 sc-eQTL 2.52e-01 0.106 0.0921 0.579 CD8_TCM L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 4.87e-01 0.0582 0.0836 0.579 CD8_TCM L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 4.82e-01 0.0594 0.0845 0.579 CD8_TCM L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 3.08e-01 0.0926 0.0906 0.584 CD8_TEM L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 7.92e-02 -0.152 0.0864 0.584 CD8_TEM L2
ENSG00000134644 PUM1 -150279 sc-eQTL 2.72e-01 0.0978 0.0888 0.584 CD8_TEM L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 9.81e-02 0.138 0.0831 0.584 CD8_TEM L2
ENSG00000162517 PEF1 -729184 sc-eQTL 9.54e-01 -0.00459 0.0788 0.584 CD8_TEM L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 8.12e-01 -0.0206 0.0869 0.584 CD8_TEM L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 7.20e-02 -0.141 0.078 0.584 CD8_TEM L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 1.78e-01 -0.127 0.0936 0.58 MAIT L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 2.60e-01 -0.0939 0.0831 0.58 MAIT L2
ENSG00000134644 PUM1 -150279 sc-eQTL 1.47e-02 0.194 0.0787 0.58 MAIT L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 3.05e-01 0.0772 0.0752 0.58 MAIT L2
ENSG00000162517 PEF1 -729184 sc-eQTL 8.40e-01 0.0168 0.0828 0.58 MAIT L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 9.49e-01 -0.00536 0.0839 0.58 MAIT L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 6.46e-01 0.0398 0.0864 0.58 MAIT L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 2.83e-01 0.102 0.095 0.589 NK_CD56bright L2
ENSG00000121753 ADGRB2 -849181 sc-eQTL 2.28e-01 -0.0898 0.0743 0.589 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 4.84e-02 -0.158 0.0797 0.589 NK_CD56bright L2
ENSG00000134644 PUM1 -150279 sc-eQTL 9.15e-01 0.00902 0.0845 0.589 NK_CD56bright L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 2.64e-01 0.0932 0.0831 0.589 NK_CD56bright L2
ENSG00000162517 PEF1 -729184 sc-eQTL 6.13e-01 0.041 0.0809 0.589 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 1.00e+00 2e-05 0.0838 0.589 NK_CD56bright L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 4.12e-01 -0.0678 0.0824 0.589 NK_CD56bright L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 9.10e-02 0.15 0.0883 0.586 NK_CD56dim L2
ENSG00000121753 ADGRB2 -849181 sc-eQTL 1.11e-01 0.124 0.0777 0.586 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 1.61e-01 -0.092 0.0654 0.586 NK_CD56dim L2
ENSG00000134644 PUM1 -150279 sc-eQTL 3.29e-01 0.0658 0.0673 0.586 NK_CD56dim L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 3.17e-01 0.0719 0.0717 0.586 NK_CD56dim L2
ENSG00000162517 PEF1 -729184 sc-eQTL 7.39e-01 0.0213 0.064 0.586 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 8.87e-01 -0.0128 0.0901 0.586 NK_CD56dim L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 3.84e-01 -0.0647 0.0742 0.586 NK_CD56dim L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 4.17e-01 0.0771 0.0947 0.58 NK_HLA L2
ENSG00000121753 ADGRB2 -849181 sc-eQTL 5.15e-01 0.0491 0.0752 0.58 NK_HLA L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 9.78e-01 0.00234 0.0847 0.58 NK_HLA L2
ENSG00000134644 PUM1 -150279 sc-eQTL 3.50e-01 0.0772 0.0823 0.58 NK_HLA L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 1.18e-01 0.123 0.0783 0.58 NK_HLA L2
ENSG00000162517 PEF1 -729184 sc-eQTL 3.61e-02 -0.185 0.0878 0.58 NK_HLA L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 1.53e-01 0.12 0.0834 0.58 NK_HLA L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 1.18e-01 0.126 0.0805 0.58 NK_HLA L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 4.46e-01 -0.066 0.0865 0.586 NK_cytokine L2
ENSG00000121753 ADGRB2 -849181 sc-eQTL 8.49e-01 0.0149 0.0782 0.586 NK_cytokine L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 4.15e-01 -0.055 0.0675 0.586 NK_cytokine L2
ENSG00000134644 PUM1 -150279 sc-eQTL 2.20e-01 0.0896 0.0728 0.586 NK_cytokine L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 2.14e-02 0.184 0.0794 0.586 NK_cytokine L2
ENSG00000162517 PEF1 -729184 sc-eQTL 3.63e-01 0.0624 0.0684 0.586 NK_cytokine L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 5.22e-01 0.0546 0.0852 0.586 NK_cytokine L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 4.10e-02 0.162 0.0785 0.586 NK_cytokine L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 2.03e-01 -0.13 0.101 0.578 PB L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 8.71e-01 -0.0192 0.119 0.578 PB L2
ENSG00000134644 PUM1 -150279 sc-eQTL 5.82e-01 0.0567 0.103 0.578 PB L2
ENSG00000162510 MATN1 192127 sc-eQTL 2.35e-01 -0.114 0.0954 0.578 PB L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 1.54e-01 0.0975 0.068 0.578 PB L2
ENSG00000162517 PEF1 -729184 sc-eQTL 1.95e-01 -0.137 0.105 0.578 PB L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 2.41e-01 -0.11 0.0933 0.578 PB L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 1.56e-01 -0.141 0.099 0.578 PB L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 1.30e-01 0.103 0.0678 0.585 Pro_T L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 1.51e-02 -0.209 0.0853 0.585 Pro_T L2
ENSG00000134644 PUM1 -150279 sc-eQTL 4.64e-01 0.0591 0.0806 0.585 Pro_T L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 4.08e-01 -0.0479 0.0578 0.585 Pro_T L2
ENSG00000162517 PEF1 -729184 sc-eQTL 2.55e-02 -0.189 0.0839 0.585 Pro_T L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 4.37e-01 -0.063 0.0808 0.585 Pro_T L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 7.73e-01 -0.0214 0.0744 0.585 Pro_T L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 9.16e-01 0.00956 0.0902 0.585 Treg L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 8.60e-01 0.0154 0.0873 0.585 Treg L2
ENSG00000134644 PUM1 -150279 sc-eQTL 4.61e-01 -0.0515 0.0698 0.585 Treg L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 6.58e-02 0.147 0.0793 0.585 Treg L2
ENSG00000162517 PEF1 -729184 sc-eQTL 7.34e-01 -0.0294 0.0864 0.585 Treg L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 3.44e-01 0.0771 0.0813 0.585 Treg L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 1.89e-01 -0.107 0.0811 0.585 Treg L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 1.23e-01 -0.139 0.0899 0.6 cDC L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 2.55e-01 -0.111 0.0976 0.6 cDC L2
ENSG00000134644 PUM1 -150279 sc-eQTL 3.91e-01 0.0722 0.084 0.6 cDC L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 6.48e-01 -0.027 0.0589 0.6 cDC L2
ENSG00000162517 PEF1 -729184 sc-eQTL 6.49e-01 0.0389 0.0854 0.6 cDC L2
ENSG00000168528 SERINC2 -493853 sc-eQTL 9.74e-01 -0.0025 0.0757 0.6 cDC L2
ENSG00000284543 LINC01226 -590514 sc-eQTL 4.61e-02 -0.148 0.0736 0.6 cDC L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 6.66e-01 0.0346 0.0801 0.6 cDC L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 5.25e-01 -0.0459 0.072 0.585 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 2.21e-01 -0.0984 0.0801 0.585 cMono_IL1B L2
ENSG00000134644 PUM1 -150279 sc-eQTL 9.25e-01 -0.00511 0.0544 0.585 cMono_IL1B L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 2.68e-01 0.0529 0.0476 0.585 cMono_IL1B L2
ENSG00000162512 SDC3 6954 sc-eQTL 6.07e-04 -0.304 0.0875 0.585 cMono_IL1B L2
ENSG00000162517 PEF1 -729184 sc-eQTL 5.73e-01 -0.0415 0.0734 0.585 cMono_IL1B L2
ENSG00000168528 SERINC2 -493853 sc-eQTL 5.84e-01 0.05 0.091 0.585 cMono_IL1B L2
ENSG00000284543 LINC01226 -590514 sc-eQTL 2.46e-01 0.0934 0.0802 0.585 cMono_IL1B L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 3.91e-01 0.0645 0.0749 0.585 cMono_IL1B L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 1.34e-01 0.113 0.0753 0.585 cMono_S100A L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 7.79e-02 0.157 0.0888 0.585 cMono_S100A L2
ENSG00000134644 PUM1 -150279 sc-eQTL 9.18e-01 -0.00664 0.0646 0.585 cMono_S100A L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 9.77e-01 -0.00145 0.0497 0.585 cMono_S100A L2
ENSG00000162512 SDC3 6954 sc-eQTL 3.43e-03 -0.249 0.0841 0.585 cMono_S100A L2
ENSG00000162517 PEF1 -729184 sc-eQTL 3.18e-01 -0.0774 0.0773 0.585 cMono_S100A L2
ENSG00000168528 SERINC2 -493853 sc-eQTL 5.39e-01 0.0559 0.0908 0.585 cMono_S100A L2
ENSG00000284543 LINC01226 -590514 sc-eQTL 8.47e-01 0.0143 0.0738 0.585 cMono_S100A L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 9.51e-01 -0.00456 0.0741 0.585 cMono_S100A L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 6.78e-01 -0.0468 0.113 0.579 gdT L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 5.13e-01 0.0632 0.0965 0.579 gdT L2
ENSG00000134644 PUM1 -150279 sc-eQTL 2.87e-01 -0.106 0.0993 0.579 gdT L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 2.93e-01 0.114 0.108 0.579 gdT L2
ENSG00000162517 PEF1 -729184 sc-eQTL 1.29e-02 0.244 0.097 0.579 gdT L2
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 2.07e-01 -0.126 0.0994 0.579 gdT L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 2.83e-02 -0.211 0.0952 0.579 gdT L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 9.42e-01 0.00619 0.085 0.591 intMono L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 7.11e-01 0.034 0.0914 0.591 intMono L2
ENSG00000134644 PUM1 -150279 sc-eQTL 4.79e-01 0.055 0.0775 0.591 intMono L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 1.14e-01 0.096 0.0605 0.591 intMono L2
ENSG00000162512 SDC3 6954 sc-eQTL 7.47e-03 -0.221 0.0819 0.591 intMono L2
ENSG00000162517 PEF1 -729184 sc-eQTL 7.79e-01 0.0245 0.0875 0.591 intMono L2
ENSG00000168528 SERINC2 -493853 sc-eQTL 6.57e-01 0.0388 0.0872 0.591 intMono L2
ENSG00000284543 LINC01226 -590514 sc-eQTL 3.94e-01 -0.0704 0.0825 0.591 intMono L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 6.75e-01 -0.0347 0.0826 0.591 intMono L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 6.64e-01 0.0345 0.0793 0.584 ncMono L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 7.21e-01 -0.0302 0.0845 0.584 ncMono L2
ENSG00000134644 PUM1 -150279 sc-eQTL 8.68e-01 0.0115 0.0691 0.584 ncMono L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 3.17e-02 0.134 0.062 0.584 ncMono L2
ENSG00000162512 SDC3 6954 sc-eQTL 3.51e-03 -0.203 0.0688 0.584 ncMono L2
ENSG00000162517 PEF1 -729184 sc-eQTL 8.44e-01 -0.0159 0.0807 0.584 ncMono L2
ENSG00000168528 SERINC2 -493853 sc-eQTL 9.93e-01 0.000665 0.0768 0.584 ncMono L2
ENSG00000284543 LINC01226 -590514 sc-eQTL 4.73e-01 0.0551 0.0766 0.584 ncMono L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 9.15e-01 0.00855 0.0795 0.584 ncMono L2
ENSG00000060688 SNRNP40 -381076 sc-eQTL 4.79e-01 -0.0654 0.0922 0.59 pDC L2
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 9.82e-01 0.00232 0.101 0.59 pDC L2
ENSG00000134644 PUM1 -150279 sc-eQTL 4.88e-01 0.0583 0.0839 0.59 pDC L2
ENSG00000162511 LAPTM5 157938 sc-eQTL 2.88e-01 0.083 0.0778 0.59 pDC L2
ENSG00000162517 PEF1 -729184 sc-eQTL 2.65e-01 -0.113 0.101 0.59 pDC L2
ENSG00000168528 SERINC2 -493853 sc-eQTL 9.58e-02 0.157 0.0939 0.59 pDC L2
ENSG00000284543 LINC01226 -590514 sc-eQTL 9.96e-01 -0.000388 0.0735 0.59 pDC L2
ENSG00000287510 AL137857.1 184019 sc-eQTL 5.31e-01 0.0542 0.0864 0.59 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -381076 sc-eQTL 8.04e-01 0.0229 0.092 0.585 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 1.23e-01 -0.118 0.0761 0.585 B_Memory LOneK1K
ENSG00000134644 PUM1 -150279 sc-eQTL 6.15e-01 0.0341 0.0678 0.585 B_Memory LOneK1K
ENSG00000162510 MATN1 192127 sc-eQTL 4.16e-01 -0.0629 0.0772 0.585 B_Memory LOneK1K
ENSG00000162511 LAPTM5 157938 sc-eQTL 3.63e-01 -0.0442 0.0485 0.585 B_Memory LOneK1K
ENSG00000162517 PEF1 -729184 sc-eQTL 9.47e-01 0.00536 0.0805 0.585 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 1.43e-01 -0.0941 0.0639 0.585 B_Memory LOneK1K
ENSG00000287510 AL137857.1 184019 sc-eQTL 8.37e-01 -0.0144 0.07 0.585 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -381076 sc-eQTL 2.70e-01 -0.0905 0.0819 0.585 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 3.31e-01 -0.0631 0.0648 0.585 B_Naive LOneK1K
ENSG00000134644 PUM1 -150279 sc-eQTL 5.31e-02 0.118 0.0609 0.585 B_Naive LOneK1K
ENSG00000162510 MATN1 192127 sc-eQTL 6.21e-01 0.0293 0.0591 0.585 B_Naive LOneK1K
ENSG00000162511 LAPTM5 157938 sc-eQTL 2.78e-01 0.0451 0.0415 0.585 B_Naive LOneK1K
ENSG00000162517 PEF1 -729184 sc-eQTL 9.69e-01 -0.00294 0.076 0.585 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 7.71e-01 -0.0156 0.0538 0.585 B_Naive LOneK1K
ENSG00000287510 AL137857.1 184019 sc-eQTL 2.54e-01 0.0728 0.0637 0.585 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -381076 sc-eQTL 6.78e-01 0.0285 0.0685 0.585 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 8.82e-01 0.0115 0.0776 0.585 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -150279 sc-eQTL 8.21e-01 -0.0112 0.0495 0.585 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 157938 sc-eQTL 8.96e-01 0.00571 0.0435 0.585 CD14_Mono LOneK1K
ENSG00000162512 SDC3 6954 sc-eQTL 1.84e-05 -0.372 0.085 0.585 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -729184 sc-eQTL 4.28e-01 -0.0495 0.0623 0.585 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -493853 sc-eQTL 5.69e-01 0.052 0.0912 0.585 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -590514 sc-eQTL 2.12e-01 0.0933 0.0746 0.585 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 184019 sc-eQTL 6.63e-01 0.0306 0.07 0.585 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -381076 sc-eQTL 7.72e-01 0.0217 0.0748 0.586 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 5.66e-01 -0.047 0.0818 0.586 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -150279 sc-eQTL 8.39e-01 -0.0137 0.0671 0.586 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 157938 sc-eQTL 9.91e-02 0.0883 0.0533 0.586 CD16_Mono LOneK1K
ENSG00000162512 SDC3 6954 sc-eQTL 5.16e-03 -0.217 0.0769 0.586 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -729184 sc-eQTL 8.08e-01 0.0173 0.0712 0.586 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -493853 sc-eQTL 6.05e-01 0.042 0.0812 0.586 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -590514 sc-eQTL 6.72e-01 0.0327 0.0771 0.586 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 184019 sc-eQTL 8.91e-01 0.0106 0.0772 0.586 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -381076 sc-eQTL 4.67e-01 0.0614 0.0843 0.586 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -849181 sc-eQTL 2.11e-01 0.0899 0.0716 0.586 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -381270 sc-eQTL 1.38e-01 -0.0853 0.0574 0.586 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -150279 sc-eQTL 9.94e-02 0.104 0.0628 0.586 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 157938 sc-eQTL 1.73e-01 0.0961 0.0703 0.586 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -729184 sc-eQTL 6.04e-01 0.0278 0.0536 0.586 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 197208 sc-eQTL 6.68e-01 0.035 0.0814 0.586 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 184019 sc-eQTL 6.04e-01 0.0364 0.0702 0.586 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -381270 eQTL 1.70e-02 0.0426 0.0178 0.0 0.0 0.435
ENSG00000162512 SDC3 6954 eQTL 7.41e-19 -0.215 0.0238 0.0 0.0 0.435
ENSG00000237329 AL356320.2 -121022 eQTL 0.00363 0.102 0.035 0.00216 0.00133 0.435

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162512 SDC3 6954 3.49e-05 3.29e-05 6.39e-06 1.61e-05 6.41e-06 1.67e-05 4.44e-05 5.66e-06 3.31e-05 1.71e-05 4.26e-05 1.94e-05 5.31e-05 1.46e-05 7.47e-06 2.07e-05 1.96e-05 2.74e-05 8.82e-06 7.59e-06 1.86e-05 3.5e-05 3.27e-05 1.03e-05 4.81e-05 9.01e-06 1.62e-05 1.46e-05 3.19e-05 2.81e-05 2.34e-05 1.71e-06 3.37e-06 8.04e-06 1.3e-05 6.64e-06 3.71e-06 3.52e-06 5.92e-06 3.85e-06 1.87e-06 3.89e-05 3.98e-06 4.21e-07 2.81e-06 4.93e-06 4.82e-06 2.18e-06 1.54e-06
ENSG00000237329 AL356320.2 -121022 3.62e-06 2.75e-06 2.59e-07 1.85e-06 4.69e-07 7.26e-07 1.82e-06 6.18e-07 1.76e-06 8.46e-07 2.52e-06 1.28e-06 3.68e-06 1.38e-06 8.13e-07 1.51e-06 1.17e-06 2.3e-06 9.86e-07 1.16e-06 1.1e-06 2.95e-06 2.33e-06 1.08e-06 3.92e-06 1.36e-06 1.29e-06 1.46e-06 1.91e-06 2.37e-06 1.81e-06 2.66e-07 5.72e-07 1.25e-06 1.35e-06 9.73e-07 7.7e-07 4.13e-07 9.37e-07 3.55e-07 3.55e-07 3.42e-06 5.57e-07 1.89e-07 3.67e-07 3.62e-07 7.57e-07 2.3e-07 2.79e-07
ENSG00000284543 \N -590569 2.76e-07 1.35e-07 3.88e-08 1.97e-07 9.25e-08 8.45e-08 1.61e-07 5.48e-08 1.45e-07 4.94e-08 1.55e-07 9.19e-08 1.52e-07 6.76e-08 6.04e-08 7.36e-08 4.01e-08 1.27e-07 6.07e-08 4.21e-08 1.21e-07 1.24e-07 1.45e-07 2.64e-08 1.55e-07 1.25e-07 1.07e-07 9.74e-08 1.12e-07 9.49e-08 9.92e-08 3.64e-08 3.51e-08 8.23e-08 4.92e-08 3.28e-08 4.62e-08 8.63e-08 6.86e-08 4.19e-08 5.14e-08 1.46e-07 5.2e-08 7.18e-09 5.19e-08 1.83e-08 1.18e-07 1.88e-09 5.01e-08