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Genes within 1Mb (chr1:30898081:A:AAC):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -398707 sc-eQTL 4.57e-01 -0.0945 0.127 0.891 B L1
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 3.53e-01 -0.0945 0.102 0.891 B L1
ENSG00000134644 PUM1 -167910 sc-eQTL 4.36e-02 0.172 0.0845 0.891 B L1
ENSG00000162510 MATN1 174496 sc-eQTL 2.46e-02 0.201 0.0887 0.891 B L1
ENSG00000162511 LAPTM5 140307 sc-eQTL 7.48e-01 -0.0226 0.0703 0.891 B L1
ENSG00000162517 PEF1 -746815 sc-eQTL 9.90e-01 0.00136 0.106 0.891 B L1
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 7.09e-01 0.0308 0.0823 0.891 B L1
ENSG00000287510 AL137857.1 166388 sc-eQTL 4.62e-01 -0.0718 0.0974 0.891 B L1
ENSG00000060688 SNRNP40 -398707 sc-eQTL 5.92e-01 0.0588 0.11 0.891 CD4T L1
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 5.48e-01 -0.0516 0.0856 0.891 CD4T L1
ENSG00000134644 PUM1 -167910 sc-eQTL 5.30e-02 0.147 0.0756 0.891 CD4T L1
ENSG00000162511 LAPTM5 140307 sc-eQTL 5.08e-02 -0.165 0.0838 0.891 CD4T L1
ENSG00000162517 PEF1 -746815 sc-eQTL 6.52e-01 0.0399 0.0884 0.891 CD4T L1
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 9.77e-01 0.00222 0.0756 0.891 CD4T L1
ENSG00000287510 AL137857.1 166388 sc-eQTL 2.74e-01 -0.0992 0.0903 0.891 CD4T L1
ENSG00000060688 SNRNP40 -398707 sc-eQTL 4.65e-01 -0.105 0.144 0.891 CD8T L1
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 1.31e-01 0.144 0.0953 0.891 CD8T L1
ENSG00000134644 PUM1 -167910 sc-eQTL 1.93e-02 0.196 0.0833 0.891 CD8T L1
ENSG00000162511 LAPTM5 140307 sc-eQTL 9.64e-02 -0.136 0.0814 0.891 CD8T L1
ENSG00000162517 PEF1 -746815 sc-eQTL 5.70e-01 -0.0573 0.101 0.891 CD8T L1
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 8.47e-01 -0.0185 0.096 0.891 CD8T L1
ENSG00000287510 AL137857.1 166388 sc-eQTL 8.94e-01 -0.0161 0.121 0.891 CD8T L1
ENSG00000060688 SNRNP40 -398707 sc-eQTL 6.44e-01 -0.0598 0.129 0.887 DC L1
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 3.23e-01 -0.151 0.153 0.887 DC L1
ENSG00000134644 PUM1 -167910 sc-eQTL 1.52e-01 -0.172 0.119 0.887 DC L1
ENSG00000162511 LAPTM5 140307 sc-eQTL 5.90e-02 -0.161 0.0849 0.887 DC L1
ENSG00000162517 PEF1 -746815 sc-eQTL 5.65e-01 -0.08 0.139 0.887 DC L1
ENSG00000168528 SERINC2 -511484 sc-eQTL 8.43e-01 -0.0279 0.141 0.887 DC L1
ENSG00000284543 LINC01226 -608145 sc-eQTL 8.72e-01 -0.0151 0.0936 0.887 DC L1
ENSG00000287510 AL137857.1 166388 sc-eQTL 7.67e-01 0.0402 0.136 0.887 DC L1
ENSG00000060688 SNRNP40 -398707 sc-eQTL 9.56e-02 -0.165 0.0984 0.891 Mono L1
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 1.96e-01 0.158 0.122 0.891 Mono L1
ENSG00000134644 PUM1 -167910 sc-eQTL 3.78e-01 0.0694 0.0785 0.891 Mono L1
ENSG00000162511 LAPTM5 140307 sc-eQTL 4.18e-01 -0.0586 0.0723 0.891 Mono L1
ENSG00000162512 SDC3 -10677 sc-eQTL 1.16e-01 -0.218 0.138 0.891 Mono L1
ENSG00000162517 PEF1 -746815 sc-eQTL 2.60e-01 -0.11 0.0973 0.891 Mono L1
ENSG00000168528 SERINC2 -511484 sc-eQTL 5.60e-01 -0.087 0.149 0.891 Mono L1
ENSG00000284543 LINC01226 -608145 sc-eQTL 5.34e-01 -0.0818 0.131 0.891 Mono L1
ENSG00000287510 AL137857.1 166388 sc-eQTL 3.30e-01 -0.112 0.115 0.891 Mono L1
ENSG00000060688 SNRNP40 -398707 sc-eQTL 6.68e-01 0.0592 0.138 0.891 NK L1
ENSG00000121753 ADGRB2 -866812 sc-eQTL 1.14e-01 0.187 0.118 0.891 NK L1
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 4.37e-01 0.0733 0.0942 0.891 NK L1
ENSG00000134644 PUM1 -167910 sc-eQTL 4.21e-03 0.281 0.097 0.891 NK L1
ENSG00000162511 LAPTM5 140307 sc-eQTL 6.40e-01 0.0532 0.114 0.891 NK L1
ENSG00000162517 PEF1 -746815 sc-eQTL 4.33e-01 -0.0652 0.083 0.891 NK L1
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 2.25e-01 -0.155 0.127 0.891 NK L1
ENSG00000287510 AL137857.1 166388 sc-eQTL 2.77e-02 -0.259 0.117 0.891 NK L1
ENSG00000060688 SNRNP40 -398707 sc-eQTL 3.53e-01 -0.0957 0.103 0.891 Other_T L1
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 3.54e-01 0.102 0.11 0.891 Other_T L1
ENSG00000134644 PUM1 -167910 sc-eQTL 2.22e-01 0.121 0.0987 0.891 Other_T L1
ENSG00000162511 LAPTM5 140307 sc-eQTL 2.83e-01 -0.0872 0.0809 0.891 Other_T L1
ENSG00000162517 PEF1 -746815 sc-eQTL 9.03e-01 -0.0132 0.108 0.891 Other_T L1
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 7.13e-01 -0.049 0.133 0.891 Other_T L1
ENSG00000287510 AL137857.1 166388 sc-eQTL 7.37e-01 -0.0465 0.138 0.891 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -398707 sc-eQTL 6.59e-01 -0.0713 0.162 0.885 B_Activated L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 2.48e-01 -0.188 0.162 0.885 B_Activated L2
ENSG00000134644 PUM1 -167910 sc-eQTL 8.51e-01 0.0285 0.151 0.885 B_Activated L2
ENSG00000162510 MATN1 174496 sc-eQTL 2.31e-01 0.158 0.132 0.885 B_Activated L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 9.03e-02 0.156 0.0916 0.885 B_Activated L2
ENSG00000162517 PEF1 -746815 sc-eQTL 3.48e-01 0.148 0.157 0.885 B_Activated L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 2.52e-03 -0.445 0.145 0.885 B_Activated L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 7.68e-01 -0.0389 0.132 0.885 B_Activated L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 7.94e-01 0.0407 0.156 0.891 B_Intermediate L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 6.11e-01 -0.0662 0.13 0.891 B_Intermediate L2
ENSG00000134644 PUM1 -167910 sc-eQTL 9.41e-01 -0.00916 0.123 0.891 B_Intermediate L2
ENSG00000162510 MATN1 174496 sc-eQTL 8.72e-01 -0.0206 0.128 0.891 B_Intermediate L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 4.13e-01 -0.0643 0.0783 0.891 B_Intermediate L2
ENSG00000162517 PEF1 -746815 sc-eQTL 6.74e-01 -0.0613 0.146 0.891 B_Intermediate L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 3.29e-01 -0.107 0.11 0.891 B_Intermediate L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 4.35e-01 -0.0961 0.123 0.891 B_Intermediate L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 4.75e-01 0.107 0.15 0.89 B_Memory L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 6.16e-01 -0.0694 0.138 0.89 B_Memory L2
ENSG00000134644 PUM1 -167910 sc-eQTL 9.72e-01 0.00424 0.12 0.89 B_Memory L2
ENSG00000162510 MATN1 174496 sc-eQTL 5.09e-01 0.076 0.115 0.89 B_Memory L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 9.20e-01 0.0102 0.102 0.89 B_Memory L2
ENSG00000162517 PEF1 -746815 sc-eQTL 1.01e-01 -0.223 0.135 0.89 B_Memory L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 8.85e-01 -0.0168 0.117 0.89 B_Memory L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 7.86e-01 0.0372 0.137 0.89 B_Memory L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 1.50e-01 -0.198 0.137 0.891 B_Naive1 L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 8.22e-01 0.0269 0.119 0.891 B_Naive1 L2
ENSG00000134644 PUM1 -167910 sc-eQTL 1.22e-02 0.261 0.103 0.891 B_Naive1 L2
ENSG00000162510 MATN1 174496 sc-eQTL 9.39e-02 0.178 0.106 0.891 B_Naive1 L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 4.71e-01 -0.0513 0.071 0.891 B_Naive1 L2
ENSG00000162517 PEF1 -746815 sc-eQTL 2.10e-01 0.157 0.125 0.891 B_Naive1 L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 3.02e-01 0.0964 0.0932 0.891 B_Naive1 L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 8.12e-01 0.0275 0.115 0.891 B_Naive1 L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 4.77e-01 -0.105 0.147 0.891 B_Naive2 L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 3.96e-01 -0.103 0.122 0.891 B_Naive2 L2
ENSG00000134644 PUM1 -167910 sc-eQTL 4.32e-02 0.24 0.118 0.891 B_Naive2 L2
ENSG00000162510 MATN1 174496 sc-eQTL 5.97e-01 0.0605 0.114 0.891 B_Naive2 L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 4.61e-01 -0.0573 0.0776 0.891 B_Naive2 L2
ENSG00000162517 PEF1 -746815 sc-eQTL 6.09e-01 -0.0725 0.141 0.891 B_Naive2 L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 8.86e-01 -0.0163 0.113 0.891 B_Naive2 L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 7.20e-01 0.0439 0.122 0.891 B_Naive2 L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 5.12e-01 -0.0983 0.15 0.891 CD4_CTL L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 3.55e-01 0.136 0.147 0.891 CD4_CTL L2
ENSG00000134644 PUM1 -167910 sc-eQTL 5.92e-01 0.0776 0.144 0.891 CD4_CTL L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 8.43e-01 -0.0255 0.129 0.891 CD4_CTL L2
ENSG00000162517 PEF1 -746815 sc-eQTL 1.29e-02 -0.326 0.13 0.891 CD4_CTL L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 3.97e-01 0.119 0.141 0.891 CD4_CTL L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 7.25e-01 -0.0439 0.124 0.891 CD4_CTL L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 7.94e-01 0.0301 0.115 0.891 CD4_Naive L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 8.37e-01 -0.021 0.102 0.891 CD4_Naive L2
ENSG00000134644 PUM1 -167910 sc-eQTL 8.85e-02 0.139 0.081 0.891 CD4_Naive L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 6.04e-02 -0.164 0.0866 0.891 CD4_Naive L2
ENSG00000162517 PEF1 -746815 sc-eQTL 4.99e-01 0.0649 0.0957 0.891 CD4_Naive L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 8.42e-01 -0.0177 0.0886 0.891 CD4_Naive L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 7.89e-01 -0.0273 0.102 0.891 CD4_Naive L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 5.28e-01 0.0914 0.145 0.891 CD4_TCM L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 9.26e-01 0.0108 0.117 0.891 CD4_TCM L2
ENSG00000134644 PUM1 -167910 sc-eQTL 2.66e-01 0.115 0.103 0.891 CD4_TCM L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 3.62e-01 -0.0782 0.0855 0.891 CD4_TCM L2
ENSG00000162517 PEF1 -746815 sc-eQTL 7.10e-01 0.0428 0.115 0.891 CD4_TCM L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 1.42e-01 0.159 0.108 0.891 CD4_TCM L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 2.34e-01 -0.144 0.121 0.891 CD4_TCM L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 1.18e-01 0.225 0.143 0.891 CD4_TEM L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 6.32e-01 -0.0659 0.137 0.891 CD4_TEM L2
ENSG00000134644 PUM1 -167910 sc-eQTL 9.65e-01 -0.00501 0.114 0.891 CD4_TEM L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 5.12e-01 -0.076 0.116 0.891 CD4_TEM L2
ENSG00000162517 PEF1 -746815 sc-eQTL 2.89e-01 0.138 0.129 0.891 CD4_TEM L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 4.90e-02 -0.266 0.134 0.891 CD4_TEM L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 3.12e-01 -0.135 0.133 0.891 CD4_TEM L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 2.15e-01 -0.193 0.155 0.891 CD8_CTL L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 5.10e-01 0.0788 0.119 0.891 CD8_CTL L2
ENSG00000134644 PUM1 -167910 sc-eQTL 2.04e-01 0.147 0.116 0.891 CD8_CTL L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 7.42e-01 -0.0424 0.128 0.891 CD8_CTL L2
ENSG00000162517 PEF1 -746815 sc-eQTL 6.37e-01 0.0528 0.112 0.891 CD8_CTL L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 1.59e-01 -0.19 0.134 0.891 CD8_CTL L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 8.63e-01 -0.0219 0.127 0.891 CD8_CTL L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 7.18e-01 -0.0515 0.142 0.891 CD8_Naive L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 9.58e-02 0.204 0.122 0.891 CD8_Naive L2
ENSG00000134644 PUM1 -167910 sc-eQTL 2.98e-01 0.103 0.0987 0.891 CD8_Naive L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 2.83e-01 -0.102 0.0945 0.891 CD8_Naive L2
ENSG00000162517 PEF1 -746815 sc-eQTL 1.50e-01 -0.189 0.131 0.891 CD8_Naive L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 5.22e-01 0.0757 0.118 0.891 CD8_Naive L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 6.30e-01 0.0621 0.129 0.891 CD8_Naive L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 1.53e-01 0.227 0.158 0.887 CD8_TCM L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 6.31e-01 -0.0703 0.146 0.887 CD8_TCM L2
ENSG00000134644 PUM1 -167910 sc-eQTL 1.02e-02 0.35 0.135 0.887 CD8_TCM L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 7.62e-01 -0.0435 0.144 0.887 CD8_TCM L2
ENSG00000162517 PEF1 -746815 sc-eQTL 7.39e-01 0.049 0.147 0.887 CD8_TCM L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 9.34e-01 -0.011 0.133 0.887 CD8_TCM L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 5.87e-01 0.073 0.134 0.887 CD8_TCM L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 8.05e-01 -0.0383 0.155 0.89 CD8_TEM L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 3.57e-02 -0.311 0.147 0.89 CD8_TEM L2
ENSG00000134644 PUM1 -167910 sc-eQTL 4.70e-01 0.11 0.152 0.89 CD8_TEM L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 5.57e-01 -0.0841 0.143 0.89 CD8_TEM L2
ENSG00000162517 PEF1 -746815 sc-eQTL 1.52e-01 -0.193 0.134 0.89 CD8_TEM L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 7.46e-01 0.0482 0.148 0.89 CD8_TEM L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 4.70e-01 -0.0971 0.134 0.89 CD8_TEM L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 2.60e-01 -0.173 0.153 0.892 MAIT L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 5.01e-01 0.0918 0.136 0.892 MAIT L2
ENSG00000134644 PUM1 -167910 sc-eQTL 3.52e-01 0.122 0.13 0.892 MAIT L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 3.93e-01 -0.105 0.123 0.892 MAIT L2
ENSG00000162517 PEF1 -746815 sc-eQTL 8.00e-01 -0.0344 0.135 0.892 MAIT L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 4.98e-01 -0.093 0.137 0.892 MAIT L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 6.69e-01 0.0604 0.141 0.892 MAIT L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 8.07e-01 0.0385 0.157 0.891 NK_CD56bright L2
ENSG00000121753 ADGRB2 -866812 sc-eQTL 7.86e-01 -0.0334 0.123 0.891 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 5.00e-01 0.0894 0.132 0.891 NK_CD56bright L2
ENSG00000134644 PUM1 -167910 sc-eQTL 2.22e-01 -0.17 0.139 0.891 NK_CD56bright L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 8.47e-01 -0.0265 0.137 0.891 NK_CD56bright L2
ENSG00000162517 PEF1 -746815 sc-eQTL 1.89e-01 0.175 0.133 0.891 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 3.76e-01 0.122 0.138 0.891 NK_CD56bright L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 5.87e-01 -0.0738 0.136 0.891 NK_CD56bright L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 3.59e-01 0.133 0.144 0.89 NK_CD56dim L2
ENSG00000121753 ADGRB2 -866812 sc-eQTL 1.14e-01 0.201 0.126 0.89 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 2.80e-01 0.115 0.107 0.89 NK_CD56dim L2
ENSG00000134644 PUM1 -167910 sc-eQTL 5.83e-03 0.3 0.108 0.89 NK_CD56dim L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 7.43e-01 0.0383 0.117 0.89 NK_CD56dim L2
ENSG00000162517 PEF1 -746815 sc-eQTL 8.00e-01 -0.0265 0.104 0.89 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 8.61e-01 -0.0256 0.147 0.89 NK_CD56dim L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 1.02e-02 -0.309 0.119 0.89 NK_CD56dim L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 9.42e-01 0.0117 0.161 0.893 NK_HLA L2
ENSG00000121753 ADGRB2 -866812 sc-eQTL 3.67e-01 0.116 0.128 0.893 NK_HLA L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 1.53e-01 0.205 0.143 0.893 NK_HLA L2
ENSG00000134644 PUM1 -167910 sc-eQTL 8.60e-01 -0.0249 0.14 0.893 NK_HLA L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 4.38e-01 -0.104 0.134 0.893 NK_HLA L2
ENSG00000162517 PEF1 -746815 sc-eQTL 3.69e-01 -0.136 0.151 0.893 NK_HLA L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 8.11e-01 0.0341 0.143 0.893 NK_HLA L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 4.79e-01 -0.0977 0.138 0.893 NK_HLA L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 3.57e-01 -0.131 0.142 0.89 NK_cytokine L2
ENSG00000121753 ADGRB2 -866812 sc-eQTL 9.74e-01 0.00425 0.129 0.89 NK_cytokine L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 7.78e-01 0.0314 0.111 0.89 NK_cytokine L2
ENSG00000134644 PUM1 -167910 sc-eQTL 2.27e-02 0.273 0.119 0.89 NK_cytokine L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 4.49e-01 0.1 0.132 0.89 NK_cytokine L2
ENSG00000162517 PEF1 -746815 sc-eQTL 6.74e-01 -0.0475 0.113 0.89 NK_cytokine L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 9.88e-02 -0.231 0.139 0.89 NK_cytokine L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 7.06e-01 0.0492 0.131 0.89 NK_cytokine L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 9.55e-01 -0.0104 0.182 0.904 PB L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 3.04e-01 -0.217 0.21 0.904 PB L2
ENSG00000134644 PUM1 -167910 sc-eQTL 6.90e-01 -0.0733 0.183 0.904 PB L2
ENSG00000162510 MATN1 174496 sc-eQTL 8.17e-01 0.0397 0.171 0.904 PB L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 5.34e-01 0.076 0.122 0.904 PB L2
ENSG00000162517 PEF1 -746815 sc-eQTL 8.97e-03 -0.485 0.182 0.904 PB L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 5.46e-01 0.101 0.167 0.904 PB L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 3.63e-01 0.162 0.177 0.904 PB L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 2.08e-01 -0.141 0.112 0.889 Pro_T L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 3.40e-01 0.136 0.142 0.889 Pro_T L2
ENSG00000134644 PUM1 -167910 sc-eQTL 8.73e-01 -0.0213 0.133 0.889 Pro_T L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 5.37e-01 -0.0589 0.0951 0.889 Pro_T L2
ENSG00000162517 PEF1 -746815 sc-eQTL 6.12e-01 -0.0709 0.14 0.889 Pro_T L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 9.00e-01 -0.0168 0.133 0.889 Pro_T L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 9.09e-01 0.014 0.122 0.889 Pro_T L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 9.04e-02 -0.252 0.148 0.891 Treg L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 8.92e-01 -0.0197 0.144 0.891 Treg L2
ENSG00000134644 PUM1 -167910 sc-eQTL 1.31e-01 0.174 0.115 0.891 Treg L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 7.40e-01 -0.0439 0.132 0.891 Treg L2
ENSG00000162517 PEF1 -746815 sc-eQTL 5.26e-02 -0.276 0.142 0.891 Treg L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 2.48e-01 0.156 0.134 0.891 Treg L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 7.37e-01 -0.0452 0.135 0.891 Treg L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 8.52e-01 0.0278 0.149 0.89 cDC L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 1.03e-01 -0.263 0.16 0.89 cDC L2
ENSG00000134644 PUM1 -167910 sc-eQTL 4.60e-01 -0.102 0.138 0.89 cDC L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 7.43e-02 -0.173 0.0963 0.89 cDC L2
ENSG00000162517 PEF1 -746815 sc-eQTL 9.76e-01 0.00417 0.141 0.89 cDC L2
ENSG00000168528 SERINC2 -511484 sc-eQTL 4.77e-01 -0.0889 0.125 0.89 cDC L2
ENSG00000284543 LINC01226 -608145 sc-eQTL 2.22e-01 -0.149 0.122 0.89 cDC L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 6.23e-01 0.065 0.132 0.89 cDC L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 2.76e-02 -0.261 0.118 0.891 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 2.84e-01 0.142 0.132 0.891 cMono_IL1B L2
ENSG00000134644 PUM1 -167910 sc-eQTL 7.19e-01 0.0324 0.0898 0.891 cMono_IL1B L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 3.74e-01 -0.07 0.0787 0.891 cMono_IL1B L2
ENSG00000162512 SDC3 -10677 sc-eQTL 4.93e-01 -0.102 0.148 0.891 cMono_IL1B L2
ENSG00000162517 PEF1 -746815 sc-eQTL 1.18e-01 -0.189 0.121 0.891 cMono_IL1B L2
ENSG00000168528 SERINC2 -511484 sc-eQTL 4.63e-01 -0.11 0.15 0.891 cMono_IL1B L2
ENSG00000284543 LINC01226 -608145 sc-eQTL 6.35e-01 -0.0632 0.133 0.891 cMono_IL1B L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 3.60e-01 -0.113 0.124 0.891 cMono_IL1B L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 3.42e-01 0.119 0.125 0.891 cMono_S100A L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 8.75e-01 -0.0234 0.148 0.891 cMono_S100A L2
ENSG00000134644 PUM1 -167910 sc-eQTL 5.09e-01 0.0708 0.107 0.891 cMono_S100A L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 4.70e-01 -0.0595 0.0822 0.891 cMono_S100A L2
ENSG00000162512 SDC3 -10677 sc-eQTL 9.68e-01 -0.00567 0.142 0.891 cMono_S100A L2
ENSG00000162517 PEF1 -746815 sc-eQTL 4.57e-01 -0.0956 0.128 0.891 cMono_S100A L2
ENSG00000168528 SERINC2 -511484 sc-eQTL 5.13e-01 -0.0986 0.15 0.891 cMono_S100A L2
ENSG00000284543 LINC01226 -608145 sc-eQTL 8.84e-01 -0.0179 0.122 0.891 cMono_S100A L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 8.36e-01 -0.0255 0.123 0.891 cMono_S100A L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 2.29e-01 -0.207 0.171 0.873 gdT L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 9.06e-01 0.0175 0.148 0.873 gdT L2
ENSG00000134644 PUM1 -167910 sc-eQTL 8.56e-01 0.0276 0.152 0.873 gdT L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 7.91e-01 -0.044 0.166 0.873 gdT L2
ENSG00000162517 PEF1 -746815 sc-eQTL 4.68e-01 -0.11 0.151 0.873 gdT L2
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 7.10e-01 -0.057 0.153 0.873 gdT L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 3.48e-01 0.139 0.148 0.873 gdT L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 5.26e-02 -0.272 0.139 0.891 intMono L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 4.68e-01 -0.11 0.151 0.891 intMono L2
ENSG00000134644 PUM1 -167910 sc-eQTL 2.01e-02 0.297 0.127 0.891 intMono L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 9.18e-01 0.0103 0.101 0.891 intMono L2
ENSG00000162512 SDC3 -10677 sc-eQTL 2.83e-02 -0.301 0.136 0.891 intMono L2
ENSG00000162517 PEF1 -746815 sc-eQTL 7.31e-01 -0.05 0.145 0.891 intMono L2
ENSG00000168528 SERINC2 -511484 sc-eQTL 3.98e-01 -0.122 0.144 0.891 intMono L2
ENSG00000284543 LINC01226 -608145 sc-eQTL 9.12e-01 -0.0152 0.137 0.891 intMono L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 5.61e-03 -0.376 0.134 0.891 intMono L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 2.73e-01 -0.141 0.128 0.889 ncMono L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 2.74e-02 0.301 0.136 0.889 ncMono L2
ENSG00000134644 PUM1 -167910 sc-eQTL 5.40e-01 -0.0688 0.112 0.889 ncMono L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 5.48e-01 0.0613 0.102 0.889 ncMono L2
ENSG00000162512 SDC3 -10677 sc-eQTL 7.22e-01 -0.0407 0.114 0.889 ncMono L2
ENSG00000162517 PEF1 -746815 sc-eQTL 5.27e-01 0.083 0.131 0.889 ncMono L2
ENSG00000168528 SERINC2 -511484 sc-eQTL 8.24e-01 -0.0278 0.125 0.889 ncMono L2
ENSG00000284543 LINC01226 -608145 sc-eQTL 1.30e-02 -0.307 0.123 0.889 ncMono L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 3.18e-01 -0.129 0.129 0.889 ncMono L2
ENSG00000060688 SNRNP40 -398707 sc-eQTL 8.05e-01 -0.0369 0.149 0.876 pDC L2
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 7.71e-01 0.0476 0.163 0.876 pDC L2
ENSG00000134644 PUM1 -167910 sc-eQTL 4.61e-01 0.0999 0.135 0.876 pDC L2
ENSG00000162511 LAPTM5 140307 sc-eQTL 3.72e-01 -0.112 0.125 0.876 pDC L2
ENSG00000162517 PEF1 -746815 sc-eQTL 3.64e-01 -0.148 0.163 0.876 pDC L2
ENSG00000168528 SERINC2 -511484 sc-eQTL 8.05e-01 0.0378 0.153 0.876 pDC L2
ENSG00000284543 LINC01226 -608145 sc-eQTL 7.15e-01 0.0434 0.118 0.876 pDC L2
ENSG00000287510 AL137857.1 166388 sc-eQTL 2.09e-01 -0.175 0.139 0.876 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -398707 sc-eQTL 4.60e-01 0.11 0.149 0.891 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 1.72e-01 -0.17 0.124 0.891 B_Memory LOneK1K
ENSG00000134644 PUM1 -167910 sc-eQTL 6.25e-01 -0.054 0.11 0.891 B_Memory LOneK1K
ENSG00000162510 MATN1 174496 sc-eQTL 3.77e-01 0.111 0.125 0.891 B_Memory LOneK1K
ENSG00000162511 LAPTM5 140307 sc-eQTL 6.21e-01 -0.0391 0.0789 0.891 B_Memory LOneK1K
ENSG00000162517 PEF1 -746815 sc-eQTL 5.73e-01 -0.0738 0.131 0.891 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 7.78e-02 -0.184 0.104 0.891 B_Memory LOneK1K
ENSG00000287510 AL137857.1 166388 sc-eQTL 2.29e-01 -0.137 0.113 0.891 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -398707 sc-eQTL 2.01e-01 -0.172 0.134 0.891 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 7.09e-01 -0.0398 0.107 0.891 B_Naive LOneK1K
ENSG00000134644 PUM1 -167910 sc-eQTL 2.49e-02 0.225 0.0997 0.891 B_Naive LOneK1K
ENSG00000162510 MATN1 174496 sc-eQTL 2.42e-02 0.218 0.096 0.891 B_Naive LOneK1K
ENSG00000162511 LAPTM5 140307 sc-eQTL 3.36e-01 -0.0658 0.0682 0.891 B_Naive LOneK1K
ENSG00000162517 PEF1 -746815 sc-eQTL 2.74e-01 0.137 0.125 0.891 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 1.18e-01 0.138 0.0878 0.891 B_Naive LOneK1K
ENSG00000287510 AL137857.1 166388 sc-eQTL 9.57e-01 -0.00573 0.105 0.891 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -398707 sc-eQTL 3.18e-01 -0.113 0.113 0.891 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 3.55e-01 0.119 0.128 0.891 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -167910 sc-eQTL 5.83e-01 0.045 0.0817 0.891 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 140307 sc-eQTL 2.60e-01 -0.081 0.0717 0.891 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -10677 sc-eQTL 5.90e-01 -0.0791 0.147 0.891 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -746815 sc-eQTL 1.21e-01 -0.16 0.103 0.891 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -511484 sc-eQTL 5.52e-01 -0.0899 0.151 0.891 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -608145 sc-eQTL 6.13e-01 -0.0627 0.124 0.891 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 166388 sc-eQTL 5.37e-01 -0.0716 0.116 0.891 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -398707 sc-eQTL 1.87e-01 -0.163 0.123 0.89 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 2.80e-01 0.146 0.135 0.89 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -167910 sc-eQTL 2.40e-01 0.13 0.111 0.89 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 140307 sc-eQTL 7.23e-01 0.0315 0.0887 0.89 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -10677 sc-eQTL 9.16e-02 -0.218 0.129 0.89 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -746815 sc-eQTL 8.02e-01 0.0295 0.118 0.89 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -511484 sc-eQTL 6.15e-01 -0.0677 0.134 0.89 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -608145 sc-eQTL 1.24e-01 -0.196 0.127 0.89 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 166388 sc-eQTL 8.45e-02 -0.22 0.127 0.89 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -398707 sc-eQTL 8.09e-01 0.0335 0.138 0.89 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -866812 sc-eQTL 9.95e-02 0.194 0.117 0.89 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -398901 sc-eQTL 5.50e-01 0.0565 0.0944 0.89 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -167910 sc-eQTL 1.58e-03 0.324 0.101 0.89 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 140307 sc-eQTL 5.76e-01 0.0648 0.116 0.89 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -746815 sc-eQTL 4.41e-01 -0.0677 0.0877 0.89 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 179577 sc-eQTL 1.51e-01 -0.191 0.133 0.89 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 166388 sc-eQTL 2.15e-02 -0.263 0.114 0.89 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000168528 SERINC2 -511484 eQTL 0.0174 -0.168 0.0706 0.0 0.0 0.0868

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000237329 \N -138653 2.02e-05 1.99e-05 4.95e-06 1.15e-05 3.33e-06 7.14e-06 2.59e-05 2.13e-06 1.81e-05 6.99e-06 3.05e-05 9.35e-06 3.72e-05 4.33e-06 5.53e-06 1.15e-05 7.72e-06 9.99e-06 5.04e-06 4.88e-06 6.9e-06 3.82e-05 2.55e-05 6.12e-06 2.69e-05 4.34e-06 7.74e-06 4.97e-06 1.79e-05 1.18e-05 1.11e-05 1.24e-06 2.29e-06 4.87e-06 1.08e-05 3.03e-06 1.91e-06 2.38e-06 4.16e-06 3.75e-06 1.71e-06 3.25e-05 3.13e-06 3.99e-07 2.07e-06 5.28e-06 2.48e-06 2.27e-06 1.27e-06