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Genes within 1Mb (chr1:30898076:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -398712 sc-eQTL 4.57e-01 -0.0945 0.127 0.891 B L1
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 3.53e-01 -0.0945 0.102 0.891 B L1
ENSG00000134644 PUM1 -167915 sc-eQTL 4.36e-02 0.172 0.0845 0.891 B L1
ENSG00000162510 MATN1 174491 sc-eQTL 2.46e-02 0.201 0.0887 0.891 B L1
ENSG00000162511 LAPTM5 140302 sc-eQTL 7.48e-01 -0.0226 0.0703 0.891 B L1
ENSG00000162517 PEF1 -746820 sc-eQTL 9.90e-01 0.00136 0.106 0.891 B L1
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 7.09e-01 0.0308 0.0823 0.891 B L1
ENSG00000287510 AL137857.1 166383 sc-eQTL 4.62e-01 -0.0718 0.0974 0.891 B L1
ENSG00000060688 SNRNP40 -398712 sc-eQTL 5.92e-01 0.0588 0.11 0.891 CD4T L1
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 5.48e-01 -0.0516 0.0856 0.891 CD4T L1
ENSG00000134644 PUM1 -167915 sc-eQTL 5.30e-02 0.147 0.0756 0.891 CD4T L1
ENSG00000162511 LAPTM5 140302 sc-eQTL 5.08e-02 -0.165 0.0838 0.891 CD4T L1
ENSG00000162517 PEF1 -746820 sc-eQTL 6.52e-01 0.0399 0.0884 0.891 CD4T L1
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 9.77e-01 0.00222 0.0756 0.891 CD4T L1
ENSG00000287510 AL137857.1 166383 sc-eQTL 2.74e-01 -0.0992 0.0903 0.891 CD4T L1
ENSG00000060688 SNRNP40 -398712 sc-eQTL 4.65e-01 -0.105 0.144 0.891 CD8T L1
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 1.31e-01 0.144 0.0953 0.891 CD8T L1
ENSG00000134644 PUM1 -167915 sc-eQTL 1.93e-02 0.196 0.0833 0.891 CD8T L1
ENSG00000162511 LAPTM5 140302 sc-eQTL 9.64e-02 -0.136 0.0814 0.891 CD8T L1
ENSG00000162517 PEF1 -746820 sc-eQTL 5.70e-01 -0.0573 0.101 0.891 CD8T L1
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 8.47e-01 -0.0185 0.096 0.891 CD8T L1
ENSG00000287510 AL137857.1 166383 sc-eQTL 8.94e-01 -0.0161 0.121 0.891 CD8T L1
ENSG00000060688 SNRNP40 -398712 sc-eQTL 6.44e-01 -0.0598 0.129 0.887 DC L1
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 3.23e-01 -0.151 0.153 0.887 DC L1
ENSG00000134644 PUM1 -167915 sc-eQTL 1.52e-01 -0.172 0.119 0.887 DC L1
ENSG00000162511 LAPTM5 140302 sc-eQTL 5.90e-02 -0.161 0.0849 0.887 DC L1
ENSG00000162517 PEF1 -746820 sc-eQTL 5.65e-01 -0.08 0.139 0.887 DC L1
ENSG00000168528 SERINC2 -511489 sc-eQTL 8.43e-01 -0.0279 0.141 0.887 DC L1
ENSG00000284543 LINC01226 -608150 sc-eQTL 8.72e-01 -0.0151 0.0936 0.887 DC L1
ENSG00000287510 AL137857.1 166383 sc-eQTL 7.67e-01 0.0402 0.136 0.887 DC L1
ENSG00000060688 SNRNP40 -398712 sc-eQTL 9.56e-02 -0.165 0.0984 0.891 Mono L1
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 1.96e-01 0.158 0.122 0.891 Mono L1
ENSG00000134644 PUM1 -167915 sc-eQTL 3.78e-01 0.0694 0.0785 0.891 Mono L1
ENSG00000162511 LAPTM5 140302 sc-eQTL 4.18e-01 -0.0586 0.0723 0.891 Mono L1
ENSG00000162512 SDC3 -10682 sc-eQTL 1.16e-01 -0.218 0.138 0.891 Mono L1
ENSG00000162517 PEF1 -746820 sc-eQTL 2.60e-01 -0.11 0.0973 0.891 Mono L1
ENSG00000168528 SERINC2 -511489 sc-eQTL 5.60e-01 -0.087 0.149 0.891 Mono L1
ENSG00000284543 LINC01226 -608150 sc-eQTL 5.34e-01 -0.0818 0.131 0.891 Mono L1
ENSG00000287510 AL137857.1 166383 sc-eQTL 3.30e-01 -0.112 0.115 0.891 Mono L1
ENSG00000060688 SNRNP40 -398712 sc-eQTL 6.68e-01 0.0592 0.138 0.891 NK L1
ENSG00000121753 ADGRB2 -866817 sc-eQTL 1.14e-01 0.187 0.118 0.891 NK L1
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 4.37e-01 0.0733 0.0942 0.891 NK L1
ENSG00000134644 PUM1 -167915 sc-eQTL 4.21e-03 0.281 0.097 0.891 NK L1
ENSG00000162511 LAPTM5 140302 sc-eQTL 6.40e-01 0.0532 0.114 0.891 NK L1
ENSG00000162517 PEF1 -746820 sc-eQTL 4.33e-01 -0.0652 0.083 0.891 NK L1
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 2.25e-01 -0.155 0.127 0.891 NK L1
ENSG00000287510 AL137857.1 166383 sc-eQTL 2.77e-02 -0.259 0.117 0.891 NK L1
ENSG00000060688 SNRNP40 -398712 sc-eQTL 3.53e-01 -0.0957 0.103 0.891 Other_T L1
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 3.54e-01 0.102 0.11 0.891 Other_T L1
ENSG00000134644 PUM1 -167915 sc-eQTL 2.22e-01 0.121 0.0987 0.891 Other_T L1
ENSG00000162511 LAPTM5 140302 sc-eQTL 2.83e-01 -0.0872 0.0809 0.891 Other_T L1
ENSG00000162517 PEF1 -746820 sc-eQTL 9.03e-01 -0.0132 0.108 0.891 Other_T L1
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 7.13e-01 -0.049 0.133 0.891 Other_T L1
ENSG00000287510 AL137857.1 166383 sc-eQTL 7.37e-01 -0.0465 0.138 0.891 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -398712 sc-eQTL 6.59e-01 -0.0713 0.162 0.885 B_Activated L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 2.48e-01 -0.188 0.162 0.885 B_Activated L2
ENSG00000134644 PUM1 -167915 sc-eQTL 8.51e-01 0.0285 0.151 0.885 B_Activated L2
ENSG00000162510 MATN1 174491 sc-eQTL 2.31e-01 0.158 0.132 0.885 B_Activated L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 9.03e-02 0.156 0.0916 0.885 B_Activated L2
ENSG00000162517 PEF1 -746820 sc-eQTL 3.48e-01 0.148 0.157 0.885 B_Activated L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 2.52e-03 -0.445 0.145 0.885 B_Activated L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 7.68e-01 -0.0389 0.132 0.885 B_Activated L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 7.94e-01 0.0407 0.156 0.891 B_Intermediate L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 6.11e-01 -0.0662 0.13 0.891 B_Intermediate L2
ENSG00000134644 PUM1 -167915 sc-eQTL 9.41e-01 -0.00916 0.123 0.891 B_Intermediate L2
ENSG00000162510 MATN1 174491 sc-eQTL 8.72e-01 -0.0206 0.128 0.891 B_Intermediate L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 4.13e-01 -0.0643 0.0783 0.891 B_Intermediate L2
ENSG00000162517 PEF1 -746820 sc-eQTL 6.74e-01 -0.0613 0.146 0.891 B_Intermediate L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 3.29e-01 -0.107 0.11 0.891 B_Intermediate L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 4.35e-01 -0.0961 0.123 0.891 B_Intermediate L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 4.75e-01 0.107 0.15 0.89 B_Memory L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 6.16e-01 -0.0694 0.138 0.89 B_Memory L2
ENSG00000134644 PUM1 -167915 sc-eQTL 9.72e-01 0.00424 0.12 0.89 B_Memory L2
ENSG00000162510 MATN1 174491 sc-eQTL 5.09e-01 0.076 0.115 0.89 B_Memory L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 9.20e-01 0.0102 0.102 0.89 B_Memory L2
ENSG00000162517 PEF1 -746820 sc-eQTL 1.01e-01 -0.223 0.135 0.89 B_Memory L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 8.85e-01 -0.0168 0.117 0.89 B_Memory L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 7.86e-01 0.0372 0.137 0.89 B_Memory L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 1.50e-01 -0.198 0.137 0.891 B_Naive1 L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 8.22e-01 0.0269 0.119 0.891 B_Naive1 L2
ENSG00000134644 PUM1 -167915 sc-eQTL 1.22e-02 0.261 0.103 0.891 B_Naive1 L2
ENSG00000162510 MATN1 174491 sc-eQTL 9.39e-02 0.178 0.106 0.891 B_Naive1 L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 4.71e-01 -0.0513 0.071 0.891 B_Naive1 L2
ENSG00000162517 PEF1 -746820 sc-eQTL 2.10e-01 0.157 0.125 0.891 B_Naive1 L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 3.02e-01 0.0964 0.0932 0.891 B_Naive1 L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 8.12e-01 0.0275 0.115 0.891 B_Naive1 L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 4.77e-01 -0.105 0.147 0.891 B_Naive2 L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 3.96e-01 -0.103 0.122 0.891 B_Naive2 L2
ENSG00000134644 PUM1 -167915 sc-eQTL 4.32e-02 0.24 0.118 0.891 B_Naive2 L2
ENSG00000162510 MATN1 174491 sc-eQTL 5.97e-01 0.0605 0.114 0.891 B_Naive2 L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 4.61e-01 -0.0573 0.0776 0.891 B_Naive2 L2
ENSG00000162517 PEF1 -746820 sc-eQTL 6.09e-01 -0.0725 0.141 0.891 B_Naive2 L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 8.86e-01 -0.0163 0.113 0.891 B_Naive2 L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 7.20e-01 0.0439 0.122 0.891 B_Naive2 L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 5.12e-01 -0.0983 0.15 0.891 CD4_CTL L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 3.55e-01 0.136 0.147 0.891 CD4_CTL L2
ENSG00000134644 PUM1 -167915 sc-eQTL 5.92e-01 0.0776 0.144 0.891 CD4_CTL L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 8.43e-01 -0.0255 0.129 0.891 CD4_CTL L2
ENSG00000162517 PEF1 -746820 sc-eQTL 1.29e-02 -0.326 0.13 0.891 CD4_CTL L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 3.97e-01 0.119 0.141 0.891 CD4_CTL L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 7.25e-01 -0.0439 0.124 0.891 CD4_CTL L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 7.94e-01 0.0301 0.115 0.891 CD4_Naive L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 8.37e-01 -0.021 0.102 0.891 CD4_Naive L2
ENSG00000134644 PUM1 -167915 sc-eQTL 8.85e-02 0.139 0.081 0.891 CD4_Naive L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 6.04e-02 -0.164 0.0866 0.891 CD4_Naive L2
ENSG00000162517 PEF1 -746820 sc-eQTL 4.99e-01 0.0649 0.0957 0.891 CD4_Naive L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 8.42e-01 -0.0177 0.0886 0.891 CD4_Naive L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 7.89e-01 -0.0273 0.102 0.891 CD4_Naive L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 5.28e-01 0.0914 0.145 0.891 CD4_TCM L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 9.26e-01 0.0108 0.117 0.891 CD4_TCM L2
ENSG00000134644 PUM1 -167915 sc-eQTL 2.66e-01 0.115 0.103 0.891 CD4_TCM L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 3.62e-01 -0.0782 0.0855 0.891 CD4_TCM L2
ENSG00000162517 PEF1 -746820 sc-eQTL 7.10e-01 0.0428 0.115 0.891 CD4_TCM L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 1.42e-01 0.159 0.108 0.891 CD4_TCM L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 2.34e-01 -0.144 0.121 0.891 CD4_TCM L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 1.18e-01 0.225 0.143 0.891 CD4_TEM L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 6.32e-01 -0.0659 0.137 0.891 CD4_TEM L2
ENSG00000134644 PUM1 -167915 sc-eQTL 9.65e-01 -0.00501 0.114 0.891 CD4_TEM L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 5.12e-01 -0.076 0.116 0.891 CD4_TEM L2
ENSG00000162517 PEF1 -746820 sc-eQTL 2.89e-01 0.138 0.129 0.891 CD4_TEM L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 4.90e-02 -0.266 0.134 0.891 CD4_TEM L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 3.12e-01 -0.135 0.133 0.891 CD4_TEM L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 2.15e-01 -0.193 0.155 0.891 CD8_CTL L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 5.10e-01 0.0788 0.119 0.891 CD8_CTL L2
ENSG00000134644 PUM1 -167915 sc-eQTL 2.04e-01 0.147 0.116 0.891 CD8_CTL L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 7.42e-01 -0.0424 0.128 0.891 CD8_CTL L2
ENSG00000162517 PEF1 -746820 sc-eQTL 6.37e-01 0.0528 0.112 0.891 CD8_CTL L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 1.59e-01 -0.19 0.134 0.891 CD8_CTL L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 8.63e-01 -0.0219 0.127 0.891 CD8_CTL L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 7.18e-01 -0.0515 0.142 0.891 CD8_Naive L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 9.58e-02 0.204 0.122 0.891 CD8_Naive L2
ENSG00000134644 PUM1 -167915 sc-eQTL 2.98e-01 0.103 0.0987 0.891 CD8_Naive L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 2.83e-01 -0.102 0.0945 0.891 CD8_Naive L2
ENSG00000162517 PEF1 -746820 sc-eQTL 1.50e-01 -0.189 0.131 0.891 CD8_Naive L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 5.22e-01 0.0757 0.118 0.891 CD8_Naive L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 6.30e-01 0.0621 0.129 0.891 CD8_Naive L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 1.53e-01 0.227 0.158 0.887 CD8_TCM L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 6.31e-01 -0.0703 0.146 0.887 CD8_TCM L2
ENSG00000134644 PUM1 -167915 sc-eQTL 1.02e-02 0.35 0.135 0.887 CD8_TCM L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 7.62e-01 -0.0435 0.144 0.887 CD8_TCM L2
ENSG00000162517 PEF1 -746820 sc-eQTL 7.39e-01 0.049 0.147 0.887 CD8_TCM L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 9.34e-01 -0.011 0.133 0.887 CD8_TCM L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 5.87e-01 0.073 0.134 0.887 CD8_TCM L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 8.05e-01 -0.0383 0.155 0.89 CD8_TEM L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 3.57e-02 -0.311 0.147 0.89 CD8_TEM L2
ENSG00000134644 PUM1 -167915 sc-eQTL 4.70e-01 0.11 0.152 0.89 CD8_TEM L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 5.57e-01 -0.0841 0.143 0.89 CD8_TEM L2
ENSG00000162517 PEF1 -746820 sc-eQTL 1.52e-01 -0.193 0.134 0.89 CD8_TEM L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 7.46e-01 0.0482 0.148 0.89 CD8_TEM L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 4.70e-01 -0.0971 0.134 0.89 CD8_TEM L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 2.60e-01 -0.173 0.153 0.892 MAIT L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 5.01e-01 0.0918 0.136 0.892 MAIT L2
ENSG00000134644 PUM1 -167915 sc-eQTL 3.52e-01 0.122 0.13 0.892 MAIT L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 3.93e-01 -0.105 0.123 0.892 MAIT L2
ENSG00000162517 PEF1 -746820 sc-eQTL 8.00e-01 -0.0344 0.135 0.892 MAIT L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 4.98e-01 -0.093 0.137 0.892 MAIT L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 6.69e-01 0.0604 0.141 0.892 MAIT L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 8.07e-01 0.0385 0.157 0.891 NK_CD56bright L2
ENSG00000121753 ADGRB2 -866817 sc-eQTL 7.86e-01 -0.0334 0.123 0.891 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 5.00e-01 0.0894 0.132 0.891 NK_CD56bright L2
ENSG00000134644 PUM1 -167915 sc-eQTL 2.22e-01 -0.17 0.139 0.891 NK_CD56bright L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 8.47e-01 -0.0265 0.137 0.891 NK_CD56bright L2
ENSG00000162517 PEF1 -746820 sc-eQTL 1.89e-01 0.175 0.133 0.891 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 3.76e-01 0.122 0.138 0.891 NK_CD56bright L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 5.87e-01 -0.0738 0.136 0.891 NK_CD56bright L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 3.59e-01 0.133 0.144 0.89 NK_CD56dim L2
ENSG00000121753 ADGRB2 -866817 sc-eQTL 1.14e-01 0.201 0.126 0.89 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 2.80e-01 0.115 0.107 0.89 NK_CD56dim L2
ENSG00000134644 PUM1 -167915 sc-eQTL 5.83e-03 0.3 0.108 0.89 NK_CD56dim L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 7.43e-01 0.0383 0.117 0.89 NK_CD56dim L2
ENSG00000162517 PEF1 -746820 sc-eQTL 8.00e-01 -0.0265 0.104 0.89 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 8.61e-01 -0.0256 0.147 0.89 NK_CD56dim L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 1.02e-02 -0.309 0.119 0.89 NK_CD56dim L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 9.42e-01 0.0117 0.161 0.893 NK_HLA L2
ENSG00000121753 ADGRB2 -866817 sc-eQTL 3.67e-01 0.116 0.128 0.893 NK_HLA L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 1.53e-01 0.205 0.143 0.893 NK_HLA L2
ENSG00000134644 PUM1 -167915 sc-eQTL 8.60e-01 -0.0249 0.14 0.893 NK_HLA L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 4.38e-01 -0.104 0.134 0.893 NK_HLA L2
ENSG00000162517 PEF1 -746820 sc-eQTL 3.69e-01 -0.136 0.151 0.893 NK_HLA L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 8.11e-01 0.0341 0.143 0.893 NK_HLA L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 4.79e-01 -0.0977 0.138 0.893 NK_HLA L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 3.57e-01 -0.131 0.142 0.89 NK_cytokine L2
ENSG00000121753 ADGRB2 -866817 sc-eQTL 9.74e-01 0.00425 0.129 0.89 NK_cytokine L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 7.78e-01 0.0314 0.111 0.89 NK_cytokine L2
ENSG00000134644 PUM1 -167915 sc-eQTL 2.27e-02 0.273 0.119 0.89 NK_cytokine L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 4.49e-01 0.1 0.132 0.89 NK_cytokine L2
ENSG00000162517 PEF1 -746820 sc-eQTL 6.74e-01 -0.0475 0.113 0.89 NK_cytokine L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 9.88e-02 -0.231 0.139 0.89 NK_cytokine L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 7.06e-01 0.0492 0.131 0.89 NK_cytokine L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 9.55e-01 -0.0104 0.182 0.904 PB L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 3.04e-01 -0.217 0.21 0.904 PB L2
ENSG00000134644 PUM1 -167915 sc-eQTL 6.90e-01 -0.0733 0.183 0.904 PB L2
ENSG00000162510 MATN1 174491 sc-eQTL 8.17e-01 0.0397 0.171 0.904 PB L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 5.34e-01 0.076 0.122 0.904 PB L2
ENSG00000162517 PEF1 -746820 sc-eQTL 8.97e-03 -0.485 0.182 0.904 PB L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 5.46e-01 0.101 0.167 0.904 PB L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 3.63e-01 0.162 0.177 0.904 PB L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 2.08e-01 -0.141 0.112 0.889 Pro_T L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 3.40e-01 0.136 0.142 0.889 Pro_T L2
ENSG00000134644 PUM1 -167915 sc-eQTL 8.73e-01 -0.0213 0.133 0.889 Pro_T L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 5.37e-01 -0.0589 0.0951 0.889 Pro_T L2
ENSG00000162517 PEF1 -746820 sc-eQTL 6.12e-01 -0.0709 0.14 0.889 Pro_T L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 9.00e-01 -0.0168 0.133 0.889 Pro_T L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 9.09e-01 0.014 0.122 0.889 Pro_T L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 9.04e-02 -0.252 0.148 0.891 Treg L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 8.92e-01 -0.0197 0.144 0.891 Treg L2
ENSG00000134644 PUM1 -167915 sc-eQTL 1.31e-01 0.174 0.115 0.891 Treg L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 7.40e-01 -0.0439 0.132 0.891 Treg L2
ENSG00000162517 PEF1 -746820 sc-eQTL 5.26e-02 -0.276 0.142 0.891 Treg L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 2.48e-01 0.156 0.134 0.891 Treg L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 7.37e-01 -0.0452 0.135 0.891 Treg L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 8.52e-01 0.0278 0.149 0.89 cDC L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 1.03e-01 -0.263 0.16 0.89 cDC L2
ENSG00000134644 PUM1 -167915 sc-eQTL 4.60e-01 -0.102 0.138 0.89 cDC L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 7.43e-02 -0.173 0.0963 0.89 cDC L2
ENSG00000162517 PEF1 -746820 sc-eQTL 9.76e-01 0.00417 0.141 0.89 cDC L2
ENSG00000168528 SERINC2 -511489 sc-eQTL 4.77e-01 -0.0889 0.125 0.89 cDC L2
ENSG00000284543 LINC01226 -608150 sc-eQTL 2.22e-01 -0.149 0.122 0.89 cDC L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 6.23e-01 0.065 0.132 0.89 cDC L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 2.76e-02 -0.261 0.118 0.891 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 2.84e-01 0.142 0.132 0.891 cMono_IL1B L2
ENSG00000134644 PUM1 -167915 sc-eQTL 7.19e-01 0.0324 0.0898 0.891 cMono_IL1B L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 3.74e-01 -0.07 0.0787 0.891 cMono_IL1B L2
ENSG00000162512 SDC3 -10682 sc-eQTL 4.93e-01 -0.102 0.148 0.891 cMono_IL1B L2
ENSG00000162517 PEF1 -746820 sc-eQTL 1.18e-01 -0.189 0.121 0.891 cMono_IL1B L2
ENSG00000168528 SERINC2 -511489 sc-eQTL 4.63e-01 -0.11 0.15 0.891 cMono_IL1B L2
ENSG00000284543 LINC01226 -608150 sc-eQTL 6.35e-01 -0.0632 0.133 0.891 cMono_IL1B L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 3.60e-01 -0.113 0.124 0.891 cMono_IL1B L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 3.42e-01 0.119 0.125 0.891 cMono_S100A L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 8.75e-01 -0.0234 0.148 0.891 cMono_S100A L2
ENSG00000134644 PUM1 -167915 sc-eQTL 5.09e-01 0.0708 0.107 0.891 cMono_S100A L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 4.70e-01 -0.0595 0.0822 0.891 cMono_S100A L2
ENSG00000162512 SDC3 -10682 sc-eQTL 9.68e-01 -0.00567 0.142 0.891 cMono_S100A L2
ENSG00000162517 PEF1 -746820 sc-eQTL 4.57e-01 -0.0956 0.128 0.891 cMono_S100A L2
ENSG00000168528 SERINC2 -511489 sc-eQTL 5.13e-01 -0.0986 0.15 0.891 cMono_S100A L2
ENSG00000284543 LINC01226 -608150 sc-eQTL 8.84e-01 -0.0179 0.122 0.891 cMono_S100A L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 8.36e-01 -0.0255 0.123 0.891 cMono_S100A L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 2.29e-01 -0.207 0.171 0.873 gdT L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 9.06e-01 0.0175 0.148 0.873 gdT L2
ENSG00000134644 PUM1 -167915 sc-eQTL 8.56e-01 0.0276 0.152 0.873 gdT L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 7.91e-01 -0.044 0.166 0.873 gdT L2
ENSG00000162517 PEF1 -746820 sc-eQTL 4.68e-01 -0.11 0.151 0.873 gdT L2
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 7.10e-01 -0.057 0.153 0.873 gdT L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 3.48e-01 0.139 0.148 0.873 gdT L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 5.26e-02 -0.272 0.139 0.891 intMono L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 4.68e-01 -0.11 0.151 0.891 intMono L2
ENSG00000134644 PUM1 -167915 sc-eQTL 2.01e-02 0.297 0.127 0.891 intMono L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 9.18e-01 0.0103 0.101 0.891 intMono L2
ENSG00000162512 SDC3 -10682 sc-eQTL 2.83e-02 -0.301 0.136 0.891 intMono L2
ENSG00000162517 PEF1 -746820 sc-eQTL 7.31e-01 -0.05 0.145 0.891 intMono L2
ENSG00000168528 SERINC2 -511489 sc-eQTL 3.98e-01 -0.122 0.144 0.891 intMono L2
ENSG00000284543 LINC01226 -608150 sc-eQTL 9.12e-01 -0.0152 0.137 0.891 intMono L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 5.61e-03 -0.376 0.134 0.891 intMono L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 2.73e-01 -0.141 0.128 0.889 ncMono L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 2.74e-02 0.301 0.136 0.889 ncMono L2
ENSG00000134644 PUM1 -167915 sc-eQTL 5.40e-01 -0.0688 0.112 0.889 ncMono L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 5.48e-01 0.0613 0.102 0.889 ncMono L2
ENSG00000162512 SDC3 -10682 sc-eQTL 7.22e-01 -0.0407 0.114 0.889 ncMono L2
ENSG00000162517 PEF1 -746820 sc-eQTL 5.27e-01 0.083 0.131 0.889 ncMono L2
ENSG00000168528 SERINC2 -511489 sc-eQTL 8.24e-01 -0.0278 0.125 0.889 ncMono L2
ENSG00000284543 LINC01226 -608150 sc-eQTL 1.30e-02 -0.307 0.123 0.889 ncMono L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 3.18e-01 -0.129 0.129 0.889 ncMono L2
ENSG00000060688 SNRNP40 -398712 sc-eQTL 8.05e-01 -0.0369 0.149 0.876 pDC L2
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 7.71e-01 0.0476 0.163 0.876 pDC L2
ENSG00000134644 PUM1 -167915 sc-eQTL 4.61e-01 0.0999 0.135 0.876 pDC L2
ENSG00000162511 LAPTM5 140302 sc-eQTL 3.72e-01 -0.112 0.125 0.876 pDC L2
ENSG00000162517 PEF1 -746820 sc-eQTL 3.64e-01 -0.148 0.163 0.876 pDC L2
ENSG00000168528 SERINC2 -511489 sc-eQTL 8.05e-01 0.0378 0.153 0.876 pDC L2
ENSG00000284543 LINC01226 -608150 sc-eQTL 7.15e-01 0.0434 0.118 0.876 pDC L2
ENSG00000287510 AL137857.1 166383 sc-eQTL 2.09e-01 -0.175 0.139 0.876 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -398712 sc-eQTL 4.60e-01 0.11 0.149 0.891 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 1.72e-01 -0.17 0.124 0.891 B_Memory LOneK1K
ENSG00000134644 PUM1 -167915 sc-eQTL 6.25e-01 -0.054 0.11 0.891 B_Memory LOneK1K
ENSG00000162510 MATN1 174491 sc-eQTL 3.77e-01 0.111 0.125 0.891 B_Memory LOneK1K
ENSG00000162511 LAPTM5 140302 sc-eQTL 6.21e-01 -0.0391 0.0789 0.891 B_Memory LOneK1K
ENSG00000162517 PEF1 -746820 sc-eQTL 5.73e-01 -0.0738 0.131 0.891 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 7.78e-02 -0.184 0.104 0.891 B_Memory LOneK1K
ENSG00000287510 AL137857.1 166383 sc-eQTL 2.29e-01 -0.137 0.113 0.891 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -398712 sc-eQTL 2.01e-01 -0.172 0.134 0.891 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 7.09e-01 -0.0398 0.107 0.891 B_Naive LOneK1K
ENSG00000134644 PUM1 -167915 sc-eQTL 2.49e-02 0.225 0.0997 0.891 B_Naive LOneK1K
ENSG00000162510 MATN1 174491 sc-eQTL 2.42e-02 0.218 0.096 0.891 B_Naive LOneK1K
ENSG00000162511 LAPTM5 140302 sc-eQTL 3.36e-01 -0.0658 0.0682 0.891 B_Naive LOneK1K
ENSG00000162517 PEF1 -746820 sc-eQTL 2.74e-01 0.137 0.125 0.891 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 1.18e-01 0.138 0.0878 0.891 B_Naive LOneK1K
ENSG00000287510 AL137857.1 166383 sc-eQTL 9.57e-01 -0.00573 0.105 0.891 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -398712 sc-eQTL 3.18e-01 -0.113 0.113 0.891 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 3.55e-01 0.119 0.128 0.891 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -167915 sc-eQTL 5.83e-01 0.045 0.0817 0.891 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 140302 sc-eQTL 2.60e-01 -0.081 0.0717 0.891 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -10682 sc-eQTL 5.90e-01 -0.0791 0.147 0.891 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -746820 sc-eQTL 1.21e-01 -0.16 0.103 0.891 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -511489 sc-eQTL 5.52e-01 -0.0899 0.151 0.891 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -608150 sc-eQTL 6.13e-01 -0.0627 0.124 0.891 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 166383 sc-eQTL 5.37e-01 -0.0716 0.116 0.891 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -398712 sc-eQTL 1.87e-01 -0.163 0.123 0.89 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 2.80e-01 0.146 0.135 0.89 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -167915 sc-eQTL 2.40e-01 0.13 0.111 0.89 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 140302 sc-eQTL 7.23e-01 0.0315 0.0887 0.89 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -10682 sc-eQTL 9.16e-02 -0.218 0.129 0.89 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -746820 sc-eQTL 8.02e-01 0.0295 0.118 0.89 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -511489 sc-eQTL 6.15e-01 -0.0677 0.134 0.89 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -608150 sc-eQTL 1.24e-01 -0.196 0.127 0.89 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 166383 sc-eQTL 8.45e-02 -0.22 0.127 0.89 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -398712 sc-eQTL 8.09e-01 0.0335 0.138 0.89 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -866817 sc-eQTL 9.95e-02 0.194 0.117 0.89 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -398906 sc-eQTL 5.50e-01 0.0565 0.0944 0.89 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -167915 sc-eQTL 1.58e-03 0.324 0.101 0.89 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 140302 sc-eQTL 5.76e-01 0.0648 0.116 0.89 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -746820 sc-eQTL 4.41e-01 -0.0677 0.0877 0.89 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 179572 sc-eQTL 1.51e-01 -0.191 0.133 0.89 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 166383 sc-eQTL 2.15e-02 -0.263 0.114 0.89 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000168528 SERINC2 -511489 eQTL 0.0174 -0.168 0.0706 0.0 0.0 0.0868

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000237329 \N -138658 4e-06 3.66e-06 7.57e-07 1.86e-06 9.11e-07 8.1e-07 2.38e-06 9.07e-07 3.05e-06 1.61e-06 3.52e-06 2.56e-06 5.54e-06 1.19e-06 9.89e-07 2.38e-06 1.61e-06 2.34e-06 1.42e-06 8.79e-07 2.02e-06 3.74e-06 3.37e-06 1.85e-06 4.62e-06 1.32e-06 1.92e-06 1.46e-06 3.85e-06 3.06e-06 2.03e-06 5.43e-07 7.75e-07 1.8e-06 1.91e-06 9.08e-07 9.86e-07 5.04e-07 1.32e-06 3.81e-07 4.41e-07 4.15e-06 4.8e-07 1.62e-07 4.54e-07 3.38e-07 7.12e-07 2.26e-07 3.41e-07