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Genes within 1Mb (chr1:30881317:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -415471 sc-eQTL 6.55e-01 0.0367 0.0821 0.594 B L1
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 8.26e-01 0.0145 0.0658 0.594 B L1
ENSG00000134644 PUM1 -184674 sc-eQTL 4.14e-01 -0.0451 0.0551 0.594 B L1
ENSG00000162510 MATN1 157732 sc-eQTL 5.62e-01 0.0337 0.058 0.594 B L1
ENSG00000162511 LAPTM5 123543 sc-eQTL 2.65e-01 -0.0507 0.0453 0.594 B L1
ENSG00000162517 PEF1 -763579 sc-eQTL 7.88e-01 -0.0184 0.0686 0.594 B L1
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 6.56e-01 -0.0238 0.0532 0.594 B L1
ENSG00000287510 AL137857.1 149624 sc-eQTL 8.86e-02 0.107 0.0626 0.594 B L1
ENSG00000060688 SNRNP40 -415471 sc-eQTL 1.59e-01 -0.101 0.0716 0.594 CD4T L1
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 7.19e-01 -0.0202 0.0562 0.594 CD4T L1
ENSG00000134644 PUM1 -184674 sc-eQTL 9.18e-01 -0.00518 0.05 0.594 CD4T L1
ENSG00000162511 LAPTM5 123543 sc-eQTL 7.50e-01 0.0177 0.0554 0.594 CD4T L1
ENSG00000162517 PEF1 -763579 sc-eQTL 6.99e-01 -0.0224 0.0579 0.594 CD4T L1
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 7.37e-01 -0.0167 0.0496 0.594 CD4T L1
ENSG00000287510 AL137857.1 149624 sc-eQTL 2.75e-01 0.0648 0.0592 0.594 CD4T L1
ENSG00000060688 SNRNP40 -415471 sc-eQTL 9.53e-01 -0.00556 0.094 0.594 CD8T L1
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 2.80e-01 0.0675 0.0624 0.594 CD8T L1
ENSG00000134644 PUM1 -184674 sc-eQTL 6.81e-02 -0.1 0.0546 0.594 CD8T L1
ENSG00000162511 LAPTM5 123543 sc-eQTL 2.93e-01 0.0563 0.0533 0.594 CD8T L1
ENSG00000162517 PEF1 -763579 sc-eQTL 5.96e-01 -0.035 0.0658 0.594 CD8T L1
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 9.59e-02 0.104 0.0623 0.594 CD8T L1
ENSG00000287510 AL137857.1 149624 sc-eQTL 5.14e-01 0.0514 0.0787 0.594 CD8T L1
ENSG00000060688 SNRNP40 -415471 sc-eQTL 4.63e-01 -0.0606 0.0825 0.592 DC L1
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 5.86e-02 -0.184 0.0969 0.592 DC L1
ENSG00000134644 PUM1 -184674 sc-eQTL 3.95e-01 -0.0652 0.0765 0.592 DC L1
ENSG00000162511 LAPTM5 123543 sc-eQTL 4.70e-02 0.108 0.0542 0.592 DC L1
ENSG00000162517 PEF1 -763579 sc-eQTL 5.32e-01 -0.0555 0.0886 0.592 DC L1
ENSG00000168528 SERINC2 -528248 sc-eQTL 6.04e-02 0.169 0.0894 0.592 DC L1
ENSG00000284543 LINC01226 -624909 sc-eQTL 6.48e-01 0.0273 0.0597 0.592 DC L1
ENSG00000287510 AL137857.1 149624 sc-eQTL 4.18e-01 0.0701 0.0864 0.592 DC L1
ENSG00000060688 SNRNP40 -415471 sc-eQTL 6.99e-01 0.0248 0.0641 0.594 Mono L1
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 9.44e-01 0.00562 0.0795 0.594 Mono L1
ENSG00000134644 PUM1 -184674 sc-eQTL 2.85e-01 0.0545 0.0508 0.594 Mono L1
ENSG00000162511 LAPTM5 123543 sc-eQTL 7.81e-01 0.013 0.0469 0.594 Mono L1
ENSG00000162512 SDC3 -27441 sc-eQTL 6.96e-02 -0.163 0.0894 0.594 Mono L1
ENSG00000162517 PEF1 -763579 sc-eQTL 3.21e-01 -0.0627 0.063 0.594 Mono L1
ENSG00000168528 SERINC2 -528248 sc-eQTL 1.28e-01 0.147 0.0961 0.594 Mono L1
ENSG00000284543 LINC01226 -624909 sc-eQTL 9.44e-01 -0.00604 0.0851 0.594 Mono L1
ENSG00000287510 AL137857.1 149624 sc-eQTL 9.61e-01 0.00361 0.0744 0.594 Mono L1
ENSG00000060688 SNRNP40 -415471 sc-eQTL 5.10e-01 0.0591 0.0896 0.594 NK L1
ENSG00000121753 ADGRB2 -883576 sc-eQTL 8.27e-01 -0.0169 0.0772 0.594 NK L1
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 2.17e-02 -0.14 0.0606 0.594 NK L1
ENSG00000134644 PUM1 -184674 sc-eQTL 7.01e-01 -0.0248 0.0644 0.594 NK L1
ENSG00000162511 LAPTM5 123543 sc-eQTL 2.20e-01 0.091 0.0739 0.594 NK L1
ENSG00000162517 PEF1 -763579 sc-eQTL 2.67e-01 0.0601 0.054 0.594 NK L1
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 3.72e-01 0.0744 0.0832 0.594 NK L1
ENSG00000287510 AL137857.1 149624 sc-eQTL 8.60e-03 0.201 0.0757 0.594 NK L1
ENSG00000060688 SNRNP40 -415471 sc-eQTL 8.81e-01 -0.0102 0.0677 0.594 Other_T L1
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 5.10e-02 -0.141 0.0717 0.594 Other_T L1
ENSG00000134644 PUM1 -184674 sc-eQTL 4.12e-01 0.0535 0.065 0.594 Other_T L1
ENSG00000162511 LAPTM5 123543 sc-eQTL 8.28e-01 -0.0116 0.0533 0.594 Other_T L1
ENSG00000162517 PEF1 -763579 sc-eQTL 5.56e-01 0.042 0.0712 0.594 Other_T L1
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 7.24e-01 -0.0309 0.0873 0.594 Other_T L1
ENSG00000287510 AL137857.1 149624 sc-eQTL 9.97e-01 0.000305 0.091 0.594 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -415471 sc-eQTL 9.80e-01 -0.0027 0.109 0.579 B_Activated L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 6.92e-01 -0.0437 0.11 0.579 B_Activated L2
ENSG00000134644 PUM1 -184674 sc-eQTL 1.56e-01 -0.145 0.102 0.579 B_Activated L2
ENSG00000162510 MATN1 157732 sc-eQTL 5.98e-01 -0.0473 0.0895 0.579 B_Activated L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 6.24e-01 0.0306 0.0624 0.579 B_Activated L2
ENSG00000162517 PEF1 -763579 sc-eQTL 6.82e-01 -0.0437 0.106 0.579 B_Activated L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 3.75e-01 -0.0895 0.101 0.579 B_Activated L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 6.55e-01 -0.0399 0.0892 0.579 B_Activated L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 7.36e-01 0.0341 0.101 0.594 B_Intermediate L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 1.89e-01 -0.11 0.0838 0.594 B_Intermediate L2
ENSG00000134644 PUM1 -184674 sc-eQTL 6.30e-01 -0.0383 0.0793 0.594 B_Intermediate L2
ENSG00000162510 MATN1 157732 sc-eQTL 2.97e-01 -0.0862 0.0824 0.594 B_Intermediate L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 1.82e-01 -0.0677 0.0505 0.594 B_Intermediate L2
ENSG00000162517 PEF1 -763579 sc-eQTL 6.33e-01 -0.045 0.0941 0.594 B_Intermediate L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 8.73e-01 -0.0113 0.0712 0.594 B_Intermediate L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 1.91e-01 0.104 0.0793 0.594 B_Intermediate L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 1.45e-01 -0.143 0.0979 0.593 B_Memory L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 5.60e-01 0.0528 0.0906 0.593 B_Memory L2
ENSG00000134644 PUM1 -184674 sc-eQTL 5.27e-01 -0.0499 0.0788 0.593 B_Memory L2
ENSG00000162510 MATN1 157732 sc-eQTL 6.14e-01 0.0381 0.0754 0.593 B_Memory L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 4.51e-02 -0.134 0.0663 0.593 B_Memory L2
ENSG00000162517 PEF1 -763579 sc-eQTL 7.53e-01 0.0281 0.0893 0.593 B_Memory L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 9.72e-01 -0.00267 0.0765 0.593 B_Memory L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 9.02e-02 0.152 0.089 0.593 B_Memory L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 2.61e-01 0.101 0.0897 0.594 B_Naive1 L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 9.86e-01 -0.00135 0.0777 0.594 B_Naive1 L2
ENSG00000134644 PUM1 -184674 sc-eQTL 6.23e-01 -0.0338 0.0685 0.594 B_Naive1 L2
ENSG00000162510 MATN1 157732 sc-eQTL 1.62e-01 0.0971 0.0692 0.594 B_Naive1 L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 5.14e-01 -0.0303 0.0464 0.594 B_Naive1 L2
ENSG00000162517 PEF1 -763579 sc-eQTL 5.57e-01 0.0482 0.0818 0.594 B_Naive1 L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 6.78e-01 -0.0254 0.061 0.594 B_Naive1 L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 2.16e-01 0.0932 0.0751 0.594 B_Naive1 L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 5.30e-01 -0.06 0.0953 0.594 B_Naive2 L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 1.38e-01 0.117 0.0784 0.594 B_Naive2 L2
ENSG00000134644 PUM1 -184674 sc-eQTL 6.73e-01 -0.0325 0.0771 0.594 B_Naive2 L2
ENSG00000162510 MATN1 157732 sc-eQTL 1.65e-01 0.103 0.0737 0.594 B_Naive2 L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 3.01e-01 -0.052 0.0501 0.594 B_Naive2 L2
ENSG00000162517 PEF1 -763579 sc-eQTL 5.61e-01 -0.0532 0.0914 0.594 B_Naive2 L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 7.29e-01 0.0253 0.0732 0.594 B_Naive2 L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 3.04e-01 0.0813 0.0788 0.594 B_Naive2 L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 8.61e-01 0.0168 0.0958 0.591 CD4_CTL L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 4.18e-01 -0.0764 0.094 0.591 CD4_CTL L2
ENSG00000134644 PUM1 -184674 sc-eQTL 9.09e-01 0.0106 0.0924 0.591 CD4_CTL L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 8.16e-01 -0.0192 0.0823 0.591 CD4_CTL L2
ENSG00000162517 PEF1 -763579 sc-eQTL 1.02e-01 -0.138 0.0839 0.591 CD4_CTL L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 1.32e-01 -0.136 0.0896 0.591 CD4_CTL L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 6.36e-01 0.0377 0.0794 0.591 CD4_CTL L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 5.34e-02 -0.144 0.074 0.594 CD4_Naive L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 7.13e-01 0.0243 0.0662 0.594 CD4_Naive L2
ENSG00000134644 PUM1 -184674 sc-eQTL 6.15e-01 -0.0266 0.0528 0.594 CD4_Naive L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 4.56e-01 0.0422 0.0566 0.594 CD4_Naive L2
ENSG00000162517 PEF1 -763579 sc-eQTL 6.22e-01 -0.0307 0.0621 0.594 CD4_Naive L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 9.47e-01 0.00384 0.0575 0.594 CD4_Naive L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 7.45e-01 0.0215 0.066 0.594 CD4_Naive L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 7.94e-01 -0.025 0.0956 0.594 CD4_TCM L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 5.10e-01 -0.0509 0.077 0.594 CD4_TCM L2
ENSG00000134644 PUM1 -184674 sc-eQTL 1.93e-01 0.0887 0.068 0.594 CD4_TCM L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 6.72e-01 -0.024 0.0566 0.594 CD4_TCM L2
ENSG00000162517 PEF1 -763579 sc-eQTL 2.81e-01 0.0817 0.0757 0.594 CD4_TCM L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 7.04e-01 -0.0273 0.0718 0.594 CD4_TCM L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 3.47e-01 0.0753 0.0798 0.594 CD4_TCM L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 4.60e-01 0.07 0.0946 0.594 CD4_TEM L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 3.19e-01 -0.0899 0.09 0.594 CD4_TEM L2
ENSG00000134644 PUM1 -184674 sc-eQTL 7.10e-01 0.028 0.0751 0.594 CD4_TEM L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 1.84e-01 0.101 0.0757 0.594 CD4_TEM L2
ENSG00000162517 PEF1 -763579 sc-eQTL 1.27e-01 -0.13 0.0847 0.594 CD4_TEM L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 4.79e-01 0.063 0.0888 0.594 CD4_TEM L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 3.31e-01 0.0852 0.0874 0.594 CD4_TEM L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 5.69e-01 0.058 0.102 0.594 CD8_CTL L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 1.28e-01 0.119 0.0776 0.594 CD8_CTL L2
ENSG00000134644 PUM1 -184674 sc-eQTL 2.64e-01 -0.0846 0.0755 0.594 CD8_CTL L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 6.10e-01 0.0429 0.0839 0.594 CD8_CTL L2
ENSG00000162517 PEF1 -763579 sc-eQTL 5.56e-01 -0.043 0.073 0.594 CD8_CTL L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 4.89e-01 0.061 0.0881 0.594 CD8_CTL L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 5.17e-01 0.0538 0.0829 0.594 CD8_CTL L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 8.40e-01 -0.019 0.0943 0.594 CD8_Naive L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 8.68e-01 -0.0135 0.0813 0.594 CD8_Naive L2
ENSG00000134644 PUM1 -184674 sc-eQTL 1.82e-01 -0.0872 0.0652 0.594 CD8_Naive L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 8.99e-01 0.00798 0.0627 0.594 CD8_Naive L2
ENSG00000162517 PEF1 -763579 sc-eQTL 6.61e-01 0.0382 0.0871 0.594 CD8_Naive L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 3.02e-01 0.0808 0.0781 0.594 CD8_Naive L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 7.27e-01 0.0298 0.0852 0.594 CD8_Naive L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 4.39e-01 -0.0813 0.105 0.6 CD8_TCM L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 3.93e-01 0.0822 0.0961 0.6 CD8_TCM L2
ENSG00000134644 PUM1 -184674 sc-eQTL 5.42e-01 0.0552 0.0904 0.6 CD8_TCM L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 1.40e-01 0.14 0.0942 0.6 CD8_TCM L2
ENSG00000162517 PEF1 -763579 sc-eQTL 1.89e-01 -0.127 0.0964 0.6 CD8_TCM L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 3.91e-01 0.0752 0.0875 0.6 CD8_TCM L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 8.82e-01 0.0132 0.0886 0.6 CD8_TCM L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 1.81e-01 -0.131 0.0976 0.591 CD8_TEM L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 2.99e-01 -0.0977 0.0938 0.591 CD8_TEM L2
ENSG00000134644 PUM1 -184674 sc-eQTL 9.87e-01 0.00162 0.0961 0.591 CD8_TEM L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 6.12e-01 -0.0458 0.0903 0.591 CD8_TEM L2
ENSG00000162517 PEF1 -763579 sc-eQTL 7.62e-01 -0.0258 0.0851 0.591 CD8_TEM L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 4.37e-01 0.0729 0.0936 0.591 CD8_TEM L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 7.34e-01 -0.0288 0.0849 0.591 CD8_TEM L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 5.63e-01 -0.0576 0.0994 0.593 MAIT L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 6.54e-01 -0.0395 0.0881 0.593 MAIT L2
ENSG00000134644 PUM1 -184674 sc-eQTL 9.94e-01 0.00059 0.0845 0.593 MAIT L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 7.29e-01 0.0277 0.0797 0.593 MAIT L2
ENSG00000162517 PEF1 -763579 sc-eQTL 7.62e-01 -0.0266 0.0876 0.593 MAIT L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 1.91e-01 0.116 0.0884 0.593 MAIT L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 6.39e-01 -0.0429 0.0914 0.593 MAIT L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 8.82e-01 0.0153 0.103 0.587 NK_CD56bright L2
ENSG00000121753 ADGRB2 -883576 sc-eQTL 3.00e-01 -0.0836 0.0805 0.587 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 2.36e-02 -0.196 0.086 0.587 NK_CD56bright L2
ENSG00000134644 PUM1 -184674 sc-eQTL 3.05e-02 0.197 0.0904 0.587 NK_CD56bright L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 7.80e-01 0.0252 0.0902 0.587 NK_CD56bright L2
ENSG00000162517 PEF1 -763579 sc-eQTL 6.15e-01 0.0442 0.0875 0.587 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 9.10e-01 -0.0103 0.0906 0.587 NK_CD56bright L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 3.95e-01 -0.076 0.0891 0.587 NK_CD56bright L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 5.18e-01 -0.0614 0.0947 0.595 NK_CD56dim L2
ENSG00000121753 ADGRB2 -883576 sc-eQTL 9.94e-01 0.000583 0.0834 0.595 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 2.52e-01 -0.0802 0.0698 0.595 NK_CD56dim L2
ENSG00000134644 PUM1 -184674 sc-eQTL 5.66e-01 -0.0413 0.0718 0.595 NK_CD56dim L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 3.32e-01 0.0743 0.0765 0.595 NK_CD56dim L2
ENSG00000162517 PEF1 -763579 sc-eQTL 1.66e-01 0.0945 0.0679 0.595 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 7.37e-01 0.0323 0.096 0.595 NK_CD56dim L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 1.49e-02 0.192 0.0781 0.595 NK_CD56dim L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 8.03e-01 -0.0252 0.101 0.582 NK_HLA L2
ENSG00000121753 ADGRB2 -883576 sc-eQTL 5.23e-01 0.0511 0.0798 0.582 NK_HLA L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 1.46e-01 -0.13 0.0894 0.582 NK_HLA L2
ENSG00000134644 PUM1 -184674 sc-eQTL 7.13e-01 -0.0322 0.0875 0.582 NK_HLA L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 8.29e-01 0.0181 0.0836 0.582 NK_HLA L2
ENSG00000162517 PEF1 -763579 sc-eQTL 9.28e-02 -0.158 0.0935 0.582 NK_HLA L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 6.01e-01 0.0465 0.0888 0.582 NK_HLA L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 1.15e-03 0.276 0.0837 0.582 NK_HLA L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 7.47e-02 0.165 0.0921 0.595 NK_cytokine L2
ENSG00000121753 ADGRB2 -883576 sc-eQTL 6.01e-01 -0.0439 0.0838 0.595 NK_cytokine L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 2.69e-01 -0.08 0.0722 0.595 NK_cytokine L2
ENSG00000134644 PUM1 -184674 sc-eQTL 1.24e-01 -0.12 0.0779 0.595 NK_cytokine L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 6.44e-01 0.0399 0.0862 0.595 NK_cytokine L2
ENSG00000162517 PEF1 -763579 sc-eQTL 7.02e-01 -0.0282 0.0735 0.595 NK_cytokine L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 6.04e-01 0.0474 0.0913 0.595 NK_cytokine L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 4.55e-02 0.169 0.0842 0.595 NK_cytokine L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 2.19e-01 0.137 0.11 0.593 PB L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 2.96e-01 -0.135 0.128 0.593 PB L2
ENSG00000134644 PUM1 -184674 sc-eQTL 9.32e-01 0.00957 0.112 0.593 PB L2
ENSG00000162510 MATN1 157732 sc-eQTL 9.09e-01 -0.012 0.104 0.593 PB L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 7.23e-01 0.0265 0.0745 0.593 PB L2
ENSG00000162517 PEF1 -763579 sc-eQTL 3.98e-01 0.097 0.114 0.593 PB L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 8.04e-01 -0.0254 0.102 0.593 PB L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 7.21e-01 -0.0389 0.109 0.593 PB L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 7.83e-01 0.0201 0.073 0.591 Pro_T L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 2.34e-02 -0.209 0.0916 0.591 Pro_T L2
ENSG00000134644 PUM1 -184674 sc-eQTL 1.21e-01 0.134 0.086 0.591 Pro_T L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 5.57e-01 -0.0365 0.062 0.591 Pro_T L2
ENSG00000162517 PEF1 -763579 sc-eQTL 1.39e-01 -0.135 0.0906 0.591 Pro_T L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 3.93e-03 -0.248 0.085 0.591 Pro_T L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 7.58e-01 0.0246 0.0797 0.591 Pro_T L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 4.07e-01 0.0812 0.0976 0.594 Treg L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 5.23e-01 -0.0605 0.0945 0.594 Treg L2
ENSG00000134644 PUM1 -184674 sc-eQTL 7.57e-01 -0.0234 0.0757 0.594 Treg L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 8.49e-01 0.0166 0.0867 0.594 Treg L2
ENSG00000162517 PEF1 -763579 sc-eQTL 9.37e-01 0.00736 0.0937 0.594 Treg L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 6.20e-01 0.0438 0.0883 0.594 Treg L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 8.79e-01 -0.0134 0.0882 0.594 Treg L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 5.15e-01 -0.065 0.0997 0.6 cDC L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 7.47e-01 -0.0349 0.108 0.6 cDC L2
ENSG00000134644 PUM1 -184674 sc-eQTL 8.27e-01 -0.0203 0.0928 0.6 cDC L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 3.14e-01 0.0655 0.0649 0.6 cDC L2
ENSG00000162517 PEF1 -763579 sc-eQTL 7.99e-01 -0.024 0.0942 0.6 cDC L2
ENSG00000168528 SERINC2 -528248 sc-eQTL 2.64e-01 0.0933 0.0832 0.6 cDC L2
ENSG00000284543 LINC01226 -624909 sc-eQTL 1.72e-01 -0.112 0.0816 0.6 cDC L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 7.91e-02 0.155 0.0876 0.6 cDC L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 2.64e-01 0.0863 0.0771 0.594 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 6.23e-01 -0.0425 0.0862 0.594 cMono_IL1B L2
ENSG00000134644 PUM1 -184674 sc-eQTL 1.46e-01 0.0848 0.0581 0.594 cMono_IL1B L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 4.64e-01 0.0376 0.0512 0.594 cMono_IL1B L2
ENSG00000162512 SDC3 -27441 sc-eQTL 3.45e-01 -0.0913 0.0963 0.594 cMono_IL1B L2
ENSG00000162517 PEF1 -763579 sc-eQTL 5.50e-01 -0.0472 0.0788 0.594 cMono_IL1B L2
ENSG00000168528 SERINC2 -528248 sc-eQTL 8.72e-02 0.167 0.097 0.594 cMono_IL1B L2
ENSG00000284543 LINC01226 -624909 sc-eQTL 8.57e-01 -0.0156 0.0864 0.594 cMono_IL1B L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 1.40e-02 0.197 0.0794 0.594 cMono_IL1B L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 8.39e-01 -0.0165 0.0815 0.594 cMono_S100A L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 7.74e-01 0.0276 0.0962 0.594 cMono_S100A L2
ENSG00000134644 PUM1 -184674 sc-eQTL 1.00e-01 0.114 0.0691 0.594 cMono_S100A L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 9.34e-01 -0.00441 0.0535 0.594 cMono_S100A L2
ENSG00000162512 SDC3 -27441 sc-eQTL 6.79e-01 -0.0383 0.0923 0.594 cMono_S100A L2
ENSG00000162517 PEF1 -763579 sc-eQTL 2.81e-01 -0.0899 0.0832 0.594 cMono_S100A L2
ENSG00000168528 SERINC2 -528248 sc-eQTL 2.25e-01 0.118 0.0975 0.594 cMono_S100A L2
ENSG00000284543 LINC01226 -624909 sc-eQTL 9.24e-01 0.00756 0.0794 0.594 cMono_S100A L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 5.60e-01 -0.0465 0.0797 0.594 cMono_S100A L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 8.60e-01 -0.0215 0.122 0.603 gdT L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 3.65e-01 -0.0948 0.104 0.603 gdT L2
ENSG00000134644 PUM1 -184674 sc-eQTL 9.77e-01 0.00311 0.108 0.603 gdT L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 8.60e-01 -0.0208 0.117 0.603 gdT L2
ENSG00000162517 PEF1 -763579 sc-eQTL 6.50e-02 0.197 0.106 0.603 gdT L2
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 6.34e-01 -0.0515 0.108 0.603 gdT L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 3.02e-01 0.108 0.104 0.603 gdT L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 8.42e-01 0.0183 0.0922 0.602 intMono L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 1.32e-01 0.149 0.0985 0.602 intMono L2
ENSG00000134644 PUM1 -184674 sc-eQTL 2.04e-01 -0.107 0.0837 0.602 intMono L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 1.80e-01 0.0883 0.0657 0.602 intMono L2
ENSG00000162512 SDC3 -27441 sc-eQTL 3.61e-01 -0.0826 0.0901 0.602 intMono L2
ENSG00000162517 PEF1 -763579 sc-eQTL 9.99e-02 0.156 0.0943 0.602 intMono L2
ENSG00000168528 SERINC2 -528248 sc-eQTL 1.34e-01 0.141 0.094 0.602 intMono L2
ENSG00000284543 LINC01226 -624909 sc-eQTL 9.03e-01 0.011 0.0896 0.602 intMono L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 2.69e-01 0.099 0.0894 0.602 intMono L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 8.69e-01 0.014 0.0847 0.593 ncMono L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 7.26e-01 -0.0317 0.0903 0.593 ncMono L2
ENSG00000134644 PUM1 -184674 sc-eQTL 5.06e-01 -0.0491 0.0737 0.593 ncMono L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 2.46e-01 0.0778 0.0668 0.593 ncMono L2
ENSG00000162512 SDC3 -27441 sc-eQTL 8.14e-02 -0.131 0.0746 0.593 ncMono L2
ENSG00000162517 PEF1 -763579 sc-eQTL 7.22e-01 -0.0307 0.0862 0.593 ncMono L2
ENSG00000168528 SERINC2 -528248 sc-eQTL 1.81e-01 0.11 0.0817 0.593 ncMono L2
ENSG00000284543 LINC01226 -624909 sc-eQTL 4.46e-02 0.164 0.0811 0.593 ncMono L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 2.19e-01 -0.104 0.0846 0.593 ncMono L2
ENSG00000060688 SNRNP40 -415471 sc-eQTL 4.05e-01 -0.0827 0.0991 0.576 pDC L2
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 3.44e-01 -0.103 0.109 0.576 pDC L2
ENSG00000134644 PUM1 -184674 sc-eQTL 6.81e-01 0.0372 0.0903 0.576 pDC L2
ENSG00000162511 LAPTM5 123543 sc-eQTL 4.31e-01 0.0662 0.0838 0.576 pDC L2
ENSG00000162517 PEF1 -763579 sc-eQTL 3.20e-01 -0.108 0.109 0.576 pDC L2
ENSG00000168528 SERINC2 -528248 sc-eQTL 1.90e-01 0.133 0.101 0.576 pDC L2
ENSG00000284543 LINC01226 -624909 sc-eQTL 9.89e-01 0.00113 0.0791 0.576 pDC L2
ENSG00000287510 AL137857.1 149624 sc-eQTL 5.19e-01 0.06 0.0929 0.576 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -415471 sc-eQTL 4.47e-01 -0.0736 0.0966 0.594 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 6.36e-01 -0.0381 0.0804 0.594 B_Memory LOneK1K
ENSG00000134644 PUM1 -184674 sc-eQTL 2.49e-01 -0.0821 0.0711 0.594 B_Memory LOneK1K
ENSG00000162510 MATN1 157732 sc-eQTL 1.81e-01 -0.109 0.081 0.594 B_Memory LOneK1K
ENSG00000162511 LAPTM5 123543 sc-eQTL 8.82e-02 -0.0869 0.0507 0.594 B_Memory LOneK1K
ENSG00000162517 PEF1 -763579 sc-eQTL 7.27e-01 -0.0296 0.0846 0.594 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 9.30e-01 -0.00597 0.0676 0.594 B_Memory LOneK1K
ENSG00000287510 AL137857.1 149624 sc-eQTL 7.74e-02 0.13 0.0731 0.594 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -415471 sc-eQTL 6.77e-01 0.0364 0.0872 0.594 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 3.54e-01 0.064 0.0688 0.594 B_Naive LOneK1K
ENSG00000134644 PUM1 -184674 sc-eQTL 5.29e-01 -0.0411 0.0652 0.594 B_Naive LOneK1K
ENSG00000162510 MATN1 157732 sc-eQTL 1.94e-01 0.0816 0.0626 0.594 B_Naive LOneK1K
ENSG00000162511 LAPTM5 123543 sc-eQTL 7.72e-01 -0.0128 0.0442 0.594 B_Naive LOneK1K
ENSG00000162517 PEF1 -763579 sc-eQTL 9.26e-01 0.00752 0.0807 0.594 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 4.49e-01 -0.0432 0.057 0.594 B_Naive LOneK1K
ENSG00000287510 AL137857.1 149624 sc-eQTL 1.42e-01 0.0995 0.0675 0.594 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -415471 sc-eQTL 3.93e-01 0.0628 0.0734 0.594 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 9.32e-01 -0.00708 0.0833 0.594 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -184674 sc-eQTL 6.98e-02 0.096 0.0527 0.594 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 123543 sc-eQTL 6.42e-01 0.0218 0.0467 0.594 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -27441 sc-eQTL 2.51e-01 -0.109 0.0949 0.594 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -763579 sc-eQTL 1.76e-01 -0.0904 0.0667 0.594 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -528248 sc-eQTL 1.30e-01 0.148 0.0974 0.594 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -624909 sc-eQTL 9.77e-01 -0.00231 0.0803 0.594 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 149624 sc-eQTL 2.10e-01 0.0942 0.0749 0.594 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -415471 sc-eQTL 9.50e-01 0.00502 0.0802 0.595 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 3.25e-01 0.0864 0.0875 0.595 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -184674 sc-eQTL 1.25e-01 -0.11 0.0715 0.595 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 123543 sc-eQTL 4.65e-01 0.0421 0.0574 0.595 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -27441 sc-eQTL 3.60e-02 -0.175 0.0831 0.595 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -763579 sc-eQTL 7.14e-01 0.028 0.0763 0.595 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -528248 sc-eQTL 3.52e-01 0.0811 0.0869 0.595 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -624909 sc-eQTL 1.00e-01 0.136 0.0821 0.595 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 149624 sc-eQTL 3.22e-01 -0.0819 0.0826 0.595 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -415471 sc-eQTL 5.81e-01 0.0498 0.0902 0.595 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -883576 sc-eQTL 8.87e-01 -0.011 0.0768 0.595 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -415665 sc-eQTL 8.03e-02 -0.108 0.0612 0.595 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -184674 sc-eQTL 3.14e-01 -0.068 0.0674 0.595 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 123543 sc-eQTL 3.24e-01 0.0744 0.0753 0.595 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -763579 sc-eQTL 4.98e-01 0.0389 0.0573 0.595 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 162813 sc-eQTL 2.92e-01 0.0918 0.0868 0.595 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 149624 sc-eQTL 2.67e-03 0.223 0.0735 0.595 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 \N -415665 3.07e-07 2.4e-07 5.64e-08 2.25e-07 9.25e-08 8.45e-08 1.99e-07 5.43e-08 1.5e-07 6.08e-08 1.69e-07 1.37e-07 1.71e-07 7.95e-08 5.82e-08 7.97e-08 4.24e-08 1.44e-07 6.32e-08 5.07e-08 1.25e-07 1.42e-07 1.62e-07 2.83e-08 1.98e-07 1.21e-07 1.12e-07 1.12e-07 1.31e-07 9.88e-08 1.09e-07 3.6e-08 4.37e-08 8.7e-08 3.71e-08 3.04e-08 5.1e-08 8.93e-08 6.59e-08 7.92e-08 5.39e-08 1.52e-07 3.19e-08 1.1e-08 3.07e-08 1.71e-08 1.11e-07 2e-09 4.85e-08
ENSG00000186056 \N 162813 2.02e-06 3.18e-06 2.75e-07 1.71e-06 3.82e-07 7.28e-07 1.48e-06 4.23e-07 1.68e-06 7.54e-07 2.11e-06 1.34e-06 2.69e-06 8.7e-07 3.41e-07 1.23e-06 1.12e-06 1.3e-06 5.9e-07 7.68e-07 6.02e-07 2.25e-06 1.71e-06 8.52e-07 3.15e-06 7.75e-07 1.19e-06 1.04e-06 1.71e-06 1.67e-06 1.19e-06 2.66e-07 3.45e-07 5.72e-07 9.16e-07 5.42e-07 6.87e-07 3.63e-07 4.73e-07 3.79e-07 1.51e-07 2.51e-06 4.79e-07 1.6e-07 3.48e-07 2.95e-07 3.8e-07 2.6e-07 2.3e-07