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Genes within 1Mb (chr1:30880562:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -416226 sc-eQTL 4.65e-01 0.0599 0.0818 0.635 B L1
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 4.14e-01 0.0536 0.0655 0.635 B L1
ENSG00000134644 PUM1 -185429 sc-eQTL 1.35e-01 -0.0821 0.0547 0.635 B L1
ENSG00000162510 MATN1 156977 sc-eQTL 8.06e-01 0.0142 0.0579 0.635 B L1
ENSG00000162511 LAPTM5 122788 sc-eQTL 3.38e-01 -0.0434 0.0452 0.635 B L1
ENSG00000162517 PEF1 -764334 sc-eQTL 6.78e-01 -0.0284 0.0684 0.635 B L1
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 9.66e-01 -0.00228 0.0531 0.635 B L1
ENSG00000287510 AL137857.1 148869 sc-eQTL 1.25e-01 0.0962 0.0625 0.635 B L1
ENSG00000060688 SNRNP40 -416226 sc-eQTL 7.54e-01 -0.0226 0.0722 0.635 CD4T L1
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 5.35e-01 0.035 0.0563 0.635 CD4T L1
ENSG00000134644 PUM1 -185429 sc-eQTL 6.10e-01 -0.0256 0.0502 0.635 CD4T L1
ENSG00000162511 LAPTM5 122788 sc-eQTL 7.29e-01 0.0193 0.0556 0.635 CD4T L1
ENSG00000162517 PEF1 -764334 sc-eQTL 4.07e-01 -0.0483 0.0581 0.635 CD4T L1
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 9.08e-01 -0.00574 0.0498 0.635 CD4T L1
ENSG00000287510 AL137857.1 148869 sc-eQTL 4.07e-01 0.0494 0.0595 0.635 CD4T L1
ENSG00000060688 SNRNP40 -416226 sc-eQTL 8.73e-01 0.0151 0.0941 0.635 CD8T L1
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 4.62e-02 0.124 0.062 0.635 CD8T L1
ENSG00000134644 PUM1 -185429 sc-eQTL 2.63e-02 -0.122 0.0545 0.635 CD8T L1
ENSG00000162511 LAPTM5 122788 sc-eQTL 1.51e-01 0.0768 0.0533 0.635 CD8T L1
ENSG00000162517 PEF1 -764334 sc-eQTL 5.66e-01 -0.0379 0.0659 0.635 CD8T L1
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 9.54e-02 0.104 0.0623 0.635 CD8T L1
ENSG00000287510 AL137857.1 148869 sc-eQTL 5.83e-01 0.0433 0.0788 0.635 CD8T L1
ENSG00000060688 SNRNP40 -416226 sc-eQTL 6.94e-01 -0.0326 0.0829 0.633 DC L1
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 1.15e-01 -0.155 0.0976 0.633 DC L1
ENSG00000134644 PUM1 -185429 sc-eQTL 3.79e-01 -0.0677 0.0768 0.633 DC L1
ENSG00000162511 LAPTM5 122788 sc-eQTL 1.81e-02 0.129 0.0542 0.633 DC L1
ENSG00000162517 PEF1 -764334 sc-eQTL 4.87e-01 -0.062 0.089 0.633 DC L1
ENSG00000168528 SERINC2 -529003 sc-eQTL 8.26e-02 0.157 0.0899 0.633 DC L1
ENSG00000284543 LINC01226 -625664 sc-eQTL 2.03e-01 0.0762 0.0598 0.633 DC L1
ENSG00000287510 AL137857.1 148869 sc-eQTL 8.71e-01 0.0141 0.0869 0.633 DC L1
ENSG00000060688 SNRNP40 -416226 sc-eQTL 8.90e-01 -0.00888 0.0642 0.635 Mono L1
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 3.78e-01 0.0701 0.0794 0.635 Mono L1
ENSG00000134644 PUM1 -185429 sc-eQTL 2.94e-01 0.0536 0.0509 0.635 Mono L1
ENSG00000162511 LAPTM5 122788 sc-eQTL 5.97e-01 0.0248 0.0469 0.635 Mono L1
ENSG00000162512 SDC3 -28196 sc-eQTL 2.43e-01 -0.105 0.0899 0.635 Mono L1
ENSG00000162517 PEF1 -764334 sc-eQTL 5.55e-01 -0.0374 0.0632 0.635 Mono L1
ENSG00000168528 SERINC2 -529003 sc-eQTL 2.62e-01 0.109 0.0965 0.635 Mono L1
ENSG00000284543 LINC01226 -625664 sc-eQTL 6.90e-01 -0.0341 0.0852 0.635 Mono L1
ENSG00000287510 AL137857.1 148869 sc-eQTL 9.87e-01 0.00126 0.0745 0.635 Mono L1
ENSG00000060688 SNRNP40 -416226 sc-eQTL 9.48e-01 0.00591 0.0901 0.635 NK L1
ENSG00000121753 ADGRB2 -884331 sc-eQTL 9.68e-01 0.00314 0.0776 0.635 NK L1
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 1.20e-01 -0.0958 0.0613 0.635 NK L1
ENSG00000134644 PUM1 -185429 sc-eQTL 2.99e-01 -0.0671 0.0645 0.635 NK L1
ENSG00000162511 LAPTM5 122788 sc-eQTL 2.97e-01 0.0777 0.0743 0.635 NK L1
ENSG00000162517 PEF1 -764334 sc-eQTL 1.27e-01 0.0828 0.0541 0.635 NK L1
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 6.77e-01 0.0349 0.0837 0.635 NK L1
ENSG00000287510 AL137857.1 148869 sc-eQTL 7.15e-02 0.139 0.0767 0.635 NK L1
ENSG00000060688 SNRNP40 -416226 sc-eQTL 9.89e-01 -0.000901 0.0678 0.635 Other_T L1
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 1.64e-01 -0.101 0.0722 0.635 Other_T L1
ENSG00000134644 PUM1 -185429 sc-eQTL 3.96e-01 0.0553 0.0651 0.635 Other_T L1
ENSG00000162511 LAPTM5 122788 sc-eQTL 9.72e-01 -0.00188 0.0534 0.635 Other_T L1
ENSG00000162517 PEF1 -764334 sc-eQTL 4.86e-01 0.0497 0.0713 0.635 Other_T L1
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 3.86e-01 -0.0759 0.0873 0.635 Other_T L1
ENSG00000287510 AL137857.1 148869 sc-eQTL 7.17e-01 -0.0331 0.0911 0.635 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -416226 sc-eQTL 9.59e-01 -0.00544 0.107 0.628 B_Activated L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 6.83e-01 -0.044 0.108 0.628 B_Activated L2
ENSG00000134644 PUM1 -185429 sc-eQTL 4.63e-02 -0.199 0.099 0.628 B_Activated L2
ENSG00000162510 MATN1 156977 sc-eQTL 9.65e-01 -0.00381 0.0875 0.628 B_Activated L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 6.60e-01 0.0268 0.061 0.628 B_Activated L2
ENSG00000162517 PEF1 -764334 sc-eQTL 3.53e-01 -0.0965 0.104 0.628 B_Activated L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 1.20e-01 -0.153 0.0978 0.628 B_Activated L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 5.89e-01 -0.0471 0.0871 0.628 B_Activated L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 9.89e-01 -0.00143 0.102 0.635 B_Intermediate L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 1.86e-01 -0.112 0.0843 0.635 B_Intermediate L2
ENSG00000134644 PUM1 -185429 sc-eQTL 1.13e-01 -0.126 0.0794 0.635 B_Intermediate L2
ENSG00000162510 MATN1 156977 sc-eQTL 1.43e-01 -0.122 0.0827 0.635 B_Intermediate L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 1.31e-01 -0.077 0.0507 0.635 B_Intermediate L2
ENSG00000162517 PEF1 -764334 sc-eQTL 5.79e-01 -0.0525 0.0947 0.635 B_Intermediate L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 8.83e-01 -0.0105 0.0716 0.635 B_Intermediate L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 8.01e-02 0.14 0.0795 0.635 B_Intermediate L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 1.85e-01 -0.131 0.0984 0.631 B_Memory L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 2.47e-01 0.105 0.0908 0.631 B_Memory L2
ENSG00000134644 PUM1 -185429 sc-eQTL 9.66e-01 0.00342 0.0793 0.631 B_Memory L2
ENSG00000162510 MATN1 156977 sc-eQTL 5.87e-01 0.0412 0.0758 0.631 B_Memory L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 9.32e-02 -0.113 0.0668 0.631 B_Memory L2
ENSG00000162517 PEF1 -764334 sc-eQTL 5.14e-01 0.0586 0.0897 0.631 B_Memory L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 9.27e-01 -0.00702 0.0769 0.631 B_Memory L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 1.24e-01 0.138 0.0896 0.631 B_Memory L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 2.55e-01 0.103 0.0899 0.635 B_Naive1 L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 7.31e-01 0.0268 0.0778 0.635 B_Naive1 L2
ENSG00000134644 PUM1 -185429 sc-eQTL 3.56e-01 -0.0633 0.0685 0.635 B_Naive1 L2
ENSG00000162510 MATN1 156977 sc-eQTL 2.44e-01 0.0811 0.0695 0.635 B_Naive1 L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 5.75e-01 -0.0261 0.0465 0.635 B_Naive1 L2
ENSG00000162517 PEF1 -764334 sc-eQTL 6.54e-01 0.0369 0.082 0.635 B_Naive1 L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 8.72e-01 0.00983 0.0611 0.635 B_Naive1 L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 1.93e-01 0.0983 0.0752 0.635 B_Naive1 L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 7.01e-01 -0.0367 0.0954 0.633 B_Naive2 L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 1.69e-01 0.108 0.0784 0.633 B_Naive2 L2
ENSG00000134644 PUM1 -185429 sc-eQTL 5.62e-01 -0.0447 0.0771 0.633 B_Naive2 L2
ENSG00000162510 MATN1 156977 sc-eQTL 3.34e-01 0.0716 0.0739 0.633 B_Naive2 L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 3.09e-01 -0.0511 0.0502 0.633 B_Naive2 L2
ENSG00000162517 PEF1 -764334 sc-eQTL 6.44e-01 -0.0423 0.0914 0.633 B_Naive2 L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 5.85e-01 0.04 0.0732 0.633 B_Naive2 L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 1.34e-01 0.118 0.0787 0.633 B_Naive2 L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 6.26e-01 0.0473 0.0968 0.63 CD4_CTL L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 5.03e-01 -0.0638 0.0951 0.63 CD4_CTL L2
ENSG00000134644 PUM1 -185429 sc-eQTL 7.06e-01 0.0352 0.0934 0.63 CD4_CTL L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 6.08e-01 0.0427 0.0832 0.63 CD4_CTL L2
ENSG00000162517 PEF1 -764334 sc-eQTL 1.86e-01 -0.113 0.085 0.63 CD4_CTL L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 1.77e-01 -0.123 0.0907 0.63 CD4_CTL L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 5.80e-01 0.0446 0.0803 0.63 CD4_CTL L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 1.37e-01 -0.111 0.0744 0.635 CD4_Naive L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 1.82e-01 0.0885 0.066 0.635 CD4_Naive L2
ENSG00000134644 PUM1 -185429 sc-eQTL 4.57e-01 -0.0394 0.0529 0.635 CD4_Naive L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 5.53e-01 0.0337 0.0567 0.635 CD4_Naive L2
ENSG00000162517 PEF1 -764334 sc-eQTL 6.25e-01 -0.0305 0.0622 0.635 CD4_Naive L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 8.52e-01 0.0107 0.0576 0.635 CD4_Naive L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 3.98e-01 0.0559 0.066 0.635 CD4_Naive L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 3.97e-01 0.0804 0.0949 0.635 CD4_TCM L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 8.23e-01 0.0172 0.0766 0.635 CD4_TCM L2
ENSG00000134644 PUM1 -185429 sc-eQTL 3.31e-01 0.0659 0.0677 0.635 CD4_TCM L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 4.34e-01 -0.0441 0.0562 0.635 CD4_TCM L2
ENSG00000162517 PEF1 -764334 sc-eQTL 5.29e-01 0.0475 0.0753 0.635 CD4_TCM L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 8.63e-01 -0.0123 0.0714 0.635 CD4_TCM L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 3.80e-01 0.0699 0.0794 0.635 CD4_TCM L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 3.60e-01 0.0872 0.0951 0.635 CD4_TEM L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 1.72e-01 -0.124 0.0904 0.635 CD4_TEM L2
ENSG00000134644 PUM1 -185429 sc-eQTL 9.43e-01 -0.00543 0.0756 0.635 CD4_TEM L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 8.22e-02 0.133 0.0759 0.635 CD4_TEM L2
ENSG00000162517 PEF1 -764334 sc-eQTL 1.96e-01 -0.111 0.0854 0.635 CD4_TEM L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 8.21e-01 -0.0203 0.0895 0.635 CD4_TEM L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 4.72e-01 0.0635 0.0881 0.635 CD4_TEM L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 8.01e-01 -0.0256 0.102 0.635 CD8_CTL L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 3.02e-02 0.168 0.0771 0.635 CD8_CTL L2
ENSG00000134644 PUM1 -185429 sc-eQTL 1.85e-01 -0.1 0.0754 0.635 CD8_CTL L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 4.00e-01 0.0705 0.0837 0.635 CD8_CTL L2
ENSG00000162517 PEF1 -764334 sc-eQTL 2.21e-01 -0.0893 0.0727 0.635 CD8_CTL L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 1.55e-01 0.125 0.0877 0.635 CD8_CTL L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 5.85e-01 0.0453 0.0828 0.635 CD8_CTL L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 6.50e-01 0.0429 0.0943 0.635 CD8_Naive L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 8.52e-01 0.0152 0.0814 0.635 CD8_Naive L2
ENSG00000134644 PUM1 -185429 sc-eQTL 7.02e-02 -0.118 0.065 0.635 CD8_Naive L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 9.01e-01 0.00779 0.0627 0.635 CD8_Naive L2
ENSG00000162517 PEF1 -764334 sc-eQTL 4.46e-01 0.0665 0.0871 0.635 CD8_Naive L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 5.08e-01 0.0519 0.0783 0.635 CD8_Naive L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 8.63e-01 0.0148 0.0853 0.635 CD8_Naive L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 5.93e-01 -0.057 0.106 0.639 CD8_TCM L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 1.75e-01 0.132 0.0972 0.639 CD8_TCM L2
ENSG00000134644 PUM1 -185429 sc-eQTL 4.98e-01 0.0622 0.0917 0.639 CD8_TCM L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 6.87e-02 0.174 0.0953 0.639 CD8_TCM L2
ENSG00000162517 PEF1 -764334 sc-eQTL 5.22e-01 -0.0629 0.0981 0.639 CD8_TCM L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 8.23e-01 -0.0199 0.0889 0.639 CD8_TCM L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 3.34e-01 0.0868 0.0897 0.639 CD8_TCM L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 1.05e-01 -0.156 0.0959 0.632 CD8_TEM L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 4.87e-01 -0.0644 0.0925 0.632 CD8_TEM L2
ENSG00000134644 PUM1 -185429 sc-eQTL 5.19e-01 -0.061 0.0946 0.632 CD8_TEM L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 8.49e-01 -0.017 0.089 0.632 CD8_TEM L2
ENSG00000162517 PEF1 -764334 sc-eQTL 3.96e-01 -0.0712 0.0836 0.632 CD8_TEM L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 5.53e-01 0.0548 0.0923 0.632 CD8_TEM L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 8.34e-01 -0.0175 0.0836 0.632 CD8_TEM L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 7.38e-01 -0.0339 0.101 0.632 MAIT L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 9.75e-01 0.00281 0.0897 0.632 MAIT L2
ENSG00000134644 PUM1 -185429 sc-eQTL 7.71e-01 -0.0251 0.086 0.632 MAIT L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 6.55e-01 0.0363 0.0811 0.632 MAIT L2
ENSG00000162517 PEF1 -764334 sc-eQTL 9.95e-01 -0.000509 0.0892 0.632 MAIT L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 3.01e-01 0.0936 0.0902 0.632 MAIT L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 5.33e-01 -0.0582 0.0931 0.632 MAIT L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 9.44e-01 0.00717 0.102 0.629 NK_CD56bright L2
ENSG00000121753 ADGRB2 -884331 sc-eQTL 3.91e-01 -0.0688 0.08 0.629 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 9.91e-02 -0.142 0.0859 0.629 NK_CD56bright L2
ENSG00000134644 PUM1 -185429 sc-eQTL 8.17e-02 0.158 0.0901 0.629 NK_CD56bright L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 9.19e-01 0.00907 0.0896 0.629 NK_CD56bright L2
ENSG00000162517 PEF1 -764334 sc-eQTL 3.79e-01 0.0765 0.0868 0.629 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 6.45e-01 -0.0415 0.09 0.629 NK_CD56bright L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 8.50e-01 -0.0168 0.0887 0.629 NK_CD56bright L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 1.89e-01 -0.125 0.0948 0.636 NK_CD56dim L2
ENSG00000121753 ADGRB2 -884331 sc-eQTL 9.31e-01 0.00727 0.0837 0.636 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 5.38e-01 -0.0434 0.0703 0.636 NK_CD56dim L2
ENSG00000134644 PUM1 -185429 sc-eQTL 3.11e-01 -0.0732 0.072 0.636 NK_CD56dim L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 4.56e-01 0.0574 0.0769 0.636 NK_CD56dim L2
ENSG00000162517 PEF1 -764334 sc-eQTL 1.36e-01 0.102 0.0682 0.636 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 7.22e-01 0.0344 0.0964 0.636 NK_CD56dim L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 5.38e-02 0.153 0.0789 0.636 NK_CD56dim L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 9.48e-01 0.00658 0.1 0.626 NK_HLA L2
ENSG00000121753 ADGRB2 -884331 sc-eQTL 4.96e-01 0.0543 0.0795 0.626 NK_HLA L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 2.60e-01 -0.101 0.0892 0.626 NK_HLA L2
ENSG00000134644 PUM1 -185429 sc-eQTL 4.34e-01 -0.0682 0.0871 0.626 NK_HLA L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 7.75e-01 -0.0238 0.0832 0.626 NK_HLA L2
ENSG00000162517 PEF1 -764334 sc-eQTL 3.65e-01 -0.085 0.0936 0.626 NK_HLA L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 7.36e-01 0.0299 0.0885 0.626 NK_HLA L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 6.64e-03 0.231 0.084 0.626 NK_HLA L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 3.47e-01 0.0873 0.0925 0.636 NK_cytokine L2
ENSG00000121753 ADGRB2 -884331 sc-eQTL 6.51e-01 -0.0379 0.0837 0.636 NK_cytokine L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 3.37e-01 -0.0695 0.0722 0.636 NK_cytokine L2
ENSG00000134644 PUM1 -185429 sc-eQTL 8.04e-02 -0.136 0.0776 0.636 NK_cytokine L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 6.73e-01 0.0364 0.0861 0.636 NK_cytokine L2
ENSG00000162517 PEF1 -764334 sc-eQTL 9.35e-01 0.00596 0.0734 0.636 NK_cytokine L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 9.75e-01 -0.0029 0.0913 0.636 NK_cytokine L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 1.20e-01 0.132 0.0844 0.636 NK_cytokine L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 4.63e-01 0.0772 0.105 0.644 PB L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 6.35e-01 -0.0579 0.122 0.644 PB L2
ENSG00000134644 PUM1 -185429 sc-eQTL 5.67e-01 -0.0607 0.106 0.644 PB L2
ENSG00000162510 MATN1 156977 sc-eQTL 8.93e-01 -0.0133 0.0987 0.644 PB L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 7.62e-01 0.0214 0.0705 0.644 PB L2
ENSG00000162517 PEF1 -764334 sc-eQTL 9.79e-01 0.00283 0.109 0.644 PB L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 6.06e-01 -0.0499 0.0964 0.644 PB L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 6.70e-01 -0.0439 0.103 0.644 PB L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 6.93e-01 0.0286 0.0724 0.633 Pro_T L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 1.31e-01 -0.138 0.0914 0.633 Pro_T L2
ENSG00000134644 PUM1 -185429 sc-eQTL 1.27e-02 0.212 0.0845 0.633 Pro_T L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 3.80e-01 -0.054 0.0614 0.633 Pro_T L2
ENSG00000162517 PEF1 -764334 sc-eQTL 1.03e-01 -0.147 0.0897 0.633 Pro_T L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 2.75e-02 -0.189 0.085 0.633 Pro_T L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 8.76e-01 0.0124 0.0791 0.633 Pro_T L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 5.76e-01 0.0548 0.0979 0.635 Treg L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 4.16e-01 -0.0771 0.0946 0.635 Treg L2
ENSG00000134644 PUM1 -185429 sc-eQTL 5.52e-01 -0.0451 0.0758 0.635 Treg L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 9.74e-01 0.0028 0.0868 0.635 Treg L2
ENSG00000162517 PEF1 -764334 sc-eQTL 6.37e-01 0.0443 0.0938 0.635 Treg L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 4.79e-01 0.0626 0.0884 0.635 Treg L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 9.74e-01 -0.0029 0.0884 0.635 Treg L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 6.94e-01 -0.0403 0.102 0.641 cDC L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 8.36e-01 0.0229 0.111 0.641 cDC L2
ENSG00000134644 PUM1 -185429 sc-eQTL 9.89e-01 -0.00125 0.095 0.641 cDC L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 1.12e-01 0.106 0.0661 0.641 cDC L2
ENSG00000162517 PEF1 -764334 sc-eQTL 5.47e-01 -0.0581 0.0963 0.641 cDC L2
ENSG00000168528 SERINC2 -529003 sc-eQTL 3.32e-01 0.083 0.0852 0.641 cDC L2
ENSG00000284543 LINC01226 -625664 sc-eQTL 6.18e-01 -0.0419 0.0839 0.641 cDC L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 9.68e-02 0.15 0.0897 0.641 cDC L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 4.27e-01 0.0615 0.0772 0.635 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 9.19e-01 -0.00873 0.0863 0.635 cMono_IL1B L2
ENSG00000134644 PUM1 -185429 sc-eQTL 7.72e-02 0.103 0.058 0.635 cMono_IL1B L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 2.88e-01 0.0545 0.0511 0.635 cMono_IL1B L2
ENSG00000162512 SDC3 -28196 sc-eQTL 5.76e-01 -0.054 0.0965 0.635 cMono_IL1B L2
ENSG00000162517 PEF1 -764334 sc-eQTL 6.57e-01 -0.0351 0.0788 0.635 cMono_IL1B L2
ENSG00000168528 SERINC2 -529003 sc-eQTL 2.46e-01 0.113 0.0974 0.635 cMono_IL1B L2
ENSG00000284543 LINC01226 -625664 sc-eQTL 5.81e-01 -0.0477 0.0863 0.635 cMono_IL1B L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 2.68e-02 0.178 0.0796 0.635 cMono_IL1B L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 2.57e-01 -0.092 0.0809 0.635 cMono_S100A L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 2.19e-01 0.118 0.0956 0.635 cMono_S100A L2
ENSG00000134644 PUM1 -185429 sc-eQTL 2.86e-01 0.074 0.0691 0.635 cMono_S100A L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 9.16e-01 0.00559 0.0533 0.635 cMono_S100A L2
ENSG00000162512 SDC3 -28196 sc-eQTL 9.70e-01 -0.00344 0.092 0.635 cMono_S100A L2
ENSG00000162517 PEF1 -764334 sc-eQTL 3.52e-01 -0.0774 0.0829 0.635 cMono_S100A L2
ENSG00000168528 SERINC2 -529003 sc-eQTL 4.34e-01 0.0763 0.0973 0.635 cMono_S100A L2
ENSG00000284543 LINC01226 -625664 sc-eQTL 5.95e-01 -0.0421 0.0791 0.635 cMono_S100A L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 4.67e-01 -0.0578 0.0794 0.635 cMono_S100A L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 2.83e-01 -0.135 0.126 0.648 gdT L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 4.04e-01 -0.0903 0.108 0.648 gdT L2
ENSG00000134644 PUM1 -185429 sc-eQTL 8.23e-01 0.025 0.112 0.648 gdT L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 5.69e-01 -0.0692 0.121 0.648 gdT L2
ENSG00000162517 PEF1 -764334 sc-eQTL 3.13e-02 0.237 0.109 0.648 gdT L2
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 2.55e-01 -0.127 0.111 0.648 gdT L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 4.72e-01 0.0781 0.108 0.648 gdT L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 6.33e-01 -0.0442 0.0926 0.644 intMono L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 1.96e-01 0.129 0.0992 0.644 intMono L2
ENSG00000134644 PUM1 -185429 sc-eQTL 1.11e-01 -0.134 0.084 0.644 intMono L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 1.28e-01 0.101 0.0659 0.644 intMono L2
ENSG00000162512 SDC3 -28196 sc-eQTL 9.91e-01 -0.00103 0.0908 0.644 intMono L2
ENSG00000162517 PEF1 -764334 sc-eQTL 1.40e-01 0.14 0.0949 0.644 intMono L2
ENSG00000168528 SERINC2 -529003 sc-eQTL 2.47e-01 0.11 0.0947 0.644 intMono L2
ENSG00000284543 LINC01226 -625664 sc-eQTL 8.17e-01 -0.0208 0.09 0.644 intMono L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 2.14e-01 0.112 0.0897 0.644 intMono L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 5.01e-01 0.057 0.0846 0.636 ncMono L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 6.46e-01 0.0415 0.0903 0.636 ncMono L2
ENSG00000134644 PUM1 -185429 sc-eQTL 5.41e-01 -0.0452 0.0737 0.636 ncMono L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 4.51e-02 0.134 0.0663 0.636 ncMono L2
ENSG00000162512 SDC3 -28196 sc-eQTL 1.98e-01 -0.0967 0.0748 0.636 ncMono L2
ENSG00000162517 PEF1 -764334 sc-eQTL 6.61e-01 -0.0378 0.0861 0.636 ncMono L2
ENSG00000168528 SERINC2 -529003 sc-eQTL 2.42e-01 0.0959 0.0817 0.636 ncMono L2
ENSG00000284543 LINC01226 -625664 sc-eQTL 4.53e-02 0.163 0.0811 0.636 ncMono L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 5.47e-01 -0.0512 0.0849 0.636 ncMono L2
ENSG00000060688 SNRNP40 -416226 sc-eQTL 5.90e-01 -0.0541 0.1 0.624 pDC L2
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 5.48e-01 -0.0661 0.11 0.624 pDC L2
ENSG00000134644 PUM1 -185429 sc-eQTL 9.74e-01 -0.00293 0.0911 0.624 pDC L2
ENSG00000162511 LAPTM5 122788 sc-eQTL 3.41e-01 0.0807 0.0845 0.624 pDC L2
ENSG00000162517 PEF1 -764334 sc-eQTL 4.72e-01 -0.0792 0.11 0.624 pDC L2
ENSG00000168528 SERINC2 -529003 sc-eQTL 4.91e-01 0.0708 0.103 0.624 pDC L2
ENSG00000284543 LINC01226 -625664 sc-eQTL 5.26e-01 0.0506 0.0797 0.624 pDC L2
ENSG00000287510 AL137857.1 148869 sc-eQTL 8.31e-01 -0.02 0.0938 0.624 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -416226 sc-eQTL 4.16e-01 -0.0789 0.0968 0.635 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 7.77e-01 -0.0228 0.0807 0.635 B_Memory LOneK1K
ENSG00000134644 PUM1 -185429 sc-eQTL 3.05e-02 -0.154 0.0707 0.635 B_Memory LOneK1K
ENSG00000162510 MATN1 156977 sc-eQTL 6.50e-02 -0.15 0.0809 0.635 B_Memory LOneK1K
ENSG00000162511 LAPTM5 122788 sc-eQTL 1.40e-01 -0.0756 0.051 0.635 B_Memory LOneK1K
ENSG00000162517 PEF1 -764334 sc-eQTL 5.68e-01 -0.0485 0.0848 0.635 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 8.33e-01 -0.0143 0.0677 0.635 B_Memory LOneK1K
ENSG00000287510 AL137857.1 148869 sc-eQTL 5.62e-02 0.141 0.0732 0.635 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -416226 sc-eQTL 4.32e-01 0.0689 0.0876 0.635 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 2.50e-01 0.0797 0.0691 0.635 B_Naive LOneK1K
ENSG00000134644 PUM1 -185429 sc-eQTL 3.24e-01 -0.0647 0.0654 0.635 B_Naive LOneK1K
ENSG00000162510 MATN1 156977 sc-eQTL 3.13e-01 0.0637 0.063 0.635 B_Naive LOneK1K
ENSG00000162511 LAPTM5 122788 sc-eQTL 6.99e-01 -0.0172 0.0444 0.635 B_Naive LOneK1K
ENSG00000162517 PEF1 -764334 sc-eQTL 9.76e-01 -0.00248 0.0812 0.635 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 9.76e-01 0.00171 0.0574 0.635 B_Naive LOneK1K
ENSG00000287510 AL137857.1 148869 sc-eQTL 1.30e-01 0.103 0.0678 0.635 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -416226 sc-eQTL 8.01e-01 0.0186 0.0737 0.635 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 4.72e-01 0.0601 0.0833 0.635 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -185429 sc-eQTL 5.32e-02 0.103 0.0527 0.635 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 122788 sc-eQTL 5.26e-01 0.0297 0.0467 0.635 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -28196 sc-eQTL 4.02e-01 -0.0799 0.0953 0.635 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -764334 sc-eQTL 3.61e-01 -0.0613 0.067 0.635 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -529003 sc-eQTL 2.70e-01 0.108 0.0979 0.635 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -625664 sc-eQTL 7.39e-01 -0.0269 0.0805 0.635 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 148869 sc-eQTL 3.79e-01 0.0663 0.0752 0.635 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -416226 sc-eQTL 9.30e-01 0.00707 0.0803 0.636 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 1.29e-01 0.133 0.0874 0.636 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -185429 sc-eQTL 6.01e-02 -0.135 0.0714 0.636 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 122788 sc-eQTL 1.78e-01 0.0774 0.0573 0.636 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -28196 sc-eQTL 1.75e-01 -0.114 0.0837 0.636 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -764334 sc-eQTL 7.39e-01 0.0255 0.0764 0.636 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -529003 sc-eQTL 4.87e-01 0.0606 0.0871 0.636 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -625664 sc-eQTL 1.42e-01 0.121 0.0823 0.636 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 148869 sc-eQTL 5.45e-01 -0.0502 0.0828 0.636 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -416226 sc-eQTL 9.08e-01 -0.0105 0.0906 0.636 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -884331 sc-eQTL 9.03e-01 0.0094 0.0772 0.636 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -416420 sc-eQTL 2.70e-01 -0.0683 0.0617 0.636 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -185429 sc-eQTL 1.28e-01 -0.103 0.0674 0.636 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 122788 sc-eQTL 3.91e-01 0.065 0.0757 0.636 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -764334 sc-eQTL 3.14e-01 0.058 0.0574 0.636 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 162058 sc-eQTL 5.86e-01 0.0476 0.0874 0.636 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 148869 sc-eQTL 5.10e-02 0.147 0.0748 0.636 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 \N 162058 3.55e-06 4.6e-06 2.5e-07 2.14e-06 7.65e-07 7.43e-07 3.33e-06 8.83e-07 2.7e-06 1.35e-06 3.76e-06 1.84e-06 5.54e-06 1.19e-06 1e-06 1.7e-06 1.64e-06 2.15e-06 1.17e-06 1.41e-06 1.11e-06 3.37e-06 3.45e-06 1.8e-06 4.62e-06 1.03e-06 1.52e-06 1.77e-06 3.74e-06 2.52e-06 2.01e-06 3.22e-07 5.18e-07 1.28e-06 1.82e-06 9.91e-07 7.95e-07 4.47e-07 1.09e-06 3.98e-07 2.87e-07 3.89e-06 6.27e-07 1.89e-07 2.74e-07 3.88e-07 3.77e-07 2.41e-07 2.24e-07