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Genes within 1Mb (chr1:30884669:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -412119 sc-eQTL 9.27e-01 0.00785 0.0857 0.63 B L1
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 7.63e-01 -0.0207 0.0686 0.63 B L1
ENSG00000134644 PUM1 -181322 sc-eQTL 3.75e-01 -0.0511 0.0575 0.63 B L1
ENSG00000162510 MATN1 161084 sc-eQTL 6.20e-01 0.03 0.0605 0.63 B L1
ENSG00000162511 LAPTM5 126895 sc-eQTL 6.44e-01 -0.0219 0.0474 0.63 B L1
ENSG00000162517 PEF1 -760227 sc-eQTL 4.43e-01 -0.0549 0.0714 0.63 B L1
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 9.21e-01 0.00548 0.0555 0.63 B L1
ENSG00000287510 AL137857.1 152976 sc-eQTL 1.73e-01 0.0894 0.0654 0.63 B L1
ENSG00000060688 SNRNP40 -412119 sc-eQTL 2.38e-01 -0.0884 0.0747 0.63 CD4T L1
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 8.07e-01 -0.0143 0.0585 0.63 CD4T L1
ENSG00000134644 PUM1 -181322 sc-eQTL 3.66e-01 -0.0471 0.052 0.63 CD4T L1
ENSG00000162511 LAPTM5 126895 sc-eQTL 6.80e-01 0.0239 0.0577 0.63 CD4T L1
ENSG00000162517 PEF1 -760227 sc-eQTL 6.04e-01 -0.0313 0.0604 0.63 CD4T L1
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 4.32e-01 -0.0406 0.0516 0.63 CD4T L1
ENSG00000287510 AL137857.1 152976 sc-eQTL 3.90e-01 0.0532 0.0618 0.63 CD4T L1
ENSG00000060688 SNRNP40 -412119 sc-eQTL 8.18e-01 0.0229 0.0992 0.63 CD8T L1
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 4.18e-01 0.0535 0.0659 0.63 CD8T L1
ENSG00000134644 PUM1 -181322 sc-eQTL 2.90e-02 -0.126 0.0575 0.63 CD8T L1
ENSG00000162511 LAPTM5 126895 sc-eQTL 2.68e-01 0.0625 0.0563 0.63 CD8T L1
ENSG00000162517 PEF1 -760227 sc-eQTL 4.55e-01 -0.0519 0.0694 0.63 CD8T L1
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 2.04e-01 0.0839 0.0659 0.63 CD8T L1
ENSG00000287510 AL137857.1 152976 sc-eQTL 5.92e-01 0.0446 0.0831 0.63 CD8T L1
ENSG00000060688 SNRNP40 -412119 sc-eQTL 1.39e-01 -0.127 0.0856 0.631 DC L1
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 8.48e-02 -0.175 0.101 0.631 DC L1
ENSG00000134644 PUM1 -181322 sc-eQTL 8.17e-02 -0.139 0.0792 0.631 DC L1
ENSG00000162511 LAPTM5 126895 sc-eQTL 2.97e-02 0.123 0.0563 0.631 DC L1
ENSG00000162517 PEF1 -760227 sc-eQTL 8.28e-01 0.0201 0.0924 0.631 DC L1
ENSG00000168528 SERINC2 -524896 sc-eQTL 3.31e-01 0.0913 0.0938 0.631 DC L1
ENSG00000284543 LINC01226 -621557 sc-eQTL 7.54e-01 -0.0196 0.0623 0.631 DC L1
ENSG00000287510 AL137857.1 152976 sc-eQTL 1.67e-01 0.124 0.0897 0.631 DC L1
ENSG00000060688 SNRNP40 -412119 sc-eQTL 8.27e-01 -0.0146 0.0667 0.63 Mono L1
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 9.76e-01 0.00245 0.0827 0.63 Mono L1
ENSG00000134644 PUM1 -181322 sc-eQTL 2.44e-01 0.0618 0.0528 0.63 Mono L1
ENSG00000162511 LAPTM5 126895 sc-eQTL 6.80e-01 0.0201 0.0487 0.63 Mono L1
ENSG00000162512 SDC3 -24089 sc-eQTL 2.37e-01 -0.111 0.0934 0.63 Mono L1
ENSG00000162517 PEF1 -760227 sc-eQTL 7.49e-01 -0.0211 0.0657 0.63 Mono L1
ENSG00000168528 SERINC2 -524896 sc-eQTL 2.63e-01 0.112 0.1 0.63 Mono L1
ENSG00000284543 LINC01226 -621557 sc-eQTL 7.76e-01 -0.0252 0.0886 0.63 Mono L1
ENSG00000287510 AL137857.1 152976 sc-eQTL 9.00e-01 0.00975 0.0774 0.63 Mono L1
ENSG00000060688 SNRNP40 -412119 sc-eQTL 4.86e-01 0.0655 0.0937 0.631 NK L1
ENSG00000121753 ADGRB2 -880224 sc-eQTL 8.59e-01 -0.0144 0.0808 0.631 NK L1
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 1.44e-02 -0.156 0.0633 0.631 NK L1
ENSG00000134644 PUM1 -181322 sc-eQTL 7.17e-01 -0.0244 0.0674 0.631 NK L1
ENSG00000162511 LAPTM5 126895 sc-eQTL 3.50e-01 0.0725 0.0774 0.631 NK L1
ENSG00000162517 PEF1 -760227 sc-eQTL 8.69e-02 0.0967 0.0562 0.631 NK L1
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 3.28e-01 0.0852 0.0869 0.631 NK L1
ENSG00000287510 AL137857.1 152976 sc-eQTL 1.55e-02 0.194 0.0793 0.631 NK L1
ENSG00000060688 SNRNP40 -412119 sc-eQTL 9.63e-01 0.00326 0.0704 0.63 Other_T L1
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 1.03e-01 -0.123 0.0748 0.63 Other_T L1
ENSG00000134644 PUM1 -181322 sc-eQTL 8.77e-01 0.0105 0.0677 0.63 Other_T L1
ENSG00000162511 LAPTM5 126895 sc-eQTL 8.56e-01 -0.0101 0.0555 0.63 Other_T L1
ENSG00000162517 PEF1 -760227 sc-eQTL 4.70e-01 0.0536 0.074 0.63 Other_T L1
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 9.31e-01 0.00786 0.0908 0.63 Other_T L1
ENSG00000287510 AL137857.1 152976 sc-eQTL 8.21e-01 -0.0214 0.0946 0.63 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -412119 sc-eQTL 9.64e-01 0.00525 0.115 0.617 B_Activated L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 6.99e-01 -0.0447 0.115 0.617 B_Activated L2
ENSG00000134644 PUM1 -181322 sc-eQTL 9.39e-02 -0.179 0.106 0.617 B_Activated L2
ENSG00000162510 MATN1 161084 sc-eQTL 6.57e-01 -0.0417 0.0938 0.617 B_Activated L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 8.20e-01 0.0149 0.0654 0.617 B_Activated L2
ENSG00000162517 PEF1 -760227 sc-eQTL 9.19e-01 0.0114 0.111 0.617 B_Activated L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 9.50e-01 -0.00667 0.106 0.617 B_Activated L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 9.98e-01 0.000222 0.0935 0.617 B_Activated L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 9.31e-01 -0.00913 0.105 0.631 B_Intermediate L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 1.43e-01 -0.128 0.0869 0.631 B_Intermediate L2
ENSG00000134644 PUM1 -181322 sc-eQTL 7.89e-01 0.0221 0.0824 0.631 B_Intermediate L2
ENSG00000162510 MATN1 161084 sc-eQTL 3.85e-01 -0.0746 0.0856 0.631 B_Intermediate L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 1.89e-01 -0.0691 0.0524 0.631 B_Intermediate L2
ENSG00000162517 PEF1 -760227 sc-eQTL 7.78e-01 -0.0276 0.0977 0.631 B_Intermediate L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 7.45e-01 -0.024 0.0739 0.631 B_Intermediate L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 8.38e-02 0.143 0.0821 0.631 B_Intermediate L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 1.10e-01 -0.163 0.102 0.629 B_Memory L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 6.38e-01 0.0445 0.0943 0.629 B_Memory L2
ENSG00000134644 PUM1 -181322 sc-eQTL 7.26e-01 -0.0288 0.0821 0.629 B_Memory L2
ENSG00000162510 MATN1 161084 sc-eQTL 8.69e-01 -0.013 0.0786 0.629 B_Memory L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 1.35e-01 -0.104 0.0693 0.629 B_Memory L2
ENSG00000162517 PEF1 -760227 sc-eQTL 8.72e-01 -0.015 0.093 0.629 B_Memory L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 9.81e-01 -0.00191 0.0797 0.629 B_Memory L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 3.67e-01 0.0842 0.0931 0.629 B_Memory L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 2.62e-01 0.105 0.0934 0.63 B_Naive1 L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 7.56e-01 -0.0251 0.0809 0.63 B_Naive1 L2
ENSG00000134644 PUM1 -181322 sc-eQTL 4.00e-01 -0.0601 0.0712 0.63 B_Naive1 L2
ENSG00000162510 MATN1 161084 sc-eQTL 1.86e-01 0.0957 0.0721 0.63 B_Naive1 L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 9.84e-01 0.001 0.0484 0.63 B_Naive1 L2
ENSG00000162517 PEF1 -760227 sc-eQTL 7.68e-01 0.0252 0.0853 0.63 B_Naive1 L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 9.85e-01 0.00119 0.0635 0.63 B_Naive1 L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 3.62e-01 0.0715 0.0783 0.63 B_Naive1 L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 5.11e-01 -0.065 0.0987 0.631 B_Naive2 L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 3.79e-01 0.0719 0.0814 0.631 B_Naive2 L2
ENSG00000134644 PUM1 -181322 sc-eQTL 6.22e-01 -0.0394 0.0798 0.631 B_Naive2 L2
ENSG00000162510 MATN1 161084 sc-eQTL 1.51e-01 0.11 0.0763 0.631 B_Naive2 L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 6.48e-01 -0.0238 0.052 0.631 B_Naive2 L2
ENSG00000162517 PEF1 -760227 sc-eQTL 4.36e-01 -0.0737 0.0946 0.631 B_Naive2 L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 4.24e-01 0.0607 0.0757 0.631 B_Naive2 L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 5.36e-01 0.0507 0.0818 0.631 B_Naive2 L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 8.52e-01 -0.0187 0.1 0.63 CD4_CTL L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 5.05e-01 -0.0658 0.0984 0.63 CD4_CTL L2
ENSG00000134644 PUM1 -181322 sc-eQTL 6.92e-01 -0.0383 0.0966 0.63 CD4_CTL L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 8.02e-01 -0.0216 0.0861 0.63 CD4_CTL L2
ENSG00000162517 PEF1 -760227 sc-eQTL 1.44e-01 -0.129 0.0878 0.63 CD4_CTL L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 8.99e-02 -0.159 0.0935 0.63 CD4_CTL L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 9.20e-01 0.00836 0.0831 0.63 CD4_CTL L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 1.35e-01 -0.117 0.0776 0.63 CD4_Naive L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 9.38e-01 0.00536 0.0692 0.63 CD4_Naive L2
ENSG00000134644 PUM1 -181322 sc-eQTL 2.44e-01 -0.0644 0.0551 0.63 CD4_Naive L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 4.49e-01 0.0448 0.0591 0.63 CD4_Naive L2
ENSG00000162517 PEF1 -760227 sc-eQTL 5.51e-01 -0.0388 0.0649 0.63 CD4_Naive L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 6.92e-01 -0.0239 0.0601 0.63 CD4_Naive L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 9.76e-01 0.00205 0.069 0.63 CD4_Naive L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 8.56e-01 -0.0182 0.1 0.63 CD4_TCM L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 6.43e-01 -0.0375 0.0807 0.63 CD4_TCM L2
ENSG00000134644 PUM1 -181322 sc-eQTL 3.15e-01 0.0718 0.0713 0.63 CD4_TCM L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 9.82e-01 0.00135 0.0593 0.63 CD4_TCM L2
ENSG00000162517 PEF1 -760227 sc-eQTL 4.42e-01 0.0612 0.0794 0.63 CD4_TCM L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 4.07e-01 -0.0624 0.0751 0.63 CD4_TCM L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 1.92e-01 0.109 0.0835 0.63 CD4_TCM L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 7.28e-01 0.0341 0.098 0.63 CD4_TEM L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 3.76e-01 -0.0826 0.0932 0.63 CD4_TEM L2
ENSG00000134644 PUM1 -181322 sc-eQTL 9.45e-01 0.00536 0.0778 0.63 CD4_TEM L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 3.66e-01 0.0712 0.0785 0.63 CD4_TEM L2
ENSG00000162517 PEF1 -760227 sc-eQTL 2.37e-01 -0.104 0.0878 0.63 CD4_TEM L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 7.51e-01 0.0293 0.092 0.63 CD4_TEM L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 5.74e-01 0.0511 0.0906 0.63 CD4_TEM L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 3.78e-01 0.0941 0.107 0.63 CD8_CTL L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 3.03e-01 0.0844 0.0817 0.63 CD8_CTL L2
ENSG00000134644 PUM1 -181322 sc-eQTL 2.88e-01 -0.0846 0.0793 0.63 CD8_CTL L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 5.96e-01 0.0468 0.0881 0.63 CD8_CTL L2
ENSG00000162517 PEF1 -760227 sc-eQTL 3.70e-01 -0.0688 0.0766 0.63 CD8_CTL L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 4.29e-01 0.0732 0.0925 0.63 CD8_CTL L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 8.89e-01 0.0122 0.0871 0.63 CD8_CTL L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 8.41e-01 -0.0197 0.098 0.63 CD8_Naive L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 9.24e-01 -0.00806 0.0845 0.63 CD8_Naive L2
ENSG00000134644 PUM1 -181322 sc-eQTL 1.28e-01 -0.103 0.0676 0.63 CD8_Naive L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 9.87e-01 -0.00103 0.0652 0.63 CD8_Naive L2
ENSG00000162517 PEF1 -760227 sc-eQTL 6.90e-01 0.0362 0.0906 0.63 CD8_Naive L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 5.27e-01 0.0515 0.0813 0.63 CD8_Naive L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 9.05e-01 0.0105 0.0886 0.63 CD8_Naive L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 5.75e-01 -0.0613 0.109 0.637 CD8_TCM L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 9.79e-02 0.165 0.0993 0.637 CD8_TCM L2
ENSG00000134644 PUM1 -181322 sc-eQTL 8.60e-01 0.0166 0.094 0.637 CD8_TCM L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 2.68e-01 0.109 0.0981 0.637 CD8_TCM L2
ENSG00000162517 PEF1 -760227 sc-eQTL 2.64e-01 -0.112 0.1 0.637 CD8_TCM L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 7.26e-01 0.032 0.0911 0.637 CD8_TCM L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 8.37e-01 0.019 0.0921 0.637 CD8_TCM L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 2.46e-01 -0.12 0.103 0.63 CD8_TEM L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 1.19e-01 -0.154 0.0982 0.63 CD8_TEM L2
ENSG00000134644 PUM1 -181322 sc-eQTL 9.61e-01 0.00495 0.101 0.63 CD8_TEM L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 8.63e-01 -0.0164 0.095 0.63 CD8_TEM L2
ENSG00000162517 PEF1 -760227 sc-eQTL 8.53e-01 -0.0166 0.0895 0.63 CD8_TEM L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 2.96e-01 0.103 0.0983 0.63 CD8_TEM L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 7.90e-01 -0.0238 0.0892 0.63 CD8_TEM L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 5.02e-01 -0.0693 0.103 0.63 MAIT L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 7.80e-01 -0.0255 0.0913 0.63 MAIT L2
ENSG00000134644 PUM1 -181322 sc-eQTL 7.30e-01 -0.0302 0.0875 0.63 MAIT L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 8.46e-01 0.016 0.0825 0.63 MAIT L2
ENSG00000162517 PEF1 -760227 sc-eQTL 8.01e-01 -0.0229 0.0907 0.63 MAIT L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 9.67e-02 0.152 0.0913 0.63 MAIT L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 4.03e-01 -0.0792 0.0946 0.63 MAIT L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 8.96e-01 0.0138 0.106 0.624 NK_CD56bright L2
ENSG00000121753 ADGRB2 -880224 sc-eQTL 4.42e-01 -0.0637 0.0826 0.624 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 3.60e-02 -0.186 0.0883 0.624 NK_CD56bright L2
ENSG00000134644 PUM1 -181322 sc-eQTL 6.01e-02 0.176 0.0929 0.624 NK_CD56bright L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 7.78e-01 0.0262 0.0924 0.624 NK_CD56bright L2
ENSG00000162517 PEF1 -760227 sc-eQTL 6.62e-01 0.0393 0.0898 0.624 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 6.95e-01 -0.0365 0.0929 0.624 NK_CD56bright L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 3.47e-01 -0.0861 0.0913 0.624 NK_CD56bright L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 4.98e-01 -0.0668 0.0984 0.631 NK_CD56dim L2
ENSG00000121753 ADGRB2 -880224 sc-eQTL 7.64e-01 -0.026 0.0867 0.631 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 2.31e-01 -0.0871 0.0726 0.631 NK_CD56dim L2
ENSG00000134644 PUM1 -181322 sc-eQTL 6.31e-01 -0.036 0.0747 0.631 NK_CD56dim L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 4.97e-01 0.0542 0.0796 0.631 NK_CD56dim L2
ENSG00000162517 PEF1 -760227 sc-eQTL 6.29e-02 0.132 0.0703 0.631 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 6.48e-01 0.0457 0.0998 0.631 NK_CD56dim L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 1.39e-02 0.201 0.0812 0.631 NK_CD56dim L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 7.44e-01 -0.0345 0.105 0.621 NK_HLA L2
ENSG00000121753 ADGRB2 -880224 sc-eQTL 8.73e-01 -0.0134 0.0837 0.621 NK_HLA L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 1.54e-01 -0.134 0.0936 0.621 NK_HLA L2
ENSG00000134644 PUM1 -181322 sc-eQTL 3.47e-01 -0.0862 0.0915 0.621 NK_HLA L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 7.13e-01 0.0323 0.0875 0.621 NK_HLA L2
ENSG00000162517 PEF1 -760227 sc-eQTL 8.66e-02 -0.169 0.0978 0.621 NK_HLA L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 3.00e-01 0.0964 0.0928 0.621 NK_HLA L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 2.22e-04 0.327 0.0869 0.621 NK_HLA L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 8.29e-02 0.167 0.0961 0.631 NK_cytokine L2
ENSG00000121753 ADGRB2 -880224 sc-eQTL 7.95e-01 0.0227 0.0874 0.631 NK_cytokine L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 2.31e-01 -0.0904 0.0753 0.631 NK_cytokine L2
ENSG00000134644 PUM1 -181322 sc-eQTL 1.84e-01 -0.108 0.0813 0.631 NK_cytokine L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 8.32e-01 0.0191 0.0899 0.631 NK_cytokine L2
ENSG00000162517 PEF1 -760227 sc-eQTL 9.27e-01 -0.00702 0.0766 0.631 NK_cytokine L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 7.74e-01 0.0274 0.0953 0.631 NK_cytokine L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 1.70e-01 0.122 0.0883 0.631 NK_cytokine L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 3.52e-01 0.106 0.113 0.633 PB L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 3.62e-01 -0.12 0.131 0.633 PB L2
ENSG00000134644 PUM1 -181322 sc-eQTL 5.04e-01 -0.0767 0.114 0.633 PB L2
ENSG00000162510 MATN1 161084 sc-eQTL 7.82e-01 -0.0296 0.107 0.633 PB L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 7.17e-01 0.0278 0.0763 0.633 PB L2
ENSG00000162517 PEF1 -760227 sc-eQTL 1.38e-01 0.174 0.116 0.633 PB L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 7.08e-01 0.0392 0.104 0.633 PB L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 4.55e-01 -0.0831 0.111 0.633 PB L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 4.29e-01 0.0601 0.0759 0.628 Pro_T L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 1.56e-01 -0.137 0.096 0.628 Pro_T L2
ENSG00000134644 PUM1 -181322 sc-eQTL 2.74e-01 0.0984 0.0897 0.628 Pro_T L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 6.89e-01 -0.0258 0.0645 0.628 Pro_T L2
ENSG00000162517 PEF1 -760227 sc-eQTL 1.24e-01 -0.145 0.0942 0.628 Pro_T L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 2.92e-03 -0.266 0.0883 0.628 Pro_T L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 5.93e-01 0.0444 0.0829 0.628 Pro_T L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 6.29e-01 0.0491 0.101 0.63 Treg L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 7.33e-01 -0.0336 0.0981 0.63 Treg L2
ENSG00000134644 PUM1 -181322 sc-eQTL 4.23e-01 -0.063 0.0784 0.63 Treg L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 9.44e-01 -0.00629 0.0899 0.63 Treg L2
ENSG00000162517 PEF1 -760227 sc-eQTL 8.42e-01 0.0193 0.0971 0.63 Treg L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 2.44e-01 0.107 0.0913 0.63 Treg L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 9.10e-01 0.0104 0.0915 0.63 Treg L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 4.38e-01 -0.0784 0.101 0.634 cDC L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 9.05e-01 -0.0131 0.11 0.634 cDC L2
ENSG00000134644 PUM1 -181322 sc-eQTL 2.83e-01 -0.101 0.0938 0.634 cDC L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 3.85e-01 0.0573 0.0658 0.634 cDC L2
ENSG00000162517 PEF1 -760227 sc-eQTL 7.71e-01 0.0278 0.0955 0.634 cDC L2
ENSG00000168528 SERINC2 -524896 sc-eQTL 2.96e-01 0.0885 0.0844 0.634 cDC L2
ENSG00000284543 LINC01226 -621557 sc-eQTL 1.11e-01 -0.132 0.0826 0.634 cDC L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 7.25e-03 0.238 0.0878 0.634 cDC L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 6.95e-01 0.0315 0.08 0.63 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 4.16e-01 -0.0726 0.0892 0.63 cMono_IL1B L2
ENSG00000134644 PUM1 -181322 sc-eQTL 2.28e-01 0.0729 0.0602 0.63 cMono_IL1B L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 4.17e-01 0.0431 0.053 0.63 cMono_IL1B L2
ENSG00000162512 SDC3 -24089 sc-eQTL 2.40e-01 -0.117 0.0996 0.63 cMono_IL1B L2
ENSG00000162517 PEF1 -760227 sc-eQTL 6.76e-01 -0.0341 0.0816 0.63 cMono_IL1B L2
ENSG00000168528 SERINC2 -524896 sc-eQTL 1.84e-01 0.134 0.101 0.63 cMono_IL1B L2
ENSG00000284543 LINC01226 -621557 sc-eQTL 6.79e-01 -0.0371 0.0894 0.63 cMono_IL1B L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 4.48e-02 0.167 0.0826 0.63 cMono_IL1B L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 9.94e-01 -0.000661 0.0842 0.63 cMono_S100A L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 5.91e-01 0.0535 0.0994 0.63 cMono_S100A L2
ENSG00000134644 PUM1 -181322 sc-eQTL 7.41e-02 0.128 0.0714 0.63 cMono_S100A L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 9.79e-01 -0.00149 0.0553 0.63 cMono_S100A L2
ENSG00000162512 SDC3 -24089 sc-eQTL 8.83e-01 -0.0141 0.0955 0.63 cMono_S100A L2
ENSG00000162517 PEF1 -760227 sc-eQTL 5.21e-01 -0.0554 0.0861 0.63 cMono_S100A L2
ENSG00000168528 SERINC2 -524896 sc-eQTL 3.70e-01 0.0906 0.101 0.63 cMono_S100A L2
ENSG00000284543 LINC01226 -621557 sc-eQTL 8.44e-01 -0.0162 0.0821 0.63 cMono_S100A L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 2.66e-01 -0.0917 0.0822 0.63 cMono_S100A L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 6.01e-01 -0.0668 0.128 0.645 gdT L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 4.49e-01 -0.0832 0.11 0.645 gdT L2
ENSG00000134644 PUM1 -181322 sc-eQTL 9.21e-01 -0.0113 0.113 0.645 gdT L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 9.41e-01 -0.00909 0.123 0.645 gdT L2
ENSG00000162517 PEF1 -760227 sc-eQTL 8.72e-02 0.192 0.111 0.645 gdT L2
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 7.18e-01 0.0411 0.113 0.645 gdT L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 7.51e-01 0.035 0.11 0.645 gdT L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 9.09e-01 0.0108 0.0944 0.638 intMono L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 1.08e-01 0.163 0.101 0.638 intMono L2
ENSG00000134644 PUM1 -181322 sc-eQTL 3.09e-01 -0.0875 0.0859 0.638 intMono L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 1.41e-01 0.0992 0.0672 0.638 intMono L2
ENSG00000162512 SDC3 -24089 sc-eQTL 3.96e-01 -0.0784 0.0923 0.638 intMono L2
ENSG00000162517 PEF1 -760227 sc-eQTL 3.37e-02 0.205 0.0961 0.638 intMono L2
ENSG00000168528 SERINC2 -524896 sc-eQTL 1.65e-01 0.134 0.0963 0.638 intMono L2
ENSG00000284543 LINC01226 -621557 sc-eQTL 7.55e-01 -0.0286 0.0917 0.638 intMono L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 1.58e-01 0.129 0.0913 0.638 intMono L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 9.38e-01 0.00682 0.0873 0.629 ncMono L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 4.16e-01 -0.0758 0.0929 0.629 ncMono L2
ENSG00000134644 PUM1 -181322 sc-eQTL 8.81e-01 -0.0114 0.0761 0.629 ncMono L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 4.14e-01 0.0564 0.069 0.629 ncMono L2
ENSG00000162512 SDC3 -24089 sc-eQTL 2.45e-01 -0.0899 0.0772 0.629 ncMono L2
ENSG00000162517 PEF1 -760227 sc-eQTL 8.89e-01 -0.0124 0.0888 0.629 ncMono L2
ENSG00000168528 SERINC2 -524896 sc-eQTL 3.25e-01 0.0832 0.0843 0.629 ncMono L2
ENSG00000284543 LINC01226 -621557 sc-eQTL 1.24e-02 0.21 0.0831 0.629 ncMono L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 6.49e-01 -0.0399 0.0875 0.629 ncMono L2
ENSG00000060688 SNRNP40 -412119 sc-eQTL 1.66e-01 -0.137 0.0988 0.613 pDC L2
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 2.80e-01 -0.118 0.109 0.613 pDC L2
ENSG00000134644 PUM1 -181322 sc-eQTL 9.61e-01 0.0044 0.0905 0.613 pDC L2
ENSG00000162511 LAPTM5 126895 sc-eQTL 4.18e-01 0.0682 0.0839 0.613 pDC L2
ENSG00000162517 PEF1 -760227 sc-eQTL 7.99e-01 -0.0278 0.109 0.613 pDC L2
ENSG00000168528 SERINC2 -524896 sc-eQTL 4.35e-01 0.0796 0.102 0.613 pDC L2
ENSG00000284543 LINC01226 -621557 sc-eQTL 8.29e-01 -0.0172 0.0792 0.613 pDC L2
ENSG00000287510 AL137857.1 152976 sc-eQTL 6.92e-01 0.037 0.0931 0.613 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -412119 sc-eQTL 2.50e-01 -0.116 0.1 0.63 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 6.99e-01 -0.0324 0.0837 0.63 B_Memory LOneK1K
ENSG00000134644 PUM1 -181322 sc-eQTL 4.47e-01 -0.0565 0.0741 0.63 B_Memory LOneK1K
ENSG00000162510 MATN1 161084 sc-eQTL 1.44e-01 -0.124 0.0841 0.63 B_Memory LOneK1K
ENSG00000162511 LAPTM5 126895 sc-eQTL 2.01e-01 -0.0679 0.0529 0.63 B_Memory LOneK1K
ENSG00000162517 PEF1 -760227 sc-eQTL 6.35e-01 -0.0418 0.088 0.63 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 9.48e-01 0.00455 0.0703 0.63 B_Memory LOneK1K
ENSG00000287510 AL137857.1 152976 sc-eQTL 7.81e-02 0.135 0.076 0.63 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -412119 sc-eQTL 6.62e-01 0.0396 0.0905 0.63 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 7.35e-01 0.0243 0.0716 0.63 B_Naive LOneK1K
ENSG00000134644 PUM1 -181322 sc-eQTL 3.19e-01 -0.0675 0.0676 0.63 B_Naive LOneK1K
ENSG00000162510 MATN1 161084 sc-eQTL 2.64e-01 0.0728 0.065 0.63 B_Naive LOneK1K
ENSG00000162511 LAPTM5 126895 sc-eQTL 6.74e-01 0.0193 0.0459 0.63 B_Naive LOneK1K
ENSG00000162517 PEF1 -760227 sc-eQTL 9.43e-01 -0.00597 0.0839 0.63 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 7.38e-01 -0.0198 0.0593 0.63 B_Naive LOneK1K
ENSG00000287510 AL137857.1 152976 sc-eQTL 2.93e-01 0.0741 0.0703 0.63 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -412119 sc-eQTL 6.57e-01 0.0338 0.076 0.63 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 8.69e-01 -0.0142 0.0862 0.63 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -181322 sc-eQTL 9.34e-02 0.092 0.0546 0.63 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 126895 sc-eQTL 5.03e-01 0.0324 0.0483 0.63 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -24089 sc-eQTL 2.49e-01 -0.114 0.0983 0.63 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -760227 sc-eQTL 3.48e-01 -0.0651 0.0692 0.63 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -524896 sc-eQTL 2.73e-01 0.111 0.101 0.63 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -621557 sc-eQTL 7.04e-01 -0.0316 0.0831 0.63 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 152976 sc-eQTL 4.90e-01 0.0538 0.0777 0.63 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -412119 sc-eQTL 8.32e-01 -0.0177 0.0833 0.631 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 3.96e-01 0.0775 0.0911 0.631 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -181322 sc-eQTL 2.46e-01 -0.0867 0.0745 0.631 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 126895 sc-eQTL 5.23e-01 0.0382 0.0597 0.631 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -24089 sc-eQTL 2.00e-01 -0.112 0.087 0.631 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -760227 sc-eQTL 3.16e-01 0.0795 0.0791 0.631 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -524896 sc-eQTL 4.07e-01 0.0751 0.0904 0.631 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -621557 sc-eQTL 1.28e-01 0.13 0.0855 0.631 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 152976 sc-eQTL 8.64e-01 -0.0148 0.086 0.631 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -412119 sc-eQTL 5.90e-01 0.0509 0.0943 0.631 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -880224 sc-eQTL 8.19e-01 -0.0184 0.0803 0.631 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -412313 sc-eQTL 6.61e-02 -0.118 0.0639 0.631 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -181322 sc-eQTL 3.41e-01 -0.0672 0.0704 0.631 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 126895 sc-eQTL 4.84e-01 0.0553 0.0788 0.631 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -760227 sc-eQTL 1.79e-01 0.0806 0.0597 0.631 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 166165 sc-eQTL 1.89e-01 0.119 0.0906 0.631 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 152976 sc-eQTL 3.28e-03 0.229 0.0769 0.631 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -412313 eQTL 2.36e-02 0.0407 0.0179 0.0 0.0 0.411

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -412313 1.25e-06 9.44e-07 3.43e-07 1.15e-06 1.87e-07 4.76e-07 1.1e-06 3.27e-07 1.24e-06 4.11e-07 1.49e-06 5.79e-07 1.62e-06 2.76e-07 4.32e-07 7.54e-07 7.7e-07 5.5e-07 5.72e-07 6.9e-07 4.39e-07 1.17e-06 7.76e-07 5.25e-07 2.06e-06 3.66e-07 7.33e-07 6.93e-07 9.39e-07 1.28e-06 6.02e-07 1.9e-07 2.19e-07 3.82e-07 5.36e-07 4.67e-07 6.08e-07 2.29e-07 1.51e-07 1.04e-07 2.92e-07 1.49e-06 9.48e-08 6.51e-08 1.72e-07 8.83e-08 1.86e-07 3.73e-08 1.23e-07
ENSG00000186056 \N 166165 4.7e-06 5.13e-06 6.35e-07 3.47e-06 1.62e-06 1.52e-06 5.6e-06 1.18e-06 4.86e-06 2.8e-06 6.72e-06 3.18e-06 7.66e-06 2.02e-06 1.33e-06 4.06e-06 1.94e-06 3.97e-06 1.49e-06 1.51e-06 2.77e-06 4.83e-06 4.43e-06 1.49e-06 8.44e-06 2.05e-06 2.23e-06 1.73e-06 4.42e-06 5.03e-06 2.57e-06 5.03e-07 7.66e-07 1.44e-06 1.9e-06 1.29e-06 1.11e-06 6.03e-07 8.26e-07 5.77e-07 7.36e-07 7e-06 6.52e-07 1.51e-07 6.09e-07 1.03e-06 1.14e-06 6.95e-07 6.17e-07