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Genes within 1Mb (chr1:30893924:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -402864 sc-eQTL 3.16e-01 -0.0829 0.0826 0.701 B L1
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 4.45e-01 -0.0506 0.0662 0.701 B L1
ENSG00000134644 PUM1 -172067 sc-eQTL 8.74e-02 0.0948 0.0552 0.701 B L1
ENSG00000162510 MATN1 170339 sc-eQTL 1.04e-01 0.0949 0.0581 0.701 B L1
ENSG00000162511 LAPTM5 136150 sc-eQTL 7.01e-01 0.0176 0.0458 0.701 B L1
ENSG00000162517 PEF1 -750972 sc-eQTL 9.71e-01 -0.00248 0.0691 0.701 B L1
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 8.39e-01 0.0109 0.0536 0.701 B L1
ENSG00000287510 AL137857.1 162231 sc-eQTL 8.96e-01 0.00831 0.0635 0.701 B L1
ENSG00000060688 SNRNP40 -402864 sc-eQTL 9.88e-01 -0.00106 0.0715 0.701 CD4T L1
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 2.29e-01 -0.0671 0.0556 0.701 CD4T L1
ENSG00000134644 PUM1 -172067 sc-eQTL 2.55e-01 0.0565 0.0495 0.701 CD4T L1
ENSG00000162511 LAPTM5 136150 sc-eQTL 3.68e-02 -0.115 0.0545 0.701 CD4T L1
ENSG00000162517 PEF1 -750972 sc-eQTL 6.91e-01 0.0229 0.0576 0.701 CD4T L1
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 2.08e-01 -0.062 0.0491 0.701 CD4T L1
ENSG00000287510 AL137857.1 162231 sc-eQTL 2.03e-01 0.0751 0.0588 0.701 CD4T L1
ENSG00000060688 SNRNP40 -402864 sc-eQTL 6.09e-01 -0.0485 0.0946 0.701 CD8T L1
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 7.47e-01 0.0203 0.063 0.701 CD8T L1
ENSG00000134644 PUM1 -172067 sc-eQTL 1.33e-01 0.0833 0.0552 0.701 CD8T L1
ENSG00000162511 LAPTM5 136150 sc-eQTL 1.57e-01 -0.0762 0.0536 0.701 CD8T L1
ENSG00000162517 PEF1 -750972 sc-eQTL 9.66e-01 0.0028 0.0664 0.701 CD8T L1
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 2.16e-01 -0.0782 0.0629 0.701 CD8T L1
ENSG00000287510 AL137857.1 162231 sc-eQTL 3.25e-01 0.0781 0.0792 0.701 CD8T L1
ENSG00000060688 SNRNP40 -402864 sc-eQTL 3.61e-01 0.0778 0.0851 0.705 DC L1
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 1.74e-01 -0.137 0.1 0.705 DC L1
ENSG00000134644 PUM1 -172067 sc-eQTL 9.90e-01 0.000949 0.0791 0.705 DC L1
ENSG00000162511 LAPTM5 136150 sc-eQTL 5.47e-02 -0.108 0.0559 0.705 DC L1
ENSG00000162517 PEF1 -750972 sc-eQTL 9.52e-01 0.00548 0.0916 0.705 DC L1
ENSG00000168528 SERINC2 -515641 sc-eQTL 6.88e-02 0.169 0.0923 0.705 DC L1
ENSG00000284543 LINC01226 -612302 sc-eQTL 8.58e-01 0.011 0.0617 0.705 DC L1
ENSG00000287510 AL137857.1 162231 sc-eQTL 6.36e-01 0.0423 0.0893 0.705 DC L1
ENSG00000060688 SNRNP40 -402864 sc-eQTL 3.46e-01 0.0614 0.0651 0.701 Mono L1
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 1.66e-01 0.112 0.0804 0.701 Mono L1
ENSG00000134644 PUM1 -172067 sc-eQTL 3.95e-01 0.0441 0.0517 0.701 Mono L1
ENSG00000162511 LAPTM5 136150 sc-eQTL 1.13e-01 -0.0754 0.0474 0.701 Mono L1
ENSG00000162512 SDC3 -14834 sc-eQTL 4.28e-02 -0.185 0.0907 0.701 Mono L1
ENSG00000162517 PEF1 -750972 sc-eQTL 9.56e-01 0.00354 0.0643 0.701 Mono L1
ENSG00000168528 SERINC2 -515641 sc-eQTL 7.85e-02 0.172 0.0976 0.701 Mono L1
ENSG00000284543 LINC01226 -612302 sc-eQTL 2.83e-01 0.0929 0.0863 0.701 Mono L1
ENSG00000287510 AL137857.1 162231 sc-eQTL 3.11e-01 -0.0767 0.0755 0.701 Mono L1
ENSG00000060688 SNRNP40 -402864 sc-eQTL 7.74e-02 0.16 0.0902 0.7 NK L1
ENSG00000121753 ADGRB2 -870969 sc-eQTL 3.47e-01 0.0735 0.078 0.7 NK L1
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 4.09e-01 0.0514 0.0621 0.7 NK L1
ENSG00000134644 PUM1 -172067 sc-eQTL 9.11e-03 0.169 0.0642 0.7 NK L1
ENSG00000162511 LAPTM5 136150 sc-eQTL 6.31e-01 -0.0361 0.075 0.7 NK L1
ENSG00000162517 PEF1 -750972 sc-eQTL 6.59e-01 -0.0242 0.0548 0.7 NK L1
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 4.42e-01 -0.0649 0.0842 0.7 NK L1
ENSG00000287510 AL137857.1 162231 sc-eQTL 3.27e-01 -0.0764 0.0777 0.7 NK L1
ENSG00000060688 SNRNP40 -402864 sc-eQTL 2.88e-01 -0.0726 0.0681 0.701 Other_T L1
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 9.59e-01 0.00372 0.073 0.701 Other_T L1
ENSG00000134644 PUM1 -172067 sc-eQTL 4.56e-01 0.0489 0.0655 0.701 Other_T L1
ENSG00000162511 LAPTM5 136150 sc-eQTL 4.72e-01 -0.0387 0.0537 0.701 Other_T L1
ENSG00000162517 PEF1 -750972 sc-eQTL 7.31e-01 0.0247 0.0718 0.701 Other_T L1
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 3.28e-01 -0.0861 0.0879 0.701 Other_T L1
ENSG00000287510 AL137857.1 162231 sc-eQTL 5.77e-01 -0.0512 0.0917 0.701 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -402864 sc-eQTL 9.27e-01 0.00973 0.106 0.696 B_Activated L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 3.24e-01 -0.105 0.106 0.696 B_Activated L2
ENSG00000134644 PUM1 -172067 sc-eQTL 8.53e-01 0.0184 0.0991 0.696 B_Activated L2
ENSG00000162510 MATN1 170339 sc-eQTL 3.94e-01 0.0738 0.0864 0.696 B_Activated L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 1.41e-01 0.0888 0.06 0.696 B_Activated L2
ENSG00000162517 PEF1 -750972 sc-eQTL 6.83e-01 0.042 0.103 0.696 B_Activated L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 5.35e-02 -0.188 0.0964 0.696 B_Activated L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 4.25e-01 0.0689 0.0861 0.696 B_Activated L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 7.41e-01 -0.0342 0.103 0.702 B_Intermediate L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 2.65e-01 0.0959 0.0858 0.702 B_Intermediate L2
ENSG00000134644 PUM1 -172067 sc-eQTL 8.13e-01 0.0192 0.0812 0.702 B_Intermediate L2
ENSG00000162510 MATN1 170339 sc-eQTL 4.23e-01 -0.0677 0.0844 0.702 B_Intermediate L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 9.25e-01 0.00488 0.0519 0.702 B_Intermediate L2
ENSG00000162517 PEF1 -750972 sc-eQTL 5.44e-01 0.0585 0.0962 0.702 B_Intermediate L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 4.82e-01 -0.0512 0.0727 0.702 B_Intermediate L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 5.40e-01 -0.0499 0.0814 0.702 B_Intermediate L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 9.62e-01 0.00471 0.0991 0.703 B_Memory L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 9.04e-01 0.011 0.0913 0.703 B_Memory L2
ENSG00000134644 PUM1 -172067 sc-eQTL 8.13e-01 -0.0189 0.0795 0.703 B_Memory L2
ENSG00000162510 MATN1 170339 sc-eQTL 1.20e-01 0.118 0.0756 0.703 B_Memory L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 6.77e-01 0.0281 0.0674 0.703 B_Memory L2
ENSG00000162517 PEF1 -750972 sc-eQTL 1.72e-01 -0.123 0.0896 0.703 B_Memory L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 7.54e-01 0.0241 0.0771 0.703 B_Memory L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 9.87e-01 -0.00147 0.0903 0.703 B_Memory L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 5.67e-01 -0.0519 0.0904 0.701 B_Naive1 L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 3.52e-01 0.0727 0.0779 0.701 B_Naive1 L2
ENSG00000134644 PUM1 -172067 sc-eQTL 5.95e-02 0.129 0.0683 0.701 B_Naive1 L2
ENSG00000162510 MATN1 170339 sc-eQTL 1.29e-01 0.106 0.0695 0.701 B_Naive1 L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 9.21e-01 -0.00466 0.0467 0.701 B_Naive1 L2
ENSG00000162517 PEF1 -750972 sc-eQTL 8.68e-01 -0.0137 0.0823 0.701 B_Naive1 L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 7.47e-01 0.0198 0.0613 0.701 B_Naive1 L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 9.88e-01 -0.00112 0.0757 0.701 B_Naive1 L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 2.20e-01 -0.119 0.0965 0.702 B_Naive2 L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 2.04e-02 -0.184 0.0789 0.702 B_Naive2 L2
ENSG00000134644 PUM1 -172067 sc-eQTL 1.63e-01 0.109 0.0779 0.702 B_Naive2 L2
ENSG00000162510 MATN1 170339 sc-eQTL 9.79e-01 -0.00198 0.0751 0.702 B_Naive2 L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 8.65e-01 -0.00868 0.051 0.702 B_Naive2 L2
ENSG00000162517 PEF1 -750972 sc-eQTL 6.45e-01 0.0427 0.0927 0.702 B_Naive2 L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 4.83e-01 0.0522 0.0742 0.702 B_Naive2 L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 1.71e-01 0.11 0.0798 0.702 B_Naive2 L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 9.15e-01 0.0108 0.101 0.702 CD4_CTL L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 6.95e-01 0.039 0.0993 0.702 CD4_CTL L2
ENSG00000134644 PUM1 -172067 sc-eQTL 9.87e-01 -0.00162 0.0974 0.702 CD4_CTL L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 1.76e-02 -0.205 0.0856 0.702 CD4_CTL L2
ENSG00000162517 PEF1 -750972 sc-eQTL 2.85e-01 -0.0952 0.0888 0.702 CD4_CTL L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 7.92e-01 0.0251 0.095 0.702 CD4_CTL L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 9.26e-01 -0.00782 0.0838 0.702 CD4_CTL L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 4.00e-01 -0.0627 0.0744 0.701 CD4_Naive L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 3.31e-01 -0.0642 0.0659 0.701 CD4_Naive L2
ENSG00000134644 PUM1 -172067 sc-eQTL 6.02e-01 0.0276 0.0527 0.701 CD4_Naive L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 2.02e-02 -0.13 0.0558 0.701 CD4_Naive L2
ENSG00000162517 PEF1 -750972 sc-eQTL 6.82e-01 -0.0254 0.0619 0.701 CD4_Naive L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 3.79e-01 -0.0505 0.0572 0.701 CD4_Naive L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 8.92e-02 0.112 0.0654 0.701 CD4_Naive L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 8.82e-01 0.0139 0.0938 0.701 CD4_TCM L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 1.81e-01 -0.101 0.0753 0.701 CD4_TCM L2
ENSG00000134644 PUM1 -172067 sc-eQTL 9.46e-01 -0.00452 0.0669 0.701 CD4_TCM L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 1.25e-01 -0.085 0.0552 0.701 CD4_TCM L2
ENSG00000162517 PEF1 -750972 sc-eQTL 5.36e-01 0.0461 0.0743 0.701 CD4_TCM L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 9.80e-01 -0.00176 0.0704 0.701 CD4_TCM L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 3.29e-01 0.0766 0.0783 0.701 CD4_TCM L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 9.75e-02 0.157 0.0945 0.701 CD4_TEM L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 1.48e-01 -0.131 0.0902 0.701 CD4_TEM L2
ENSG00000134644 PUM1 -172067 sc-eQTL 5.92e-01 0.0404 0.0754 0.701 CD4_TEM L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 1.25e-01 -0.117 0.0759 0.701 CD4_TEM L2
ENSG00000162517 PEF1 -750972 sc-eQTL 6.69e-01 0.0367 0.0855 0.701 CD4_TEM L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 8.41e-01 -0.018 0.0893 0.701 CD4_TEM L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 1.89e-01 -0.116 0.0876 0.701 CD4_TEM L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 9.25e-01 0.00954 0.102 0.701 CD8_CTL L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 7.34e-01 0.0265 0.078 0.701 CD8_CTL L2
ENSG00000134644 PUM1 -172067 sc-eQTL 2.82e-01 0.0815 0.0756 0.701 CD8_CTL L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 8.20e-02 -0.146 0.0833 0.701 CD8_CTL L2
ENSG00000162517 PEF1 -750972 sc-eQTL 8.99e-01 -0.0093 0.0731 0.701 CD8_CTL L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 4.98e-01 -0.0598 0.0881 0.701 CD8_CTL L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 9.59e-01 -0.0043 0.083 0.701 CD8_CTL L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 7.72e-01 -0.0275 0.0948 0.701 CD8_Naive L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 4.81e-01 0.0577 0.0817 0.701 CD8_Naive L2
ENSG00000134644 PUM1 -172067 sc-eQTL 5.20e-01 -0.0424 0.0657 0.701 CD8_Naive L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 8.74e-01 -0.01 0.063 0.701 CD8_Naive L2
ENSG00000162517 PEF1 -750972 sc-eQTL 3.33e-01 -0.0849 0.0875 0.701 CD8_Naive L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 8.95e-01 -0.0104 0.0787 0.701 CD8_Naive L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 1.87e-01 0.113 0.0853 0.701 CD8_Naive L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 9.80e-01 0.00271 0.107 0.704 CD8_TCM L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 8.40e-01 -0.0199 0.0984 0.704 CD8_TCM L2
ENSG00000134644 PUM1 -172067 sc-eQTL 2.17e-01 0.114 0.0922 0.704 CD8_TCM L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 1.89e-01 -0.127 0.0964 0.704 CD8_TCM L2
ENSG00000162517 PEF1 -750972 sc-eQTL 7.68e-01 -0.0293 0.099 0.704 CD8_TCM L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 6.60e-01 0.0394 0.0896 0.704 CD8_TCM L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 2.83e-01 0.0973 0.0904 0.704 CD8_TCM L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 8.24e-01 0.0227 0.102 0.708 CD8_TEM L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 8.55e-01 -0.0178 0.0976 0.708 CD8_TEM L2
ENSG00000134644 PUM1 -172067 sc-eQTL 1.19e-01 0.155 0.0992 0.708 CD8_TEM L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 8.82e-01 -0.0139 0.0938 0.708 CD8_TEM L2
ENSG00000162517 PEF1 -750972 sc-eQTL 8.08e-01 0.0215 0.0883 0.708 CD8_TEM L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 9.78e-01 0.0027 0.0974 0.708 CD8_TEM L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 9.46e-02 0.147 0.0875 0.708 CD8_TEM L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 5.33e-01 -0.0651 0.104 0.703 MAIT L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 9.28e-01 -0.00837 0.0926 0.703 MAIT L2
ENSG00000134644 PUM1 -172067 sc-eQTL 6.50e-01 -0.0403 0.0887 0.703 MAIT L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 7.88e-01 -0.0226 0.0837 0.703 MAIT L2
ENSG00000162517 PEF1 -750972 sc-eQTL 4.38e-01 0.0714 0.0918 0.703 MAIT L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 1.21e-01 -0.144 0.0927 0.703 MAIT L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 5.55e-01 0.0568 0.096 0.703 MAIT L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 2.40e-02 0.233 0.102 0.7 NK_CD56bright L2
ENSG00000121753 ADGRB2 -870969 sc-eQTL 3.15e-01 -0.0816 0.081 0.7 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 6.23e-01 -0.0431 0.0876 0.7 NK_CD56bright L2
ENSG00000134644 PUM1 -172067 sc-eQTL 5.72e-01 0.0521 0.092 0.7 NK_CD56bright L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 2.48e-01 -0.105 0.0905 0.7 NK_CD56bright L2
ENSG00000162517 PEF1 -750972 sc-eQTL 6.36e-01 0.0417 0.0881 0.7 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 1.28e-01 0.139 0.0907 0.7 NK_CD56bright L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 5.21e-01 0.0577 0.0898 0.7 NK_CD56bright L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 1.63e-01 0.134 0.0953 0.698 NK_CD56dim L2
ENSG00000121753 ADGRB2 -870969 sc-eQTL 1.77e-01 0.114 0.0839 0.698 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 2.71e-01 0.0779 0.0706 0.698 NK_CD56dim L2
ENSG00000134644 PUM1 -172067 sc-eQTL 1.58e-01 0.103 0.0723 0.698 NK_CD56dim L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 8.80e-01 -0.0117 0.0775 0.698 NK_CD56dim L2
ENSG00000162517 PEF1 -750972 sc-eQTL 9.32e-01 -0.00588 0.0689 0.698 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 5.81e-01 -0.0536 0.097 0.698 NK_CD56dim L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 1.86e-01 -0.106 0.0797 0.698 NK_CD56dim L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 6.30e-01 0.0488 0.101 0.696 NK_HLA L2
ENSG00000121753 ADGRB2 -870969 sc-eQTL 5.17e-01 0.0521 0.0803 0.696 NK_HLA L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 4.24e-01 0.0723 0.0902 0.696 NK_HLA L2
ENSG00000134644 PUM1 -172067 sc-eQTL 2.40e-01 0.103 0.0878 0.696 NK_HLA L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 5.78e-01 -0.0468 0.084 0.696 NK_HLA L2
ENSG00000162517 PEF1 -750972 sc-eQTL 7.03e-01 -0.0362 0.0947 0.696 NK_HLA L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 3.98e-01 0.0756 0.0893 0.696 NK_HLA L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 5.38e-01 -0.0533 0.0864 0.696 NK_HLA L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 3.56e-01 0.0854 0.0924 0.698 NK_cytokine L2
ENSG00000121753 ADGRB2 -870969 sc-eQTL 9.27e-01 0.00769 0.0836 0.698 NK_cytokine L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 9.24e-01 -0.00694 0.0722 0.698 NK_cytokine L2
ENSG00000134644 PUM1 -172067 sc-eQTL 8.29e-02 0.135 0.0776 0.698 NK_cytokine L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 4.06e-01 -0.0715 0.0859 0.698 NK_cytokine L2
ENSG00000162517 PEF1 -750972 sc-eQTL 5.52e-01 0.0436 0.0732 0.698 NK_cytokine L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 2.42e-01 -0.107 0.0909 0.698 NK_cytokine L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 1.28e-01 0.129 0.0843 0.698 NK_cytokine L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 2.62e-01 0.121 0.108 0.707 PB L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 9.97e-01 0.000537 0.126 0.707 PB L2
ENSG00000134644 PUM1 -172067 sc-eQTL 5.79e-01 -0.0606 0.109 0.707 PB L2
ENSG00000162510 MATN1 170339 sc-eQTL 7.83e-01 -0.028 0.102 0.707 PB L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 7.18e-01 -0.0263 0.0726 0.707 PB L2
ENSG00000162517 PEF1 -750972 sc-eQTL 3.87e-02 -0.23 0.11 0.707 PB L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 8.31e-01 -0.0213 0.0994 0.707 PB L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 7.04e-01 0.0403 0.106 0.707 PB L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 1.29e-01 -0.11 0.0724 0.698 Pro_T L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 9.64e-01 -0.00419 0.0925 0.698 Pro_T L2
ENSG00000134644 PUM1 -172067 sc-eQTL 1.08e-01 0.138 0.0857 0.698 Pro_T L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 5.25e-01 -0.0393 0.0618 0.698 Pro_T L2
ENSG00000162517 PEF1 -750972 sc-eQTL 5.67e-01 -0.052 0.0907 0.698 Pro_T L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 3.68e-01 0.0779 0.0863 0.698 Pro_T L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 7.74e-01 0.0229 0.0795 0.698 Pro_T L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 4.28e-01 -0.0783 0.0985 0.701 Treg L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 8.84e-02 0.162 0.0948 0.701 Treg L2
ENSG00000134644 PUM1 -172067 sc-eQTL 1.61e-04 0.284 0.0739 0.701 Treg L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 4.80e-01 0.0618 0.0874 0.701 Treg L2
ENSG00000162517 PEF1 -750972 sc-eQTL 8.67e-01 -0.0159 0.0945 0.701 Treg L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 1.39e-01 -0.132 0.0887 0.701 Treg L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 5.48e-01 0.0535 0.089 0.701 Treg L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 1.88e-01 0.128 0.0973 0.712 cDC L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 3.58e-01 -0.0972 0.106 0.712 cDC L2
ENSG00000134644 PUM1 -172067 sc-eQTL 1.13e-01 0.144 0.0903 0.712 cDC L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 2.31e-01 -0.0762 0.0635 0.712 cDC L2
ENSG00000162517 PEF1 -750972 sc-eQTL 8.54e-02 0.158 0.0915 0.712 cDC L2
ENSG00000168528 SERINC2 -515641 sc-eQTL 6.48e-01 -0.0374 0.0817 0.712 cDC L2
ENSG00000284543 LINC01226 -612302 sc-eQTL 5.25e-02 -0.155 0.0795 0.712 cDC L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 6.82e-01 -0.0355 0.0865 0.712 cDC L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 3.91e-01 0.0677 0.0787 0.701 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 3.37e-01 0.0844 0.0878 0.701 cMono_IL1B L2
ENSG00000134644 PUM1 -172067 sc-eQTL 4.35e-01 0.0465 0.0595 0.701 cMono_IL1B L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 2.76e-01 -0.0569 0.0521 0.701 cMono_IL1B L2
ENSG00000162512 SDC3 -14834 sc-eQTL 4.01e-01 -0.0827 0.0983 0.701 cMono_IL1B L2
ENSG00000162517 PEF1 -750972 sc-eQTL 3.70e-01 0.0721 0.0803 0.701 cMono_IL1B L2
ENSG00000168528 SERINC2 -515641 sc-eQTL 4.90e-02 0.195 0.0987 0.701 cMono_IL1B L2
ENSG00000284543 LINC01226 -612302 sc-eQTL 2.70e-01 0.0971 0.0878 0.701 cMono_IL1B L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 2.73e-01 -0.0901 0.0819 0.701 cMono_IL1B L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 5.59e-01 0.048 0.0819 0.701 cMono_S100A L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 9.83e-01 0.0021 0.0969 0.701 cMono_S100A L2
ENSG00000134644 PUM1 -172067 sc-eQTL 5.18e-01 0.0453 0.07 0.701 cMono_S100A L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 4.90e-01 -0.0372 0.0538 0.701 cMono_S100A L2
ENSG00000162512 SDC3 -14834 sc-eQTL 8.97e-01 -0.012 0.093 0.701 cMono_S100A L2
ENSG00000162517 PEF1 -750972 sc-eQTL 7.47e-01 -0.0272 0.0839 0.701 cMono_S100A L2
ENSG00000168528 SERINC2 -515641 sc-eQTL 5.48e-02 0.188 0.0976 0.701 cMono_S100A L2
ENSG00000284543 LINC01226 -612302 sc-eQTL 1.31e-01 0.121 0.0795 0.701 cMono_S100A L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 8.23e-01 0.018 0.0803 0.701 cMono_S100A L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 4.44e-01 -0.0981 0.128 0.7 gdT L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 8.93e-01 -0.0148 0.11 0.7 gdT L2
ENSG00000134644 PUM1 -172067 sc-eQTL 3.63e-01 0.103 0.113 0.7 gdT L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 7.31e-01 -0.0424 0.123 0.7 gdT L2
ENSG00000162517 PEF1 -750972 sc-eQTL 8.69e-01 0.0186 0.113 0.7 gdT L2
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 5.20e-01 -0.0733 0.113 0.7 gdT L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 7.45e-01 -0.0359 0.11 0.7 gdT L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 9.38e-01 0.00729 0.0934 0.702 intMono L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 3.20e-01 0.0998 0.1 0.702 intMono L2
ENSG00000134644 PUM1 -172067 sc-eQTL 1.58e-02 0.204 0.084 0.702 intMono L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 3.76e-01 -0.0592 0.0667 0.702 intMono L2
ENSG00000162512 SDC3 -14834 sc-eQTL 9.45e-03 -0.236 0.09 0.702 intMono L2
ENSG00000162517 PEF1 -750972 sc-eQTL 9.42e-01 0.007 0.0962 0.702 intMono L2
ENSG00000168528 SERINC2 -515641 sc-eQTL 8.46e-01 -0.0187 0.0958 0.702 intMono L2
ENSG00000284543 LINC01226 -612302 sc-eQTL 4.22e-01 0.073 0.0907 0.702 intMono L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 6.72e-02 -0.166 0.0901 0.702 intMono L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 8.59e-01 -0.0153 0.0859 0.704 ncMono L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 5.85e-02 0.173 0.0908 0.704 ncMono L2
ENSG00000134644 PUM1 -172067 sc-eQTL 1.97e-01 0.0965 0.0746 0.704 ncMono L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 3.23e-01 -0.0672 0.0678 0.704 ncMono L2
ENSG00000162512 SDC3 -14834 sc-eQTL 2.63e-01 -0.0854 0.076 0.704 ncMono L2
ENSG00000162517 PEF1 -750972 sc-eQTL 2.52e-01 0.1 0.0871 0.704 ncMono L2
ENSG00000168528 SERINC2 -515641 sc-eQTL 2.97e-01 0.0868 0.083 0.704 ncMono L2
ENSG00000284543 LINC01226 -612302 sc-eQTL 3.65e-01 -0.0753 0.083 0.704 ncMono L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 6.52e-01 -0.0389 0.0862 0.704 ncMono L2
ENSG00000060688 SNRNP40 -402864 sc-eQTL 5.92e-01 -0.0535 0.0997 0.709 pDC L2
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 3.80e-01 -0.0961 0.109 0.709 pDC L2
ENSG00000134644 PUM1 -172067 sc-eQTL 9.46e-01 -0.00618 0.0908 0.709 pDC L2
ENSG00000162511 LAPTM5 136150 sc-eQTL 2.12e-01 -0.105 0.084 0.709 pDC L2
ENSG00000162517 PEF1 -750972 sc-eQTL 1.43e-01 -0.16 0.109 0.709 pDC L2
ENSG00000168528 SERINC2 -515641 sc-eQTL 7.25e-02 0.183 0.101 0.709 pDC L2
ENSG00000284543 LINC01226 -612302 sc-eQTL 8.32e-01 0.0169 0.0795 0.709 pDC L2
ENSG00000287510 AL137857.1 162231 sc-eQTL 8.96e-01 -0.0123 0.0935 0.709 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -402864 sc-eQTL 7.98e-01 -0.0248 0.0968 0.701 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 9.51e-01 -0.00492 0.0806 0.701 B_Memory LOneK1K
ENSG00000134644 PUM1 -172067 sc-eQTL 7.92e-01 0.0189 0.0714 0.701 B_Memory LOneK1K
ENSG00000162510 MATN1 170339 sc-eQTL 8.88e-01 0.0115 0.0814 0.701 B_Memory LOneK1K
ENSG00000162511 LAPTM5 136150 sc-eQTL 7.29e-01 0.0177 0.0511 0.701 B_Memory LOneK1K
ENSG00000162517 PEF1 -750972 sc-eQTL 8.91e-01 0.0116 0.0847 0.701 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 4.30e-01 -0.0534 0.0675 0.701 B_Memory LOneK1K
ENSG00000287510 AL137857.1 162231 sc-eQTL 3.78e-01 -0.065 0.0736 0.701 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -402864 sc-eQTL 3.05e-01 -0.0902 0.0877 0.701 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 3.75e-01 -0.0616 0.0694 0.701 B_Naive LOneK1K
ENSG00000134644 PUM1 -172067 sc-eQTL 2.53e-02 0.146 0.065 0.701 B_Naive LOneK1K
ENSG00000162510 MATN1 170339 sc-eQTL 8.45e-02 0.109 0.0629 0.701 B_Naive LOneK1K
ENSG00000162511 LAPTM5 136150 sc-eQTL 8.67e-01 0.00745 0.0446 0.701 B_Naive LOneK1K
ENSG00000162517 PEF1 -750972 sc-eQTL 9.25e-01 0.00768 0.0814 0.701 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 4.18e-01 0.0467 0.0575 0.701 B_Naive LOneK1K
ENSG00000287510 AL137857.1 162231 sc-eQTL 9.74e-01 0.0022 0.0684 0.701 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -402864 sc-eQTL 3.36e-01 0.072 0.0748 0.701 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 2.80e-01 0.0917 0.0846 0.701 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -172067 sc-eQTL 4.82e-01 0.0381 0.0541 0.701 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 136150 sc-eQTL 2.28e-01 -0.0574 0.0474 0.701 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -14834 sc-eQTL 5.86e-01 -0.0529 0.097 0.701 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -750972 sc-eQTL 9.00e-01 0.00863 0.0683 0.701 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -515641 sc-eQTL 4.43e-02 0.2 0.0989 0.701 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -612302 sc-eQTL 1.04e-01 0.133 0.0814 0.701 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 162231 sc-eQTL 5.39e-01 -0.0472 0.0766 0.701 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -402864 sc-eQTL 6.78e-01 0.034 0.0819 0.698 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 2.12e-01 0.112 0.0893 0.698 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -172067 sc-eQTL 4.95e-02 0.144 0.0728 0.698 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 136150 sc-eQTL 1.14e-01 -0.0928 0.0584 0.698 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -14834 sc-eQTL 4.43e-03 -0.242 0.0842 0.698 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -750972 sc-eQTL 7.05e-01 0.0295 0.0779 0.698 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -515641 sc-eQTL 6.16e-01 0.0446 0.0889 0.698 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -612302 sc-eQTL 8.81e-01 -0.0127 0.0845 0.698 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 162231 sc-eQTL 2.53e-01 -0.0967 0.0843 0.698 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -402864 sc-eQTL 1.83e-01 0.121 0.0905 0.698 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -870969 sc-eQTL 2.26e-01 0.0936 0.0771 0.698 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -403058 sc-eQTL 3.27e-01 0.0608 0.0619 0.698 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -172067 sc-eQTL 1.96e-02 0.158 0.0671 0.698 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 136150 sc-eQTL 6.96e-01 -0.0297 0.0759 0.698 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -750972 sc-eQTL 5.60e-01 -0.0336 0.0577 0.698 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 175420 sc-eQTL 2.84e-01 -0.0939 0.0874 0.698 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 162231 sc-eQTL 3.11e-01 -0.0767 0.0754 0.698 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000186056 MATN1-AS1 175420 eQTL 5.29e-03 0.0402 0.0144 0.00136 0.0 0.281

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina