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Genes within 1Mb (chr1:30904896:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -391892 sc-eQTL 6.81e-01 -0.0368 0.0896 0.782 B L1
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 5.83e-01 -0.0394 0.0717 0.782 B L1
ENSG00000134644 PUM1 -161095 sc-eQTL 6.93e-01 0.0238 0.0602 0.782 B L1
ENSG00000162510 MATN1 181311 sc-eQTL 9.19e-02 0.106 0.0629 0.782 B L1
ENSG00000162511 LAPTM5 147122 sc-eQTL 5.34e-01 0.0309 0.0495 0.782 B L1
ENSG00000162517 PEF1 -740000 sc-eQTL 9.01e-01 -0.0093 0.0748 0.782 B L1
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 4.10e-01 0.0479 0.058 0.782 B L1
ENSG00000287510 AL137857.1 173203 sc-eQTL 6.84e-01 -0.028 0.0687 0.782 B L1
ENSG00000060688 SNRNP40 -391892 sc-eQTL 3.15e-01 0.0763 0.0758 0.782 CD4T L1
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 7.15e-01 -0.0217 0.0593 0.782 CD4T L1
ENSG00000134644 PUM1 -161095 sc-eQTL 4.03e-01 0.0442 0.0527 0.782 CD4T L1
ENSG00000162511 LAPTM5 147122 sc-eQTL 6.77e-01 -0.0244 0.0585 0.782 CD4T L1
ENSG00000162517 PEF1 -740000 sc-eQTL 1.94e-01 -0.0794 0.061 0.782 CD4T L1
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 5.71e-01 0.0297 0.0523 0.782 CD4T L1
ENSG00000287510 AL137857.1 173203 sc-eQTL 7.39e-01 -0.0209 0.0627 0.782 CD4T L1
ENSG00000060688 SNRNP40 -391892 sc-eQTL 3.93e-01 0.0852 0.0995 0.782 CD8T L1
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 9.47e-01 -0.00439 0.0663 0.782 CD8T L1
ENSG00000134644 PUM1 -161095 sc-eQTL 6.83e-02 0.106 0.058 0.782 CD8T L1
ENSG00000162511 LAPTM5 147122 sc-eQTL 1.52e-01 0.0813 0.0565 0.782 CD8T L1
ENSG00000162517 PEF1 -740000 sc-eQTL 7.80e-01 -0.0196 0.0699 0.782 CD8T L1
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 1.74e-01 0.0903 0.0662 0.782 CD8T L1
ENSG00000287510 AL137857.1 173203 sc-eQTL 4.70e-01 0.0603 0.0834 0.782 CD8T L1
ENSG00000060688 SNRNP40 -391892 sc-eQTL 8.97e-01 0.0116 0.0894 0.775 DC L1
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 5.08e-01 -0.0701 0.106 0.775 DC L1
ENSG00000134644 PUM1 -161095 sc-eQTL 4.49e-01 -0.0628 0.0828 0.775 DC L1
ENSG00000162511 LAPTM5 147122 sc-eQTL 4.12e-01 -0.0486 0.0591 0.775 DC L1
ENSG00000162517 PEF1 -740000 sc-eQTL 8.26e-01 -0.0211 0.096 0.775 DC L1
ENSG00000168528 SERINC2 -504669 sc-eQTL 9.82e-02 0.161 0.097 0.775 DC L1
ENSG00000284543 LINC01226 -601330 sc-eQTL 6.37e-01 -0.0306 0.0647 0.775 DC L1
ENSG00000287510 AL137857.1 173203 sc-eQTL 7.01e-01 0.036 0.0936 0.775 DC L1
ENSG00000060688 SNRNP40 -391892 sc-eQTL 8.75e-01 -0.0109 0.0693 0.782 Mono L1
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 3.92e-01 -0.0736 0.0857 0.782 Mono L1
ENSG00000134644 PUM1 -161095 sc-eQTL 1.77e-01 -0.0742 0.0548 0.782 Mono L1
ENSG00000162511 LAPTM5 147122 sc-eQTL 8.30e-01 -0.0109 0.0506 0.782 Mono L1
ENSG00000162512 SDC3 -3862 sc-eQTL 9.75e-01 0.00307 0.0973 0.782 Mono L1
ENSG00000162517 PEF1 -740000 sc-eQTL 6.23e-01 -0.0336 0.0683 0.782 Mono L1
ENSG00000168528 SERINC2 -504669 sc-eQTL 9.22e-01 -0.0103 0.104 0.782 Mono L1
ENSG00000284543 LINC01226 -601330 sc-eQTL 2.44e-01 -0.107 0.0917 0.782 Mono L1
ENSG00000287510 AL137857.1 173203 sc-eQTL 4.12e-01 0.066 0.0803 0.782 Mono L1
ENSG00000060688 SNRNP40 -391892 sc-eQTL 7.43e-01 0.0315 0.096 0.781 NK L1
ENSG00000121753 ADGRB2 -859997 sc-eQTL 7.43e-01 0.0271 0.0826 0.781 NK L1
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 9.58e-01 0.00342 0.0657 0.781 NK L1
ENSG00000134644 PUM1 -161095 sc-eQTL 8.20e-02 0.12 0.0685 0.781 NK L1
ENSG00000162511 LAPTM5 147122 sc-eQTL 8.93e-02 0.135 0.0788 0.781 NK L1
ENSG00000162517 PEF1 -740000 sc-eQTL 9.96e-01 0.00029 0.0579 0.781 NK L1
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 5.50e-01 0.0534 0.0891 0.781 NK L1
ENSG00000287510 AL137857.1 173203 sc-eQTL 6.08e-01 -0.0423 0.0823 0.781 NK L1
ENSG00000060688 SNRNP40 -391892 sc-eQTL 2.67e-01 -0.0807 0.0725 0.782 Other_T L1
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 9.16e-01 0.00818 0.0777 0.782 Other_T L1
ENSG00000134644 PUM1 -161095 sc-eQTL 1.76e-01 0.0945 0.0696 0.782 Other_T L1
ENSG00000162511 LAPTM5 147122 sc-eQTL 5.15e-01 0.0374 0.0572 0.782 Other_T L1
ENSG00000162517 PEF1 -740000 sc-eQTL 9.62e-01 0.00361 0.0765 0.782 Other_T L1
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 8.51e-01 0.0176 0.0938 0.782 Other_T L1
ENSG00000287510 AL137857.1 173203 sc-eQTL 9.58e-01 0.00518 0.0977 0.782 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -391892 sc-eQTL 7.83e-01 -0.0337 0.122 0.791 B_Activated L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 4.16e-01 -0.1 0.123 0.791 B_Activated L2
ENSG00000134644 PUM1 -161095 sc-eQTL 5.51e-01 0.0683 0.114 0.791 B_Activated L2
ENSG00000162510 MATN1 181311 sc-eQTL 3.02e-01 -0.103 0.0996 0.791 B_Activated L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 5.68e-01 -0.0399 0.0696 0.791 B_Activated L2
ENSG00000162517 PEF1 -740000 sc-eQTL 3.94e-01 0.101 0.118 0.791 B_Activated L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 2.33e-05 -0.465 0.107 0.791 B_Activated L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 6.04e-01 -0.0517 0.0995 0.791 B_Activated L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 2.12e-01 -0.137 0.109 0.781 B_Intermediate L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 3.86e-01 0.0794 0.0913 0.781 B_Intermediate L2
ENSG00000134644 PUM1 -161095 sc-eQTL 1.33e-01 -0.129 0.0858 0.781 B_Intermediate L2
ENSG00000162510 MATN1 181311 sc-eQTL 1.57e-01 -0.127 0.0894 0.781 B_Intermediate L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 8.85e-01 -0.00798 0.0551 0.781 B_Intermediate L2
ENSG00000162517 PEF1 -740000 sc-eQTL 4.60e-01 -0.0756 0.102 0.781 B_Intermediate L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 6.82e-01 -0.0317 0.0773 0.781 B_Intermediate L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 8.51e-01 -0.0163 0.0866 0.781 B_Intermediate L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 6.35e-01 0.0499 0.105 0.78 B_Memory L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 2.96e-01 -0.101 0.0965 0.78 B_Memory L2
ENSG00000134644 PUM1 -161095 sc-eQTL 4.45e-01 -0.0643 0.0841 0.78 B_Memory L2
ENSG00000162510 MATN1 181311 sc-eQTL 3.65e-01 0.073 0.0804 0.78 B_Memory L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 7.65e-01 0.0213 0.0714 0.78 B_Memory L2
ENSG00000162517 PEF1 -740000 sc-eQTL 4.59e-02 -0.19 0.0944 0.78 B_Memory L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 2.00e-01 -0.105 0.0814 0.78 B_Memory L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 2.37e-01 0.113 0.0954 0.78 B_Memory L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 5.76e-01 -0.0548 0.0978 0.782 B_Naive1 L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 9.63e-01 0.00387 0.0845 0.782 B_Naive1 L2
ENSG00000134644 PUM1 -161095 sc-eQTL 8.99e-01 0.00945 0.0746 0.782 B_Naive1 L2
ENSG00000162510 MATN1 181311 sc-eQTL 7.15e-02 0.136 0.0751 0.782 B_Naive1 L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 2.17e-01 -0.0623 0.0503 0.782 B_Naive1 L2
ENSG00000162517 PEF1 -740000 sc-eQTL 1.68e-01 0.123 0.0887 0.782 B_Naive1 L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 4.21e-01 0.0534 0.0663 0.782 B_Naive1 L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 7.77e-01 -0.0233 0.082 0.782 B_Naive1 L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 6.58e-01 0.0461 0.104 0.781 B_Naive2 L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 6.95e-01 0.0336 0.0857 0.781 B_Naive2 L2
ENSG00000134644 PUM1 -161095 sc-eQTL 3.60e-01 0.0768 0.0837 0.781 B_Naive2 L2
ENSG00000162510 MATN1 181311 sc-eQTL 6.73e-01 0.0341 0.0805 0.781 B_Naive2 L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 3.30e-01 -0.0533 0.0546 0.781 B_Naive2 L2
ENSG00000162517 PEF1 -740000 sc-eQTL 5.34e-01 0.0619 0.0994 0.781 B_Naive2 L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 5.49e-01 0.0477 0.0796 0.781 B_Naive2 L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 6.78e-01 0.0357 0.086 0.781 B_Naive2 L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 4.86e-01 -0.0724 0.104 0.784 CD4_CTL L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 4.83e-01 0.0717 0.102 0.784 CD4_CTL L2
ENSG00000134644 PUM1 -161095 sc-eQTL 5.59e-01 0.0586 0.1 0.784 CD4_CTL L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 1.47e-01 -0.129 0.0889 0.784 CD4_CTL L2
ENSG00000162517 PEF1 -740000 sc-eQTL 8.85e-02 -0.156 0.0909 0.784 CD4_CTL L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 5.63e-01 0.0566 0.0977 0.784 CD4_CTL L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 5.18e-01 0.0558 0.0862 0.784 CD4_CTL L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 3.28e-01 0.0775 0.079 0.782 CD4_Naive L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 8.50e-01 -0.0133 0.0702 0.782 CD4_Naive L2
ENSG00000134644 PUM1 -161095 sc-eQTL 5.78e-01 0.0312 0.056 0.782 CD4_Naive L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 6.18e-01 -0.03 0.0601 0.782 CD4_Naive L2
ENSG00000162517 PEF1 -740000 sc-eQTL 3.43e-01 -0.0625 0.0658 0.782 CD4_Naive L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 8.36e-01 0.0127 0.061 0.782 CD4_Naive L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 8.60e-01 0.0124 0.07 0.782 CD4_Naive L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 3.67e-02 0.208 0.0987 0.782 CD4_TCM L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 5.38e-01 0.0496 0.0803 0.782 CD4_TCM L2
ENSG00000134644 PUM1 -161095 sc-eQTL 1.00e+00 2.01e-05 0.0712 0.782 CD4_TCM L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 7.38e-01 -0.0197 0.059 0.782 CD4_TCM L2
ENSG00000162517 PEF1 -740000 sc-eQTL 6.35e-01 -0.0376 0.0791 0.782 CD4_TCM L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 8.94e-02 0.127 0.0744 0.782 CD4_TCM L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 1.70e-01 -0.114 0.0831 0.782 CD4_TCM L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 3.29e-01 -0.0967 0.0989 0.782 CD4_TEM L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 6.40e-01 0.0443 0.0944 0.782 CD4_TEM L2
ENSG00000134644 PUM1 -161095 sc-eQTL 9.37e-01 -0.00622 0.0787 0.782 CD4_TEM L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 8.39e-01 0.0162 0.0796 0.782 CD4_TEM L2
ENSG00000162517 PEF1 -740000 sc-eQTL 3.07e-01 0.0911 0.0889 0.782 CD4_TEM L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 4.14e-01 0.0761 0.0929 0.782 CD4_TEM L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 1.61e-01 0.128 0.0913 0.782 CD4_TEM L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 7.79e-01 0.0308 0.109 0.782 CD8_CTL L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 7.79e-01 0.0235 0.0838 0.782 CD8_CTL L2
ENSG00000134644 PUM1 -161095 sc-eQTL 2.82e-01 0.0875 0.0812 0.782 CD8_CTL L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 2.39e-01 0.106 0.0899 0.782 CD8_CTL L2
ENSG00000162517 PEF1 -740000 sc-eQTL 9.39e-01 -0.00597 0.0785 0.782 CD8_CTL L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 4.42e-01 0.0729 0.0947 0.782 CD8_CTL L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 6.06e-01 0.0461 0.0891 0.782 CD8_CTL L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 3.82e-01 0.0876 0.1 0.782 CD8_Naive L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 7.49e-01 0.0277 0.0865 0.782 CD8_Naive L2
ENSG00000134644 PUM1 -161095 sc-eQTL 4.71e-01 0.0502 0.0695 0.782 CD8_Naive L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 6.70e-01 0.0285 0.0667 0.782 CD8_Naive L2
ENSG00000162517 PEF1 -740000 sc-eQTL 8.72e-01 -0.0149 0.0927 0.782 CD8_Naive L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 8.85e-01 0.012 0.0832 0.782 CD8_Naive L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 5.27e-01 0.0574 0.0905 0.782 CD8_Naive L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 2.34e-01 0.131 0.11 0.778 CD8_TCM L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 8.42e-01 -0.0202 0.101 0.778 CD8_TCM L2
ENSG00000134644 PUM1 -161095 sc-eQTL 2.86e-02 0.207 0.0939 0.778 CD8_TCM L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 5.03e-01 0.0668 0.0995 0.778 CD8_TCM L2
ENSG00000162517 PEF1 -740000 sc-eQTL 3.03e-01 -0.105 0.101 0.778 CD8_TCM L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 5.21e-01 0.0592 0.0921 0.778 CD8_TCM L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 8.62e-02 0.159 0.0924 0.778 CD8_TCM L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 3.29e-01 -0.105 0.107 0.781 CD8_TEM L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 1.39e-01 -0.152 0.102 0.781 CD8_TEM L2
ENSG00000134644 PUM1 -161095 sc-eQTL 8.95e-01 -0.0139 0.105 0.781 CD8_TEM L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 6.14e-01 -0.0499 0.0988 0.781 CD8_TEM L2
ENSG00000162517 PEF1 -740000 sc-eQTL 7.32e-01 -0.0319 0.0931 0.781 CD8_TEM L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 7.34e-02 0.183 0.102 0.781 CD8_TEM L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 2.52e-01 0.106 0.0926 0.781 CD8_TEM L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 5.80e-01 -0.0591 0.107 0.781 MAIT L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 9.29e-01 0.00849 0.0945 0.781 MAIT L2
ENSG00000134644 PUM1 -161095 sc-eQTL 9.63e-02 0.15 0.09 0.781 MAIT L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 7.17e-01 0.0311 0.0854 0.781 MAIT L2
ENSG00000162517 PEF1 -740000 sc-eQTL 3.92e-01 -0.0804 0.0937 0.781 MAIT L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 8.55e-01 0.0175 0.0952 0.781 MAIT L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 8.35e-01 -0.0205 0.0981 0.781 MAIT L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 7.54e-01 -0.0335 0.107 0.778 NK_CD56bright L2
ENSG00000121753 ADGRB2 -859997 sc-eQTL 9.13e-02 -0.141 0.083 0.778 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 6.82e-01 0.037 0.0901 0.778 NK_CD56bright L2
ENSG00000134644 PUM1 -161095 sc-eQTL 8.72e-01 -0.0153 0.0947 0.778 NK_CD56bright L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 6.24e-01 0.0459 0.0933 0.778 NK_CD56bright L2
ENSG00000162517 PEF1 -740000 sc-eQTL 8.16e-01 -0.0211 0.0907 0.778 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 3.95e-01 0.0798 0.0937 0.778 NK_CD56bright L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 9.14e-01 -0.01 0.0925 0.778 NK_CD56bright L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 6.25e-01 0.0494 0.101 0.78 NK_CD56dim L2
ENSG00000121753 ADGRB2 -859997 sc-eQTL 3.94e-01 0.0759 0.0888 0.78 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 4.39e-01 0.0579 0.0747 0.78 NK_CD56dim L2
ENSG00000134644 PUM1 -161095 sc-eQTL 1.29e-01 0.116 0.0763 0.78 NK_CD56dim L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 8.31e-02 0.141 0.0812 0.78 NK_CD56dim L2
ENSG00000162517 PEF1 -740000 sc-eQTL 2.50e-01 0.0837 0.0726 0.78 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 8.60e-01 0.0181 0.103 0.78 NK_CD56dim L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 2.82e-01 -0.091 0.0843 0.78 NK_CD56dim L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 3.14e-01 -0.109 0.108 0.785 NK_HLA L2
ENSG00000121753 ADGRB2 -859997 sc-eQTL 9.17e-01 0.00904 0.0863 0.785 NK_HLA L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 5.42e-01 -0.0592 0.097 0.785 NK_HLA L2
ENSG00000134644 PUM1 -161095 sc-eQTL 7.43e-01 0.031 0.0946 0.785 NK_HLA L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 7.51e-01 0.0286 0.0903 0.785 NK_HLA L2
ENSG00000162517 PEF1 -740000 sc-eQTL 7.44e-01 0.0333 0.102 0.785 NK_HLA L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 1.55e-01 0.137 0.0956 0.785 NK_HLA L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 6.52e-01 0.042 0.0928 0.785 NK_HLA L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 6.29e-01 0.048 0.0991 0.78 NK_cytokine L2
ENSG00000121753 ADGRB2 -859997 sc-eQTL 6.02e-01 -0.0467 0.0895 0.78 NK_cytokine L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 9.61e-01 -0.00376 0.0774 0.78 NK_cytokine L2
ENSG00000134644 PUM1 -161095 sc-eQTL 2.66e-01 0.0931 0.0834 0.78 NK_cytokine L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 4.61e-01 0.0679 0.092 0.78 NK_cytokine L2
ENSG00000162517 PEF1 -740000 sc-eQTL 7.45e-01 -0.0255 0.0785 0.78 NK_cytokine L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 9.53e-01 -0.00581 0.0976 0.78 NK_cytokine L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 1.13e-01 0.144 0.0903 0.78 NK_cytokine L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 5.10e-02 -0.219 0.111 0.778 PB L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 9.27e-01 0.012 0.131 0.778 PB L2
ENSG00000134644 PUM1 -161095 sc-eQTL 1.99e-01 0.146 0.113 0.778 PB L2
ENSG00000162510 MATN1 181311 sc-eQTL 9.10e-01 0.0121 0.106 0.778 PB L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 1.35e-01 -0.113 0.0751 0.778 PB L2
ENSG00000162517 PEF1 -740000 sc-eQTL 7.12e-01 -0.0432 0.117 0.778 PB L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 7.06e-01 -0.0393 0.104 0.778 PB L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 2.76e-01 0.12 0.11 0.778 PB L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 4.23e-01 -0.0634 0.0791 0.785 Pro_T L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 6.19e-01 -0.05 0.1 0.785 Pro_T L2
ENSG00000134644 PUM1 -161095 sc-eQTL 6.87e-01 0.0378 0.0937 0.785 Pro_T L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 3.46e-01 -0.0634 0.0671 0.785 Pro_T L2
ENSG00000162517 PEF1 -740000 sc-eQTL 5.37e-01 -0.0609 0.0986 0.785 Pro_T L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 7.81e-01 -0.0261 0.094 0.785 Pro_T L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 9.19e-01 0.00875 0.0865 0.785 Pro_T L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 4.93e-01 0.0702 0.102 0.782 Treg L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 5.53e-01 0.0588 0.0989 0.782 Treg L2
ENSG00000134644 PUM1 -161095 sc-eQTL 4.25e-01 0.0633 0.0791 0.782 Treg L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 8.27e-01 0.0199 0.0907 0.782 Treg L2
ENSG00000162517 PEF1 -740000 sc-eQTL 8.42e-03 -0.256 0.0964 0.782 Treg L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 9.71e-01 0.00337 0.0924 0.782 Treg L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 9.76e-01 0.00274 0.0923 0.782 Treg L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 3.90e-01 0.0886 0.103 0.778 cDC L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 2.50e-01 -0.128 0.111 0.778 cDC L2
ENSG00000134644 PUM1 -161095 sc-eQTL 2.01e-01 0.122 0.0954 0.778 cDC L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 5.50e-01 -0.0402 0.0671 0.778 cDC L2
ENSG00000162517 PEF1 -740000 sc-eQTL 3.47e-01 0.0915 0.097 0.778 cDC L2
ENSG00000168528 SERINC2 -504669 sc-eQTL 8.24e-02 0.149 0.0855 0.778 cDC L2
ENSG00000284543 LINC01226 -601330 sc-eQTL 4.26e-01 -0.0675 0.0846 0.778 cDC L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 4.77e-01 -0.0648 0.0911 0.778 cDC L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 2.52e-01 -0.0961 0.0837 0.782 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 6.92e-01 -0.0371 0.0936 0.782 cMono_IL1B L2
ENSG00000134644 PUM1 -161095 sc-eQTL 2.33e-01 -0.0755 0.0631 0.782 cMono_IL1B L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 7.87e-01 -0.015 0.0556 0.782 cMono_IL1B L2
ENSG00000162512 SDC3 -3862 sc-eQTL 5.57e-01 0.0616 0.105 0.782 cMono_IL1B L2
ENSG00000162517 PEF1 -740000 sc-eQTL 9.34e-01 0.00715 0.0856 0.782 cMono_IL1B L2
ENSG00000168528 SERINC2 -504669 sc-eQTL 8.33e-01 -0.0223 0.106 0.782 cMono_IL1B L2
ENSG00000284543 LINC01226 -601330 sc-eQTL 7.18e-01 -0.0339 0.0937 0.782 cMono_IL1B L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 2.71e-01 0.0962 0.0872 0.782 cMono_IL1B L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 5.71e-01 0.0497 0.0875 0.782 cMono_S100A L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 8.91e-01 -0.0141 0.104 0.782 cMono_S100A L2
ENSG00000134644 PUM1 -161095 sc-eQTL 8.17e-01 0.0174 0.0748 0.782 cMono_S100A L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 7.09e-01 0.0215 0.0575 0.782 cMono_S100A L2
ENSG00000162512 SDC3 -3862 sc-eQTL 8.91e-01 0.0136 0.0993 0.782 cMono_S100A L2
ENSG00000162517 PEF1 -740000 sc-eQTL 3.75e-01 -0.0796 0.0895 0.782 cMono_S100A L2
ENSG00000168528 SERINC2 -504669 sc-eQTL 8.93e-01 -0.0141 0.105 0.782 cMono_S100A L2
ENSG00000284543 LINC01226 -601330 sc-eQTL 4.16e-01 -0.0696 0.0853 0.782 cMono_S100A L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 8.12e-01 0.0204 0.0858 0.782 cMono_S100A L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 2.24e-01 -0.155 0.127 0.77 gdT L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 7.63e-01 0.0331 0.11 0.77 gdT L2
ENSG00000134644 PUM1 -161095 sc-eQTL 6.10e-01 -0.0577 0.113 0.77 gdT L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 6.13e-01 0.0621 0.123 0.77 gdT L2
ENSG00000162517 PEF1 -740000 sc-eQTL 2.63e-02 0.248 0.11 0.77 gdT L2
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 8.42e-01 -0.0227 0.113 0.77 gdT L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 5.49e-01 0.0658 0.11 0.77 gdT L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 7.43e-01 0.0319 0.0973 0.784 intMono L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 8.17e-02 -0.182 0.104 0.784 intMono L2
ENSG00000134644 PUM1 -161095 sc-eQTL 5.22e-01 0.0569 0.0887 0.784 intMono L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 9.36e-01 0.00563 0.0696 0.784 intMono L2
ENSG00000162512 SDC3 -3862 sc-eQTL 8.76e-01 0.0149 0.0954 0.784 intMono L2
ENSG00000162517 PEF1 -740000 sc-eQTL 3.16e-01 -0.1 0.1 0.784 intMono L2
ENSG00000168528 SERINC2 -504669 sc-eQTL 5.13e-01 0.0653 0.0997 0.784 intMono L2
ENSG00000284543 LINC01226 -601330 sc-eQTL 3.23e-01 -0.0935 0.0944 0.784 intMono L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 5.66e-01 0.0544 0.0946 0.784 intMono L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 7.92e-01 -0.0236 0.0891 0.778 ncMono L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 8.17e-01 -0.022 0.095 0.778 ncMono L2
ENSG00000134644 PUM1 -161095 sc-eQTL 3.93e-02 -0.159 0.0768 0.778 ncMono L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 7.52e-01 -0.0223 0.0705 0.778 ncMono L2
ENSG00000162512 SDC3 -3862 sc-eQTL 8.55e-01 -0.0145 0.0791 0.778 ncMono L2
ENSG00000162517 PEF1 -740000 sc-eQTL 9.99e-01 -7.09e-05 0.0907 0.778 ncMono L2
ENSG00000168528 SERINC2 -504669 sc-eQTL 2.19e-01 0.106 0.086 0.778 ncMono L2
ENSG00000284543 LINC01226 -601330 sc-eQTL 5.28e-01 -0.0544 0.0862 0.778 ncMono L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 3.79e-01 0.0787 0.0892 0.778 ncMono L2
ENSG00000060688 SNRNP40 -391892 sc-eQTL 6.37e-01 -0.0479 0.101 0.751 pDC L2
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 8.38e-01 -0.0228 0.111 0.751 pDC L2
ENSG00000134644 PUM1 -161095 sc-eQTL 2.43e-01 -0.108 0.0918 0.751 pDC L2
ENSG00000162511 LAPTM5 147122 sc-eQTL 4.28e-01 -0.068 0.0856 0.751 pDC L2
ENSG00000162517 PEF1 -740000 sc-eQTL 3.73e-01 -0.0991 0.111 0.751 pDC L2
ENSG00000168528 SERINC2 -504669 sc-eQTL 4.71e-01 0.075 0.104 0.751 pDC L2
ENSG00000284543 LINC01226 -601330 sc-eQTL 5.22e-01 0.0517 0.0806 0.751 pDC L2
ENSG00000287510 AL137857.1 173203 sc-eQTL 3.21e-01 0.0942 0.0947 0.751 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -391892 sc-eQTL 6.96e-01 -0.0414 0.106 0.782 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 4.36e-01 -0.0688 0.0881 0.782 B_Memory LOneK1K
ENSG00000134644 PUM1 -161095 sc-eQTL 1.84e-01 -0.104 0.0778 0.782 B_Memory LOneK1K
ENSG00000162510 MATN1 181311 sc-eQTL 4.74e-01 -0.0639 0.089 0.782 B_Memory LOneK1K
ENSG00000162511 LAPTM5 147122 sc-eQTL 5.98e-01 -0.0296 0.0559 0.782 B_Memory LOneK1K
ENSG00000162517 PEF1 -740000 sc-eQTL 4.01e-01 -0.078 0.0926 0.782 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 1.08e-02 -0.188 0.0729 0.782 B_Memory LOneK1K
ENSG00000287510 AL137857.1 173203 sc-eQTL 3.81e-01 -0.0707 0.0806 0.782 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -391892 sc-eQTL 8.78e-01 0.0146 0.0952 0.782 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 6.80e-01 0.031 0.0753 0.782 B_Naive LOneK1K
ENSG00000134644 PUM1 -161095 sc-eQTL 6.66e-01 0.0307 0.0712 0.782 B_Naive LOneK1K
ENSG00000162510 MATN1 181311 sc-eQTL 8.39e-02 0.118 0.0681 0.782 B_Naive LOneK1K
ENSG00000162511 LAPTM5 147122 sc-eQTL 2.09e-01 -0.0607 0.0481 0.782 B_Naive LOneK1K
ENSG00000162517 PEF1 -740000 sc-eQTL 2.18e-01 0.109 0.0879 0.782 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 2.83e-01 0.067 0.0622 0.782 B_Naive LOneK1K
ENSG00000287510 AL137857.1 173203 sc-eQTL 8.87e-01 -0.0106 0.0741 0.782 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -391892 sc-eQTL 8.01e-01 -0.02 0.0795 0.782 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 8.50e-01 -0.017 0.0901 0.782 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -161095 sc-eQTL 4.53e-01 -0.0432 0.0574 0.782 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 147122 sc-eQTL 7.68e-01 0.0149 0.0505 0.782 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -3862 sc-eQTL 5.81e-01 0.0569 0.103 0.782 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -740000 sc-eQTL 6.03e-01 -0.0377 0.0724 0.782 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -504669 sc-eQTL 8.05e-01 -0.0262 0.106 0.782 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -601330 sc-eQTL 6.99e-01 -0.0337 0.0869 0.782 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 173203 sc-eQTL 3.02e-01 0.0839 0.0812 0.782 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -391892 sc-eQTL 9.28e-01 0.00781 0.086 0.78 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 1.17e-01 -0.147 0.0935 0.78 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -161095 sc-eQTL 3.28e-01 -0.0755 0.0769 0.78 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 147122 sc-eQTL 8.47e-01 -0.0119 0.0617 0.78 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -3862 sc-eQTL 6.49e-01 -0.0411 0.09 0.78 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -740000 sc-eQTL 8.04e-01 0.0204 0.0818 0.78 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -504669 sc-eQTL 3.45e-01 0.0882 0.0932 0.78 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -601330 sc-eQTL 3.39e-01 -0.0847 0.0884 0.78 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 173203 sc-eQTL 9.71e-01 0.00318 0.0888 0.78 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -391892 sc-eQTL 7.65e-01 0.0289 0.0964 0.78 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -859997 sc-eQTL 5.08e-01 0.0544 0.082 0.78 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -392086 sc-eQTL 9.36e-01 0.00525 0.0659 0.78 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -161095 sc-eQTL 8.02e-02 0.126 0.0716 0.78 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 147122 sc-eQTL 1.34e-01 0.121 0.0802 0.78 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -740000 sc-eQTL 7.91e-01 0.0163 0.0612 0.78 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 186392 sc-eQTL 4.55e-01 0.0696 0.0929 0.78 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 173203 sc-eQTL 8.23e-01 -0.018 0.0802 0.78 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -392086 eQTL 9.05e-04 0.074 0.0222 0.0 0.0 0.193
ENSG00000142910 TINAGL1 -671589 pQTL 0.00123 -0.0619 0.0191 0.00585 0.00422 0.201
ENSG00000168528 SERINC2 -504669 eQTL 0.00106 -0.159 0.0483 0.0 0.0 0.193

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -392086 6.8e-07 4e-07 6.57e-08 3.05e-07 1.07e-07 1.71e-07 3.57e-07 7.79e-08 2.35e-07 1.28e-07 3.92e-07 2.09e-07 4.34e-07 8.55e-08 9.2e-08 1.17e-07 9.3e-08 2.83e-07 1.62e-07 8.1e-08 1.52e-07 2.3e-07 2.11e-07 7.36e-08 4.27e-07 2.2e-07 1.39e-07 1.44e-07 1.76e-07 3.3e-07 1.76e-07 4.69e-08 5.07e-08 9.09e-08 1.33e-07 4.95e-08 1.1e-07 6.97e-08 4.99e-08 7.67e-08 5.04e-08 3.06e-07 2.88e-08 6.49e-08 3.71e-08 9.44e-09 9.19e-08 0.0 4.66e-08
ENSG00000237329 \N -131838 4.11e-06 4.55e-06 3.44e-07 1.97e-06 4.38e-07 1.03e-06 2.56e-06 8.5e-07 2.61e-06 1.37e-06 3.8e-06 1.98e-06 6.07e-06 1.35e-06 8.88e-07 1.98e-06 1.55e-06 2.11e-06 1.49e-06 1.44e-06 1.36e-06 3.38e-06 2.88e-06 1.17e-06 4.64e-06 1.26e-06 1.51e-06 1.79e-06 3.18e-06 3.08e-06 1.96e-06 3.03e-07 5.18e-07 1.21e-06 1.91e-06 9.68e-07 8.38e-07 4.25e-07 1.18e-06 3.46e-07 2.88e-07 4.38e-06 4.62e-07 1.68e-07 3.48e-07 3.29e-07 8.09e-07 2.42e-07 2.32e-07