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Genes within 1Mb (chr1:30914871:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -381917 sc-eQTL 7.31e-01 -0.0393 0.114 0.87 B L1
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 6.43e-02 -0.169 0.0907 0.87 B L1
ENSG00000134644 PUM1 -151120 sc-eQTL 9.49e-01 -0.0049 0.0767 0.87 B L1
ENSG00000162510 MATN1 191286 sc-eQTL 1.98e-01 0.104 0.0804 0.87 B L1
ENSG00000162511 LAPTM5 157097 sc-eQTL 3.41e-01 0.0602 0.063 0.87 B L1
ENSG00000162517 PEF1 -730025 sc-eQTL 5.53e-01 -0.0566 0.0953 0.87 B L1
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 4.17e-01 0.0601 0.0739 0.87 B L1
ENSG00000287510 AL137857.1 183178 sc-eQTL 4.34e-01 -0.0686 0.0875 0.87 B L1
ENSG00000060688 SNRNP40 -381917 sc-eQTL 5.77e-01 -0.054 0.0967 0.87 CD4T L1
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 3.51e-01 0.0706 0.0755 0.87 CD4T L1
ENSG00000134644 PUM1 -151120 sc-eQTL 4.64e-02 0.134 0.0667 0.87 CD4T L1
ENSG00000162511 LAPTM5 157097 sc-eQTL 7.81e-01 -0.0208 0.0746 0.87 CD4T L1
ENSG00000162517 PEF1 -730025 sc-eQTL 3.52e-01 -0.0726 0.0779 0.87 CD4T L1
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 5.31e-01 -0.0418 0.0667 0.87 CD4T L1
ENSG00000287510 AL137857.1 183178 sc-eQTL 4.32e-01 -0.0629 0.0798 0.87 CD4T L1
ENSG00000060688 SNRNP40 -381917 sc-eQTL 5.91e-01 -0.0687 0.127 0.87 CD8T L1
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 5.94e-01 0.0453 0.0848 0.87 CD8T L1
ENSG00000134644 PUM1 -151120 sc-eQTL 1.71e-01 0.102 0.0744 0.87 CD8T L1
ENSG00000162511 LAPTM5 157097 sc-eQTL 4.47e-01 0.0552 0.0725 0.87 CD8T L1
ENSG00000162517 PEF1 -730025 sc-eQTL 6.40e-01 -0.0418 0.0894 0.87 CD8T L1
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 6.14e-01 0.0429 0.085 0.87 CD8T L1
ENSG00000287510 AL137857.1 183178 sc-eQTL 7.92e-01 -0.0283 0.107 0.87 CD8T L1
ENSG00000060688 SNRNP40 -381917 sc-eQTL 6.89e-01 -0.0453 0.113 0.865 DC L1
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 8.04e-01 -0.0332 0.134 0.865 DC L1
ENSG00000134644 PUM1 -151120 sc-eQTL 3.56e-01 -0.0968 0.105 0.865 DC L1
ENSG00000162511 LAPTM5 157097 sc-eQTL 7.79e-01 0.021 0.0748 0.865 DC L1
ENSG00000162517 PEF1 -730025 sc-eQTL 8.79e-01 0.0184 0.121 0.865 DC L1
ENSG00000168528 SERINC2 -494694 sc-eQTL 2.53e-01 0.141 0.123 0.865 DC L1
ENSG00000284543 LINC01226 -591355 sc-eQTL 6.52e-01 0.0369 0.0817 0.865 DC L1
ENSG00000287510 AL137857.1 183178 sc-eQTL 6.75e-01 0.0496 0.118 0.865 DC L1
ENSG00000060688 SNRNP40 -381917 sc-eQTL 7.30e-01 0.0302 0.0874 0.87 Mono L1
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 9.44e-01 0.00756 0.108 0.87 Mono L1
ENSG00000134644 PUM1 -151120 sc-eQTL 2.46e-01 -0.0806 0.0692 0.87 Mono L1
ENSG00000162511 LAPTM5 157097 sc-eQTL 9.12e-01 0.0071 0.0639 0.87 Mono L1
ENSG00000162512 SDC3 6113 sc-eQTL 2.50e-03 -0.368 0.12 0.87 Mono L1
ENSG00000162517 PEF1 -730025 sc-eQTL 7.89e-01 -0.0231 0.0861 0.87 Mono L1
ENSG00000168528 SERINC2 -494694 sc-eQTL 9.58e-01 0.00701 0.132 0.87 Mono L1
ENSG00000284543 LINC01226 -591355 sc-eQTL 2.67e-01 -0.129 0.116 0.87 Mono L1
ENSG00000287510 AL137857.1 183178 sc-eQTL 8.87e-01 -0.0144 0.101 0.87 Mono L1
ENSG00000060688 SNRNP40 -381917 sc-eQTL 3.05e-02 -0.264 0.121 0.869 NK L1
ENSG00000121753 ADGRB2 -850022 sc-eQTL 4.48e-01 0.0802 0.106 0.869 NK L1
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 8.21e-01 0.0191 0.084 0.869 NK L1
ENSG00000134644 PUM1 -151120 sc-eQTL 6.72e-01 0.0373 0.0881 0.869 NK L1
ENSG00000162511 LAPTM5 157097 sc-eQTL 8.57e-03 0.265 0.0998 0.869 NK L1
ENSG00000162517 PEF1 -730025 sc-eQTL 8.63e-01 0.0128 0.074 0.869 NK L1
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 3.98e-01 0.0963 0.114 0.869 NK L1
ENSG00000287510 AL137857.1 183178 sc-eQTL 2.31e-01 -0.126 0.105 0.869 NK L1
ENSG00000060688 SNRNP40 -381917 sc-eQTL 6.33e-01 -0.0444 0.0929 0.87 Other_T L1
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 7.85e-01 -0.0271 0.0993 0.87 Other_T L1
ENSG00000134644 PUM1 -151120 sc-eQTL 2.03e-01 0.114 0.089 0.87 Other_T L1
ENSG00000162511 LAPTM5 157097 sc-eQTL 8.71e-01 0.0119 0.0732 0.87 Other_T L1
ENSG00000162517 PEF1 -730025 sc-eQTL 1.49e-01 0.141 0.0973 0.87 Other_T L1
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 8.43e-01 0.0238 0.12 0.87 Other_T L1
ENSG00000287510 AL137857.1 183178 sc-eQTL 8.71e-01 -0.0203 0.125 0.87 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -381917 sc-eQTL 9.03e-01 -0.0183 0.15 0.872 B_Activated L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 6.85e-01 -0.0616 0.151 0.872 B_Activated L2
ENSG00000134644 PUM1 -151120 sc-eQTL 7.34e-01 -0.048 0.141 0.872 B_Activated L2
ENSG00000162510 MATN1 191286 sc-eQTL 3.08e-01 -0.125 0.123 0.872 B_Activated L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 2.10e-01 -0.107 0.0855 0.872 B_Activated L2
ENSG00000162517 PEF1 -730025 sc-eQTL 7.70e-01 -0.0428 0.146 0.872 B_Activated L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 8.52e-05 -0.533 0.133 0.872 B_Activated L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 1.55e-01 -0.174 0.122 0.872 B_Activated L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 3.47e-01 -0.13 0.138 0.869 B_Intermediate L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 9.42e-01 -0.00836 0.116 0.869 B_Intermediate L2
ENSG00000134644 PUM1 -151120 sc-eQTL 2.12e-01 -0.136 0.109 0.869 B_Intermediate L2
ENSG00000162510 MATN1 191286 sc-eQTL 5.16e-01 -0.0737 0.113 0.869 B_Intermediate L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 7.42e-01 0.023 0.0696 0.869 B_Intermediate L2
ENSG00000162517 PEF1 -730025 sc-eQTL 1.80e-01 -0.173 0.129 0.869 B_Intermediate L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 8.01e-01 0.0246 0.0977 0.869 B_Intermediate L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 5.07e-01 -0.0726 0.109 0.869 B_Intermediate L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 4.46e-01 0.102 0.133 0.869 B_Memory L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 3.64e-01 -0.112 0.123 0.869 B_Memory L2
ENSG00000134644 PUM1 -151120 sc-eQTL 9.47e-01 0.00718 0.107 0.869 B_Memory L2
ENSG00000162510 MATN1 191286 sc-eQTL 5.55e-01 0.0605 0.102 0.869 B_Memory L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 1.94e-01 0.118 0.0903 0.869 B_Memory L2
ENSG00000162517 PEF1 -730025 sc-eQTL 5.89e-01 -0.0655 0.121 0.869 B_Memory L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 4.48e-03 -0.292 0.102 0.869 B_Memory L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 4.45e-01 0.0928 0.121 0.869 B_Memory L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 3.11e-01 -0.125 0.123 0.87 B_Naive1 L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 6.40e-01 -0.0499 0.106 0.87 B_Naive1 L2
ENSG00000134644 PUM1 -151120 sc-eQTL 8.97e-01 -0.0121 0.094 0.87 B_Naive1 L2
ENSG00000162510 MATN1 191286 sc-eQTL 2.42e-01 0.111 0.095 0.87 B_Naive1 L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 7.05e-01 0.0241 0.0637 0.87 B_Naive1 L2
ENSG00000162517 PEF1 -730025 sc-eQTL 2.31e-01 0.134 0.112 0.87 B_Naive1 L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 1.45e-01 0.122 0.0832 0.87 B_Naive1 L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 5.87e-01 -0.0562 0.103 0.87 B_Naive1 L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 8.04e-01 0.0324 0.13 0.869 B_Naive2 L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 4.05e-01 -0.0898 0.108 0.869 B_Naive2 L2
ENSG00000134644 PUM1 -151120 sc-eQTL 4.16e-01 0.0858 0.105 0.869 B_Naive2 L2
ENSG00000162510 MATN1 191286 sc-eQTL 2.10e-01 -0.127 0.101 0.869 B_Naive2 L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 7.21e-01 -0.0246 0.0687 0.869 B_Naive2 L2
ENSG00000162517 PEF1 -730025 sc-eQTL 5.83e-01 -0.0688 0.125 0.869 B_Naive2 L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 9.12e-01 0.0111 0.1 0.869 B_Naive2 L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 6.20e-01 -0.0537 0.108 0.869 B_Naive2 L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 6.69e-01 0.0567 0.132 0.866 CD4_CTL L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 3.24e-01 0.129 0.13 0.866 CD4_CTL L2
ENSG00000134644 PUM1 -151120 sc-eQTL 8.67e-01 0.0214 0.128 0.866 CD4_CTL L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 8.55e-01 -0.0209 0.114 0.866 CD4_CTL L2
ENSG00000162517 PEF1 -730025 sc-eQTL 9.64e-01 0.00535 0.117 0.866 CD4_CTL L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 8.06e-01 0.0307 0.125 0.866 CD4_CTL L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 8.40e-01 -0.0222 0.11 0.866 CD4_CTL L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 1.99e-01 -0.131 0.101 0.87 CD4_Naive L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 1.99e-01 0.116 0.0899 0.87 CD4_Naive L2
ENSG00000134644 PUM1 -151120 sc-eQTL 2.95e-02 0.156 0.0713 0.87 CD4_Naive L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 3.45e-01 -0.073 0.0771 0.87 CD4_Naive L2
ENSG00000162517 PEF1 -730025 sc-eQTL 1.13e-01 -0.134 0.0842 0.87 CD4_Naive L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 4.29e-01 -0.0621 0.0783 0.87 CD4_Naive L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 7.38e-01 -0.0301 0.09 0.87 CD4_Naive L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 3.27e-01 0.125 0.127 0.87 CD4_TCM L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 1.52e-01 0.147 0.102 0.87 CD4_TCM L2
ENSG00000134644 PUM1 -151120 sc-eQTL 5.75e-01 0.0511 0.0909 0.87 CD4_TCM L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 3.71e-01 0.0675 0.0753 0.87 CD4_TCM L2
ENSG00000162517 PEF1 -730025 sc-eQTL 6.12e-01 0.0514 0.101 0.87 CD4_TCM L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 1.12e-01 0.152 0.0952 0.87 CD4_TCM L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 1.76e-01 -0.144 0.106 0.87 CD4_TCM L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 6.03e-01 0.0656 0.126 0.87 CD4_TEM L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 5.86e-01 0.0655 0.12 0.87 CD4_TEM L2
ENSG00000134644 PUM1 -151120 sc-eQTL 9.39e-01 0.00763 0.1 0.87 CD4_TEM L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 5.84e-01 0.0555 0.101 0.87 CD4_TEM L2
ENSG00000162517 PEF1 -730025 sc-eQTL 1.06e-01 0.183 0.113 0.87 CD4_TEM L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 2.03e-01 -0.151 0.118 0.87 CD4_TEM L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 7.19e-01 0.0421 0.117 0.87 CD4_TEM L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 1.65e-01 -0.201 0.145 0.87 CD8_CTL L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 8.43e-01 -0.0221 0.111 0.87 CD8_CTL L2
ENSG00000134644 PUM1 -151120 sc-eQTL 1.09e-01 0.173 0.107 0.87 CD8_CTL L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 2.10e-01 0.15 0.119 0.87 CD8_CTL L2
ENSG00000162517 PEF1 -730025 sc-eQTL 9.11e-01 0.0116 0.104 0.87 CD8_CTL L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 2.66e-01 0.14 0.125 0.87 CD8_CTL L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 8.45e-01 0.0231 0.118 0.87 CD8_CTL L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 3.82e-01 0.11 0.125 0.87 CD8_Naive L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 3.71e-01 0.0967 0.108 0.87 CD8_Naive L2
ENSG00000134644 PUM1 -151120 sc-eQTL 2.32e-01 0.104 0.0867 0.87 CD8_Naive L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 9.36e-01 -0.00673 0.0834 0.87 CD8_Naive L2
ENSG00000162517 PEF1 -730025 sc-eQTL 3.53e-01 -0.108 0.116 0.87 CD8_Naive L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 3.59e-01 -0.0955 0.104 0.87 CD8_Naive L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 7.89e-01 -0.0304 0.113 0.87 CD8_Naive L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 8.86e-01 0.0199 0.138 0.863 CD8_TCM L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 7.43e-01 0.0417 0.127 0.863 CD8_TCM L2
ENSG00000134644 PUM1 -151120 sc-eQTL 1.89e-01 0.157 0.119 0.863 CD8_TCM L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 2.73e-01 0.137 0.125 0.863 CD8_TCM L2
ENSG00000162517 PEF1 -730025 sc-eQTL 7.49e-01 -0.0409 0.128 0.863 CD8_TCM L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 9.52e-01 0.00698 0.116 0.863 CD8_TCM L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 5.53e-02 0.223 0.116 0.863 CD8_TCM L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 8.07e-01 -0.0336 0.137 0.872 CD8_TEM L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 9.01e-02 -0.222 0.13 0.872 CD8_TEM L2
ENSG00000134644 PUM1 -151120 sc-eQTL 3.62e-01 -0.122 0.134 0.872 CD8_TEM L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 2.04e-01 -0.16 0.126 0.872 CD8_TEM L2
ENSG00000162517 PEF1 -730025 sc-eQTL 2.59e-01 -0.134 0.118 0.872 CD8_TEM L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 6.08e-01 0.0672 0.131 0.872 CD8_TEM L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 3.10e-01 -0.12 0.118 0.872 CD8_TEM L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 1.05e-01 -0.216 0.133 0.868 MAIT L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 7.94e-01 -0.031 0.118 0.868 MAIT L2
ENSG00000134644 PUM1 -151120 sc-eQTL 1.22e-01 0.175 0.113 0.868 MAIT L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 6.38e-01 -0.0504 0.107 0.868 MAIT L2
ENSG00000162517 PEF1 -730025 sc-eQTL 7.75e-01 -0.0337 0.118 0.868 MAIT L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 3.62e-01 0.109 0.119 0.868 MAIT L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 6.70e-01 0.0525 0.123 0.868 MAIT L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 5.34e-01 -0.0861 0.138 0.871 NK_CD56bright L2
ENSG00000121753 ADGRB2 -850022 sc-eQTL 1.67e-01 -0.149 0.108 0.871 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 5.54e-01 -0.0691 0.117 0.871 NK_CD56bright L2
ENSG00000134644 PUM1 -151120 sc-eQTL 1.54e-01 -0.175 0.122 0.871 NK_CD56bright L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 7.72e-01 0.0351 0.121 0.871 NK_CD56bright L2
ENSG00000162517 PEF1 -730025 sc-eQTL 6.62e-01 0.0514 0.117 0.871 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 1.85e-01 0.161 0.121 0.871 NK_CD56bright L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 8.56e-01 -0.0217 0.12 0.871 NK_CD56bright L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 2.00e-01 -0.166 0.129 0.869 NK_CD56dim L2
ENSG00000121753 ADGRB2 -850022 sc-eQTL 6.13e-01 0.0578 0.114 0.869 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 6.70e-01 0.041 0.0961 0.869 NK_CD56dim L2
ENSG00000134644 PUM1 -151120 sc-eQTL 8.86e-01 0.0142 0.0986 0.869 NK_CD56dim L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 3.54e-02 0.22 0.104 0.869 NK_CD56dim L2
ENSG00000162517 PEF1 -730025 sc-eQTL 8.27e-01 -0.0205 0.0936 0.869 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 9.62e-01 0.00622 0.132 0.869 NK_CD56dim L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 9.42e-02 -0.182 0.108 0.869 NK_CD56dim L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 1.39e-01 -0.21 0.142 0.874 NK_HLA L2
ENSG00000121753 ADGRB2 -850022 sc-eQTL 7.66e-01 0.0337 0.113 0.874 NK_HLA L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 7.85e-01 0.0348 0.127 0.874 NK_HLA L2
ENSG00000134644 PUM1 -151120 sc-eQTL 9.40e-01 -0.00927 0.124 0.874 NK_HLA L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 1.48e-01 0.171 0.118 0.874 NK_HLA L2
ENSG00000162517 PEF1 -730025 sc-eQTL 6.08e-01 0.0683 0.133 0.874 NK_HLA L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 8.26e-01 0.0276 0.126 0.874 NK_HLA L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 7.60e-01 0.0372 0.122 0.874 NK_HLA L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 3.43e-01 -0.121 0.127 0.869 NK_cytokine L2
ENSG00000121753 ADGRB2 -850022 sc-eQTL 4.99e-01 0.0778 0.115 0.869 NK_cytokine L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 8.70e-01 0.0163 0.0994 0.869 NK_cytokine L2
ENSG00000134644 PUM1 -151120 sc-eQTL 3.76e-01 0.0952 0.107 0.869 NK_cytokine L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 1.59e-01 0.166 0.118 0.869 NK_cytokine L2
ENSG00000162517 PEF1 -730025 sc-eQTL 5.07e-01 0.0669 0.101 0.869 NK_cytokine L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 7.06e-01 0.0473 0.125 0.869 NK_cytokine L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 8.29e-01 0.0252 0.117 0.869 NK_cytokine L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 2.89e-01 -0.154 0.144 0.874 PB L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 7.68e-01 -0.0497 0.168 0.874 PB L2
ENSG00000134644 PUM1 -151120 sc-eQTL 9.59e-01 0.00743 0.146 0.874 PB L2
ENSG00000162510 MATN1 191286 sc-eQTL 4.25e-01 -0.109 0.136 0.874 PB L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 2.63e-01 0.109 0.0967 0.874 PB L2
ENSG00000162517 PEF1 -730025 sc-eQTL 8.95e-02 -0.253 0.148 0.874 PB L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 2.89e-01 -0.141 0.132 0.874 PB L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 5.18e-01 0.0917 0.141 0.874 PB L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 7.96e-01 0.0261 0.101 0.87 Pro_T L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 8.04e-01 0.0317 0.128 0.87 Pro_T L2
ENSG00000134644 PUM1 -151120 sc-eQTL 3.56e-01 0.11 0.119 0.87 Pro_T L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 1.35e-01 -0.127 0.085 0.87 Pro_T L2
ENSG00000162517 PEF1 -730025 sc-eQTL 4.41e-02 -0.251 0.124 0.87 Pro_T L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 5.59e-01 -0.0699 0.119 0.87 Pro_T L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 7.98e-01 -0.0281 0.11 0.87 Pro_T L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 8.81e-01 0.0196 0.13 0.87 Treg L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 7.30e-01 0.0435 0.126 0.87 Treg L2
ENSG00000134644 PUM1 -151120 sc-eQTL 9.21e-01 0.01 0.101 0.87 Treg L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 8.75e-01 -0.0182 0.115 0.87 Treg L2
ENSG00000162517 PEF1 -730025 sc-eQTL 8.70e-02 -0.213 0.124 0.87 Treg L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 8.31e-01 0.0251 0.118 0.87 Treg L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 6.71e-01 -0.0499 0.117 0.87 Treg L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 7.51e-01 0.0427 0.135 0.876 cDC L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 5.77e-01 -0.0813 0.146 0.876 cDC L2
ENSG00000134644 PUM1 -151120 sc-eQTL 7.96e-01 0.0324 0.125 0.876 cDC L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 5.95e-01 -0.0467 0.0876 0.876 cDC L2
ENSG00000162517 PEF1 -730025 sc-eQTL 5.86e-01 0.0692 0.127 0.876 cDC L2
ENSG00000168528 SERINC2 -494694 sc-eQTL 4.95e-01 0.077 0.112 0.876 cDC L2
ENSG00000284543 LINC01226 -591355 sc-eQTL 3.88e-01 -0.0956 0.11 0.876 cDC L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 8.61e-01 -0.0209 0.119 0.876 cDC L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 1.15e-01 -0.167 0.105 0.87 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 5.69e-01 0.0672 0.118 0.87 cMono_IL1B L2
ENSG00000134644 PUM1 -151120 sc-eQTL 4.99e-01 -0.0541 0.0798 0.87 cMono_IL1B L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 6.42e-01 0.0327 0.0701 0.87 cMono_IL1B L2
ENSG00000162512 SDC3 6113 sc-eQTL 5.25e-02 -0.255 0.131 0.87 cMono_IL1B L2
ENSG00000162517 PEF1 -730025 sc-eQTL 4.66e-01 -0.0787 0.108 0.87 cMono_IL1B L2
ENSG00000168528 SERINC2 -494694 sc-eQTL 9.68e-01 0.00539 0.134 0.87 cMono_IL1B L2
ENSG00000284543 LINC01226 -591355 sc-eQTL 5.70e-01 -0.0673 0.118 0.87 cMono_IL1B L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 7.33e-01 0.0376 0.11 0.87 cMono_IL1B L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 3.30e-01 0.108 0.11 0.87 cMono_S100A L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 9.79e-01 -0.00349 0.131 0.87 cMono_S100A L2
ENSG00000134644 PUM1 -151120 sc-eQTL 9.35e-01 -0.0077 0.0945 0.87 cMono_S100A L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 8.16e-01 0.0169 0.0727 0.87 cMono_S100A L2
ENSG00000162512 SDC3 6113 sc-eQTL 6.63e-02 -0.23 0.125 0.87 cMono_S100A L2
ENSG00000162517 PEF1 -730025 sc-eQTL 8.17e-01 -0.0263 0.113 0.87 cMono_S100A L2
ENSG00000168528 SERINC2 -494694 sc-eQTL 6.78e-01 -0.0553 0.133 0.87 cMono_S100A L2
ENSG00000284543 LINC01226 -591355 sc-eQTL 8.25e-02 -0.187 0.107 0.87 cMono_S100A L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 9.58e-01 -0.00577 0.108 0.87 cMono_S100A L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 7.56e-01 -0.0496 0.159 0.858 gdT L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 6.31e-01 -0.0658 0.137 0.858 gdT L2
ENSG00000134644 PUM1 -151120 sc-eQTL 2.16e-01 -0.175 0.14 0.858 gdT L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 8.19e-01 0.0352 0.153 0.858 gdT L2
ENSG00000162517 PEF1 -730025 sc-eQTL 3.01e-02 0.302 0.138 0.858 gdT L2
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 9.40e-01 0.0108 0.142 0.858 gdT L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 5.51e-01 0.0819 0.137 0.858 gdT L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 6.87e-01 0.0496 0.123 0.873 intMono L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 2.98e-01 -0.138 0.132 0.873 intMono L2
ENSG00000134644 PUM1 -151120 sc-eQTL 6.05e-01 -0.058 0.112 0.873 intMono L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 1.61e-01 0.123 0.0875 0.873 intMono L2
ENSG00000162512 SDC3 6113 sc-eQTL 1.15e-01 -0.189 0.12 0.873 intMono L2
ENSG00000162517 PEF1 -730025 sc-eQTL 6.46e-01 0.0581 0.126 0.873 intMono L2
ENSG00000168528 SERINC2 -494694 sc-eQTL 8.82e-01 -0.0188 0.126 0.873 intMono L2
ENSG00000284543 LINC01226 -591355 sc-eQTL 8.53e-01 -0.0222 0.119 0.873 intMono L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 8.05e-01 -0.0295 0.119 0.873 intMono L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 9.42e-01 0.00832 0.114 0.871 ncMono L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 7.96e-01 -0.0315 0.122 0.871 ncMono L2
ENSG00000134644 PUM1 -151120 sc-eQTL 9.00e-02 -0.168 0.0988 0.871 ncMono L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 5.42e-01 0.0552 0.0903 0.871 ncMono L2
ENSG00000162512 SDC3 6113 sc-eQTL 1.68e-01 -0.14 0.101 0.871 ncMono L2
ENSG00000162517 PEF1 -730025 sc-eQTL 5.12e-01 -0.0763 0.116 0.871 ncMono L2
ENSG00000168528 SERINC2 -494694 sc-eQTL 9.35e-01 -0.00903 0.111 0.871 ncMono L2
ENSG00000284543 LINC01226 -591355 sc-eQTL 7.92e-01 0.0291 0.11 0.871 ncMono L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 6.01e-01 -0.06 0.114 0.871 ncMono L2
ENSG00000060688 SNRNP40 -381917 sc-eQTL 3.15e-01 -0.137 0.136 0.864 pDC L2
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 7.47e-01 -0.0485 0.15 0.864 pDC L2
ENSG00000134644 PUM1 -151120 sc-eQTL 7.49e-01 0.0398 0.124 0.864 pDC L2
ENSG00000162511 LAPTM5 157097 sc-eQTL 3.43e-02 0.243 0.114 0.864 pDC L2
ENSG00000162517 PEF1 -730025 sc-eQTL 6.01e-01 0.0785 0.15 0.864 pDC L2
ENSG00000168528 SERINC2 -494694 sc-eQTL 2.44e-01 0.163 0.139 0.864 pDC L2
ENSG00000284543 LINC01226 -591355 sc-eQTL 1.37e-01 0.161 0.108 0.864 pDC L2
ENSG00000287510 AL137857.1 183178 sc-eQTL 5.66e-01 0.0735 0.128 0.864 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -381917 sc-eQTL 5.94e-01 -0.072 0.135 0.87 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 2.99e-01 -0.117 0.112 0.87 B_Memory LOneK1K
ENSG00000134644 PUM1 -151120 sc-eQTL 1.63e-01 -0.139 0.0991 0.87 B_Memory LOneK1K
ENSG00000162510 MATN1 191286 sc-eQTL 8.73e-01 0.0181 0.113 0.87 B_Memory LOneK1K
ENSG00000162511 LAPTM5 157097 sc-eQTL 9.15e-01 0.00759 0.0713 0.87 B_Memory LOneK1K
ENSG00000162517 PEF1 -730025 sc-eQTL 4.12e-01 -0.0969 0.118 0.87 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 1.34e-02 -0.232 0.093 0.87 B_Memory LOneK1K
ENSG00000287510 AL137857.1 183178 sc-eQTL 9.60e-02 -0.171 0.102 0.87 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -381917 sc-eQTL 7.16e-01 -0.0437 0.12 0.87 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 3.52e-01 -0.0883 0.0946 0.87 B_Naive LOneK1K
ENSG00000134644 PUM1 -151120 sc-eQTL 9.61e-01 0.00437 0.0897 0.87 B_Naive LOneK1K
ENSG00000162510 MATN1 191286 sc-eQTL 4.94e-01 0.0591 0.0863 0.87 B_Naive LOneK1K
ENSG00000162511 LAPTM5 157097 sc-eQTL 9.50e-01 0.0038 0.0608 0.87 B_Naive LOneK1K
ENSG00000162517 PEF1 -730025 sc-eQTL 3.58e-01 0.102 0.111 0.87 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 1.91e-01 0.103 0.0782 0.87 B_Naive LOneK1K
ENSG00000287510 AL137857.1 183178 sc-eQTL 8.98e-01 -0.012 0.0933 0.87 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -381917 sc-eQTL 8.53e-01 -0.0186 0.101 0.87 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 5.38e-01 0.0702 0.114 0.87 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -151120 sc-eQTL 6.37e-01 -0.0343 0.0727 0.87 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 157097 sc-eQTL 7.80e-01 0.0178 0.0639 0.87 CD14_Mono LOneK1K
ENSG00000162512 SDC3 6113 sc-eQTL 1.11e-02 -0.329 0.128 0.87 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -730025 sc-eQTL 7.09e-01 -0.0342 0.0916 0.87 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -494694 sc-eQTL 8.71e-01 -0.0218 0.134 0.87 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -591355 sc-eQTL 4.20e-01 -0.0887 0.11 0.87 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 183178 sc-eQTL 8.79e-01 0.0157 0.103 0.87 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -381917 sc-eQTL 4.10e-01 0.0894 0.108 0.869 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 2.74e-01 -0.13 0.118 0.869 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -151120 sc-eQTL 4.66e-02 -0.193 0.0964 0.869 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 157097 sc-eQTL 4.15e-01 0.0635 0.0777 0.869 CD16_Mono LOneK1K
ENSG00000162512 SDC3 6113 sc-eQTL 4.90e-02 -0.223 0.113 0.869 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -730025 sc-eQTL 9.54e-01 0.00591 0.103 0.869 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -494694 sc-eQTL 6.34e-01 0.0562 0.118 0.869 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -591355 sc-eQTL 8.13e-01 0.0265 0.112 0.869 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 183178 sc-eQTL 3.75e-01 -0.0994 0.112 0.869 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -381917 sc-eQTL 5.92e-02 -0.232 0.122 0.869 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -850022 sc-eQTL 3.54e-01 0.0973 0.105 0.869 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -382111 sc-eQTL 6.81e-01 0.0347 0.0841 0.869 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -151120 sc-eQTL 4.31e-01 0.0726 0.092 0.869 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 157097 sc-eQTL 1.32e-02 0.254 0.102 0.869 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -730025 sc-eQTL 8.41e-01 0.0157 0.0783 0.869 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 196367 sc-eQTL 5.29e-01 0.0748 0.119 0.869 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 183178 sc-eQTL 2.23e-01 -0.125 0.102 0.869 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -381917 eQTL 0.00908 0.0639 0.0244 0.00106 0.0 0.129
ENSG00000121766 ZCCHC17 -382111 eQTL 9.10e-04 0.0852 0.0256 0.0 0.0 0.129
ENSG00000162512 SDC3 6113 eQTL 4.06e-10 -0.221 0.035 0.0 0.0 0.129
ENSG00000168528 SERINC2 -494694 eQTL 0.02 -0.13 0.0559 0.0 0.0 0.129
ENSG00000237329 AL356320.2 -121863 eQTL 0.00655 0.137 0.0504 0.00182 0.0 0.129

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -382111 1.09e-06 9.09e-07 1.02e-07 3.54e-07 1.09e-07 3.24e-07 6.87e-07 1.73e-07 7.56e-07 3.1e-07 1.1e-06 5.28e-07 1.05e-06 2.14e-07 3.08e-07 2.99e-07 5.34e-07 4.16e-07 2.65e-07 2.37e-07 2.52e-07 5.49e-07 5.41e-07 2.6e-07 1.54e-06 2.74e-07 4.37e-07 3.95e-07 5.42e-07 8.38e-07 4.02e-07 5.77e-08 4.62e-08 1.9e-07 3.18e-07 1.61e-07 1.11e-07 1.21e-07 6.66e-08 8.15e-09 1.16e-07 9.49e-07 4.41e-08 1.25e-08 1.58e-07 4.28e-08 1.32e-07 2.35e-08 5.13e-08
ENSG00000162512 SDC3 6113 3.54e-05 3.29e-05 6.26e-06 1.56e-05 5.91e-06 1.45e-05 4.51e-05 4.55e-06 3.11e-05 1.56e-05 3.84e-05 1.77e-05 4.85e-05 1.41e-05 7.05e-06 1.88e-05 1.8e-05 2.52e-05 7.91e-06 6.89e-06 1.54e-05 3.34e-05 3.2e-05 9.41e-06 4.49e-05 7.99e-06 1.41e-05 1.28e-05 3.15e-05 2.64e-05 2.03e-05 1.64e-06 2.62e-06 7.07e-06 1.2e-05 5.78e-06 3.2e-06 3.11e-06 4.95e-06 3.36e-06 1.74e-06 3.78e-05 3.63e-06 3.73e-07 2.55e-06 3.94e-06 4.05e-06 1.57e-06 1.5e-06
ENSG00000237329 AL356320.2 -121863 4.29e-06 5.27e-06 6.25e-07 3.22e-06 1.1e-06 1.67e-06 4.27e-06 9.52e-07 4.94e-06 2.11e-06 5.26e-06 3.52e-06 7.26e-06 2.22e-06 1.37e-06 2.63e-06 2.09e-06 2.74e-06 1.36e-06 9.87e-07 2.05e-06 4.61e-06 4e-06 1.57e-06 6.86e-06 1.3e-06 2.47e-06 1.84e-06 4.4e-06 4.12e-06 2.68e-06 5.07e-07 6.07e-07 1.87e-06 2.27e-06 8.71e-07 9.07e-07 4.59e-07 1.27e-06 3.41e-07 2.79e-07 5.64e-06 4.11e-07 1.67e-07 3.81e-07 6.74e-07 7.44e-07 2.07e-07 1.78e-07