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Genes within 1Mb (chr1:30878433:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -418355 sc-eQTL 5.40e-01 0.0501 0.0817 0.596 B L1
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 7.85e-01 0.0178 0.0655 0.596 B L1
ENSG00000134644 PUM1 -187558 sc-eQTL 3.78e-01 -0.0484 0.0548 0.596 B L1
ENSG00000162510 MATN1 154848 sc-eQTL 5.42e-01 0.0353 0.0577 0.596 B L1
ENSG00000162511 LAPTM5 120659 sc-eQTL 2.39e-01 -0.0532 0.0451 0.596 B L1
ENSG00000162517 PEF1 -766463 sc-eQTL 7.23e-01 -0.0243 0.0682 0.596 B L1
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 5.81e-01 -0.0293 0.053 0.596 B L1
ENSG00000287510 AL137857.1 146740 sc-eQTL 8.29e-02 0.108 0.0623 0.596 B L1
ENSG00000060688 SNRNP40 -418355 sc-eQTL 1.51e-01 -0.103 0.0713 0.596 CD4T L1
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 6.88e-01 -0.0225 0.056 0.596 CD4T L1
ENSG00000134644 PUM1 -187558 sc-eQTL 8.88e-01 -0.00702 0.0498 0.596 CD4T L1
ENSG00000162511 LAPTM5 120659 sc-eQTL 6.63e-01 0.0241 0.0552 0.596 CD4T L1
ENSG00000162517 PEF1 -766463 sc-eQTL 6.46e-01 -0.0266 0.0577 0.596 CD4T L1
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 7.72e-01 -0.0143 0.0494 0.596 CD4T L1
ENSG00000287510 AL137857.1 146740 sc-eQTL 2.65e-01 0.0659 0.059 0.596 CD4T L1
ENSG00000060688 SNRNP40 -418355 sc-eQTL 9.78e-01 -0.00255 0.0936 0.596 CD8T L1
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 3.14e-01 0.0627 0.0621 0.596 CD8T L1
ENSG00000134644 PUM1 -187558 sc-eQTL 4.00e-02 -0.112 0.0543 0.596 CD8T L1
ENSG00000162511 LAPTM5 120659 sc-eQTL 2.50e-01 0.0612 0.0531 0.596 CD8T L1
ENSG00000162517 PEF1 -766463 sc-eQTL 6.02e-01 -0.0343 0.0656 0.596 CD8T L1
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 6.97e-02 0.113 0.0619 0.596 CD8T L1
ENSG00000287510 AL137857.1 146740 sc-eQTL 5.23e-01 0.0502 0.0784 0.596 CD8T L1
ENSG00000060688 SNRNP40 -418355 sc-eQTL 4.15e-01 -0.0671 0.0821 0.595 DC L1
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 6.39e-02 -0.18 0.0966 0.595 DC L1
ENSG00000134644 PUM1 -187558 sc-eQTL 3.91e-01 -0.0655 0.0762 0.595 DC L1
ENSG00000162511 LAPTM5 120659 sc-eQTL 4.11e-02 0.111 0.0539 0.595 DC L1
ENSG00000162517 PEF1 -766463 sc-eQTL 5.00e-01 -0.0597 0.0882 0.595 DC L1
ENSG00000168528 SERINC2 -531132 sc-eQTL 9.52e-02 0.15 0.0892 0.595 DC L1
ENSG00000284543 LINC01226 -627793 sc-eQTL 5.12e-01 0.0391 0.0594 0.595 DC L1
ENSG00000287510 AL137857.1 146740 sc-eQTL 4.74e-01 0.0618 0.086 0.595 DC L1
ENSG00000060688 SNRNP40 -418355 sc-eQTL 7.74e-01 0.0183 0.0638 0.596 Mono L1
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 9.14e-01 0.00859 0.079 0.596 Mono L1
ENSG00000134644 PUM1 -187558 sc-eQTL 2.74e-01 0.0554 0.0505 0.596 Mono L1
ENSG00000162511 LAPTM5 120659 sc-eQTL 8.46e-01 0.00907 0.0466 0.596 Mono L1
ENSG00000162512 SDC3 -30325 sc-eQTL 6.95e-02 -0.162 0.0889 0.596 Mono L1
ENSG00000162517 PEF1 -766463 sc-eQTL 2.72e-01 -0.0691 0.0627 0.596 Mono L1
ENSG00000168528 SERINC2 -531132 sc-eQTL 1.38e-01 0.142 0.0956 0.596 Mono L1
ENSG00000284543 LINC01226 -627793 sc-eQTL 9.92e-01 -0.000867 0.0847 0.596 Mono L1
ENSG00000287510 AL137857.1 146740 sc-eQTL 9.14e-01 0.00804 0.074 0.596 Mono L1
ENSG00000060688 SNRNP40 -418355 sc-eQTL 5.84e-01 0.0489 0.0893 0.597 NK L1
ENSG00000121753 ADGRB2 -886460 sc-eQTL 8.22e-01 -0.0173 0.0769 0.597 NK L1
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 1.93e-02 -0.142 0.0604 0.597 NK L1
ENSG00000134644 PUM1 -187558 sc-eQTL 5.66e-01 -0.0368 0.0641 0.597 NK L1
ENSG00000162511 LAPTM5 120659 sc-eQTL 2.14e-01 0.0918 0.0736 0.597 NK L1
ENSG00000162517 PEF1 -766463 sc-eQTL 2.58e-01 0.0609 0.0537 0.597 NK L1
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 3.38e-01 0.0795 0.0828 0.597 NK L1
ENSG00000287510 AL137857.1 146740 sc-eQTL 1.45e-02 0.186 0.0755 0.597 NK L1
ENSG00000060688 SNRNP40 -418355 sc-eQTL 9.07e-01 -0.00789 0.0675 0.596 Other_T L1
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 5.03e-02 -0.141 0.0715 0.596 Other_T L1
ENSG00000134644 PUM1 -187558 sc-eQTL 4.01e-01 0.0544 0.0648 0.596 Other_T L1
ENSG00000162511 LAPTM5 120659 sc-eQTL 8.32e-01 -0.0113 0.0532 0.596 Other_T L1
ENSG00000162517 PEF1 -766463 sc-eQTL 6.61e-01 0.0311 0.071 0.596 Other_T L1
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 6.64e-01 -0.0379 0.087 0.596 Other_T L1
ENSG00000287510 AL137857.1 146740 sc-eQTL 9.77e-01 0.00265 0.0907 0.596 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -418355 sc-eQTL 8.84e-01 0.0159 0.109 0.582 B_Activated L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 6.19e-01 -0.0546 0.11 0.582 B_Activated L2
ENSG00000134644 PUM1 -187558 sc-eQTL 1.19e-01 -0.159 0.101 0.582 B_Activated L2
ENSG00000162510 MATN1 154848 sc-eQTL 5.04e-01 -0.0597 0.0891 0.582 B_Activated L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 5.49e-01 0.0373 0.0621 0.582 B_Activated L2
ENSG00000162517 PEF1 -766463 sc-eQTL 6.22e-01 -0.0523 0.106 0.582 B_Activated L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 2.93e-01 -0.106 0.1 0.582 B_Activated L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 5.98e-01 -0.0468 0.0888 0.582 B_Activated L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 6.70e-01 0.0428 0.1 0.597 B_Intermediate L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 2.28e-01 -0.101 0.0834 0.597 B_Intermediate L2
ENSG00000134644 PUM1 -187558 sc-eQTL 6.90e-01 -0.0316 0.079 0.597 B_Intermediate L2
ENSG00000162510 MATN1 154848 sc-eQTL 3.51e-01 -0.0767 0.082 0.597 B_Intermediate L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 2.01e-01 -0.0644 0.0503 0.597 B_Intermediate L2
ENSG00000162517 PEF1 -766463 sc-eQTL 6.55e-01 -0.0419 0.0936 0.597 B_Intermediate L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 7.26e-01 -0.0249 0.0708 0.597 B_Intermediate L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 1.66e-01 0.11 0.0789 0.597 B_Intermediate L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 1.54e-01 -0.14 0.0976 0.595 B_Memory L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 5.71e-01 0.0512 0.0902 0.595 B_Memory L2
ENSG00000134644 PUM1 -187558 sc-eQTL 5.49e-01 -0.0472 0.0785 0.595 B_Memory L2
ENSG00000162510 MATN1 154848 sc-eQTL 6.26e-01 0.0366 0.0752 0.595 B_Memory L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 4.52e-02 -0.133 0.066 0.595 B_Memory L2
ENSG00000162517 PEF1 -766463 sc-eQTL 8.97e-01 0.0115 0.089 0.595 B_Memory L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 9.46e-01 -0.00522 0.0763 0.595 B_Memory L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 7.98e-02 0.156 0.0887 0.595 B_Memory L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 2.69e-01 0.0991 0.0893 0.596 B_Naive1 L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 9.92e-01 -0.000781 0.0773 0.596 B_Naive1 L2
ENSG00000134644 PUM1 -187558 sc-eQTL 6.64e-01 -0.0296 0.0682 0.596 B_Naive1 L2
ENSG00000162510 MATN1 154848 sc-eQTL 1.44e-01 0.101 0.0689 0.596 B_Naive1 L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 5.46e-01 -0.0279 0.0462 0.596 B_Naive1 L2
ENSG00000162517 PEF1 -766463 sc-eQTL 4.50e-01 0.0616 0.0814 0.596 B_Naive1 L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 6.98e-01 -0.0236 0.0607 0.596 B_Naive1 L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 1.80e-01 0.1 0.0747 0.596 B_Naive1 L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 5.57e-01 -0.0557 0.0948 0.597 B_Naive2 L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 1.26e-01 0.12 0.0779 0.597 B_Naive2 L2
ENSG00000134644 PUM1 -187558 sc-eQTL 6.12e-01 -0.039 0.0766 0.597 B_Naive2 L2
ENSG00000162510 MATN1 154848 sc-eQTL 1.57e-01 0.104 0.0733 0.597 B_Naive2 L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 3.76e-01 -0.0442 0.0499 0.597 B_Naive2 L2
ENSG00000162517 PEF1 -766463 sc-eQTL 4.63e-01 -0.0667 0.0908 0.597 B_Naive2 L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 7.11e-01 0.027 0.0728 0.597 B_Naive2 L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 2.56e-01 0.0893 0.0784 0.597 B_Naive2 L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 8.61e-01 0.0168 0.0958 0.591 CD4_CTL L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 4.18e-01 -0.0764 0.094 0.591 CD4_CTL L2
ENSG00000134644 PUM1 -187558 sc-eQTL 9.09e-01 0.0106 0.0924 0.591 CD4_CTL L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 8.16e-01 -0.0192 0.0823 0.591 CD4_CTL L2
ENSG00000162517 PEF1 -766463 sc-eQTL 1.02e-01 -0.138 0.0839 0.591 CD4_CTL L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 1.32e-01 -0.136 0.0896 0.591 CD4_CTL L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 6.36e-01 0.0377 0.0794 0.591 CD4_CTL L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 4.15e-02 -0.151 0.0736 0.596 CD4_Naive L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 6.62e-01 0.0288 0.0659 0.596 CD4_Naive L2
ENSG00000134644 PUM1 -187558 sc-eQTL 5.88e-01 -0.0286 0.0526 0.596 CD4_Naive L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 3.90e-01 0.0484 0.0563 0.596 CD4_Naive L2
ENSG00000162517 PEF1 -766463 sc-eQTL 5.90e-01 -0.0333 0.0618 0.596 CD4_Naive L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 8.90e-01 0.00795 0.0572 0.596 CD4_Naive L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 5.97e-01 0.0347 0.0657 0.596 CD4_Naive L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 8.49e-01 -0.0181 0.095 0.596 CD4_TCM L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 5.08e-01 -0.0507 0.0765 0.596 CD4_TCM L2
ENSG00000134644 PUM1 -187558 sc-eQTL 1.94e-01 0.0881 0.0676 0.596 CD4_TCM L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 7.98e-01 -0.0144 0.0563 0.596 CD4_TCM L2
ENSG00000162517 PEF1 -766463 sc-eQTL 2.59e-01 0.0851 0.0752 0.596 CD4_TCM L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 6.75e-01 -0.03 0.0714 0.596 CD4_TCM L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 3.12e-01 0.0804 0.0793 0.596 CD4_TCM L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 4.20e-01 0.0761 0.0942 0.596 CD4_TEM L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 3.42e-01 -0.0854 0.0897 0.596 CD4_TEM L2
ENSG00000134644 PUM1 -187558 sc-eQTL 6.17e-01 0.0375 0.0748 0.596 CD4_TEM L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 1.28e-01 0.115 0.0753 0.596 CD4_TEM L2
ENSG00000162517 PEF1 -766463 sc-eQTL 9.57e-02 -0.141 0.0843 0.596 CD4_TEM L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 7.01e-01 0.0341 0.0886 0.596 CD4_TEM L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 3.94e-01 0.0745 0.0872 0.596 CD4_TEM L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 6.94e-01 0.0398 0.101 0.596 CD8_CTL L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 1.72e-01 0.106 0.0773 0.596 CD8_CTL L2
ENSG00000134644 PUM1 -187558 sc-eQTL 2.29e-01 -0.0906 0.0751 0.596 CD8_CTL L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 5.90e-01 0.045 0.0834 0.596 CD8_CTL L2
ENSG00000162517 PEF1 -766463 sc-eQTL 4.93e-01 -0.0499 0.0726 0.596 CD8_CTL L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 4.29e-01 0.0695 0.0876 0.596 CD8_CTL L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 3.62e-01 0.0753 0.0824 0.596 CD8_CTL L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 9.97e-01 0.000385 0.0938 0.596 CD8_Naive L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 8.84e-01 -0.0119 0.0809 0.596 CD8_Naive L2
ENSG00000134644 PUM1 -187558 sc-eQTL 1.16e-01 -0.102 0.0647 0.596 CD8_Naive L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 8.87e-01 0.00891 0.0624 0.596 CD8_Naive L2
ENSG00000162517 PEF1 -766463 sc-eQTL 5.73e-01 0.0489 0.0867 0.596 CD8_Naive L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 2.29e-01 0.0937 0.0776 0.596 CD8_Naive L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 8.07e-01 0.0208 0.0848 0.596 CD8_Naive L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 5.00e-01 -0.0706 0.105 0.602 CD8_TCM L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 4.22e-01 0.077 0.0958 0.602 CD8_TCM L2
ENSG00000134644 PUM1 -187558 sc-eQTL 5.12e-01 0.0592 0.0901 0.602 CD8_TCM L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 1.12e-01 0.15 0.0938 0.602 CD8_TCM L2
ENSG00000162517 PEF1 -766463 sc-eQTL 2.73e-01 -0.106 0.0962 0.602 CD8_TCM L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 3.92e-01 0.0748 0.0872 0.602 CD8_TCM L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 8.99e-01 0.0112 0.0883 0.602 CD8_TCM L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 1.45e-01 -0.142 0.0969 0.594 CD8_TEM L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 2.84e-01 -0.1 0.0931 0.594 CD8_TEM L2
ENSG00000134644 PUM1 -187558 sc-eQTL 8.98e-01 -0.0123 0.0955 0.594 CD8_TEM L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 5.29e-01 -0.0565 0.0897 0.594 CD8_TEM L2
ENSG00000162517 PEF1 -766463 sc-eQTL 6.13e-01 -0.0428 0.0845 0.594 CD8_TEM L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 4.07e-01 0.0773 0.093 0.594 CD8_TEM L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 6.80e-01 -0.0348 0.0843 0.594 CD8_TEM L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 5.62e-01 -0.0577 0.0994 0.595 MAIT L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 6.79e-01 -0.0365 0.0881 0.595 MAIT L2
ENSG00000134644 PUM1 -187558 sc-eQTL 9.96e-01 -0.000457 0.0845 0.595 MAIT L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 7.54e-01 0.025 0.0797 0.595 MAIT L2
ENSG00000162517 PEF1 -766463 sc-eQTL 7.98e-01 -0.0224 0.0876 0.595 MAIT L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 2.01e-01 0.113 0.0884 0.595 MAIT L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 6.63e-01 -0.0399 0.0915 0.595 MAIT L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 9.49e-01 -0.00652 0.103 0.589 NK_CD56bright L2
ENSG00000121753 ADGRB2 -886460 sc-eQTL 3.18e-01 -0.0802 0.0801 0.589 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 1.98e-02 -0.201 0.0855 0.589 NK_CD56bright L2
ENSG00000134644 PUM1 -187558 sc-eQTL 4.71e-02 0.18 0.0901 0.589 NK_CD56bright L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 9.09e-01 0.0103 0.0897 0.589 NK_CD56bright L2
ENSG00000162517 PEF1 -766463 sc-eQTL 5.68e-01 0.0499 0.0871 0.589 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 8.57e-01 -0.0163 0.0902 0.589 NK_CD56bright L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 3.50e-01 -0.0831 0.0887 0.589 NK_CD56bright L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 5.28e-01 -0.0597 0.0943 0.597 NK_CD56dim L2
ENSG00000121753 ADGRB2 -886460 sc-eQTL 9.10e-01 -0.00945 0.0831 0.597 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 2.28e-01 -0.0841 0.0696 0.597 NK_CD56dim L2
ENSG00000134644 PUM1 -187558 sc-eQTL 5.16e-01 -0.0466 0.0716 0.597 NK_CD56dim L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 2.99e-01 0.0794 0.0762 0.597 NK_CD56dim L2
ENSG00000162517 PEF1 -766463 sc-eQTL 1.72e-01 0.0927 0.0677 0.597 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 6.62e-01 0.0419 0.0957 0.597 NK_CD56dim L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 1.41e-02 0.193 0.0778 0.597 NK_CD56dim L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 8.68e-01 -0.0167 0.1 0.584 NK_HLA L2
ENSG00000121753 ADGRB2 -886460 sc-eQTL 5.10e-01 0.0524 0.0794 0.584 NK_HLA L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 2.16e-01 -0.111 0.089 0.584 NK_HLA L2
ENSG00000134644 PUM1 -187558 sc-eQTL 6.59e-01 -0.0384 0.0871 0.584 NK_HLA L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 8.82e-01 0.0124 0.0831 0.584 NK_HLA L2
ENSG00000162517 PEF1 -766463 sc-eQTL 1.14e-01 -0.148 0.0931 0.584 NK_HLA L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 6.86e-01 0.0358 0.0884 0.584 NK_HLA L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 1.82e-03 0.264 0.0834 0.584 NK_HLA L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 1.22e-01 0.142 0.0918 0.597 NK_cytokine L2
ENSG00000121753 ADGRB2 -886460 sc-eQTL 7.01e-01 -0.0321 0.0834 0.597 NK_cytokine L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 2.58e-01 -0.0816 0.0718 0.597 NK_cytokine L2
ENSG00000134644 PUM1 -187558 sc-eQTL 1.09e-01 -0.125 0.0774 0.597 NK_cytokine L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 5.72e-01 0.0485 0.0857 0.597 NK_cytokine L2
ENSG00000162517 PEF1 -766463 sc-eQTL 6.39e-01 -0.0343 0.0731 0.597 NK_cytokine L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 5.49e-01 0.0545 0.0908 0.597 NK_cytokine L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 6.07e-02 0.158 0.0839 0.597 NK_cytokine L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 2.04e-01 0.14 0.11 0.596 PB L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 3.15e-01 -0.129 0.127 0.596 PB L2
ENSG00000134644 PUM1 -187558 sc-eQTL 9.95e-01 -0.000716 0.111 0.596 PB L2
ENSG00000162510 MATN1 154848 sc-eQTL 9.47e-01 -0.00692 0.104 0.596 PB L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 6.90e-01 0.0296 0.074 0.596 PB L2
ENSG00000162517 PEF1 -766463 sc-eQTL 4.43e-01 0.0875 0.114 0.596 PB L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 7.86e-01 -0.0276 0.101 0.596 PB L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 7.92e-01 -0.0285 0.108 0.596 PB L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 8.04e-01 0.0181 0.0727 0.593 Pro_T L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 2.33e-02 -0.208 0.0911 0.593 Pro_T L2
ENSG00000134644 PUM1 -187558 sc-eQTL 1.16e-01 0.135 0.0855 0.593 Pro_T L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 5.62e-01 -0.0359 0.0617 0.593 Pro_T L2
ENSG00000162517 PEF1 -766463 sc-eQTL 1.20e-01 -0.141 0.0901 0.593 Pro_T L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 3.23e-03 -0.252 0.0845 0.593 Pro_T L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 7.32e-01 0.0272 0.0793 0.593 Pro_T L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 4.90e-01 0.0671 0.097 0.596 Treg L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 4.26e-01 -0.0749 0.0938 0.596 Treg L2
ENSG00000134644 PUM1 -187558 sc-eQTL 6.66e-01 -0.0325 0.0752 0.596 Treg L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 8.52e-01 0.016 0.0861 0.596 Treg L2
ENSG00000162517 PEF1 -766463 sc-eQTL 9.51e-01 -0.00569 0.093 0.596 Treg L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 6.38e-01 0.0414 0.0877 0.596 Treg L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 7.89e-01 -0.0235 0.0876 0.596 Treg L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 4.67e-01 -0.0722 0.0991 0.602 cDC L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 8.85e-01 -0.0156 0.107 0.602 cDC L2
ENSG00000134644 PUM1 -187558 sc-eQTL 7.76e-01 -0.0263 0.0923 0.602 cDC L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 3.32e-01 0.0627 0.0645 0.602 cDC L2
ENSG00000162517 PEF1 -766463 sc-eQTL 7.46e-01 -0.0303 0.0936 0.602 cDC L2
ENSG00000168528 SERINC2 -531132 sc-eQTL 3.67e-01 0.0749 0.0829 0.602 cDC L2
ENSG00000284543 LINC01226 -627793 sc-eQTL 2.77e-01 -0.0887 0.0813 0.602 cDC L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 9.49e-02 0.146 0.0872 0.602 cDC L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 3.20e-01 0.0765 0.0768 0.596 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 5.52e-01 -0.051 0.0858 0.596 cMono_IL1B L2
ENSG00000134644 PUM1 -187558 sc-eQTL 1.26e-01 0.0888 0.0578 0.596 cMono_IL1B L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 4.88e-01 0.0354 0.0509 0.596 cMono_IL1B L2
ENSG00000162512 SDC3 -30325 sc-eQTL 3.04e-01 -0.0987 0.0958 0.596 cMono_IL1B L2
ENSG00000162517 PEF1 -766463 sc-eQTL 4.45e-01 -0.0599 0.0784 0.596 cMono_IL1B L2
ENSG00000168528 SERINC2 -531132 sc-eQTL 9.26e-02 0.163 0.0966 0.596 cMono_IL1B L2
ENSG00000284543 LINC01226 -627793 sc-eQTL 9.25e-01 -0.00809 0.0859 0.596 cMono_IL1B L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 1.02e-02 0.205 0.0789 0.596 cMono_IL1B L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 8.04e-01 -0.0201 0.081 0.596 cMono_S100A L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 6.89e-01 0.0384 0.0957 0.596 cMono_S100A L2
ENSG00000134644 PUM1 -187558 sc-eQTL 1.09e-01 0.111 0.0688 0.596 cMono_S100A L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 8.14e-01 -0.0125 0.0532 0.596 cMono_S100A L2
ENSG00000162512 SDC3 -30325 sc-eQTL 6.38e-01 -0.0432 0.0919 0.596 cMono_S100A L2
ENSG00000162517 PEF1 -766463 sc-eQTL 2.98e-01 -0.0863 0.0828 0.596 cMono_S100A L2
ENSG00000168528 SERINC2 -531132 sc-eQTL 2.48e-01 0.112 0.097 0.596 cMono_S100A L2
ENSG00000284543 LINC01226 -627793 sc-eQTL 9.08e-01 0.00914 0.079 0.596 cMono_S100A L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 5.70e-01 -0.0451 0.0793 0.596 cMono_S100A L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 8.60e-01 -0.0215 0.122 0.603 gdT L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 3.65e-01 -0.0948 0.104 0.603 gdT L2
ENSG00000134644 PUM1 -187558 sc-eQTL 9.77e-01 0.00311 0.108 0.603 gdT L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 8.60e-01 -0.0208 0.117 0.603 gdT L2
ENSG00000162517 PEF1 -766463 sc-eQTL 6.50e-02 0.197 0.106 0.603 gdT L2
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 6.34e-01 -0.0515 0.108 0.603 gdT L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 3.02e-01 0.108 0.104 0.603 gdT L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 9.24e-01 0.00879 0.0917 0.604 intMono L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 1.38e-01 0.146 0.098 0.604 intMono L2
ENSG00000134644 PUM1 -187558 sc-eQTL 1.93e-01 -0.109 0.0833 0.604 intMono L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 2.02e-01 0.0835 0.0653 0.604 intMono L2
ENSG00000162512 SDC3 -30325 sc-eQTL 4.30e-01 -0.071 0.0897 0.604 intMono L2
ENSG00000162517 PEF1 -766463 sc-eQTL 1.08e-01 0.152 0.0938 0.604 intMono L2
ENSG00000168528 SERINC2 -531132 sc-eQTL 1.42e-01 0.138 0.0935 0.604 intMono L2
ENSG00000284543 LINC01226 -627793 sc-eQTL 8.26e-01 0.0196 0.0891 0.604 intMono L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 3.42e-01 0.0848 0.0889 0.604 intMono L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 8.78e-01 0.013 0.0843 0.595 ncMono L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 8.40e-01 -0.0182 0.0899 0.595 ncMono L2
ENSG00000134644 PUM1 -187558 sc-eQTL 4.97e-01 -0.05 0.0734 0.595 ncMono L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 3.11e-01 0.0675 0.0665 0.595 ncMono L2
ENSG00000162512 SDC3 -30325 sc-eQTL 1.10e-01 -0.119 0.0743 0.595 ncMono L2
ENSG00000162517 PEF1 -766463 sc-eQTL 5.80e-01 -0.0475 0.0857 0.595 ncMono L2
ENSG00000168528 SERINC2 -531132 sc-eQTL 2.12e-01 0.102 0.0813 0.595 ncMono L2
ENSG00000284543 LINC01226 -627793 sc-eQTL 5.42e-02 0.156 0.0808 0.595 ncMono L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 2.35e-01 -0.1 0.0843 0.595 ncMono L2
ENSG00000060688 SNRNP40 -418355 sc-eQTL 4.23e-01 -0.0786 0.0978 0.579 pDC L2
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 2.76e-01 -0.117 0.107 0.579 pDC L2
ENSG00000134644 PUM1 -187558 sc-eQTL 6.93e-01 0.0352 0.0892 0.579 pDC L2
ENSG00000162511 LAPTM5 120659 sc-eQTL 3.69e-01 0.0745 0.0827 0.579 pDC L2
ENSG00000162517 PEF1 -766463 sc-eQTL 3.82e-01 -0.0942 0.107 0.579 pDC L2
ENSG00000168528 SERINC2 -531132 sc-eQTL 2.29e-01 0.121 0.1 0.579 pDC L2
ENSG00000284543 LINC01226 -627793 sc-eQTL 9.09e-01 0.00895 0.0781 0.579 pDC L2
ENSG00000287510 AL137857.1 146740 sc-eQTL 5.74e-01 0.0517 0.0918 0.579 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -418355 sc-eQTL 5.30e-01 -0.0605 0.0963 0.596 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 6.55e-01 -0.0359 0.0802 0.596 B_Memory LOneK1K
ENSG00000134644 PUM1 -187558 sc-eQTL 2.44e-01 -0.0828 0.0708 0.596 B_Memory LOneK1K
ENSG00000162510 MATN1 154848 sc-eQTL 1.84e-01 -0.108 0.0807 0.596 B_Memory LOneK1K
ENSG00000162511 LAPTM5 120659 sc-eQTL 8.83e-02 -0.0866 0.0506 0.596 B_Memory LOneK1K
ENSG00000162517 PEF1 -766463 sc-eQTL 6.02e-01 -0.044 0.0843 0.596 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 7.68e-01 -0.0198 0.0673 0.596 B_Memory LOneK1K
ENSG00000287510 AL137857.1 146740 sc-eQTL 7.27e-02 0.131 0.0728 0.596 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -418355 sc-eQTL 6.96e-01 0.034 0.0867 0.596 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 3.33e-01 0.0664 0.0684 0.596 B_Naive LOneK1K
ENSG00000134644 PUM1 -187558 sc-eQTL 5.17e-01 -0.0421 0.0648 0.596 B_Naive LOneK1K
ENSG00000162510 MATN1 154848 sc-eQTL 1.72e-01 0.0853 0.0622 0.596 B_Naive LOneK1K
ENSG00000162511 LAPTM5 120659 sc-eQTL 8.03e-01 -0.011 0.044 0.596 B_Naive LOneK1K
ENSG00000162517 PEF1 -766463 sc-eQTL 8.64e-01 0.0138 0.0803 0.596 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 4.60e-01 -0.042 0.0567 0.596 B_Naive LOneK1K
ENSG00000287510 AL137857.1 146740 sc-eQTL 1.10e-01 0.108 0.0671 0.596 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -418355 sc-eQTL 4.45e-01 0.0559 0.073 0.596 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 9.61e-01 -0.00405 0.0828 0.596 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -187558 sc-eQTL 6.50e-02 0.0972 0.0524 0.596 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 120659 sc-eQTL 7.02e-01 0.0178 0.0464 0.596 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -30325 sc-eQTL 2.18e-01 -0.117 0.0944 0.596 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -766463 sc-eQTL 1.55e-01 -0.0946 0.0663 0.596 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -531132 sc-eQTL 1.41e-01 0.143 0.097 0.596 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -627793 sc-eQTL 9.65e-01 0.00352 0.0799 0.596 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 146740 sc-eQTL 1.78e-01 0.101 0.0745 0.596 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -418355 sc-eQTL 9.90e-01 -0.00103 0.0798 0.597 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 3.07e-01 0.0892 0.0871 0.597 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -187558 sc-eQTL 1.21e-01 -0.111 0.0711 0.597 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 120659 sc-eQTL 5.17e-01 0.0371 0.0572 0.597 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -30325 sc-eQTL 4.66e-02 -0.166 0.0828 0.597 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -766463 sc-eQTL 8.62e-01 0.0132 0.0759 0.597 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -531132 sc-eQTL 3.72e-01 0.0774 0.0865 0.597 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -627793 sc-eQTL 8.64e-02 0.141 0.0817 0.597 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 146740 sc-eQTL 2.90e-01 -0.0871 0.0822 0.597 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -418355 sc-eQTL 6.29e-01 0.0434 0.0898 0.597 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -886460 sc-eQTL 8.85e-01 -0.0111 0.0765 0.597 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -418549 sc-eQTL 7.80e-02 -0.108 0.0609 0.597 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -187558 sc-eQTL 2.54e-01 -0.0767 0.0671 0.597 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 120659 sc-eQTL 2.94e-01 0.0788 0.075 0.597 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -766463 sc-eQTL 5.05e-01 0.0381 0.057 0.597 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 159929 sc-eQTL 2.59e-01 0.0978 0.0864 0.597 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 146740 sc-eQTL 4.57e-03 0.21 0.0734 0.597 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -418549 eQTL 4.62e-02 0.0351 0.0176 0.0 0.0 0.44

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 \N 159929 4e-06 4.98e-06 6.27e-07 3.42e-06 1.32e-06 1.05e-06 3.23e-06 9.54e-07 4.94e-06 2.45e-06 6.49e-06 3.41e-06 7.42e-06 1.52e-06 1.35e-06 2.68e-06 2.06e-06 2.75e-06 1.57e-06 1.33e-06 2.98e-06 4.86e-06 3.78e-06 1.62e-06 4.77e-06 1.3e-06 2.61e-06 1.77e-06 4.2e-06 4.12e-06 2.7e-06 5.58e-07 6.12e-07 1.82e-06 1.92e-06 1.14e-06 1.08e-06 4.92e-07 1.34e-06 4.57e-07 2.54e-07 7.31e-06 5.43e-07 1.77e-07 5.92e-07 4.11e-07 7.44e-07 4.4e-07 5.44e-07