logo

Genes within 1Mb (chr1:30867754:C:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -429034 sc-eQTL 1.69e-01 0.112 0.0813 0.624 B L1
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 6.36e-01 0.031 0.0653 0.624 B L1
ENSG00000134644 PUM1 -198237 sc-eQTL 3.28e-01 -0.0537 0.0547 0.624 B L1
ENSG00000162510 MATN1 144169 sc-eQTL 4.61e-01 0.0425 0.0576 0.624 B L1
ENSG00000162511 LAPTM5 109980 sc-eQTL 1.10e-01 -0.072 0.0449 0.624 B L1
ENSG00000162517 PEF1 -777142 sc-eQTL 6.19e-01 -0.034 0.0681 0.624 B L1
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 2.82e-01 -0.0569 0.0528 0.624 B L1
ENSG00000287510 AL137857.1 136061 sc-eQTL 4.37e-01 0.0487 0.0625 0.624 B L1
ENSG00000060688 SNRNP40 -429034 sc-eQTL 5.53e-01 -0.0424 0.0715 0.624 CD4T L1
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 9.70e-01 -0.00208 0.0559 0.624 CD4T L1
ENSG00000134644 PUM1 -198237 sc-eQTL 6.43e-01 0.0231 0.0498 0.624 CD4T L1
ENSG00000162511 LAPTM5 109980 sc-eQTL 6.48e-01 0.0252 0.0551 0.624 CD4T L1
ENSG00000162517 PEF1 -777142 sc-eQTL 2.01e-01 -0.0738 0.0575 0.624 CD4T L1
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 7.12e-01 -0.0182 0.0493 0.624 CD4T L1
ENSG00000287510 AL137857.1 136061 sc-eQTL 7.91e-01 0.0157 0.0591 0.624 CD4T L1
ENSG00000060688 SNRNP40 -429034 sc-eQTL 9.19e-01 0.00947 0.0929 0.624 CD8T L1
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 1.50e-01 0.0889 0.0615 0.624 CD8T L1
ENSG00000134644 PUM1 -198237 sc-eQTL 3.39e-02 -0.115 0.0539 0.624 CD8T L1
ENSG00000162511 LAPTM5 109980 sc-eQTL 5.03e-01 0.0354 0.0528 0.624 CD8T L1
ENSG00000162517 PEF1 -777142 sc-eQTL 8.67e-01 -0.0109 0.0651 0.624 CD8T L1
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 1.11e-01 0.0985 0.0616 0.624 CD8T L1
ENSG00000287510 AL137857.1 136061 sc-eQTL 8.52e-01 0.0145 0.0779 0.624 CD8T L1
ENSG00000060688 SNRNP40 -429034 sc-eQTL 4.96e-01 -0.0566 0.083 0.624 DC L1
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 2.86e-01 -0.105 0.0981 0.624 DC L1
ENSG00000134644 PUM1 -198237 sc-eQTL 8.00e-01 0.0195 0.077 0.624 DC L1
ENSG00000162511 LAPTM5 109980 sc-eQTL 2.45e-01 0.0639 0.0548 0.624 DC L1
ENSG00000162517 PEF1 -777142 sc-eQTL 4.57e-01 -0.0664 0.0891 0.624 DC L1
ENSG00000168528 SERINC2 -541811 sc-eQTL 5.15e-01 0.0591 0.0906 0.624 DC L1
ENSG00000284543 LINC01226 -638472 sc-eQTL 1.34e-01 0.0898 0.0597 0.624 DC L1
ENSG00000287510 AL137857.1 136061 sc-eQTL 7.78e-01 -0.0246 0.087 0.624 DC L1
ENSG00000060688 SNRNP40 -429034 sc-eQTL 7.08e-01 0.0239 0.0638 0.624 Mono L1
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 4.66e-01 0.0577 0.079 0.624 Mono L1
ENSG00000134644 PUM1 -198237 sc-eQTL 3.21e-01 0.0503 0.0506 0.624 Mono L1
ENSG00000162511 LAPTM5 109980 sc-eQTL 9.24e-01 -0.00445 0.0466 0.624 Mono L1
ENSG00000162512 SDC3 -41004 sc-eQTL 1.87e-01 -0.118 0.0893 0.624 Mono L1
ENSG00000162517 PEF1 -777142 sc-eQTL 9.16e-01 -0.00665 0.0629 0.624 Mono L1
ENSG00000168528 SERINC2 -541811 sc-eQTL 1.90e-01 0.126 0.0958 0.624 Mono L1
ENSG00000284543 LINC01226 -638472 sc-eQTL 3.79e-01 0.0746 0.0846 0.624 Mono L1
ENSG00000287510 AL137857.1 136061 sc-eQTL 7.81e-01 0.0206 0.074 0.624 Mono L1
ENSG00000060688 SNRNP40 -429034 sc-eQTL 2.87e-01 0.0958 0.0899 0.624 NK L1
ENSG00000121753 ADGRB2 -897139 sc-eQTL 6.23e-01 0.0381 0.0775 0.624 NK L1
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 1.45e-01 -0.0897 0.0614 0.624 NK L1
ENSG00000134644 PUM1 -198237 sc-eQTL 7.64e-01 -0.0194 0.0647 0.624 NK L1
ENSG00000162511 LAPTM5 109980 sc-eQTL 7.57e-01 0.0231 0.0744 0.624 NK L1
ENSG00000162517 PEF1 -777142 sc-eQTL 3.21e-01 0.0539 0.0542 0.624 NK L1
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 5.11e-01 0.055 0.0836 0.624 NK L1
ENSG00000287510 AL137857.1 136061 sc-eQTL 6.52e-02 0.142 0.0766 0.624 NK L1
ENSG00000060688 SNRNP40 -429034 sc-eQTL 7.92e-01 -0.0177 0.067 0.624 Other_T L1
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 5.88e-02 -0.135 0.071 0.624 Other_T L1
ENSG00000134644 PUM1 -198237 sc-eQTL 2.56e-01 0.0731 0.0642 0.624 Other_T L1
ENSG00000162511 LAPTM5 109980 sc-eQTL 7.54e-01 -0.0165 0.0528 0.624 Other_T L1
ENSG00000162517 PEF1 -777142 sc-eQTL 6.30e-01 -0.034 0.0705 0.624 Other_T L1
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 8.88e-01 0.0122 0.0864 0.624 Other_T L1
ENSG00000287510 AL137857.1 136061 sc-eQTL 2.73e-01 -0.0986 0.0898 0.624 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -429034 sc-eQTL 3.85e-01 0.0931 0.107 0.612 B_Activated L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 7.88e-01 0.029 0.108 0.612 B_Activated L2
ENSG00000134644 PUM1 -198237 sc-eQTL 1.75e-01 -0.136 0.0998 0.612 B_Activated L2
ENSG00000162510 MATN1 144169 sc-eQTL 6.62e-01 -0.0384 0.0877 0.612 B_Activated L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 8.00e-01 -0.0155 0.0612 0.612 B_Activated L2
ENSG00000162517 PEF1 -777142 sc-eQTL 3.82e-01 -0.091 0.104 0.612 B_Activated L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 4.63e-01 -0.0725 0.0986 0.612 B_Activated L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 1.10e-01 -0.139 0.0867 0.612 B_Activated L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 1.77e-01 0.135 0.0998 0.624 B_Intermediate L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 7.41e-01 -0.0276 0.0835 0.624 B_Intermediate L2
ENSG00000134644 PUM1 -198237 sc-eQTL 6.97e-01 -0.0307 0.0787 0.624 B_Intermediate L2
ENSG00000162510 MATN1 144169 sc-eQTL 9.44e-01 -0.0058 0.082 0.624 B_Intermediate L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 2.75e-01 -0.0549 0.0502 0.624 B_Intermediate L2
ENSG00000162517 PEF1 -777142 sc-eQTL 7.65e-01 0.028 0.0934 0.624 B_Intermediate L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 7.31e-01 -0.0243 0.0706 0.624 B_Intermediate L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 1.61e-01 0.111 0.0787 0.624 B_Intermediate L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 3.37e-01 -0.0932 0.0968 0.623 B_Memory L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 6.44e-01 0.0414 0.0893 0.623 B_Memory L2
ENSG00000134644 PUM1 -198237 sc-eQTL 6.03e-01 -0.0405 0.0778 0.623 B_Memory L2
ENSG00000162510 MATN1 144169 sc-eQTL 7.74e-01 0.0214 0.0744 0.623 B_Memory L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 2.88e-02 -0.144 0.0652 0.623 B_Memory L2
ENSG00000162517 PEF1 -777142 sc-eQTL 3.11e-01 0.0893 0.0879 0.623 B_Memory L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 9.77e-01 -0.00217 0.0755 0.623 B_Memory L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 2.83e-01 0.095 0.0882 0.623 B_Memory L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 2.64e-01 0.0998 0.0892 0.624 B_Naive1 L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 9.77e-01 -0.00222 0.0773 0.624 B_Naive1 L2
ENSG00000134644 PUM1 -198237 sc-eQTL 9.13e-01 -0.00744 0.0681 0.624 B_Naive1 L2
ENSG00000162510 MATN1 144169 sc-eQTL 5.78e-02 0.131 0.0686 0.624 B_Naive1 L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 2.45e-01 -0.0537 0.046 0.624 B_Naive1 L2
ENSG00000162517 PEF1 -777142 sc-eQTL 4.39e-01 0.0631 0.0813 0.624 B_Naive1 L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 7.46e-01 -0.0196 0.0607 0.624 B_Naive1 L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 8.40e-01 0.0151 0.0749 0.624 B_Naive1 L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 7.10e-01 -0.0356 0.0958 0.624 B_Naive2 L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 9.04e-01 0.00954 0.0791 0.624 B_Naive2 L2
ENSG00000134644 PUM1 -198237 sc-eQTL 8.49e-01 -0.0147 0.0774 0.624 B_Naive2 L2
ENSG00000162510 MATN1 144169 sc-eQTL 8.74e-01 0.0118 0.0743 0.624 B_Naive2 L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 1.30e-01 -0.0764 0.0502 0.624 B_Naive2 L2
ENSG00000162517 PEF1 -777142 sc-eQTL 4.90e-01 -0.0634 0.0917 0.624 B_Naive2 L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 8.28e-01 -0.016 0.0735 0.624 B_Naive2 L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 3.61e-01 0.0725 0.0792 0.624 B_Naive2 L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 1.94e-01 -0.124 0.0948 0.618 CD4_CTL L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 1.99e-01 -0.12 0.0932 0.618 CD4_CTL L2
ENSG00000134644 PUM1 -198237 sc-eQTL 4.52e-01 0.0691 0.0917 0.618 CD4_CTL L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 9.10e-01 0.00923 0.0819 0.618 CD4_CTL L2
ENSG00000162517 PEF1 -777142 sc-eQTL 2.89e-01 -0.089 0.0837 0.618 CD4_CTL L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 4.09e-01 -0.0739 0.0894 0.618 CD4_CTL L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 4.01e-01 0.0664 0.0789 0.618 CD4_CTL L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 5.85e-02 -0.14 0.0736 0.624 CD4_Naive L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 2.55e-01 0.0748 0.0656 0.624 CD4_Naive L2
ENSG00000134644 PUM1 -198237 sc-eQTL 6.77e-01 -0.0219 0.0525 0.624 CD4_Naive L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 4.18e-01 0.0456 0.0562 0.624 CD4_Naive L2
ENSG00000162517 PEF1 -777142 sc-eQTL 1.42e-01 -0.0904 0.0614 0.624 CD4_Naive L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 6.40e-01 -0.0268 0.0571 0.624 CD4_Naive L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 9.56e-01 -0.00363 0.0656 0.624 CD4_Naive L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 1.76e-01 0.127 0.0939 0.624 CD4_TCM L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 8.35e-01 -0.0158 0.076 0.624 CD4_TCM L2
ENSG00000134644 PUM1 -198237 sc-eQTL 4.32e-02 0.136 0.0666 0.624 CD4_TCM L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 7.74e-01 0.016 0.0558 0.624 CD4_TCM L2
ENSG00000162517 PEF1 -777142 sc-eQTL 8.77e-01 0.0116 0.0748 0.624 CD4_TCM L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 9.15e-01 -0.00761 0.0708 0.624 CD4_TCM L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 5.43e-01 0.048 0.0788 0.624 CD4_TCM L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 6.02e-01 0.0491 0.0941 0.624 CD4_TEM L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 1.73e-01 -0.122 0.0893 0.624 CD4_TEM L2
ENSG00000134644 PUM1 -198237 sc-eQTL 2.54e-01 0.0851 0.0745 0.624 CD4_TEM L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 5.81e-01 0.0417 0.0755 0.624 CD4_TEM L2
ENSG00000162517 PEF1 -777142 sc-eQTL 4.47e-01 -0.0645 0.0846 0.624 CD4_TEM L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 5.10e-01 0.0584 0.0883 0.624 CD4_TEM L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 6.87e-02 0.158 0.0865 0.624 CD4_TEM L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 7.13e-01 0.0372 0.101 0.624 CD8_CTL L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 2.64e-01 0.0866 0.0773 0.624 CD8_CTL L2
ENSG00000134644 PUM1 -198237 sc-eQTL 2.00e-01 -0.0963 0.075 0.624 CD8_CTL L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 8.47e-01 0.0161 0.0834 0.624 CD8_CTL L2
ENSG00000162517 PEF1 -777142 sc-eQTL 1.17e-01 -0.113 0.0722 0.624 CD8_CTL L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 6.02e-01 0.0457 0.0876 0.624 CD8_CTL L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 2.67e-01 0.0915 0.0822 0.624 CD8_CTL L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 5.71e-01 0.053 0.0933 0.624 CD8_Naive L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 3.52e-01 0.0749 0.0803 0.624 CD8_Naive L2
ENSG00000134644 PUM1 -198237 sc-eQTL 4.13e-02 -0.132 0.0642 0.624 CD8_Naive L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 7.86e-01 0.0169 0.0621 0.624 CD8_Naive L2
ENSG00000162517 PEF1 -777142 sc-eQTL 5.81e-01 0.0477 0.0863 0.624 CD8_Naive L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 3.76e-01 0.0687 0.0774 0.624 CD8_Naive L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 4.14e-01 0.069 0.0842 0.624 CD8_Naive L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 9.37e-01 -0.00829 0.104 0.634 CD8_TCM L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 9.49e-01 -0.00612 0.0958 0.634 CD8_TCM L2
ENSG00000134644 PUM1 -198237 sc-eQTL 5.46e-01 0.0544 0.0899 0.634 CD8_TCM L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 1.07e-01 0.152 0.0936 0.634 CD8_TCM L2
ENSG00000162517 PEF1 -777142 sc-eQTL 1.83e-01 -0.128 0.0959 0.634 CD8_TCM L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 5.26e-01 0.0554 0.0871 0.634 CD8_TCM L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 7.52e-01 0.0279 0.0881 0.634 CD8_TCM L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 2.65e-01 -0.108 0.097 0.621 CD8_TEM L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 5.47e-01 -0.0562 0.0932 0.621 CD8_TEM L2
ENSG00000134644 PUM1 -198237 sc-eQTL 9.34e-01 0.00794 0.0954 0.621 CD8_TEM L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 8.04e-01 0.0222 0.0897 0.621 CD8_TEM L2
ENSG00000162517 PEF1 -777142 sc-eQTL 7.56e-01 0.0263 0.0844 0.621 CD8_TEM L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 6.13e-01 0.0471 0.093 0.621 CD8_TEM L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 5.02e-01 -0.0566 0.0842 0.621 CD8_TEM L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 8.26e-01 -0.0218 0.0993 0.621 MAIT L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 5.57e-01 -0.0518 0.0879 0.621 MAIT L2
ENSG00000134644 PUM1 -198237 sc-eQTL 5.92e-01 0.0453 0.0843 0.621 MAIT L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 8.06e-01 0.0195 0.0796 0.621 MAIT L2
ENSG00000162517 PEF1 -777142 sc-eQTL 8.51e-01 0.0165 0.0874 0.621 MAIT L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 6.07e-02 0.166 0.0879 0.621 MAIT L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 2.47e-01 -0.106 0.091 0.621 MAIT L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 8.80e-01 0.0153 0.101 0.622 NK_CD56bright L2
ENSG00000121753 ADGRB2 -897139 sc-eQTL 1.56e-01 -0.112 0.079 0.622 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 1.48e-01 -0.124 0.0853 0.622 NK_CD56bright L2
ENSG00000134644 PUM1 -198237 sc-eQTL 9.47e-02 0.15 0.0894 0.622 NK_CD56bright L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 3.98e-01 -0.0751 0.0886 0.622 NK_CD56bright L2
ENSG00000162517 PEF1 -777142 sc-eQTL 6.71e-01 0.0367 0.0862 0.622 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 5.73e-01 -0.0503 0.0892 0.622 NK_CD56bright L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 2.87e-01 -0.0936 0.0877 0.622 NK_CD56bright L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 4.69e-01 0.0688 0.0948 0.625 NK_CD56dim L2
ENSG00000121753 ADGRB2 -897139 sc-eQTL 4.34e-01 0.0653 0.0834 0.625 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 3.34e-01 -0.0678 0.0701 0.625 NK_CD56dim L2
ENSG00000134644 PUM1 -198237 sc-eQTL 3.53e-01 0.0669 0.0719 0.625 NK_CD56dim L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 9.04e-01 0.00923 0.0768 0.625 NK_CD56dim L2
ENSG00000162517 PEF1 -777142 sc-eQTL 1.72e-01 0.0932 0.068 0.625 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 3.12e-01 0.0973 0.096 0.625 NK_CD56dim L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 6.67e-02 0.145 0.0788 0.625 NK_CD56dim L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 9.04e-01 0.0121 0.1 0.612 NK_HLA L2
ENSG00000121753 ADGRB2 -897139 sc-eQTL 2.82e-01 0.0857 0.0794 0.612 NK_HLA L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 5.62e-01 0.052 0.0895 0.612 NK_HLA L2
ENSG00000134644 PUM1 -198237 sc-eQTL 7.14e-01 -0.032 0.0873 0.612 NK_HLA L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 9.81e-01 -0.00197 0.0833 0.612 NK_HLA L2
ENSG00000162517 PEF1 -777142 sc-eQTL 2.41e-01 -0.11 0.0935 0.612 NK_HLA L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 2.37e-01 0.105 0.0883 0.612 NK_HLA L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 2.20e-03 0.26 0.0837 0.612 NK_HLA L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 4.62e-01 0.0684 0.0927 0.625 NK_cytokine L2
ENSG00000121753 ADGRB2 -897139 sc-eQTL 8.81e-01 0.0126 0.0838 0.625 NK_cytokine L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 4.56e-01 -0.054 0.0724 0.625 NK_cytokine L2
ENSG00000134644 PUM1 -198237 sc-eQTL 8.34e-02 -0.135 0.0778 0.625 NK_cytokine L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 8.99e-01 0.011 0.0862 0.625 NK_cytokine L2
ENSG00000162517 PEF1 -777142 sc-eQTL 7.20e-01 -0.0263 0.0735 0.625 NK_cytokine L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 8.95e-01 -0.0121 0.0914 0.625 NK_cytokine L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 1.29e-01 0.129 0.0846 0.625 NK_cytokine L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 9.75e-01 -0.00364 0.115 0.644 PB L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 5.74e-01 -0.0752 0.133 0.644 PB L2
ENSG00000134644 PUM1 -198237 sc-eQTL 5.32e-01 -0.0725 0.116 0.644 PB L2
ENSG00000162510 MATN1 144169 sc-eQTL 8.55e-01 0.0198 0.108 0.644 PB L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 7.89e-01 -0.0207 0.0772 0.644 PB L2
ENSG00000162517 PEF1 -777142 sc-eQTL 7.89e-01 0.0319 0.119 0.644 PB L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 5.82e-01 0.0582 0.105 0.644 PB L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 6.40e-01 -0.0527 0.112 0.644 PB L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 8.49e-01 -0.0137 0.0715 0.622 Pro_T L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 2.13e-03 -0.276 0.0887 0.622 Pro_T L2
ENSG00000134644 PUM1 -198237 sc-eQTL 2.92e-01 0.0892 0.0844 0.622 Pro_T L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 7.30e-01 -0.021 0.0607 0.622 Pro_T L2
ENSG00000162517 PEF1 -777142 sc-eQTL 2.03e-01 -0.113 0.0888 0.622 Pro_T L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 8.72e-02 -0.145 0.0843 0.622 Pro_T L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 2.31e-01 -0.0935 0.0778 0.622 Pro_T L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 6.09e-01 0.0491 0.0957 0.624 Treg L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 2.17e-01 -0.114 0.0923 0.624 Treg L2
ENSG00000134644 PUM1 -198237 sc-eQTL 7.91e-01 -0.0196 0.0741 0.624 Treg L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 9.69e-01 -0.00331 0.0849 0.624 Treg L2
ENSG00000162517 PEF1 -777142 sc-eQTL 8.30e-01 0.0197 0.0917 0.624 Treg L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 3.27e-01 0.0849 0.0863 0.624 Treg L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 2.95e-01 -0.0904 0.0862 0.624 Treg L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 4.26e-01 -0.0791 0.0991 0.632 cDC L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 6.81e-01 0.0442 0.107 0.632 cDC L2
ENSG00000134644 PUM1 -198237 sc-eQTL 1.08e-01 0.148 0.0917 0.632 cDC L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 5.69e-01 0.0369 0.0647 0.632 cDC L2
ENSG00000162517 PEF1 -777142 sc-eQTL 6.93e-01 -0.0371 0.0937 0.632 cDC L2
ENSG00000168528 SERINC2 -541811 sc-eQTL 5.94e-01 0.0443 0.083 0.632 cDC L2
ENSG00000284543 LINC01226 -638472 sc-eQTL 6.19e-01 0.0406 0.0816 0.632 cDC L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 4.93e-01 0.0603 0.0878 0.632 cDC L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 3.14e-01 0.0772 0.0764 0.624 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 7.75e-01 -0.0244 0.0854 0.624 cMono_IL1B L2
ENSG00000134644 PUM1 -198237 sc-eQTL 5.06e-02 0.113 0.0573 0.624 cMono_IL1B L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 8.78e-01 -0.0078 0.0507 0.624 cMono_IL1B L2
ENSG00000162512 SDC3 -41004 sc-eQTL 2.21e-01 -0.117 0.0953 0.624 cMono_IL1B L2
ENSG00000162517 PEF1 -777142 sc-eQTL 8.06e-01 0.0193 0.0781 0.624 cMono_IL1B L2
ENSG00000168528 SERINC2 -541811 sc-eQTL 1.10e-01 0.154 0.0962 0.624 cMono_IL1B L2
ENSG00000284543 LINC01226 -638472 sc-eQTL 5.05e-01 0.057 0.0855 0.624 cMono_IL1B L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 5.50e-02 0.153 0.0791 0.624 cMono_IL1B L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 8.88e-01 0.0114 0.0804 0.624 cMono_S100A L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 4.32e-01 0.0747 0.0948 0.624 cMono_S100A L2
ENSG00000134644 PUM1 -198237 sc-eQTL 2.03e-01 0.0874 0.0684 0.624 cMono_S100A L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 6.63e-01 -0.023 0.0527 0.624 cMono_S100A L2
ENSG00000162512 SDC3 -41004 sc-eQTL 7.33e-01 -0.0312 0.0911 0.624 cMono_S100A L2
ENSG00000162517 PEF1 -777142 sc-eQTL 3.15e-01 -0.0826 0.0821 0.624 cMono_S100A L2
ENSG00000168528 SERINC2 -541811 sc-eQTL 1.69e-01 0.133 0.0961 0.624 cMono_S100A L2
ENSG00000284543 LINC01226 -638472 sc-eQTL 8.15e-01 0.0184 0.0784 0.624 cMono_S100A L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 5.62e-01 -0.0456 0.0787 0.624 cMono_S100A L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 3.70e-01 -0.108 0.12 0.642 gdT L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 8.99e-01 0.0132 0.103 0.642 gdT L2
ENSG00000134644 PUM1 -198237 sc-eQTL 9.49e-01 -0.00681 0.107 0.642 gdT L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 9.10e-01 -0.0132 0.116 0.642 gdT L2
ENSG00000162517 PEF1 -777142 sc-eQTL 2.62e-01 0.119 0.106 0.642 gdT L2
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 2.30e-01 -0.128 0.106 0.642 gdT L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 9.71e-01 -0.00376 0.104 0.642 gdT L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 4.82e-01 0.0642 0.0913 0.631 intMono L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 1.17e-01 0.154 0.0976 0.631 intMono L2
ENSG00000134644 PUM1 -198237 sc-eQTL 2.53e-01 -0.0952 0.0831 0.631 intMono L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 2.91e-01 0.0691 0.0652 0.631 intMono L2
ENSG00000162512 SDC3 -41004 sc-eQTL 4.90e-01 -0.0618 0.0894 0.631 intMono L2
ENSG00000162517 PEF1 -777142 sc-eQTL 2.80e-01 0.101 0.0938 0.631 intMono L2
ENSG00000168528 SERINC2 -541811 sc-eQTL 2.36e-01 0.111 0.0934 0.631 intMono L2
ENSG00000284543 LINC01226 -638472 sc-eQTL 9.54e-01 -0.00517 0.0888 0.631 intMono L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 3.84e-01 0.0774 0.0886 0.631 intMono L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 9.00e-01 -0.0105 0.0838 0.624 ncMono L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 7.45e-01 0.029 0.0893 0.624 ncMono L2
ENSG00000134644 PUM1 -198237 sc-eQTL 2.33e-01 -0.087 0.0727 0.624 ncMono L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 6.27e-01 0.0322 0.0663 0.624 ncMono L2
ENSG00000162512 SDC3 -41004 sc-eQTL 2.39e-01 -0.0874 0.0741 0.624 ncMono L2
ENSG00000162517 PEF1 -777142 sc-eQTL 9.40e-01 0.00647 0.0852 0.624 ncMono L2
ENSG00000168528 SERINC2 -541811 sc-eQTL 4.05e-01 0.0676 0.081 0.624 ncMono L2
ENSG00000284543 LINC01226 -638472 sc-eQTL 1.52e-01 0.116 0.0806 0.624 ncMono L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 1.95e-01 -0.109 0.0837 0.624 ncMono L2
ENSG00000060688 SNRNP40 -429034 sc-eQTL 9.52e-01 -0.00597 0.0996 0.624 pDC L2
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 8.89e-01 -0.0153 0.109 0.624 pDC L2
ENSG00000134644 PUM1 -198237 sc-eQTL 8.96e-01 -0.0119 0.0906 0.624 pDC L2
ENSG00000162511 LAPTM5 109980 sc-eQTL 9.72e-01 0.00294 0.0843 0.624 pDC L2
ENSG00000162517 PEF1 -777142 sc-eQTL 2.70e-01 -0.121 0.109 0.624 pDC L2
ENSG00000168528 SERINC2 -541811 sc-eQTL 6.34e-01 -0.0487 0.102 0.624 pDC L2
ENSG00000284543 LINC01226 -638472 sc-eQTL 7.75e-01 0.0227 0.0793 0.624 pDC L2
ENSG00000287510 AL137857.1 136061 sc-eQTL 9.69e-01 -0.00358 0.0933 0.624 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -429034 sc-eQTL 6.69e-01 0.041 0.0957 0.624 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 8.91e-01 0.0109 0.0797 0.624 B_Memory LOneK1K
ENSG00000134644 PUM1 -198237 sc-eQTL 4.74e-01 -0.0505 0.0705 0.624 B_Memory LOneK1K
ENSG00000162510 MATN1 144169 sc-eQTL 6.49e-01 -0.0366 0.0804 0.624 B_Memory LOneK1K
ENSG00000162511 LAPTM5 109980 sc-eQTL 1.71e-01 -0.0692 0.0503 0.624 B_Memory LOneK1K
ENSG00000162517 PEF1 -777142 sc-eQTL 7.84e-01 0.023 0.0837 0.624 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 6.74e-01 -0.0281 0.0669 0.624 B_Memory LOneK1K
ENSG00000287510 AL137857.1 136061 sc-eQTL 2.40e-01 0.0856 0.0727 0.624 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -429034 sc-eQTL 6.45e-01 0.0402 0.0871 0.624 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 7.04e-01 0.0262 0.0689 0.624 B_Naive LOneK1K
ENSG00000134644 PUM1 -198237 sc-eQTL 6.82e-01 -0.0268 0.0652 0.624 B_Naive LOneK1K
ENSG00000162510 MATN1 144169 sc-eQTL 1.54e-01 0.0894 0.0625 0.624 B_Naive LOneK1K
ENSG00000162511 LAPTM5 109980 sc-eQTL 3.95e-01 -0.0376 0.0441 0.624 B_Naive LOneK1K
ENSG00000162517 PEF1 -777142 sc-eQTL 9.27e-01 0.0074 0.0807 0.624 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 3.73e-01 -0.0509 0.0569 0.624 B_Naive LOneK1K
ENSG00000287510 AL137857.1 136061 sc-eQTL 4.25e-01 0.0541 0.0677 0.624 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -429034 sc-eQTL 3.97e-01 0.0617 0.0727 0.624 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 7.59e-01 0.0253 0.0825 0.624 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -198237 sc-eQTL 7.08e-02 0.0949 0.0522 0.624 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 109980 sc-eQTL 8.94e-01 -0.00616 0.0463 0.624 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -41004 sc-eQTL 2.45e-01 -0.11 0.0941 0.624 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -777142 sc-eQTL 5.37e-01 -0.0411 0.0663 0.624 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -541811 sc-eQTL 1.52e-01 0.139 0.0966 0.624 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -638472 sc-eQTL 3.59e-01 0.073 0.0795 0.624 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 136061 sc-eQTL 2.64e-01 0.0833 0.0743 0.624 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -429034 sc-eQTL 9.42e-01 -0.00577 0.0797 0.625 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 1.02e-01 0.142 0.0867 0.625 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -198237 sc-eQTL 1.20e-01 -0.111 0.071 0.625 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 109980 sc-eQTL 5.16e-01 0.0371 0.0571 0.625 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -41004 sc-eQTL 1.96e-01 -0.108 0.0831 0.625 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -777142 sc-eQTL 5.32e-01 0.0474 0.0758 0.625 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -541811 sc-eQTL 6.25e-01 0.0423 0.0865 0.625 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -638472 sc-eQTL 1.12e-01 0.13 0.0817 0.625 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 136061 sc-eQTL 4.41e-01 -0.0635 0.0822 0.625 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -429034 sc-eQTL 2.77e-01 0.0982 0.0901 0.625 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -897139 sc-eQTL 4.24e-01 0.0616 0.0769 0.625 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -429228 sc-eQTL 4.90e-01 -0.0427 0.0617 0.625 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -198237 sc-eQTL 7.12e-01 -0.025 0.0676 0.625 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 109980 sc-eQTL 8.34e-01 0.0159 0.0756 0.625 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -777142 sc-eQTL 5.65e-01 0.0331 0.0574 0.625 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 149250 sc-eQTL 2.90e-01 0.0922 0.087 0.625 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 136061 sc-eQTL 3.76e-02 0.156 0.0745 0.625 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -429228 eQTL 2.20e-02 0.0405 0.0176 0.0 0.0 0.403

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 \N 149250 5.66e-06 7.87e-06 7.29e-07 3.48e-06 1.66e-06 1.55e-06 7.88e-06 1.1e-06 4.7e-06 2.9e-06 8.15e-06 2.94e-06 1.01e-05 2.24e-06 1.04e-06 4.09e-06 2.96e-06 3.94e-06 1.49e-06 1.39e-06 2.79e-06 5.63e-06 4.69e-06 1.68e-06 9e-06 2.01e-06 2.28e-06 1.71e-06 4.92e-06 5.51e-06 3.32e-06 4.59e-07 5.21e-07 1.64e-06 2.06e-06 9.71e-07 1.07e-06 4.39e-07 8.54e-07 7.42e-07 5.18e-07 8.39e-06 6.47e-07 1.65e-07 4.86e-07 1.34e-06 1.06e-06 4.4e-07 2.72e-07