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Genes within 1Mb (chr1:30874215:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -422573 sc-eQTL 1.69e-01 0.112 0.0812 0.605 B L1
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 3.31e-01 0.0635 0.0652 0.605 B L1
ENSG00000134644 PUM1 -191776 sc-eQTL 2.68e-01 -0.0607 0.0547 0.605 B L1
ENSG00000162510 MATN1 150630 sc-eQTL 7.60e-01 0.0177 0.0576 0.605 B L1
ENSG00000162511 LAPTM5 116441 sc-eQTL 6.50e-02 -0.083 0.0448 0.605 B L1
ENSG00000162517 PEF1 -770681 sc-eQTL 7.21e-01 -0.0244 0.0681 0.605 B L1
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 3.35e-01 -0.051 0.0528 0.605 B L1
ENSG00000287510 AL137857.1 142522 sc-eQTL 3.32e-01 0.0607 0.0625 0.605 B L1
ENSG00000060688 SNRNP40 -422573 sc-eQTL 7.13e-01 -0.0263 0.0714 0.605 CD4T L1
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 9.42e-01 -0.00404 0.0558 0.605 CD4T L1
ENSG00000134644 PUM1 -191776 sc-eQTL 6.57e-01 0.0221 0.0496 0.605 CD4T L1
ENSG00000162511 LAPTM5 116441 sc-eQTL 4.77e-01 0.0392 0.055 0.605 CD4T L1
ENSG00000162517 PEF1 -770681 sc-eQTL 4.26e-01 -0.0459 0.0575 0.605 CD4T L1
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 7.31e-01 -0.0169 0.0492 0.605 CD4T L1
ENSG00000287510 AL137857.1 142522 sc-eQTL 4.82e-01 0.0414 0.0589 0.605 CD4T L1
ENSG00000060688 SNRNP40 -422573 sc-eQTL 7.12e-01 0.0344 0.093 0.605 CD8T L1
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 8.40e-02 0.107 0.0615 0.605 CD8T L1
ENSG00000134644 PUM1 -191776 sc-eQTL 1.75e-02 -0.129 0.0538 0.605 CD8T L1
ENSG00000162511 LAPTM5 116441 sc-eQTL 3.74e-01 0.047 0.0528 0.605 CD8T L1
ENSG00000162517 PEF1 -770681 sc-eQTL 9.25e-01 0.00612 0.0652 0.605 CD8T L1
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 6.13e-02 0.116 0.0615 0.605 CD8T L1
ENSG00000287510 AL137857.1 142522 sc-eQTL 7.16e-01 0.0283 0.0779 0.605 CD8T L1
ENSG00000060688 SNRNP40 -422573 sc-eQTL 2.98e-01 -0.0862 0.0827 0.604 DC L1
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 9.68e-02 -0.163 0.0975 0.604 DC L1
ENSG00000134644 PUM1 -191776 sc-eQTL 8.44e-01 -0.0151 0.0769 0.604 DC L1
ENSG00000162511 LAPTM5 116441 sc-eQTL 3.05e-02 0.118 0.0542 0.604 DC L1
ENSG00000162517 PEF1 -770681 sc-eQTL 3.72e-01 -0.0794 0.0888 0.604 DC L1
ENSG00000168528 SERINC2 -535350 sc-eQTL 1.74e-01 0.123 0.0901 0.604 DC L1
ENSG00000284543 LINC01226 -632011 sc-eQTL 3.08e-01 0.0612 0.0598 0.604 DC L1
ENSG00000287510 AL137857.1 142522 sc-eQTL 9.40e-01 0.00658 0.0868 0.604 DC L1
ENSG00000060688 SNRNP40 -422573 sc-eQTL 6.88e-01 0.0257 0.0638 0.605 Mono L1
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 4.39e-01 0.0612 0.079 0.605 Mono L1
ENSG00000134644 PUM1 -191776 sc-eQTL 3.46e-01 0.0478 0.0506 0.605 Mono L1
ENSG00000162511 LAPTM5 116441 sc-eQTL 7.32e-01 0.016 0.0467 0.605 Mono L1
ENSG00000162512 SDC3 -34543 sc-eQTL 1.44e-01 -0.131 0.0892 0.605 Mono L1
ENSG00000162517 PEF1 -770681 sc-eQTL 3.20e-01 -0.0626 0.0628 0.605 Mono L1
ENSG00000168528 SERINC2 -535350 sc-eQTL 2.85e-01 0.103 0.096 0.605 Mono L1
ENSG00000284543 LINC01226 -632011 sc-eQTL 7.10e-01 0.0316 0.0847 0.605 Mono L1
ENSG00000287510 AL137857.1 142522 sc-eQTL 4.56e-01 0.0552 0.074 0.605 Mono L1
ENSG00000060688 SNRNP40 -422573 sc-eQTL 3.90e-01 0.0765 0.0889 0.605 NK L1
ENSG00000121753 ADGRB2 -890678 sc-eQTL 9.99e-01 -0.000122 0.0767 0.605 NK L1
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 1.11e-01 -0.0969 0.0606 0.605 NK L1
ENSG00000134644 PUM1 -191776 sc-eQTL 3.45e-01 -0.0603 0.0638 0.605 NK L1
ENSG00000162511 LAPTM5 116441 sc-eQTL 3.55e-01 0.068 0.0734 0.605 NK L1
ENSG00000162517 PEF1 -770681 sc-eQTL 3.12e-02 0.115 0.0531 0.605 NK L1
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 2.16e-01 0.102 0.0824 0.605 NK L1
ENSG00000287510 AL137857.1 142522 sc-eQTL 4.34e-02 0.154 0.0756 0.605 NK L1
ENSG00000060688 SNRNP40 -422573 sc-eQTL 8.35e-01 -0.014 0.0671 0.605 Other_T L1
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 8.97e-02 -0.121 0.0713 0.605 Other_T L1
ENSG00000134644 PUM1 -191776 sc-eQTL 4.13e-01 0.0528 0.0644 0.605 Other_T L1
ENSG00000162511 LAPTM5 116441 sc-eQTL 8.55e-01 0.0097 0.0529 0.605 Other_T L1
ENSG00000162517 PEF1 -770681 sc-eQTL 8.94e-01 0.00946 0.0706 0.605 Other_T L1
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 8.84e-01 0.0127 0.0866 0.605 Other_T L1
ENSG00000287510 AL137857.1 142522 sc-eQTL 6.66e-01 -0.039 0.0901 0.605 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -422573 sc-eQTL 8.20e-01 -0.0247 0.109 0.597 B_Activated L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 9.78e-01 0.00302 0.11 0.597 B_Activated L2
ENSG00000134644 PUM1 -191776 sc-eQTL 9.08e-02 -0.172 0.101 0.597 B_Activated L2
ENSG00000162510 MATN1 150630 sc-eQTL 7.84e-01 -0.0245 0.0891 0.597 B_Activated L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 8.70e-01 -0.0102 0.0621 0.597 B_Activated L2
ENSG00000162517 PEF1 -770681 sc-eQTL 3.22e-01 -0.105 0.105 0.597 B_Activated L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 2.39e-01 -0.118 0.0999 0.597 B_Activated L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 3.56e-01 -0.0819 0.0886 0.597 B_Activated L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 4.50e-01 0.076 0.1 0.605 B_Intermediate L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 3.47e-01 -0.0788 0.0836 0.605 B_Intermediate L2
ENSG00000134644 PUM1 -191776 sc-eQTL 5.16e-01 -0.0514 0.0789 0.605 B_Intermediate L2
ENSG00000162510 MATN1 150630 sc-eQTL 6.16e-01 -0.0412 0.0822 0.605 B_Intermediate L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 7.95e-02 -0.0883 0.0501 0.605 B_Intermediate L2
ENSG00000162517 PEF1 -770681 sc-eQTL 7.89e-01 -0.0251 0.0937 0.605 B_Intermediate L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 7.11e-01 -0.0263 0.0708 0.605 B_Intermediate L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 1.29e-01 0.12 0.0788 0.605 B_Intermediate L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 5.18e-01 -0.063 0.0974 0.603 B_Memory L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 2.48e-01 0.104 0.0896 0.603 B_Memory L2
ENSG00000134644 PUM1 -191776 sc-eQTL 3.52e-01 -0.0727 0.078 0.603 B_Memory L2
ENSG00000162510 MATN1 150630 sc-eQTL 5.30e-01 0.047 0.0747 0.603 B_Memory L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 4.45e-02 -0.133 0.0657 0.603 B_Memory L2
ENSG00000162517 PEF1 -770681 sc-eQTL 7.06e-01 0.0334 0.0885 0.603 B_Memory L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 7.47e-01 -0.0245 0.0759 0.603 B_Memory L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 1.36e-01 0.132 0.0884 0.603 B_Memory L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 2.46e-01 0.103 0.0889 0.605 B_Naive1 L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 7.59e-01 0.0237 0.077 0.605 B_Naive1 L2
ENSG00000134644 PUM1 -191776 sc-eQTL 4.18e-01 -0.0551 0.0678 0.605 B_Naive1 L2
ENSG00000162510 MATN1 150630 sc-eQTL 2.66e-01 0.0767 0.0687 0.605 B_Naive1 L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 1.24e-01 -0.0707 0.0458 0.605 B_Naive1 L2
ENSG00000162517 PEF1 -770681 sc-eQTL 2.58e-01 0.0918 0.0809 0.605 B_Naive1 L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 8.62e-01 -0.0105 0.0605 0.605 B_Naive1 L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 7.13e-01 0.0275 0.0747 0.605 B_Naive1 L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 9.23e-01 -0.00918 0.0953 0.605 B_Naive2 L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 4.41e-01 0.0607 0.0786 0.605 B_Naive2 L2
ENSG00000134644 PUM1 -191776 sc-eQTL 7.43e-01 -0.0252 0.077 0.605 B_Naive2 L2
ENSG00000162510 MATN1 150630 sc-eQTL 5.94e-01 0.0395 0.0739 0.605 B_Naive2 L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 4.66e-02 -0.0995 0.0497 0.605 B_Naive2 L2
ENSG00000162517 PEF1 -770681 sc-eQTL 5.47e-01 -0.055 0.0912 0.605 B_Naive2 L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 8.94e-01 0.00971 0.0731 0.605 B_Naive2 L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 3.65e-01 0.0715 0.0788 0.605 B_Naive2 L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 5.17e-01 -0.062 0.0954 0.6 CD4_CTL L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 3.42e-01 -0.0891 0.0937 0.6 CD4_CTL L2
ENSG00000134644 PUM1 -191776 sc-eQTL 2.95e-01 0.0964 0.0918 0.6 CD4_CTL L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 5.25e-01 0.0522 0.082 0.6 CD4_CTL L2
ENSG00000162517 PEF1 -770681 sc-eQTL 3.68e-01 -0.0758 0.084 0.6 CD4_CTL L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 5.15e-01 -0.0585 0.0897 0.6 CD4_CTL L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 7.20e-01 0.0285 0.0792 0.6 CD4_CTL L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 1.19e-01 -0.115 0.0738 0.605 CD4_Naive L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 3.38e-01 0.063 0.0656 0.605 CD4_Naive L2
ENSG00000134644 PUM1 -191776 sc-eQTL 6.86e-01 -0.0213 0.0525 0.605 CD4_Naive L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 3.24e-01 0.0555 0.0562 0.605 CD4_Naive L2
ENSG00000162517 PEF1 -770681 sc-eQTL 3.44e-01 -0.0584 0.0616 0.605 CD4_Naive L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 8.83e-01 -0.00841 0.0571 0.605 CD4_Naive L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 8.11e-01 0.0157 0.0656 0.605 CD4_Naive L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 2.38e-01 0.111 0.0936 0.605 CD4_TCM L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 9.96e-01 0.00035 0.0757 0.605 CD4_TCM L2
ENSG00000134644 PUM1 -191776 sc-eQTL 5.98e-02 0.126 0.0665 0.605 CD4_TCM L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 9.63e-01 0.00257 0.0556 0.605 CD4_TCM L2
ENSG00000162517 PEF1 -770681 sc-eQTL 3.69e-01 0.067 0.0744 0.605 CD4_TCM L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 5.67e-01 -0.0404 0.0705 0.605 CD4_TCM L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 4.42e-01 0.0604 0.0785 0.605 CD4_TCM L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 3.10e-01 0.0951 0.0935 0.605 CD4_TEM L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 2.54e-01 -0.102 0.089 0.605 CD4_TEM L2
ENSG00000134644 PUM1 -191776 sc-eQTL 4.66e-01 0.0542 0.0743 0.605 CD4_TEM L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 1.73e-01 0.103 0.0749 0.605 CD4_TEM L2
ENSG00000162517 PEF1 -770681 sc-eQTL 6.19e-01 -0.0419 0.0842 0.605 CD4_TEM L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 8.64e-01 0.0151 0.088 0.605 CD4_TEM L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 1.87e-01 0.114 0.0864 0.605 CD4_TEM L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 5.49e-01 0.0609 0.101 0.605 CD8_CTL L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 1.68e-01 0.107 0.0775 0.605 CD8_CTL L2
ENSG00000134644 PUM1 -191776 sc-eQTL 1.51e-01 -0.108 0.0753 0.605 CD8_CTL L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 7.07e-01 0.0315 0.0837 0.605 CD8_CTL L2
ENSG00000162517 PEF1 -770681 sc-eQTL 1.54e-01 -0.104 0.0726 0.605 CD8_CTL L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 3.87e-01 0.0762 0.0879 0.605 CD8_CTL L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 1.47e-01 0.12 0.0824 0.605 CD8_CTL L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 5.60e-01 0.0547 0.0938 0.605 CD8_Naive L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 6.98e-01 0.0314 0.0809 0.605 CD8_Naive L2
ENSG00000134644 PUM1 -191776 sc-eQTL 9.63e-02 -0.108 0.0647 0.605 CD8_Naive L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 8.87e-01 0.00887 0.0624 0.605 CD8_Naive L2
ENSG00000162517 PEF1 -770681 sc-eQTL 3.17e-01 0.0869 0.0866 0.605 CD8_Naive L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 3.08e-01 0.0795 0.0777 0.605 CD8_Naive L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 9.06e-01 0.01 0.0848 0.605 CD8_Naive L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 4.69e-01 -0.0754 0.104 0.611 CD8_TCM L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 6.45e-01 0.044 0.0953 0.611 CD8_TCM L2
ENSG00000134644 PUM1 -191776 sc-eQTL 4.65e-01 0.0655 0.0895 0.611 CD8_TCM L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 1.02e-01 0.153 0.0932 0.611 CD8_TCM L2
ENSG00000162517 PEF1 -770681 sc-eQTL 2.73e-01 -0.105 0.0956 0.611 CD8_TCM L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 6.30e-01 0.0419 0.0868 0.611 CD8_TCM L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 9.61e-01 -0.00427 0.0878 0.611 CD8_TCM L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 3.95e-01 -0.0826 0.097 0.605 CD8_TEM L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 6.13e-01 -0.0471 0.0931 0.605 CD8_TEM L2
ENSG00000134644 PUM1 -191776 sc-eQTL 6.97e-01 -0.0371 0.0952 0.605 CD8_TEM L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 7.92e-01 0.0237 0.0895 0.605 CD8_TEM L2
ENSG00000162517 PEF1 -770681 sc-eQTL 6.91e-01 0.0336 0.0842 0.605 CD8_TEM L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 4.81e-01 0.0656 0.0928 0.605 CD8_TEM L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 8.01e-01 -0.0212 0.0841 0.605 CD8_TEM L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 6.16e-01 -0.0499 0.0994 0.604 MAIT L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 5.90e-01 -0.0475 0.088 0.604 MAIT L2
ENSG00000134644 PUM1 -191776 sc-eQTL 9.42e-01 -0.00614 0.0844 0.604 MAIT L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 9.39e-01 0.00614 0.0796 0.604 MAIT L2
ENSG00000162517 PEF1 -770681 sc-eQTL 8.83e-01 0.0129 0.0875 0.604 MAIT L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 4.58e-02 0.177 0.0879 0.604 MAIT L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 3.92e-01 -0.0783 0.0913 0.604 MAIT L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 7.58e-01 0.0318 0.103 0.6 NK_CD56bright L2
ENSG00000121753 ADGRB2 -890678 sc-eQTL 3.41e-01 -0.0767 0.0804 0.6 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 5.65e-02 -0.165 0.0862 0.6 NK_CD56bright L2
ENSG00000134644 PUM1 -191776 sc-eQTL 1.08e-01 0.147 0.0907 0.6 NK_CD56bright L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 9.55e-01 -0.00511 0.0901 0.6 NK_CD56bright L2
ENSG00000162517 PEF1 -770681 sc-eQTL 2.73e-01 0.0959 0.0872 0.6 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 9.32e-01 -0.00769 0.0905 0.6 NK_CD56bright L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 4.51e-01 -0.0672 0.089 0.6 NK_CD56bright L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 8.67e-01 0.0158 0.0944 0.606 NK_CD56dim L2
ENSG00000121753 ADGRB2 -890678 sc-eQTL 9.93e-01 -0.000731 0.0831 0.606 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 3.99e-01 -0.0589 0.0697 0.606 NK_CD56dim L2
ENSG00000134644 PUM1 -191776 sc-eQTL 9.44e-01 0.00507 0.0716 0.606 NK_CD56dim L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 4.76e-01 0.0544 0.0763 0.606 NK_CD56dim L2
ENSG00000162517 PEF1 -770681 sc-eQTL 2.54e-02 0.151 0.0672 0.606 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 3.65e-01 0.0867 0.0955 0.606 NK_CD56dim L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 1.09e-01 0.126 0.0785 0.606 NK_CD56dim L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 8.09e-01 0.024 0.0994 0.594 NK_HLA L2
ENSG00000121753 ADGRB2 -890678 sc-eQTL 2.08e-01 0.0994 0.0786 0.594 NK_HLA L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 6.39e-01 -0.0417 0.0887 0.594 NK_HLA L2
ENSG00000134644 PUM1 -191776 sc-eQTL 2.33e-01 -0.103 0.0862 0.594 NK_HLA L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 8.08e-01 -0.0201 0.0825 0.594 NK_HLA L2
ENSG00000162517 PEF1 -770681 sc-eQTL 3.00e-01 -0.0964 0.0928 0.594 NK_HLA L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 3.88e-01 0.0759 0.0877 0.594 NK_HLA L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 4.62e-03 0.238 0.0832 0.594 NK_HLA L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 3.55e-01 0.085 0.0917 0.606 NK_cytokine L2
ENSG00000121753 ADGRB2 -890678 sc-eQTL 6.90e-01 -0.0331 0.0829 0.606 NK_cytokine L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 5.00e-01 -0.0484 0.0716 0.606 NK_cytokine L2
ENSG00000134644 PUM1 -191776 sc-eQTL 2.67e-02 -0.171 0.0766 0.606 NK_cytokine L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 9.04e-01 0.0103 0.0853 0.606 NK_cytokine L2
ENSG00000162517 PEF1 -770681 sc-eQTL 9.10e-01 0.00824 0.0727 0.606 NK_cytokine L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 6.46e-01 0.0416 0.0904 0.606 NK_cytokine L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 6.49e-02 0.155 0.0835 0.606 NK_cytokine L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 6.07e-01 0.0585 0.113 0.615 PB L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 2.39e-01 -0.155 0.131 0.615 PB L2
ENSG00000134644 PUM1 -191776 sc-eQTL 8.93e-01 0.0155 0.114 0.615 PB L2
ENSG00000162510 MATN1 150630 sc-eQTL 9.03e-01 -0.013 0.106 0.615 PB L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 7.58e-01 0.0235 0.076 0.615 PB L2
ENSG00000162517 PEF1 -770681 sc-eQTL 6.55e-01 0.0524 0.117 0.615 PB L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 8.54e-01 -0.0193 0.104 0.615 PB L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 9.23e-01 0.0108 0.111 0.615 PB L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 9.56e-01 0.00398 0.0722 0.602 Pro_T L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 1.74e-02 -0.217 0.0904 0.602 Pro_T L2
ENSG00000134644 PUM1 -191776 sc-eQTL 2.74e-01 0.0935 0.0853 0.602 Pro_T L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 8.23e-01 -0.0137 0.0613 0.602 Pro_T L2
ENSG00000162517 PEF1 -770681 sc-eQTL 2.03e-01 -0.114 0.0897 0.602 Pro_T L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 4.91e-02 -0.168 0.0849 0.602 Pro_T L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 4.93e-01 -0.0541 0.0788 0.602 Pro_T L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 2.52e-01 0.111 0.0964 0.605 Treg L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 1.23e-01 -0.144 0.093 0.605 Treg L2
ENSG00000134644 PUM1 -191776 sc-eQTL 8.49e-01 -0.0142 0.0748 0.605 Treg L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 5.03e-01 0.0574 0.0856 0.605 Treg L2
ENSG00000162517 PEF1 -770681 sc-eQTL 5.40e-01 0.0568 0.0925 0.605 Treg L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 1.81e-01 0.117 0.087 0.605 Treg L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 8.96e-01 -0.0115 0.0872 0.605 Treg L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 6.53e-01 -0.0451 0.1 0.612 cDC L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 9.65e-01 0.00477 0.109 0.612 cDC L2
ENSG00000134644 PUM1 -191776 sc-eQTL 4.07e-01 0.0774 0.0931 0.612 cDC L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 1.61e-01 0.0915 0.065 0.612 cDC L2
ENSG00000162517 PEF1 -770681 sc-eQTL 6.23e-01 -0.0466 0.0946 0.612 cDC L2
ENSG00000168528 SERINC2 -535350 sc-eQTL 3.69e-01 0.0754 0.0837 0.612 cDC L2
ENSG00000284543 LINC01226 -632011 sc-eQTL 9.17e-01 -0.00862 0.0825 0.612 cDC L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 2.09e-01 0.111 0.0884 0.612 cDC L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 1.82e-01 0.102 0.0764 0.605 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 9.00e-01 0.0108 0.0855 0.605 cMono_IL1B L2
ENSG00000134644 PUM1 -191776 sc-eQTL 2.15e-01 0.0717 0.0577 0.605 cMono_IL1B L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 7.91e-01 0.0135 0.0508 0.605 cMono_IL1B L2
ENSG00000162512 SDC3 -34543 sc-eQTL 3.41e-01 -0.0912 0.0955 0.605 cMono_IL1B L2
ENSG00000162517 PEF1 -770681 sc-eQTL 6.65e-01 -0.0339 0.0782 0.605 cMono_IL1B L2
ENSG00000168528 SERINC2 -535350 sc-eQTL 2.04e-01 0.123 0.0965 0.605 cMono_IL1B L2
ENSG00000284543 LINC01226 -632011 sc-eQTL 9.56e-01 0.00473 0.0857 0.605 cMono_IL1B L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 7.88e-03 0.211 0.0786 0.605 cMono_IL1B L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 7.71e-01 -0.0234 0.0806 0.605 cMono_S100A L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 7.20e-01 0.0342 0.0952 0.605 cMono_S100A L2
ENSG00000134644 PUM1 -191776 sc-eQTL 8.47e-02 0.118 0.0683 0.605 cMono_S100A L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 9.53e-01 0.00315 0.0529 0.605 cMono_S100A L2
ENSG00000162512 SDC3 -34543 sc-eQTL 9.65e-01 0.00407 0.0914 0.605 cMono_S100A L2
ENSG00000162517 PEF1 -770681 sc-eQTL 1.55e-01 -0.117 0.0821 0.605 cMono_S100A L2
ENSG00000168528 SERINC2 -535350 sc-eQTL 3.30e-01 0.0942 0.0965 0.605 cMono_S100A L2
ENSG00000284543 LINC01226 -632011 sc-eQTL 9.20e-01 0.00786 0.0786 0.605 cMono_S100A L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 8.86e-01 -0.0113 0.0789 0.605 cMono_S100A L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 6.37e-01 -0.0584 0.124 0.621 gdT L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 7.03e-01 -0.0406 0.106 0.621 gdT L2
ENSG00000134644 PUM1 -191776 sc-eQTL 7.86e-01 -0.0298 0.11 0.621 gdT L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 5.28e-01 0.0753 0.119 0.621 gdT L2
ENSG00000162517 PEF1 -770681 sc-eQTL 2.28e-01 0.131 0.108 0.621 gdT L2
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 1.54e-01 -0.156 0.109 0.621 gdT L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 1.83e-01 0.142 0.106 0.621 gdT L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 7.21e-01 0.0325 0.091 0.611 intMono L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 2.30e-01 0.117 0.0975 0.611 intMono L2
ENSG00000134644 PUM1 -191776 sc-eQTL 1.05e-01 -0.134 0.0825 0.611 intMono L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 2.01e-01 0.0832 0.0649 0.611 intMono L2
ENSG00000162512 SDC3 -34543 sc-eQTL 2.08e-01 -0.112 0.0888 0.611 intMono L2
ENSG00000162517 PEF1 -770681 sc-eQTL 2.69e-01 0.104 0.0934 0.611 intMono L2
ENSG00000168528 SERINC2 -535350 sc-eQTL 1.22e-01 0.144 0.0928 0.611 intMono L2
ENSG00000284543 LINC01226 -632011 sc-eQTL 6.40e-01 -0.0414 0.0884 0.611 intMono L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 5.21e-01 0.0568 0.0884 0.611 intMono L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 7.19e-01 0.0303 0.0841 0.606 ncMono L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 5.59e-01 0.0525 0.0896 0.606 ncMono L2
ENSG00000134644 PUM1 -191776 sc-eQTL 3.92e-01 -0.0628 0.0732 0.606 ncMono L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 4.73e-01 0.0479 0.0665 0.606 ncMono L2
ENSG00000162512 SDC3 -34543 sc-eQTL 1.82e-01 -0.0995 0.0743 0.606 ncMono L2
ENSG00000162517 PEF1 -770681 sc-eQTL 9.22e-01 -0.00843 0.0856 0.606 ncMono L2
ENSG00000168528 SERINC2 -535350 sc-eQTL 2.78e-01 0.0883 0.0812 0.606 ncMono L2
ENSG00000284543 LINC01226 -632011 sc-eQTL 1.21e-01 0.126 0.0809 0.606 ncMono L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 1.21e-01 -0.131 0.0839 0.606 ncMono L2
ENSG00000060688 SNRNP40 -422573 sc-eQTL 5.23e-01 -0.0633 0.0988 0.599 pDC L2
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 3.88e-01 -0.0938 0.108 0.599 pDC L2
ENSG00000134644 PUM1 -191776 sc-eQTL 9.89e-01 -0.00121 0.09 0.599 pDC L2
ENSG00000162511 LAPTM5 116441 sc-eQTL 4.67e-01 0.061 0.0835 0.599 pDC L2
ENSG00000162517 PEF1 -770681 sc-eQTL 3.60e-01 -0.0995 0.108 0.599 pDC L2
ENSG00000168528 SERINC2 -535350 sc-eQTL 7.19e-01 0.0366 0.101 0.599 pDC L2
ENSG00000284543 LINC01226 -632011 sc-eQTL 9.42e-01 0.00571 0.0788 0.599 pDC L2
ENSG00000287510 AL137857.1 142522 sc-eQTL 8.77e-01 0.0144 0.0927 0.599 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -422573 sc-eQTL 9.89e-01 0.00133 0.0959 0.605 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 7.48e-01 0.0256 0.0798 0.605 B_Memory LOneK1K
ENSG00000134644 PUM1 -191776 sc-eQTL 1.43e-01 -0.104 0.0704 0.605 B_Memory LOneK1K
ENSG00000162510 MATN1 150630 sc-eQTL 4.77e-01 -0.0574 0.0806 0.605 B_Memory LOneK1K
ENSG00000162511 LAPTM5 116441 sc-eQTL 5.32e-02 -0.0977 0.0502 0.605 B_Memory LOneK1K
ENSG00000162517 PEF1 -770681 sc-eQTL 7.12e-01 -0.031 0.0839 0.605 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 4.58e-01 -0.0498 0.067 0.605 B_Memory LOneK1K
ENSG00000287510 AL137857.1 142522 sc-eQTL 1.18e-01 0.114 0.0727 0.605 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -422573 sc-eQTL 4.60e-01 0.0642 0.0867 0.605 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 3.61e-01 0.0627 0.0685 0.605 B_Naive LOneK1K
ENSG00000134644 PUM1 -191776 sc-eQTL 4.49e-01 -0.0492 0.0648 0.605 B_Naive LOneK1K
ENSG00000162510 MATN1 150630 sc-eQTL 4.59e-01 0.0463 0.0624 0.605 B_Naive LOneK1K
ENSG00000162511 LAPTM5 116441 sc-eQTL 1.87e-01 -0.058 0.0438 0.605 B_Naive LOneK1K
ENSG00000162517 PEF1 -770681 sc-eQTL 5.96e-01 0.0426 0.0803 0.605 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 5.38e-01 -0.035 0.0568 0.605 B_Naive LOneK1K
ENSG00000287510 AL137857.1 142522 sc-eQTL 3.41e-01 0.0643 0.0674 0.605 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -422573 sc-eQTL 4.27e-01 0.058 0.0729 0.605 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 6.99e-01 0.032 0.0826 0.605 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -191776 sc-eQTL 1.02e-01 0.0861 0.0524 0.605 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 116441 sc-eQTL 7.38e-01 0.0155 0.0463 0.605 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -34543 sc-eQTL 3.95e-01 -0.0805 0.0944 0.605 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -770681 sc-eQTL 1.54e-01 -0.0947 0.0662 0.605 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -535350 sc-eQTL 2.54e-01 0.111 0.097 0.605 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -632011 sc-eQTL 7.01e-01 0.0306 0.0797 0.605 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 142522 sc-eQTL 7.40e-02 0.133 0.0741 0.605 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -422573 sc-eQTL 9.80e-01 -0.00199 0.0797 0.606 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 1.22e-01 0.135 0.0867 0.606 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -191776 sc-eQTL 1.76e-01 -0.0966 0.0712 0.606 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 116441 sc-eQTL 5.20e-01 0.0368 0.0571 0.606 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -34543 sc-eQTL 7.26e-02 -0.15 0.0828 0.606 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -770681 sc-eQTL 7.70e-01 0.0222 0.0759 0.606 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -535350 sc-eQTL 4.33e-01 0.068 0.0865 0.606 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -632011 sc-eQTL 2.18e-01 0.101 0.0819 0.606 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 142522 sc-eQTL 1.70e-01 -0.113 0.0819 0.606 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -422573 sc-eQTL 4.07e-01 0.0743 0.0894 0.606 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -890678 sc-eQTL 9.05e-01 0.00908 0.0763 0.606 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -422767 sc-eQTL 3.66e-01 -0.0553 0.061 0.606 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -191776 sc-eQTL 2.05e-01 -0.085 0.0668 0.606 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 116441 sc-eQTL 4.46e-01 0.0571 0.0748 0.606 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -770681 sc-eQTL 1.15e-01 0.0896 0.0566 0.606 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 155711 sc-eQTL 1.74e-01 0.117 0.086 0.606 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 142522 sc-eQTL 2.84e-02 0.163 0.0737 0.606 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 \N 155711 4.7e-06 6.19e-06 6.63e-07 4.02e-06 1.59e-06 1.93e-06 5.56e-06 1.04e-06 5.03e-06 2.44e-06 5.99e-06 3.37e-06 7.51e-06 2.13e-06 1.16e-06 2.92e-06 2.24e-06 2.87e-06 1.45e-06 1.16e-06 2.89e-06 4.9e-06 4.42e-06 1.36e-06 7.15e-06 1.33e-06 2.42e-06 1.78e-06 4.21e-06 4.67e-06 2.85e-06 4.15e-07 6.12e-07 1.96e-06 1.93e-06 9.71e-07 1.11e-06 5.46e-07 9.26e-07 8.28e-07 3.75e-07 5.65e-06 1.39e-06 1.66e-07 4.2e-07 1.32e-06 7.44e-07 4.26e-07 1.78e-07