logo

Genes within 1Mb (chr1:30888949:C:CT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -407839 sc-eQTL 9.86e-01 -0.00154 0.0864 0.639 B L1
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 5.33e-01 -0.0432 0.0691 0.639 B L1
ENSG00000134644 PUM1 -177042 sc-eQTL 3.58e-01 -0.0534 0.0579 0.639 B L1
ENSG00000162510 MATN1 165364 sc-eQTL 6.68e-01 0.0262 0.061 0.639 B L1
ENSG00000162511 LAPTM5 131175 sc-eQTL 7.01e-01 -0.0184 0.0478 0.639 B L1
ENSG00000162517 PEF1 -755947 sc-eQTL 5.27e-01 -0.0457 0.0721 0.639 B L1
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 8.55e-01 0.0102 0.056 0.639 B L1
ENSG00000287510 AL137857.1 157256 sc-eQTL 9.34e-02 0.111 0.0658 0.639 B L1
ENSG00000060688 SNRNP40 -407839 sc-eQTL 1.88e-01 -0.0991 0.075 0.639 CD4T L1
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 7.02e-01 -0.0225 0.0588 0.639 CD4T L1
ENSG00000134644 PUM1 -177042 sc-eQTL 3.30e-01 -0.051 0.0522 0.639 CD4T L1
ENSG00000162511 LAPTM5 131175 sc-eQTL 4.36e-01 0.0453 0.0579 0.639 CD4T L1
ENSG00000162517 PEF1 -755947 sc-eQTL 4.80e-01 -0.0428 0.0606 0.639 CD4T L1
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 6.53e-01 -0.0233 0.0519 0.639 CD4T L1
ENSG00000287510 AL137857.1 157256 sc-eQTL 4.77e-01 0.0443 0.0621 0.639 CD4T L1
ENSG00000060688 SNRNP40 -407839 sc-eQTL 8.03e-01 0.0249 0.0994 0.639 CD8T L1
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 4.83e-01 0.0465 0.0661 0.639 CD8T L1
ENSG00000134644 PUM1 -177042 sc-eQTL 3.62e-02 -0.122 0.0577 0.639 CD8T L1
ENSG00000162511 LAPTM5 131175 sc-eQTL 1.78e-01 0.0761 0.0563 0.639 CD8T L1
ENSG00000162517 PEF1 -755947 sc-eQTL 5.07e-01 -0.0463 0.0696 0.639 CD8T L1
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 1.52e-01 0.0948 0.066 0.639 CD8T L1
ENSG00000287510 AL137857.1 157256 sc-eQTL 4.49e-01 0.0631 0.0832 0.639 CD8T L1
ENSG00000060688 SNRNP40 -407839 sc-eQTL 2.41e-01 -0.102 0.0864 0.64 DC L1
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 1.13e-01 -0.162 0.102 0.64 DC L1
ENSG00000134644 PUM1 -177042 sc-eQTL 1.24e-01 -0.124 0.08 0.64 DC L1
ENSG00000162511 LAPTM5 131175 sc-eQTL 5.65e-02 0.109 0.0569 0.64 DC L1
ENSG00000162517 PEF1 -755947 sc-eQTL 8.57e-01 0.0168 0.0931 0.64 DC L1
ENSG00000168528 SERINC2 -520616 sc-eQTL 3.07e-01 0.0967 0.0945 0.64 DC L1
ENSG00000284543 LINC01226 -617277 sc-eQTL 6.50e-01 -0.0285 0.0627 0.64 DC L1
ENSG00000287510 AL137857.1 157256 sc-eQTL 1.07e-01 0.146 0.0903 0.64 DC L1
ENSG00000060688 SNRNP40 -407839 sc-eQTL 8.26e-01 -0.0148 0.0672 0.639 Mono L1
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 8.66e-01 0.014 0.0833 0.639 Mono L1
ENSG00000134644 PUM1 -177042 sc-eQTL 3.73e-01 0.0476 0.0533 0.639 Mono L1
ENSG00000162511 LAPTM5 131175 sc-eQTL 7.75e-01 0.0141 0.0491 0.639 Mono L1
ENSG00000162512 SDC3 -19809 sc-eQTL 1.05e-01 -0.153 0.0938 0.639 Mono L1
ENSG00000162517 PEF1 -755947 sc-eQTL 7.38e-01 -0.0222 0.0662 0.639 Mono L1
ENSG00000168528 SERINC2 -520616 sc-eQTL 2.57e-01 0.115 0.101 0.639 Mono L1
ENSG00000284543 LINC01226 -617277 sc-eQTL 5.61e-01 -0.0519 0.0892 0.639 Mono L1
ENSG00000287510 AL137857.1 157256 sc-eQTL 9.10e-01 -0.00879 0.078 0.639 Mono L1
ENSG00000060688 SNRNP40 -407839 sc-eQTL 4.65e-01 0.0689 0.0942 0.639 NK L1
ENSG00000121753 ADGRB2 -875944 sc-eQTL 9.42e-01 -0.00595 0.0812 0.639 NK L1
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 2.45e-02 -0.145 0.0638 0.639 NK L1
ENSG00000134644 PUM1 -177042 sc-eQTL 4.90e-01 -0.0468 0.0677 0.639 NK L1
ENSG00000162511 LAPTM5 131175 sc-eQTL 3.35e-01 0.0752 0.0778 0.639 NK L1
ENSG00000162517 PEF1 -755947 sc-eQTL 1.02e-01 0.0928 0.0566 0.639 NK L1
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 3.10e-01 0.089 0.0874 0.639 NK L1
ENSG00000287510 AL137857.1 157256 sc-eQTL 8.03e-03 0.213 0.0796 0.639 NK L1
ENSG00000060688 SNRNP40 -407839 sc-eQTL 9.57e-01 0.00386 0.0709 0.639 Other_T L1
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 2.40e-01 -0.0891 0.0756 0.639 Other_T L1
ENSG00000134644 PUM1 -177042 sc-eQTL 9.35e-01 -0.00556 0.0682 0.639 Other_T L1
ENSG00000162511 LAPTM5 131175 sc-eQTL 9.49e-01 0.00356 0.0559 0.639 Other_T L1
ENSG00000162517 PEF1 -755947 sc-eQTL 4.14e-01 0.061 0.0745 0.639 Other_T L1
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 8.88e-01 0.0129 0.0915 0.639 Other_T L1
ENSG00000287510 AL137857.1 157256 sc-eQTL 6.00e-01 -0.05 0.0952 0.639 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -407839 sc-eQTL 9.79e-01 -0.00299 0.116 0.625 B_Activated L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 9.60e-01 0.00585 0.117 0.625 B_Activated L2
ENSG00000134644 PUM1 -177042 sc-eQTL 9.11e-02 -0.183 0.108 0.625 B_Activated L2
ENSG00000162510 MATN1 165364 sc-eQTL 9.08e-01 -0.0109 0.0948 0.625 B_Activated L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 6.79e-01 0.0274 0.0661 0.625 B_Activated L2
ENSG00000162517 PEF1 -755947 sc-eQTL 9.49e-01 -0.00715 0.113 0.625 B_Activated L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 8.68e-01 0.0177 0.107 0.625 B_Activated L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 8.48e-01 0.0182 0.0944 0.625 B_Activated L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 9.67e-01 -0.00431 0.106 0.639 B_Intermediate L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 1.39e-01 -0.13 0.0875 0.639 B_Intermediate L2
ENSG00000134644 PUM1 -177042 sc-eQTL 6.69e-01 0.0355 0.083 0.639 B_Intermediate L2
ENSG00000162510 MATN1 165364 sc-eQTL 3.47e-01 -0.0812 0.0862 0.639 B_Intermediate L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 2.22e-01 -0.0648 0.0528 0.639 B_Intermediate L2
ENSG00000162517 PEF1 -755947 sc-eQTL 7.45e-01 -0.032 0.0984 0.639 B_Intermediate L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 7.76e-01 -0.0212 0.0744 0.639 B_Intermediate L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 4.68e-02 0.165 0.0825 0.639 B_Intermediate L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 7.97e-02 -0.181 0.103 0.638 B_Memory L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 9.74e-01 -0.00308 0.0953 0.638 B_Memory L2
ENSG00000134644 PUM1 -177042 sc-eQTL 5.31e-01 -0.052 0.0829 0.638 B_Memory L2
ENSG00000162510 MATN1 165364 sc-eQTL 9.78e-01 -0.0022 0.0794 0.638 B_Memory L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 1.92e-01 -0.0916 0.0701 0.638 B_Memory L2
ENSG00000162517 PEF1 -755947 sc-eQTL 8.52e-01 0.0175 0.0939 0.638 B_Memory L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 6.85e-01 -0.0327 0.0805 0.638 B_Memory L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 2.52e-01 0.108 0.094 0.638 B_Memory L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 3.70e-01 0.0845 0.0941 0.639 B_Naive1 L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 7.34e-01 -0.0277 0.0814 0.639 B_Naive1 L2
ENSG00000134644 PUM1 -177042 sc-eQTL 5.93e-01 -0.0384 0.0717 0.639 B_Naive1 L2
ENSG00000162510 MATN1 165364 sc-eQTL 1.76e-01 0.0984 0.0725 0.639 B_Naive1 L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 9.06e-01 -0.00573 0.0486 0.639 B_Naive1 L2
ENSG00000162517 PEF1 -755947 sc-eQTL 5.39e-01 0.0527 0.0857 0.639 B_Naive1 L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 9.63e-01 -0.00294 0.0639 0.639 B_Naive1 L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 4.12e-01 0.0648 0.0788 0.639 B_Naive1 L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 5.00e-01 -0.0674 0.0998 0.639 B_Naive2 L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 5.86e-01 0.045 0.0825 0.639 B_Naive2 L2
ENSG00000134644 PUM1 -177042 sc-eQTL 4.75e-01 -0.0578 0.0806 0.639 B_Naive2 L2
ENSG00000162510 MATN1 165364 sc-eQTL 2.62e-01 0.087 0.0773 0.639 B_Naive2 L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 7.99e-01 -0.0134 0.0526 0.639 B_Naive2 L2
ENSG00000162517 PEF1 -755947 sc-eQTL 3.51e-01 -0.0893 0.0956 0.639 B_Naive2 L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 2.57e-01 0.0869 0.0764 0.639 B_Naive2 L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 5.46e-01 0.05 0.0827 0.639 B_Naive2 L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 9.12e-01 -0.0111 0.101 0.639 CD4_CTL L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 5.49e-01 -0.0594 0.099 0.639 CD4_CTL L2
ENSG00000134644 PUM1 -177042 sc-eQTL 6.02e-01 -0.0507 0.0971 0.639 CD4_CTL L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 9.34e-01 -0.00722 0.0866 0.639 CD4_CTL L2
ENSG00000162517 PEF1 -755947 sc-eQTL 1.36e-01 -0.132 0.0883 0.639 CD4_CTL L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 8.87e-02 -0.161 0.0941 0.639 CD4_CTL L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 8.68e-01 0.0139 0.0836 0.639 CD4_CTL L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 1.04e-01 -0.128 0.0782 0.639 CD4_Naive L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 6.67e-01 -0.0301 0.0697 0.639 CD4_Naive L2
ENSG00000134644 PUM1 -177042 sc-eQTL 2.75e-01 -0.0608 0.0556 0.639 CD4_Naive L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 2.62e-01 0.0669 0.0595 0.639 CD4_Naive L2
ENSG00000162517 PEF1 -755947 sc-eQTL 4.46e-01 -0.0499 0.0654 0.639 CD4_Naive L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 9.04e-01 -0.00732 0.0606 0.639 CD4_Naive L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 8.33e-01 -0.0147 0.0696 0.639 CD4_Naive L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 7.75e-01 -0.029 0.101 0.639 CD4_TCM L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 8.41e-01 -0.0164 0.0816 0.639 CD4_TCM L2
ENSG00000134644 PUM1 -177042 sc-eQTL 3.05e-01 0.0741 0.0721 0.639 CD4_TCM L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 9.81e-01 -0.00145 0.06 0.639 CD4_TCM L2
ENSG00000162517 PEF1 -755947 sc-eQTL 4.51e-01 0.0607 0.0803 0.639 CD4_TCM L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 7.04e-01 -0.0289 0.0761 0.639 CD4_TCM L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 1.72e-01 0.116 0.0844 0.639 CD4_TCM L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 7.68e-01 0.0291 0.0986 0.639 CD4_TEM L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 3.66e-01 -0.0849 0.0938 0.639 CD4_TEM L2
ENSG00000134644 PUM1 -177042 sc-eQTL 7.96e-01 0.0202 0.0783 0.639 CD4_TEM L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 2.88e-01 0.0842 0.079 0.639 CD4_TEM L2
ENSG00000162517 PEF1 -755947 sc-eQTL 1.89e-01 -0.116 0.0884 0.639 CD4_TEM L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 9.26e-01 0.00864 0.0927 0.639 CD4_TEM L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 5.64e-01 0.0527 0.0912 0.639 CD4_TEM L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 2.64e-01 0.12 0.107 0.639 CD8_CTL L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 3.90e-01 0.0708 0.0823 0.639 CD8_CTL L2
ENSG00000134644 PUM1 -177042 sc-eQTL 3.06e-01 -0.082 0.0798 0.639 CD8_CTL L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 3.98e-01 0.075 0.0885 0.639 CD8_CTL L2
ENSG00000162517 PEF1 -755947 sc-eQTL 5.25e-01 -0.0491 0.0771 0.639 CD8_CTL L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 4.19e-01 0.0753 0.093 0.639 CD8_CTL L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 5.19e-01 0.0565 0.0876 0.639 CD8_CTL L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 9.22e-01 0.00972 0.0987 0.639 CD8_Naive L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 9.29e-01 -0.00757 0.0851 0.639 CD8_Naive L2
ENSG00000134644 PUM1 -177042 sc-eQTL 1.44e-01 -0.0998 0.0681 0.639 CD8_Naive L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 9.42e-01 0.00474 0.0656 0.639 CD8_Naive L2
ENSG00000162517 PEF1 -755947 sc-eQTL 7.89e-01 0.0245 0.0912 0.639 CD8_Naive L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 5.70e-01 0.0466 0.0818 0.639 CD8_Naive L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 9.54e-01 -0.0051 0.0892 0.639 CD8_Naive L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 5.37e-01 -0.0677 0.109 0.644 CD8_TCM L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 1.13e-01 0.159 0.0998 0.644 CD8_TCM L2
ENSG00000134644 PUM1 -177042 sc-eQTL 8.95e-01 0.0124 0.0944 0.644 CD8_TCM L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 1.13e-01 0.156 0.0982 0.644 CD8_TCM L2
ENSG00000162517 PEF1 -755947 sc-eQTL 2.59e-01 -0.114 0.101 0.644 CD8_TCM L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 4.75e-01 0.0653 0.0913 0.644 CD8_TCM L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 9.33e-01 0.00782 0.0924 0.644 CD8_TCM L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 2.70e-01 -0.115 0.104 0.639 CD8_TEM L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 1.34e-01 -0.149 0.099 0.639 CD8_TEM L2
ENSG00000134644 PUM1 -177042 sc-eQTL 9.89e-01 -0.00138 0.102 0.639 CD8_TEM L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 7.49e-01 -0.0307 0.0957 0.639 CD8_TEM L2
ENSG00000162517 PEF1 -755947 sc-eQTL 7.97e-01 -0.0232 0.0901 0.639 CD8_TEM L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 2.95e-01 0.104 0.099 0.639 CD8_TEM L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 9.72e-01 0.00317 0.0899 0.639 CD8_TEM L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 4.99e-01 -0.0703 0.104 0.639 MAIT L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 9.42e-01 -0.00672 0.0921 0.639 MAIT L2
ENSG00000134644 PUM1 -177042 sc-eQTL 6.89e-01 -0.0354 0.0883 0.639 MAIT L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 6.65e-01 0.0361 0.0833 0.639 MAIT L2
ENSG00000162517 PEF1 -755947 sc-eQTL 7.38e-01 -0.0306 0.0915 0.639 MAIT L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 9.12e-02 0.156 0.0922 0.639 MAIT L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 2.83e-01 -0.103 0.0954 0.639 MAIT L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 7.97e-01 0.0274 0.106 0.633 NK_CD56bright L2
ENSG00000121753 ADGRB2 -875944 sc-eQTL 9.21e-01 -0.00828 0.0832 0.633 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 3.78e-02 -0.186 0.0889 0.633 NK_CD56bright L2
ENSG00000134644 PUM1 -177042 sc-eQTL 5.83e-02 0.178 0.0935 0.633 NK_CD56bright L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 7.30e-01 0.0322 0.093 0.633 NK_CD56bright L2
ENSG00000162517 PEF1 -755947 sc-eQTL 6.01e-01 0.0473 0.0903 0.633 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 5.00e-01 -0.063 0.0934 0.633 NK_CD56bright L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 5.38e-01 -0.0568 0.092 0.633 NK_CD56bright L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 5.62e-01 -0.0575 0.099 0.64 NK_CD56dim L2
ENSG00000121753 ADGRB2 -875944 sc-eQTL 7.28e-01 -0.0303 0.0871 0.64 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 3.66e-01 -0.0663 0.0731 0.64 NK_CD56dim L2
ENSG00000134644 PUM1 -177042 sc-eQTL 5.22e-01 -0.0482 0.0751 0.64 NK_CD56dim L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 4.73e-01 0.0575 0.08 0.64 NK_CD56dim L2
ENSG00000162517 PEF1 -755947 sc-eQTL 7.26e-02 0.128 0.0708 0.64 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 5.09e-01 0.0663 0.1 0.64 NK_CD56dim L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 8.25e-03 0.217 0.0815 0.64 NK_CD56dim L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 6.97e-01 -0.0414 0.106 0.63 NK_HLA L2
ENSG00000121753 ADGRB2 -875944 sc-eQTL 8.49e-01 -0.0161 0.0843 0.63 NK_HLA L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 1.27e-01 -0.144 0.0942 0.63 NK_HLA L2
ENSG00000134644 PUM1 -177042 sc-eQTL 3.49e-01 -0.0865 0.0921 0.63 NK_HLA L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 5.91e-01 0.0474 0.0881 0.63 NK_HLA L2
ENSG00000162517 PEF1 -755947 sc-eQTL 9.45e-02 -0.166 0.0986 0.63 NK_HLA L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 3.42e-01 0.0891 0.0936 0.63 NK_HLA L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 2.63e-04 0.326 0.0876 0.63 NK_HLA L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 1.15e-01 0.153 0.0967 0.64 NK_cytokine L2
ENSG00000121753 ADGRB2 -875944 sc-eQTL 8.13e-01 0.0208 0.0879 0.64 NK_cytokine L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 1.94e-01 -0.0985 0.0756 0.64 NK_cytokine L2
ENSG00000134644 PUM1 -177042 sc-eQTL 7.50e-02 -0.146 0.0815 0.64 NK_cytokine L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 8.22e-01 0.0203 0.0904 0.64 NK_cytokine L2
ENSG00000162517 PEF1 -755947 sc-eQTL 6.62e-01 -0.0337 0.077 0.64 NK_cytokine L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 8.55e-01 0.0176 0.0958 0.64 NK_cytokine L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 1.67e-01 0.123 0.0887 0.64 NK_cytokine L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 3.08e-01 0.117 0.115 0.637 PB L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 3.50e-01 -0.125 0.133 0.637 PB L2
ENSG00000134644 PUM1 -177042 sc-eQTL 4.48e-01 -0.0881 0.116 0.637 PB L2
ENSG00000162510 MATN1 165364 sc-eQTL 7.65e-01 -0.0324 0.108 0.637 PB L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 5.71e-01 0.0439 0.0772 0.637 PB L2
ENSG00000162517 PEF1 -755947 sc-eQTL 1.34e-01 0.178 0.118 0.637 PB L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 8.30e-01 0.0227 0.106 0.637 PB L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 4.19e-01 -0.0911 0.112 0.637 PB L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 4.35e-01 0.0599 0.0765 0.637 Pro_T L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 2.27e-01 -0.118 0.0969 0.637 Pro_T L2
ENSG00000134644 PUM1 -177042 sc-eQTL 4.02e-01 0.076 0.0906 0.637 Pro_T L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 7.61e-01 -0.0199 0.0651 0.637 Pro_T L2
ENSG00000162517 PEF1 -755947 sc-eQTL 1.90e-01 -0.125 0.0951 0.637 Pro_T L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 1.39e-02 -0.222 0.0897 0.637 Pro_T L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 6.30e-01 0.0404 0.0836 0.637 Pro_T L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 7.44e-01 0.0334 0.102 0.639 Treg L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 8.59e-01 -0.0175 0.0987 0.639 Treg L2
ENSG00000134644 PUM1 -177042 sc-eQTL 1.72e-01 -0.108 0.0787 0.639 Treg L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 9.65e-01 0.00395 0.0905 0.639 Treg L2
ENSG00000162517 PEF1 -755947 sc-eQTL 7.81e-01 0.0272 0.0977 0.639 Treg L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 2.20e-01 0.113 0.0919 0.639 Treg L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 6.38e-01 0.0434 0.092 0.639 Treg L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 5.92e-01 -0.0548 0.102 0.644 cDC L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 9.08e-01 -0.0128 0.111 0.644 cDC L2
ENSG00000134644 PUM1 -177042 sc-eQTL 2.44e-01 -0.111 0.0947 0.644 cDC L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 4.62e-01 0.0491 0.0666 0.644 cDC L2
ENSG00000162517 PEF1 -755947 sc-eQTL 9.43e-01 0.00694 0.0965 0.644 cDC L2
ENSG00000168528 SERINC2 -520616 sc-eQTL 2.67e-01 0.095 0.0853 0.644 cDC L2
ENSG00000284543 LINC01226 -617277 sc-eQTL 8.27e-02 -0.146 0.0834 0.644 cDC L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 1.44e-02 0.22 0.089 0.644 cDC L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 7.90e-01 0.0215 0.0807 0.639 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 6.13e-01 -0.0456 0.09 0.639 cMono_IL1B L2
ENSG00000134644 PUM1 -177042 sc-eQTL 3.33e-01 0.059 0.0608 0.639 cMono_IL1B L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 5.11e-01 0.0352 0.0534 0.639 cMono_IL1B L2
ENSG00000162512 SDC3 -19809 sc-eQTL 1.03e-01 -0.164 0.1 0.639 cMono_IL1B L2
ENSG00000162517 PEF1 -755947 sc-eQTL 4.65e-01 -0.0602 0.0822 0.639 cMono_IL1B L2
ENSG00000168528 SERINC2 -520616 sc-eQTL 1.81e-01 0.136 0.102 0.639 cMono_IL1B L2
ENSG00000284543 LINC01226 -617277 sc-eQTL 5.49e-01 -0.054 0.0901 0.639 cMono_IL1B L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 6.84e-02 0.153 0.0834 0.639 cMono_IL1B L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 9.27e-01 0.00784 0.085 0.639 cMono_S100A L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 7.03e-01 0.0383 0.1 0.639 cMono_S100A L2
ENSG00000134644 PUM1 -177042 sc-eQTL 8.53e-02 0.125 0.072 0.639 cMono_S100A L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 9.64e-01 -0.00254 0.0558 0.639 cMono_S100A L2
ENSG00000162512 SDC3 -19809 sc-eQTL 7.09e-01 -0.036 0.0963 0.639 cMono_S100A L2
ENSG00000162517 PEF1 -755947 sc-eQTL 7.35e-01 -0.0294 0.0869 0.639 cMono_S100A L2
ENSG00000168528 SERINC2 -520616 sc-eQTL 3.17e-01 0.102 0.102 0.639 cMono_S100A L2
ENSG00000284543 LINC01226 -617277 sc-eQTL 7.40e-01 -0.0275 0.0828 0.639 cMono_S100A L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 1.78e-01 -0.112 0.0828 0.639 cMono_S100A L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 6.02e-01 -0.0668 0.128 0.655 gdT L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 2.77e-01 -0.119 0.109 0.655 gdT L2
ENSG00000134644 PUM1 -177042 sc-eQTL 9.05e-01 -0.0135 0.113 0.655 gdT L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 9.84e-01 -0.00242 0.123 0.655 gdT L2
ENSG00000162517 PEF1 -755947 sc-eQTL 5.66e-02 0.213 0.111 0.655 gdT L2
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 9.88e-01 -0.00168 0.113 0.655 gdT L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 8.34e-01 0.023 0.11 0.655 gdT L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 8.95e-01 0.0126 0.0951 0.647 intMono L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 8.15e-02 0.178 0.102 0.647 intMono L2
ENSG00000134644 PUM1 -177042 sc-eQTL 3.53e-01 -0.0806 0.0866 0.647 intMono L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 1.57e-01 0.0963 0.0677 0.647 intMono L2
ENSG00000162512 SDC3 -19809 sc-eQTL 2.98e-01 -0.097 0.093 0.647 intMono L2
ENSG00000162517 PEF1 -755947 sc-eQTL 1.52e-02 0.236 0.0965 0.647 intMono L2
ENSG00000168528 SERINC2 -520616 sc-eQTL 2.80e-01 0.105 0.0973 0.647 intMono L2
ENSG00000284543 LINC01226 -617277 sc-eQTL 5.66e-01 -0.0531 0.0924 0.647 intMono L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 1.83e-01 0.123 0.0921 0.647 intMono L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 9.23e-01 0.00849 0.0881 0.638 ncMono L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 4.53e-01 -0.0705 0.0938 0.638 ncMono L2
ENSG00000134644 PUM1 -177042 sc-eQTL 6.14e-01 -0.0387 0.0767 0.638 ncMono L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 4.28e-01 0.0552 0.0696 0.638 ncMono L2
ENSG00000162512 SDC3 -19809 sc-eQTL 2.36e-01 -0.0926 0.0779 0.638 ncMono L2
ENSG00000162517 PEF1 -755947 sc-eQTL 8.47e-01 -0.0173 0.0896 0.638 ncMono L2
ENSG00000168528 SERINC2 -520616 sc-eQTL 2.74e-01 0.0932 0.085 0.638 ncMono L2
ENSG00000284543 LINC01226 -617277 sc-eQTL 2.23e-02 0.194 0.0841 0.638 ncMono L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 6.53e-01 -0.0397 0.0883 0.638 ncMono L2
ENSG00000060688 SNRNP40 -407839 sc-eQTL 2.73e-01 -0.11 0.0999 0.624 pDC L2
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 3.81e-01 -0.0964 0.11 0.624 pDC L2
ENSG00000134644 PUM1 -177042 sc-eQTL 5.63e-01 0.0528 0.0912 0.624 pDC L2
ENSG00000162511 LAPTM5 131175 sc-eQTL 6.09e-01 0.0435 0.0848 0.624 pDC L2
ENSG00000162517 PEF1 -755947 sc-eQTL 9.03e-01 -0.0135 0.11 0.624 pDC L2
ENSG00000168528 SERINC2 -520616 sc-eQTL 4.22e-01 0.0828 0.103 0.624 pDC L2
ENSG00000284543 LINC01226 -617277 sc-eQTL 8.21e-01 -0.0181 0.0799 0.624 pDC L2
ENSG00000287510 AL137857.1 157256 sc-eQTL 4.60e-01 0.0694 0.0938 0.624 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -407839 sc-eQTL 2.34e-01 -0.121 0.101 0.639 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 5.96e-01 -0.0448 0.0843 0.639 B_Memory LOneK1K
ENSG00000134644 PUM1 -177042 sc-eQTL 3.75e-01 -0.0663 0.0746 0.639 B_Memory LOneK1K
ENSG00000162510 MATN1 165364 sc-eQTL 1.78e-01 -0.115 0.0849 0.639 B_Memory LOneK1K
ENSG00000162511 LAPTM5 131175 sc-eQTL 2.28e-01 -0.0645 0.0534 0.639 B_Memory LOneK1K
ENSG00000162517 PEF1 -755947 sc-eQTL 6.88e-01 -0.0357 0.0887 0.639 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 9.84e-01 -0.00139 0.0708 0.639 B_Memory LOneK1K
ENSG00000287510 AL137857.1 157256 sc-eQTL 2.06e-02 0.178 0.0762 0.639 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -407839 sc-eQTL 7.86e-01 0.0248 0.0912 0.639 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 9.80e-01 0.00177 0.0722 0.639 B_Naive LOneK1K
ENSG00000134644 PUM1 -177042 sc-eQTL 3.75e-01 -0.0606 0.0681 0.639 B_Naive LOneK1K
ENSG00000162510 MATN1 165364 sc-eQTL 3.28e-01 0.0643 0.0656 0.639 B_Naive LOneK1K
ENSG00000162511 LAPTM5 131175 sc-eQTL 7.03e-01 0.0176 0.0462 0.639 B_Naive LOneK1K
ENSG00000162517 PEF1 -755947 sc-eQTL 9.61e-01 0.00413 0.0845 0.639 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 8.41e-01 -0.012 0.0597 0.639 B_Naive LOneK1K
ENSG00000287510 AL137857.1 157256 sc-eQTL 2.86e-01 0.0757 0.0708 0.639 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -407839 sc-eQTL 6.59e-01 0.0339 0.0767 0.639 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 9.85e-01 -0.00162 0.0869 0.639 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -177042 sc-eQTL 1.39e-01 0.0818 0.0551 0.639 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 131175 sc-eQTL 5.62e-01 0.0283 0.0487 0.639 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -19809 sc-eQTL 9.96e-02 -0.163 0.0988 0.639 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -755947 sc-eQTL 2.98e-01 -0.0727 0.0697 0.639 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -520616 sc-eQTL 2.53e-01 0.117 0.102 0.639 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -617277 sc-eQTL 5.73e-01 -0.0473 0.0838 0.639 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 157256 sc-eQTL 6.62e-01 0.0344 0.0784 0.639 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -407839 sc-eQTL 8.74e-01 -0.0134 0.084 0.64 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 3.88e-01 0.0794 0.0918 0.64 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -177042 sc-eQTL 1.59e-01 -0.106 0.075 0.64 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 131175 sc-eQTL 5.55e-01 0.0356 0.0602 0.64 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -19809 sc-eQTL 1.62e-01 -0.123 0.0876 0.64 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -755947 sc-eQTL 2.91e-01 0.0844 0.0798 0.64 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -520616 sc-eQTL 4.71e-01 0.0659 0.0912 0.64 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -617277 sc-eQTL 2.32e-01 0.104 0.0863 0.64 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 157256 sc-eQTL 8.13e-01 -0.0206 0.0867 0.64 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -407839 sc-eQTL 6.05e-01 0.0491 0.0948 0.64 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -875944 sc-eQTL 7.86e-01 -0.022 0.0807 0.64 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -408033 sc-eQTL 9.28e-02 -0.109 0.0643 0.64 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -177042 sc-eQTL 1.95e-01 -0.0919 0.0707 0.64 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 131175 sc-eQTL 4.73e-01 0.057 0.0792 0.64 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -755947 sc-eQTL 2.03e-01 0.0767 0.06 0.64 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 170445 sc-eQTL 1.50e-01 0.132 0.091 0.64 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 157256 sc-eQTL 2.08e-03 0.241 0.0772 0.64 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -408033 eQTL 4.01e-02 0.0372 0.0181 0.0 0.0 0.402

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -408033 9.17e-06 1.21e-05 5.66e-06 3.47e-06 1.3e-06 2.7e-06 1.09e-05 1.01e-06 8.98e-06 3.41e-06 6.85e-06 4.76e-06 1.24e-05 3.5e-06 4.1e-06 6.64e-06 3.59e-06 5.77e-06 2.66e-06 9.88e-07 5.19e-06 8.12e-06 5.84e-06 1.91e-06 9.83e-06 2.41e-06 3.96e-06 1.55e-06 6.21e-06 7.61e-06 3.5e-06 2.57e-07 6.46e-07 1.82e-06 1.96e-06 1.13e-06 9.08e-07 5.58e-07 1.3e-06 3.74e-07 3.02e-07 8.47e-06 1.43e-06 3.84e-07 7.66e-07 1.67e-06 9.92e-07 2.3e-07 2.71e-07
ENSG00000186056 \N 170445 4.56e-05 3.42e-05 1.6e-05 1.24e-05 3.09e-06 7.51e-06 3.03e-05 3.42e-06 2e-05 1.16e-05 2.63e-05 1.02e-05 4.46e-05 9.38e-06 7.94e-06 1.86e-05 1.44e-05 1.84e-05 8.86e-06 4.75e-06 1.28e-05 3.03e-05 2.61e-05 1.07e-05 3.59e-05 5.98e-06 1.14e-05 8.98e-06 2.12e-05 1.68e-05 1.21e-05 9.89e-07 1.4e-06 4.85e-06 7.59e-06 4.55e-06 2.27e-06 2.96e-06 3.44e-06 1.38e-06 1.08e-06 3.12e-05 4.93e-06 5.95e-07 2.79e-06 4.53e-06 3.67e-06 1.11e-06 7.82e-07