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Genes within 1Mb (chr1:30861770:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -435018 sc-eQTL 3.75e-01 0.0734 0.0826 0.585 B L1
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 7.91e-01 -0.0176 0.0663 0.585 B L1
ENSG00000134644 PUM1 -204221 sc-eQTL 3.44e-02 -0.117 0.055 0.585 B L1
ENSG00000162510 MATN1 138185 sc-eQTL 9.38e-01 -0.00454 0.0585 0.585 B L1
ENSG00000162511 LAPTM5 103996 sc-eQTL 8.88e-01 0.00644 0.0458 0.585 B L1
ENSG00000162517 PEF1 -783126 sc-eQTL 2.05e-01 -0.0875 0.0689 0.585 B L1
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 4.41e-01 0.0414 0.0536 0.585 B L1
ENSG00000287510 AL137857.1 130077 sc-eQTL 3.75e-01 0.0563 0.0634 0.585 B L1
ENSG00000060688 SNRNP40 -435018 sc-eQTL 7.14e-01 0.0264 0.072 0.585 CD4T L1
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 8.56e-01 0.0102 0.0563 0.585 CD4T L1
ENSG00000134644 PUM1 -204221 sc-eQTL 3.37e-01 -0.0481 0.05 0.585 CD4T L1
ENSG00000162511 LAPTM5 103996 sc-eQTL 4.04e-01 0.0463 0.0554 0.585 CD4T L1
ENSG00000162517 PEF1 -783126 sc-eQTL 1.69e-01 -0.0798 0.0578 0.585 CD4T L1
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 5.87e-01 0.027 0.0496 0.585 CD4T L1
ENSG00000287510 AL137857.1 130077 sc-eQTL 5.15e-01 0.0387 0.0594 0.585 CD4T L1
ENSG00000060688 SNRNP40 -435018 sc-eQTL 5.87e-01 0.0516 0.0948 0.585 CD8T L1
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 2.63e-01 0.0707 0.0629 0.585 CD8T L1
ENSG00000134644 PUM1 -204221 sc-eQTL 1.25e-02 -0.138 0.0548 0.585 CD8T L1
ENSG00000162511 LAPTM5 103996 sc-eQTL 1.27e-01 0.0822 0.0537 0.585 CD8T L1
ENSG00000162517 PEF1 -783126 sc-eQTL 9.38e-01 -0.00519 0.0665 0.585 CD8T L1
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 4.03e-02 0.129 0.0626 0.585 CD8T L1
ENSG00000287510 AL137857.1 130077 sc-eQTL 7.60e-01 0.0243 0.0795 0.585 CD8T L1
ENSG00000060688 SNRNP40 -435018 sc-eQTL 5.52e-01 -0.0503 0.0845 0.583 DC L1
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 3.12e-01 -0.101 0.0998 0.583 DC L1
ENSG00000134644 PUM1 -204221 sc-eQTL 6.53e-01 -0.0353 0.0784 0.583 DC L1
ENSG00000162511 LAPTM5 103996 sc-eQTL 1.97e-01 0.0723 0.0558 0.583 DC L1
ENSG00000162517 PEF1 -783126 sc-eQTL 8.35e-01 0.019 0.0908 0.583 DC L1
ENSG00000168528 SERINC2 -547795 sc-eQTL 8.60e-01 -0.0164 0.0923 0.583 DC L1
ENSG00000284543 LINC01226 -644456 sc-eQTL 2.60e-01 0.0688 0.061 0.583 DC L1
ENSG00000287510 AL137857.1 130077 sc-eQTL 3.42e-01 0.0842 0.0884 0.583 DC L1
ENSG00000060688 SNRNP40 -435018 sc-eQTL 7.33e-01 0.022 0.0645 0.585 Mono L1
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 5.04e-01 0.0535 0.0799 0.585 Mono L1
ENSG00000134644 PUM1 -204221 sc-eQTL 2.37e-01 0.0606 0.0511 0.585 Mono L1
ENSG00000162511 LAPTM5 103996 sc-eQTL 6.72e-01 0.02 0.0472 0.585 Mono L1
ENSG00000162512 SDC3 -46988 sc-eQTL 3.05e-02 -0.195 0.0897 0.585 Mono L1
ENSG00000162517 PEF1 -783126 sc-eQTL 9.76e-01 0.00195 0.0636 0.585 Mono L1
ENSG00000168528 SERINC2 -547795 sc-eQTL 1.71e-01 0.133 0.0969 0.585 Mono L1
ENSG00000284543 LINC01226 -644456 sc-eQTL 8.66e-01 -0.0145 0.0857 0.585 Mono L1
ENSG00000287510 AL137857.1 130077 sc-eQTL 7.86e-01 0.0203 0.0749 0.585 Mono L1
ENSG00000060688 SNRNP40 -435018 sc-eQTL 2.36e-01 0.107 0.0905 0.586 NK L1
ENSG00000121753 ADGRB2 -903123 sc-eQTL 2.64e-01 0.0873 0.078 0.586 NK L1
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 1.85e-01 -0.0824 0.0619 0.586 NK L1
ENSG00000134644 PUM1 -204221 sc-eQTL 4.36e-02 -0.131 0.0646 0.586 NK L1
ENSG00000162511 LAPTM5 103996 sc-eQTL 2.24e-01 0.0911 0.0748 0.586 NK L1
ENSG00000162517 PEF1 -783126 sc-eQTL 1.27e-01 0.0835 0.0545 0.586 NK L1
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 5.28e-01 0.0532 0.0843 0.586 NK L1
ENSG00000287510 AL137857.1 130077 sc-eQTL 3.74e-02 0.162 0.0771 0.586 NK L1
ENSG00000060688 SNRNP40 -435018 sc-eQTL 6.59e-01 -0.0301 0.0681 0.585 Other_T L1
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 1.30e-01 -0.11 0.0724 0.585 Other_T L1
ENSG00000134644 PUM1 -204221 sc-eQTL 4.82e-01 -0.046 0.0654 0.585 Other_T L1
ENSG00000162511 LAPTM5 103996 sc-eQTL 8.29e-01 -0.0116 0.0537 0.585 Other_T L1
ENSG00000162517 PEF1 -783126 sc-eQTL 7.57e-01 0.0222 0.0717 0.585 Other_T L1
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 9.46e-02 0.147 0.0873 0.585 Other_T L1
ENSG00000287510 AL137857.1 130077 sc-eQTL 2.01e-01 -0.117 0.0912 0.585 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -435018 sc-eQTL 7.69e-01 0.0328 0.112 0.577 B_Activated L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 3.56e-01 0.104 0.112 0.577 B_Activated L2
ENSG00000134644 PUM1 -204221 sc-eQTL 1.05e-02 -0.266 0.103 0.577 B_Activated L2
ENSG00000162510 MATN1 138185 sc-eQTL 7.92e-01 -0.0241 0.0914 0.577 B_Activated L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 8.31e-01 -0.0136 0.0637 0.577 B_Activated L2
ENSG00000162517 PEF1 -783126 sc-eQTL 3.87e-01 -0.094 0.108 0.577 B_Activated L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 9.87e-01 -0.00164 0.103 0.577 B_Activated L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 5.31e-01 -0.0571 0.091 0.577 B_Activated L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 8.47e-01 -0.0196 0.101 0.586 B_Intermediate L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 3.57e-01 -0.078 0.0844 0.586 B_Intermediate L2
ENSG00000134644 PUM1 -204221 sc-eQTL 6.55e-01 -0.0357 0.0798 0.586 B_Intermediate L2
ENSG00000162510 MATN1 138185 sc-eQTL 8.65e-01 -0.0142 0.083 0.586 B_Intermediate L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 6.83e-01 -0.0208 0.051 0.586 B_Intermediate L2
ENSG00000162517 PEF1 -783126 sc-eQTL 7.87e-01 -0.0256 0.0946 0.586 B_Intermediate L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 9.63e-01 0.00331 0.0715 0.586 B_Intermediate L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 5.67e-02 0.152 0.0794 0.586 B_Intermediate L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 8.50e-01 -0.0189 0.1 0.584 B_Memory L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 7.05e-01 0.035 0.0923 0.584 B_Memory L2
ENSG00000134644 PUM1 -204221 sc-eQTL 6.42e-01 -0.0374 0.0803 0.584 B_Memory L2
ENSG00000162510 MATN1 138185 sc-eQTL 8.91e-01 -0.0105 0.0769 0.584 B_Memory L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 7.86e-01 -0.0185 0.0681 0.584 B_Memory L2
ENSG00000162517 PEF1 -783126 sc-eQTL 7.39e-01 0.0303 0.091 0.584 B_Memory L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 6.78e-01 0.0324 0.0779 0.584 B_Memory L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 8.79e-01 0.0139 0.0913 0.584 B_Memory L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 1.02e-01 0.148 0.0901 0.585 B_Naive1 L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 8.02e-01 0.0196 0.0783 0.585 B_Naive1 L2
ENSG00000134644 PUM1 -204221 sc-eQTL 1.33e-01 -0.104 0.0687 0.585 B_Naive1 L2
ENSG00000162510 MATN1 138185 sc-eQTL 5.40e-01 0.043 0.07 0.585 B_Naive1 L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 7.90e-01 0.0125 0.0468 0.585 B_Naive1 L2
ENSG00000162517 PEF1 -783126 sc-eQTL 2.93e-01 0.0869 0.0823 0.585 B_Naive1 L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 4.31e-01 0.0484 0.0614 0.585 B_Naive1 L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 8.39e-01 -0.0155 0.076 0.585 B_Naive1 L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 9.82e-01 0.00225 0.0971 0.586 B_Naive2 L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 6.09e-01 -0.041 0.0801 0.586 B_Naive2 L2
ENSG00000134644 PUM1 -204221 sc-eQTL 8.05e-01 -0.0193 0.0784 0.586 B_Naive2 L2
ENSG00000162510 MATN1 138185 sc-eQTL 8.76e-01 -0.0117 0.0753 0.586 B_Naive2 L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 9.60e-01 -0.0026 0.0511 0.586 B_Naive2 L2
ENSG00000162517 PEF1 -783126 sc-eQTL 1.53e-01 -0.133 0.0926 0.586 B_Naive2 L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 6.47e-01 0.0341 0.0744 0.586 B_Naive2 L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 5.68e-01 0.046 0.0804 0.586 B_Naive2 L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 5.87e-01 -0.0517 0.095 0.584 CD4_CTL L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 7.09e-02 -0.168 0.0928 0.584 CD4_CTL L2
ENSG00000134644 PUM1 -204221 sc-eQTL 5.91e-01 0.0494 0.0917 0.584 CD4_CTL L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 1.70e-01 0.112 0.0814 0.584 CD4_CTL L2
ENSG00000162517 PEF1 -783126 sc-eQTL 4.85e-01 -0.0585 0.0837 0.584 CD4_CTL L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 7.88e-01 -0.024 0.0894 0.584 CD4_CTL L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 2.15e-01 0.0978 0.0786 0.584 CD4_CTL L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 4.65e-01 -0.055 0.0752 0.585 CD4_Naive L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 4.47e-01 0.0508 0.0667 0.585 CD4_Naive L2
ENSG00000134644 PUM1 -204221 sc-eQTL 6.45e-02 -0.0983 0.0529 0.585 CD4_Naive L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 5.43e-01 0.0348 0.0571 0.585 CD4_Naive L2
ENSG00000162517 PEF1 -783126 sc-eQTL 2.45e-01 -0.0728 0.0625 0.585 CD4_Naive L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 9.57e-01 -0.00314 0.058 0.585 CD4_Naive L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 8.22e-01 0.015 0.0666 0.585 CD4_Naive L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 3.11e-01 0.0956 0.0942 0.585 CD4_TCM L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 6.80e-01 -0.0315 0.0761 0.585 CD4_TCM L2
ENSG00000134644 PUM1 -204221 sc-eQTL 1.05e-01 0.109 0.067 0.585 CD4_TCM L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 9.07e-01 0.00651 0.0559 0.585 CD4_TCM L2
ENSG00000162517 PEF1 -783126 sc-eQTL 7.67e-01 0.0223 0.075 0.585 CD4_TCM L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 4.17e-01 0.0576 0.0709 0.585 CD4_TCM L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 2.58e-01 0.0893 0.0788 0.585 CD4_TCM L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 6.82e-01 0.0386 0.0943 0.585 CD4_TEM L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 2.26e-01 -0.109 0.0896 0.585 CD4_TEM L2
ENSG00000134644 PUM1 -204221 sc-eQTL 8.19e-01 0.0171 0.0749 0.585 CD4_TEM L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 3.90e-01 0.0651 0.0756 0.585 CD4_TEM L2
ENSG00000162517 PEF1 -783126 sc-eQTL 8.70e-01 -0.0139 0.0848 0.585 CD4_TEM L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 7.67e-01 0.0262 0.0886 0.585 CD4_TEM L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 9.90e-01 -0.00106 0.0873 0.585 CD4_TEM L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 6.52e-01 0.0465 0.103 0.585 CD8_CTL L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 3.72e-01 0.0704 0.0787 0.585 CD8_CTL L2
ENSG00000134644 PUM1 -204221 sc-eQTL 4.36e-01 -0.0596 0.0764 0.585 CD8_CTL L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 2.33e-01 0.101 0.0845 0.585 CD8_CTL L2
ENSG00000162517 PEF1 -783126 sc-eQTL 3.73e-01 -0.0658 0.0737 0.585 CD8_CTL L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 1.47e-01 0.129 0.0887 0.585 CD8_CTL L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 7.09e-01 0.0313 0.0838 0.585 CD8_CTL L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 4.68e-01 0.0685 0.0942 0.585 CD8_Naive L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 6.55e-01 0.0363 0.0813 0.585 CD8_Naive L2
ENSG00000134644 PUM1 -204221 sc-eQTL 3.74e-02 -0.136 0.0648 0.585 CD8_Naive L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 7.87e-01 -0.017 0.0627 0.585 CD8_Naive L2
ENSG00000162517 PEF1 -783126 sc-eQTL 5.84e-01 0.0478 0.0871 0.585 CD8_Naive L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 3.50e-01 0.0733 0.0781 0.585 CD8_Naive L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 3.01e-01 0.0882 0.085 0.585 CD8_Naive L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 5.31e-01 0.0655 0.104 0.595 CD8_TCM L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 7.43e-01 0.0315 0.0958 0.595 CD8_TCM L2
ENSG00000134644 PUM1 -204221 sc-eQTL 5.65e-01 0.0518 0.09 0.595 CD8_TCM L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 1.61e-01 0.132 0.0938 0.595 CD8_TCM L2
ENSG00000162517 PEF1 -783126 sc-eQTL 9.79e-01 -0.00252 0.0964 0.595 CD8_TCM L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 9.08e-01 0.0101 0.0873 0.595 CD8_TCM L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 7.69e-01 0.0259 0.0882 0.595 CD8_TCM L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 5.67e-01 0.0569 0.0993 0.589 CD8_TEM L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 3.33e-01 -0.0922 0.095 0.589 CD8_TEM L2
ENSG00000134644 PUM1 -204221 sc-eQTL 8.71e-01 0.0158 0.0974 0.589 CD8_TEM L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 8.47e-01 0.0177 0.0916 0.589 CD8_TEM L2
ENSG00000162517 PEF1 -783126 sc-eQTL 9.86e-01 -0.00148 0.0862 0.589 CD8_TEM L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 3.46e-01 0.0895 0.0948 0.589 CD8_TEM L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 2.65e-01 -0.0959 0.0857 0.589 CD8_TEM L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 1.12e-01 -0.158 0.0988 0.584 MAIT L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 4.27e-01 -0.07 0.088 0.584 MAIT L2
ENSG00000134644 PUM1 -204221 sc-eQTL 1.45e-01 -0.123 0.084 0.584 MAIT L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 4.19e-01 0.0644 0.0795 0.584 MAIT L2
ENSG00000162517 PEF1 -783126 sc-eQTL 8.01e-01 0.0221 0.0875 0.584 MAIT L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 8.04e-04 0.294 0.0864 0.584 MAIT L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 2.88e-01 -0.0971 0.0912 0.584 MAIT L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 5.16e-01 0.0658 0.101 0.587 NK_CD56bright L2
ENSG00000121753 ADGRB2 -903123 sc-eQTL 9.32e-01 -0.0068 0.0793 0.587 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 1.20e-01 -0.133 0.0851 0.587 NK_CD56bright L2
ENSG00000134644 PUM1 -204221 sc-eQTL 4.50e-01 0.068 0.0898 0.587 NK_CD56bright L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 8.90e-01 0.0123 0.0887 0.587 NK_CD56bright L2
ENSG00000162517 PEF1 -783126 sc-eQTL 8.49e-02 0.148 0.0855 0.587 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 8.66e-02 -0.152 0.0885 0.587 NK_CD56bright L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 3.27e-01 -0.0861 0.0876 0.587 NK_CD56bright L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 6.44e-01 0.0442 0.0957 0.586 NK_CD56dim L2
ENSG00000121753 ADGRB2 -903123 sc-eQTL 5.85e-01 0.046 0.0842 0.586 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 2.23e-01 -0.0861 0.0705 0.586 NK_CD56dim L2
ENSG00000134644 PUM1 -204221 sc-eQTL 7.64e-01 -0.0218 0.0726 0.586 NK_CD56dim L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 3.94e-01 0.066 0.0773 0.586 NK_CD56dim L2
ENSG00000162517 PEF1 -783126 sc-eQTL 1.14e-01 0.109 0.0685 0.586 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 4.57e-01 0.0722 0.0969 0.586 NK_CD56dim L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 2.34e-02 0.181 0.0791 0.586 NK_CD56dim L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 5.87e-01 0.0552 0.101 0.573 NK_HLA L2
ENSG00000121753 ADGRB2 -903123 sc-eQTL 4.52e-01 0.0606 0.0804 0.573 NK_HLA L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 8.24e-01 0.0202 0.0906 0.573 NK_HLA L2
ENSG00000134644 PUM1 -204221 sc-eQTL 2.37e-01 -0.104 0.0879 0.573 NK_HLA L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 4.44e-01 0.0645 0.0841 0.573 NK_HLA L2
ENSG00000162517 PEF1 -783126 sc-eQTL 2.84e-01 -0.102 0.0946 0.573 NK_HLA L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 1.67e-01 0.124 0.0892 0.573 NK_HLA L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 1.20e-02 0.216 0.0853 0.573 NK_HLA L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 4.85e-01 0.066 0.0942 0.586 NK_cytokine L2
ENSG00000121753 ADGRB2 -903123 sc-eQTL 2.08e-01 0.107 0.0849 0.586 NK_cytokine L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 6.49e-01 -0.0335 0.0736 0.586 NK_cytokine L2
ENSG00000134644 PUM1 -204221 sc-eQTL 2.40e-03 -0.239 0.0778 0.586 NK_cytokine L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 5.84e-01 0.048 0.0876 0.586 NK_cytokine L2
ENSG00000162517 PEF1 -783126 sc-eQTL 7.88e-01 -0.0201 0.0747 0.586 NK_cytokine L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 6.27e-01 0.0452 0.0928 0.586 NK_cytokine L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 2.97e-01 0.0902 0.0862 0.586 NK_cytokine L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 1.51e-01 0.171 0.118 0.593 PB L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 3.52e-01 -0.129 0.138 0.593 PB L2
ENSG00000134644 PUM1 -204221 sc-eQTL 5.31e-01 -0.0754 0.12 0.593 PB L2
ENSG00000162510 MATN1 138185 sc-eQTL 8.01e-01 -0.0283 0.112 0.593 PB L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 9.37e-01 0.00635 0.0801 0.593 PB L2
ENSG00000162517 PEF1 -783126 sc-eQTL 1.33e-01 0.185 0.122 0.593 PB L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 6.45e-01 0.0506 0.109 0.593 PB L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 5.00e-02 -0.227 0.115 0.593 PB L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 4.71e-01 0.0528 0.0731 0.587 Pro_T L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 5.40e-01 -0.057 0.0929 0.587 Pro_T L2
ENSG00000134644 PUM1 -204221 sc-eQTL 8.55e-01 0.0159 0.0867 0.587 Pro_T L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 4.80e-01 -0.044 0.0621 0.587 Pro_T L2
ENSG00000162517 PEF1 -783126 sc-eQTL 2.35e-01 -0.108 0.0909 0.587 Pro_T L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 3.48e-01 -0.0815 0.0867 0.587 Pro_T L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 2.97e-01 -0.0834 0.0797 0.587 Pro_T L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 2.77e-01 0.106 0.0976 0.585 Treg L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 6.86e-01 -0.0383 0.0947 0.585 Treg L2
ENSG00000134644 PUM1 -204221 sc-eQTL 7.16e-01 -0.0276 0.0758 0.585 Treg L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 6.49e-01 0.0395 0.0867 0.585 Treg L2
ENSG00000162517 PEF1 -783126 sc-eQTL 8.84e-01 -0.0136 0.0937 0.585 Treg L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 9.72e-02 0.146 0.0878 0.585 Treg L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 8.82e-01 -0.0131 0.0883 0.585 Treg L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 8.81e-01 0.0147 0.0982 0.583 cDC L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 9.03e-01 0.0129 0.106 0.583 cDC L2
ENSG00000134644 PUM1 -204221 sc-eQTL 4.45e-01 0.0698 0.0912 0.583 cDC L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 4.69e-01 0.0463 0.0639 0.583 cDC L2
ENSG00000162517 PEF1 -783126 sc-eQTL 9.01e-01 -0.0116 0.0927 0.583 cDC L2
ENSG00000168528 SERINC2 -547795 sc-eQTL 5.16e-01 0.0535 0.0821 0.583 cDC L2
ENSG00000284543 LINC01226 -644456 sc-eQTL 8.95e-01 -0.0106 0.0808 0.583 cDC L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 3.74e-01 0.0773 0.0868 0.583 cDC L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 3.95e-01 0.0661 0.0775 0.585 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 9.03e-01 -0.0105 0.0866 0.585 cMono_IL1B L2
ENSG00000134644 PUM1 -204221 sc-eQTL 6.97e-02 0.106 0.0582 0.585 cMono_IL1B L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 4.98e-01 0.0349 0.0514 0.585 cMono_IL1B L2
ENSG00000162512 SDC3 -46988 sc-eQTL 5.97e-02 -0.182 0.0961 0.585 cMono_IL1B L2
ENSG00000162517 PEF1 -783126 sc-eQTL 9.51e-01 -0.00483 0.0792 0.585 cMono_IL1B L2
ENSG00000168528 SERINC2 -547795 sc-eQTL 1.49e-01 0.141 0.0976 0.585 cMono_IL1B L2
ENSG00000284543 LINC01226 -644456 sc-eQTL 9.17e-01 -0.00903 0.0867 0.585 cMono_IL1B L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 9.40e-02 0.135 0.0804 0.585 cMono_IL1B L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 6.14e-01 0.0413 0.0816 0.585 cMono_S100A L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 7.84e-01 0.0264 0.0965 0.585 cMono_S100A L2
ENSG00000134644 PUM1 -204221 sc-eQTL 7.62e-02 0.123 0.0692 0.585 cMono_S100A L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 9.94e-01 0.000404 0.0536 0.585 cMono_S100A L2
ENSG00000162512 SDC3 -46988 sc-eQTL 6.18e-01 -0.0463 0.0926 0.585 cMono_S100A L2
ENSG00000162517 PEF1 -783126 sc-eQTL 3.27e-01 -0.0819 0.0834 0.585 cMono_S100A L2
ENSG00000168528 SERINC2 -547795 sc-eQTL 1.57e-01 0.139 0.0976 0.585 cMono_S100A L2
ENSG00000284543 LINC01226 -644456 sc-eQTL 6.84e-01 -0.0325 0.0796 0.585 cMono_S100A L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 3.49e-01 -0.075 0.0798 0.585 cMono_S100A L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 7.13e-01 -0.0456 0.124 0.618 gdT L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 9.76e-01 0.00325 0.106 0.618 gdT L2
ENSG00000134644 PUM1 -204221 sc-eQTL 9.07e-01 0.0128 0.11 0.618 gdT L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 6.84e-01 0.0486 0.119 0.618 gdT L2
ENSG00000162517 PEF1 -783126 sc-eQTL 7.04e-01 0.0416 0.109 0.618 gdT L2
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 5.62e-01 -0.0638 0.11 0.618 gdT L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 8.20e-01 -0.0243 0.107 0.618 gdT L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 9.72e-01 -0.00321 0.0912 0.591 intMono L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 1.49e-01 0.141 0.0976 0.591 intMono L2
ENSG00000134644 PUM1 -204221 sc-eQTL 5.26e-01 -0.0529 0.0831 0.591 intMono L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 4.65e-01 0.0477 0.0652 0.591 intMono L2
ENSG00000162512 SDC3 -46988 sc-eQTL 5.40e-01 -0.0548 0.0893 0.591 intMono L2
ENSG00000162517 PEF1 -783126 sc-eQTL 2.31e-02 0.212 0.0927 0.591 intMono L2
ENSG00000168528 SERINC2 -547795 sc-eQTL 1.04e-01 0.152 0.093 0.591 intMono L2
ENSG00000284543 LINC01226 -644456 sc-eQTL 1.86e-01 -0.117 0.0883 0.591 intMono L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 9.00e-02 0.15 0.0881 0.591 intMono L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 7.11e-01 -0.0312 0.084 0.584 ncMono L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 2.65e-01 0.0997 0.0893 0.584 ncMono L2
ENSG00000134644 PUM1 -204221 sc-eQTL 2.62e-01 -0.082 0.0729 0.584 ncMono L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 5.60e-01 0.0388 0.0664 0.584 ncMono L2
ENSG00000162512 SDC3 -46988 sc-eQTL 5.02e-02 -0.145 0.0738 0.584 ncMono L2
ENSG00000162517 PEF1 -783126 sc-eQTL 4.93e-01 0.0586 0.0853 0.584 ncMono L2
ENSG00000168528 SERINC2 -547795 sc-eQTL 5.62e-01 0.0472 0.0812 0.584 ncMono L2
ENSG00000284543 LINC01226 -644456 sc-eQTL 4.29e-01 0.0643 0.0811 0.584 ncMono L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 4.20e-01 -0.0679 0.0841 0.584 ncMono L2
ENSG00000060688 SNRNP40 -435018 sc-eQTL 5.49e-01 -0.0574 0.0955 0.579 pDC L2
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 5.52e-01 -0.0625 0.105 0.579 pDC L2
ENSG00000134644 PUM1 -204221 sc-eQTL 3.73e-01 -0.0774 0.0867 0.579 pDC L2
ENSG00000162511 LAPTM5 103996 sc-eQTL 7.53e-01 0.0255 0.0808 0.579 pDC L2
ENSG00000162517 PEF1 -783126 sc-eQTL 4.83e-01 -0.0736 0.105 0.579 pDC L2
ENSG00000168528 SERINC2 -547795 sc-eQTL 7.40e-01 -0.0326 0.098 0.579 pDC L2
ENSG00000284543 LINC01226 -644456 sc-eQTL 5.23e-01 0.0486 0.076 0.579 pDC L2
ENSG00000287510 AL137857.1 130077 sc-eQTL 7.57e-02 0.158 0.0886 0.579 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -435018 sc-eQTL 7.97e-01 -0.0249 0.0969 0.585 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 8.31e-01 -0.0172 0.0807 0.585 B_Memory LOneK1K
ENSG00000134644 PUM1 -204221 sc-eQTL 1.17e-01 -0.112 0.0711 0.585 B_Memory LOneK1K
ENSG00000162510 MATN1 138185 sc-eQTL 8.38e-01 -0.0167 0.0815 0.585 B_Memory LOneK1K
ENSG00000162511 LAPTM5 103996 sc-eQTL 8.28e-01 -0.0112 0.0512 0.585 B_Memory LOneK1K
ENSG00000162517 PEF1 -783126 sc-eQTL 6.91e-01 -0.0337 0.0848 0.585 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 7.94e-01 0.0177 0.0677 0.585 B_Memory LOneK1K
ENSG00000287510 AL137857.1 130077 sc-eQTL 1.86e-01 0.0977 0.0735 0.585 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -435018 sc-eQTL 1.76e-01 0.119 0.0877 0.585 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 9.40e-01 0.00528 0.0696 0.585 B_Naive LOneK1K
ENSG00000134644 PUM1 -204221 sc-eQTL 1.09e-01 -0.105 0.0655 0.585 B_Naive LOneK1K
ENSG00000162510 MATN1 138185 sc-eQTL 8.81e-01 0.00947 0.0634 0.585 B_Naive LOneK1K
ENSG00000162511 LAPTM5 103996 sc-eQTL 4.95e-01 0.0305 0.0446 0.585 B_Naive LOneK1K
ENSG00000162517 PEF1 -783126 sc-eQTL 9.39e-01 0.0063 0.0815 0.585 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 6.47e-01 0.0264 0.0576 0.585 B_Naive LOneK1K
ENSG00000287510 AL137857.1 130077 sc-eQTL 7.09e-01 0.0256 0.0685 0.585 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -435018 sc-eQTL 3.23e-01 0.0729 0.0737 0.585 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 8.81e-01 0.0126 0.0837 0.585 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -204221 sc-eQTL 3.53e-02 0.112 0.0528 0.585 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 103996 sc-eQTL 5.49e-01 0.0281 0.0469 0.585 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -46988 sc-eQTL 6.82e-02 -0.174 0.095 0.585 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -783126 sc-eQTL 3.45e-01 -0.0635 0.0671 0.585 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -547795 sc-eQTL 1.48e-01 0.142 0.098 0.585 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -644456 sc-eQTL 9.54e-01 0.00462 0.0807 0.585 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 130077 sc-eQTL 5.02e-01 0.0508 0.0755 0.585 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -435018 sc-eQTL 4.19e-01 -0.0653 0.0806 0.586 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 4.95e-02 0.173 0.0876 0.586 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -204221 sc-eQTL 2.04e-01 -0.092 0.0721 0.586 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 103996 sc-eQTL 8.38e-01 0.0119 0.0579 0.586 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -46988 sc-eQTL 9.28e-02 -0.142 0.084 0.586 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -783126 sc-eQTL 9.09e-02 0.13 0.0763 0.586 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -547795 sc-eQTL 5.67e-01 0.0503 0.0877 0.586 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -644456 sc-eQTL 7.48e-01 0.0268 0.0832 0.586 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 130077 sc-eQTL 6.22e-01 -0.0412 0.0833 0.586 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -435018 sc-eQTL 3.21e-01 0.0905 0.0911 0.586 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -903123 sc-eQTL 2.29e-01 0.0935 0.0775 0.586 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -435212 sc-eQTL 4.32e-01 -0.0491 0.0623 0.586 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -204221 sc-eQTL 3.70e-02 -0.142 0.0676 0.586 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 103996 sc-eQTL 3.72e-01 0.0682 0.0762 0.586 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -783126 sc-eQTL 4.85e-01 0.0405 0.0579 0.586 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 143266 sc-eQTL 2.27e-01 0.106 0.0878 0.586 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 130077 sc-eQTL 1.15e-02 0.191 0.0749 0.586 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -435212 eQTL 3.72e-02 0.0357 0.0171 0.0 0.0 0.454

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -435212 3.62e-07 2.3e-07 6.99e-08 2.36e-07 1.1e-07 8.4e-08 2.24e-07 5.56e-08 1.85e-07 1.11e-07 1.83e-07 1.37e-07 3.4e-07 8.55e-08 6.2e-08 9.48e-08 5.73e-08 2.33e-07 7.76e-08 7.83e-08 1.24e-07 1.9e-07 1.69e-07 4.07e-08 2.74e-07 1.56e-07 1.29e-07 1.47e-07 1.39e-07 1.69e-07 1.52e-07 4.51e-08 4.87e-08 9.72e-08 5.24e-08 4.68e-08 5.67e-08 7.51e-08 6.49e-08 5.56e-08 5.34e-08 1.68e-07 3.46e-08 1.97e-08 4.06e-08 1.03e-08 8.46e-08 0.0 5.54e-08
ENSG00000186056 \N 143266 3.24e-06 3.66e-06 3.23e-07 2.07e-06 4.71e-07 7.73e-07 1.87e-06 5.79e-07 1.89e-06 8.89e-07 2.53e-06 1.26e-06 3.68e-06 1.38e-06 8.32e-07 1.45e-06 1.61e-06 2.25e-06 1.13e-06 1.32e-06 9.29e-07 3.03e-06 2.16e-06 9.56e-07 4.02e-06 1.37e-06 1.21e-06 1.54e-06 2.07e-06 2.55e-06 2.08e-06 2.83e-07 5.45e-07 1.08e-06 1.13e-06 9.57e-07 7.59e-07 4.21e-07 7.83e-07 1.87e-07 2.59e-07 3.43e-06 5.89e-07 1.99e-07 3.62e-07 3.29e-07 2.8e-07 2.23e-07 2.13e-07