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Genes within 1Mb (chr1:30860752:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -436036 sc-eQTL 4.47e-01 0.123 0.162 0.94 B L1
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 7.27e-01 -0.0454 0.13 0.94 B L1
ENSG00000134644 PUM1 -205239 sc-eQTL 2.53e-01 -0.124 0.109 0.94 B L1
ENSG00000162510 MATN1 137167 sc-eQTL 5.79e-01 -0.0636 0.114 0.94 B L1
ENSG00000162511 LAPTM5 102978 sc-eQTL 2.10e-01 0.112 0.0893 0.94 B L1
ENSG00000162517 PEF1 -784144 sc-eQTL 8.29e-01 0.0292 0.135 0.94 B L1
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 1.50e-01 0.151 0.105 0.94 B L1
ENSG00000287510 AL137857.1 129059 sc-eQTL 7.04e-01 0.0473 0.124 0.94 B L1
ENSG00000060688 SNRNP40 -436036 sc-eQTL 8.85e-01 -0.0202 0.14 0.94 CD4T L1
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 1.30e-01 -0.165 0.109 0.94 CD4T L1
ENSG00000134644 PUM1 -205239 sc-eQTL 7.55e-01 0.0304 0.0973 0.94 CD4T L1
ENSG00000162511 LAPTM5 102978 sc-eQTL 9.82e-02 0.178 0.107 0.94 CD4T L1
ENSG00000162517 PEF1 -784144 sc-eQTL 4.81e-01 -0.0795 0.113 0.94 CD4T L1
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 4.33e-01 0.0757 0.0963 0.94 CD4T L1
ENSG00000287510 AL137857.1 129059 sc-eQTL 6.74e-01 0.0487 0.116 0.94 CD4T L1
ENSG00000060688 SNRNP40 -436036 sc-eQTL 1.41e-01 0.269 0.182 0.94 CD8T L1
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 1.23e-01 0.188 0.121 0.94 CD8T L1
ENSG00000134644 PUM1 -205239 sc-eQTL 4.57e-01 0.0797 0.107 0.94 CD8T L1
ENSG00000162511 LAPTM5 102978 sc-eQTL 1.19e-01 0.162 0.103 0.94 CD8T L1
ENSG00000162517 PEF1 -784144 sc-eQTL 9.87e-01 -0.00208 0.128 0.94 CD8T L1
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 9.74e-01 0.00401 0.122 0.94 CD8T L1
ENSG00000287510 AL137857.1 129059 sc-eQTL 6.30e-01 0.074 0.153 0.94 CD8T L1
ENSG00000060688 SNRNP40 -436036 sc-eQTL 5.75e-01 0.0935 0.167 0.944 DC L1
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 1.70e-01 -0.271 0.196 0.944 DC L1
ENSG00000134644 PUM1 -205239 sc-eQTL 8.08e-01 -0.0377 0.155 0.944 DC L1
ENSG00000162511 LAPTM5 102978 sc-eQTL 1.63e-01 -0.154 0.11 0.944 DC L1
ENSG00000162517 PEF1 -784144 sc-eQTL 5.52e-01 -0.107 0.179 0.944 DC L1
ENSG00000168528 SERINC2 -548813 sc-eQTL 5.57e-01 0.107 0.182 0.944 DC L1
ENSG00000284543 LINC01226 -645474 sc-eQTL 2.89e-01 -0.128 0.12 0.944 DC L1
ENSG00000287510 AL137857.1 129059 sc-eQTL 3.42e-01 0.166 0.174 0.944 DC L1
ENSG00000060688 SNRNP40 -436036 sc-eQTL 6.82e-01 0.0523 0.128 0.94 Mono L1
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 3.04e-01 0.163 0.158 0.94 Mono L1
ENSG00000134644 PUM1 -205239 sc-eQTL 4.64e-01 -0.0744 0.101 0.94 Mono L1
ENSG00000162511 LAPTM5 102978 sc-eQTL 6.77e-01 0.0389 0.0933 0.94 Mono L1
ENSG00000162512 SDC3 -48006 sc-eQTL 1.49e-01 0.259 0.179 0.94 Mono L1
ENSG00000162517 PEF1 -784144 sc-eQTL 7.90e-01 -0.0336 0.126 0.94 Mono L1
ENSG00000168528 SERINC2 -548813 sc-eQTL 5.93e-01 0.103 0.192 0.94 Mono L1
ENSG00000284543 LINC01226 -645474 sc-eQTL 7.75e-01 -0.0485 0.17 0.94 Mono L1
ENSG00000287510 AL137857.1 129059 sc-eQTL 8.83e-01 -0.0218 0.148 0.94 Mono L1
ENSG00000060688 SNRNP40 -436036 sc-eQTL 3.92e-01 -0.152 0.177 0.942 NK L1
ENSG00000121753 ADGRB2 -904141 sc-eQTL 6.69e-01 -0.0654 0.153 0.942 NK L1
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 7.13e-01 0.0447 0.121 0.942 NK L1
ENSG00000134644 PUM1 -205239 sc-eQTL 7.18e-01 -0.0459 0.127 0.942 NK L1
ENSG00000162511 LAPTM5 102978 sc-eQTL 6.48e-01 0.067 0.146 0.942 NK L1
ENSG00000162517 PEF1 -784144 sc-eQTL 9.87e-01 -0.00171 0.107 0.942 NK L1
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 2.89e-01 0.174 0.164 0.942 NK L1
ENSG00000287510 AL137857.1 129059 sc-eQTL 8.39e-01 0.0309 0.152 0.942 NK L1
ENSG00000060688 SNRNP40 -436036 sc-eQTL 8.31e-01 -0.0281 0.131 0.94 Other_T L1
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 5.17e-01 -0.0911 0.14 0.94 Other_T L1
ENSG00000134644 PUM1 -205239 sc-eQTL 6.85e-01 -0.0513 0.126 0.94 Other_T L1
ENSG00000162511 LAPTM5 102978 sc-eQTL 1.34e-01 0.155 0.103 0.94 Other_T L1
ENSG00000162517 PEF1 -784144 sc-eQTL 5.57e-02 0.264 0.137 0.94 Other_T L1
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 2.81e-01 0.183 0.169 0.94 Other_T L1
ENSG00000287510 AL137857.1 129059 sc-eQTL 4.82e-01 -0.124 0.176 0.94 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -436036 sc-eQTL 3.13e-01 0.239 0.236 0.949 B_Activated L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 7.12e-01 -0.0885 0.239 0.949 B_Activated L2
ENSG00000134644 PUM1 -205239 sc-eQTL 5.87e-01 0.121 0.222 0.949 B_Activated L2
ENSG00000162510 MATN1 137167 sc-eQTL 9.86e-01 0.00339 0.194 0.949 B_Activated L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 2.27e-01 0.164 0.135 0.949 B_Activated L2
ENSG00000162517 PEF1 -784144 sc-eQTL 8.39e-01 -0.0469 0.231 0.949 B_Activated L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 7.00e-01 0.0843 0.219 0.949 B_Activated L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 1.46e-01 -0.281 0.192 0.949 B_Activated L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 8.59e-02 0.34 0.197 0.94 B_Intermediate L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 1.12e-01 -0.262 0.164 0.94 B_Intermediate L2
ENSG00000134644 PUM1 -205239 sc-eQTL 9.58e-01 -0.00817 0.156 0.94 B_Intermediate L2
ENSG00000162510 MATN1 137167 sc-eQTL 9.41e-01 0.0121 0.162 0.94 B_Intermediate L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 5.52e-02 0.19 0.0987 0.94 B_Intermediate L2
ENSG00000162517 PEF1 -784144 sc-eQTL 6.70e-01 -0.079 0.185 0.94 B_Intermediate L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 2.55e-01 0.159 0.139 0.94 B_Intermediate L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 2.69e-01 0.173 0.156 0.94 B_Intermediate L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 8.90e-01 -0.0269 0.194 0.94 B_Memory L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 9.94e-01 0.00126 0.179 0.94 B_Memory L2
ENSG00000134644 PUM1 -205239 sc-eQTL 4.69e-02 -0.308 0.154 0.94 B_Memory L2
ENSG00000162510 MATN1 137167 sc-eQTL 2.94e-01 0.156 0.148 0.94 B_Memory L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 5.99e-02 0.248 0.131 0.94 B_Memory L2
ENSG00000162517 PEF1 -784144 sc-eQTL 9.27e-01 -0.0162 0.176 0.94 B_Memory L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 3.85e-01 0.131 0.151 0.94 B_Memory L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 5.28e-01 -0.112 0.177 0.94 B_Memory L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 7.75e-01 0.0504 0.176 0.94 B_Naive1 L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 1.60e-01 -0.214 0.152 0.94 B_Naive1 L2
ENSG00000134644 PUM1 -205239 sc-eQTL 3.29e-02 -0.285 0.133 0.94 B_Naive1 L2
ENSG00000162510 MATN1 137167 sc-eQTL 4.99e-01 -0.0922 0.136 0.94 B_Naive1 L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 3.72e-01 0.0814 0.0909 0.94 B_Naive1 L2
ENSG00000162517 PEF1 -784144 sc-eQTL 6.07e-01 0.0826 0.16 0.94 B_Naive1 L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 2.36e-01 0.142 0.119 0.94 B_Naive1 L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 8.20e-01 0.0336 0.148 0.94 B_Naive1 L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 7.82e-01 0.0522 0.188 0.94 B_Naive2 L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 6.86e-02 0.282 0.154 0.94 B_Naive2 L2
ENSG00000134644 PUM1 -205239 sc-eQTL 6.76e-01 0.0636 0.152 0.94 B_Naive2 L2
ENSG00000162510 MATN1 137167 sc-eQTL 5.22e-01 0.0934 0.146 0.94 B_Naive2 L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 2.41e-01 0.116 0.0987 0.94 B_Naive2 L2
ENSG00000162517 PEF1 -784144 sc-eQTL 9.01e-01 0.0225 0.18 0.94 B_Naive2 L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 3.75e-01 -0.128 0.144 0.94 B_Naive2 L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 4.12e-01 0.128 0.156 0.94 B_Naive2 L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 6.25e-01 0.0907 0.185 0.936 CD4_CTL L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 2.93e-01 0.191 0.182 0.936 CD4_CTL L2
ENSG00000134644 PUM1 -205239 sc-eQTL 3.07e-02 0.384 0.177 0.936 CD4_CTL L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 5.75e-01 0.0894 0.159 0.936 CD4_CTL L2
ENSG00000162517 PEF1 -784144 sc-eQTL 9.20e-01 0.0164 0.163 0.936 CD4_CTL L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 5.44e-02 -0.334 0.173 0.936 CD4_CTL L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 5.90e-01 -0.0829 0.154 0.936 CD4_CTL L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 8.65e-01 -0.0247 0.145 0.94 CD4_Naive L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 1.96e-01 -0.166 0.128 0.94 CD4_Naive L2
ENSG00000134644 PUM1 -205239 sc-eQTL 8.62e-01 -0.0179 0.103 0.94 CD4_Naive L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 5.72e-02 0.209 0.109 0.94 CD4_Naive L2
ENSG00000162517 PEF1 -784144 sc-eQTL 1.58e-01 -0.17 0.12 0.94 CD4_Naive L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 2.94e-01 0.117 0.111 0.94 CD4_Naive L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 1.40e-01 0.189 0.128 0.94 CD4_Naive L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 2.71e-01 -0.201 0.182 0.94 CD4_TCM L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 7.61e-01 -0.0448 0.147 0.94 CD4_TCM L2
ENSG00000134644 PUM1 -205239 sc-eQTL 5.63e-01 0.0754 0.13 0.94 CD4_TCM L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 4.15e-01 0.0882 0.108 0.94 CD4_TCM L2
ENSG00000162517 PEF1 -784144 sc-eQTL 9.57e-01 0.00788 0.145 0.94 CD4_TCM L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 3.74e-01 -0.122 0.137 0.94 CD4_TCM L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 9.05e-01 -0.0183 0.153 0.94 CD4_TCM L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 6.52e-01 -0.0819 0.181 0.94 CD4_TEM L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 5.06e-01 -0.115 0.173 0.94 CD4_TEM L2
ENSG00000134644 PUM1 -205239 sc-eQTL 9.37e-01 -0.0114 0.144 0.94 CD4_TEM L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 3.51e-01 0.136 0.145 0.94 CD4_TEM L2
ENSG00000162517 PEF1 -784144 sc-eQTL 8.48e-01 0.0313 0.163 0.94 CD4_TEM L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 4.93e-01 -0.117 0.17 0.94 CD4_TEM L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 4.20e-01 0.135 0.168 0.94 CD4_TEM L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 7.76e-01 0.0568 0.199 0.94 CD8_CTL L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 2.96e-02 0.331 0.151 0.94 CD8_CTL L2
ENSG00000134644 PUM1 -205239 sc-eQTL 4.21e-01 -0.119 0.148 0.94 CD8_CTL L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 3.85e-01 0.143 0.164 0.94 CD8_CTL L2
ENSG00000162517 PEF1 -784144 sc-eQTL 4.00e-01 -0.12 0.143 0.94 CD8_CTL L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 5.31e-01 -0.108 0.172 0.94 CD8_CTL L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 8.19e-01 -0.0373 0.162 0.94 CD8_CTL L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 1.77e-01 0.245 0.181 0.94 CD8_Naive L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 5.75e-01 0.088 0.157 0.94 CD8_Naive L2
ENSG00000134644 PUM1 -205239 sc-eQTL 9.67e-01 -0.0053 0.126 0.94 CD8_Naive L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 2.64e-02 0.267 0.119 0.94 CD8_Naive L2
ENSG00000162517 PEF1 -784144 sc-eQTL 6.73e-01 -0.0709 0.168 0.94 CD8_Naive L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 5.25e-01 0.0961 0.151 0.94 CD8_Naive L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 8.87e-01 -0.0234 0.164 0.94 CD8_Naive L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 1.44e-01 -0.306 0.209 0.944 CD8_TCM L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 4.29e-01 0.152 0.192 0.944 CD8_TCM L2
ENSG00000134644 PUM1 -205239 sc-eQTL 2.97e-01 0.189 0.18 0.944 CD8_TCM L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 5.21e-02 0.366 0.187 0.944 CD8_TCM L2
ENSG00000162517 PEF1 -784144 sc-eQTL 6.61e-01 -0.0848 0.193 0.944 CD8_TCM L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 1.90e-01 -0.229 0.174 0.944 CD8_TCM L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 2.27e-01 0.214 0.176 0.944 CD8_TCM L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 7.13e-01 -0.0699 0.19 0.941 CD8_TEM L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 7.33e-01 0.0621 0.182 0.941 CD8_TEM L2
ENSG00000134644 PUM1 -205239 sc-eQTL 7.14e-01 -0.0683 0.186 0.941 CD8_TEM L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 3.46e-01 -0.165 0.174 0.941 CD8_TEM L2
ENSG00000162517 PEF1 -784144 sc-eQTL 4.60e-01 0.122 0.164 0.941 CD8_TEM L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 8.36e-01 0.0376 0.181 0.941 CD8_TEM L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 5.87e-01 -0.0892 0.164 0.941 CD8_TEM L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 3.69e-01 -0.174 0.193 0.939 MAIT L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 4.12e-01 -0.141 0.171 0.939 MAIT L2
ENSG00000134644 PUM1 -205239 sc-eQTL 1.66e-01 -0.227 0.164 0.939 MAIT L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 4.59e-01 0.115 0.155 0.939 MAIT L2
ENSG00000162517 PEF1 -784144 sc-eQTL 4.06e-02 0.348 0.169 0.939 MAIT L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 1.28e-01 0.262 0.172 0.939 MAIT L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 5.64e-01 -0.103 0.178 0.939 MAIT L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 1.92e-01 0.262 0.2 0.942 NK_CD56bright L2
ENSG00000121753 ADGRB2 -904141 sc-eQTL 7.68e-01 -0.0465 0.157 0.942 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 6.78e-01 -0.0706 0.17 0.942 NK_CD56bright L2
ENSG00000134644 PUM1 -205239 sc-eQTL 2.09e-01 0.224 0.178 0.942 NK_CD56bright L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 4.38e-01 0.136 0.176 0.942 NK_CD56bright L2
ENSG00000162517 PEF1 -784144 sc-eQTL 7.52e-01 -0.054 0.171 0.942 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 5.11e-01 0.116 0.177 0.942 NK_CD56bright L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 7.12e-01 -0.0644 0.174 0.942 NK_CD56bright L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 8.29e-02 -0.326 0.187 0.942 NK_CD56dim L2
ENSG00000121753 ADGRB2 -904141 sc-eQTL 8.54e-01 -0.0305 0.166 0.942 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 9.62e-01 -0.00658 0.139 0.942 NK_CD56dim L2
ENSG00000134644 PUM1 -205239 sc-eQTL 6.58e-01 -0.0634 0.143 0.942 NK_CD56dim L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 8.28e-01 0.0331 0.152 0.942 NK_CD56dim L2
ENSG00000162517 PEF1 -784144 sc-eQTL 8.00e-01 0.0345 0.136 0.942 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 6.08e-01 0.0981 0.191 0.942 NK_CD56dim L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 7.07e-01 -0.0592 0.158 0.942 NK_CD56dim L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 3.69e-01 -0.175 0.194 0.938 NK_HLA L2
ENSG00000121753 ADGRB2 -904141 sc-eQTL 2.65e-01 -0.172 0.154 0.938 NK_HLA L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 6.05e-01 -0.09 0.174 0.938 NK_HLA L2
ENSG00000134644 PUM1 -205239 sc-eQTL 5.52e-01 0.101 0.169 0.938 NK_HLA L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 7.64e-01 -0.0487 0.162 0.938 NK_HLA L2
ENSG00000162517 PEF1 -784144 sc-eQTL 9.06e-01 -0.0214 0.182 0.938 NK_HLA L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 4.42e-01 0.132 0.172 0.938 NK_HLA L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 5.66e-01 -0.0956 0.166 0.938 NK_HLA L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 9.51e-01 -0.0112 0.183 0.942 NK_cytokine L2
ENSG00000121753 ADGRB2 -904141 sc-eQTL 6.42e-01 -0.0769 0.165 0.942 NK_cytokine L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 6.48e-01 0.0654 0.143 0.942 NK_cytokine L2
ENSG00000134644 PUM1 -205239 sc-eQTL 2.73e-01 -0.169 0.154 0.942 NK_cytokine L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 9.52e-01 -0.0103 0.17 0.942 NK_cytokine L2
ENSG00000162517 PEF1 -784144 sc-eQTL 8.51e-01 -0.0273 0.145 0.942 NK_cytokine L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 4.40e-01 0.139 0.18 0.942 NK_cytokine L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 2.95e-01 0.176 0.167 0.942 NK_cytokine L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 2.95e-01 0.265 0.251 0.948 PB L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 5.11e-01 -0.193 0.292 0.948 PB L2
ENSG00000134644 PUM1 -205239 sc-eQTL 3.60e-01 0.233 0.253 0.948 PB L2
ENSG00000162510 MATN1 137167 sc-eQTL 4.81e-01 0.167 0.237 0.948 PB L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 4.56e-01 0.126 0.169 0.948 PB L2
ENSG00000162517 PEF1 -784144 sc-eQTL 4.64e-01 -0.191 0.26 0.948 PB L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 7.43e-01 -0.0763 0.232 0.948 PB L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 7.81e-01 0.0687 0.247 0.948 PB L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 2.47e-01 0.166 0.142 0.941 Pro_T L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 3.07e-01 -0.185 0.181 0.941 Pro_T L2
ENSG00000134644 PUM1 -205239 sc-eQTL 3.83e-01 0.148 0.169 0.941 Pro_T L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 6.21e-01 0.0601 0.121 0.941 Pro_T L2
ENSG00000162517 PEF1 -784144 sc-eQTL 4.82e-01 -0.125 0.178 0.941 Pro_T L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 4.52e-01 -0.128 0.169 0.941 Pro_T L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 6.01e-02 -0.293 0.155 0.941 Pro_T L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 9.99e-02 0.313 0.189 0.94 Treg L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 3.63e-01 -0.168 0.184 0.94 Treg L2
ENSG00000134644 PUM1 -205239 sc-eQTL 5.59e-01 0.0863 0.147 0.94 Treg L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 2.26e-01 0.205 0.168 0.94 Treg L2
ENSG00000162517 PEF1 -784144 sc-eQTL 4.15e-01 0.149 0.182 0.94 Treg L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 7.64e-01 -0.0518 0.172 0.94 Treg L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 9.85e-01 0.00322 0.172 0.94 Treg L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 1.80e-01 0.254 0.188 0.939 cDC L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 3.26e-01 -0.201 0.204 0.939 cDC L2
ENSG00000134644 PUM1 -205239 sc-eQTL 5.25e-01 0.112 0.176 0.939 cDC L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 3.89e-01 -0.106 0.123 0.939 cDC L2
ENSG00000162517 PEF1 -784144 sc-eQTL 6.64e-01 -0.0778 0.178 0.939 cDC L2
ENSG00000168528 SERINC2 -548813 sc-eQTL 2.19e-01 0.194 0.158 0.939 cDC L2
ENSG00000284543 LINC01226 -645474 sc-eQTL 7.40e-01 0.0517 0.156 0.939 cDC L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 1.05e-01 0.271 0.166 0.939 cDC L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 8.48e-01 -0.0298 0.155 0.94 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 3.31e-01 0.168 0.172 0.94 cMono_IL1B L2
ENSG00000134644 PUM1 -205239 sc-eQTL 5.01e-01 -0.0788 0.117 0.94 cMono_IL1B L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 8.65e-01 0.0174 0.103 0.94 cMono_IL1B L2
ENSG00000162512 SDC3 -48006 sc-eQTL 1.16e-01 0.304 0.192 0.94 cMono_IL1B L2
ENSG00000162517 PEF1 -784144 sc-eQTL 6.93e-01 0.0625 0.158 0.94 cMono_IL1B L2
ENSG00000168528 SERINC2 -548813 sc-eQTL 4.49e-01 0.148 0.196 0.94 cMono_IL1B L2
ENSG00000284543 LINC01226 -645474 sc-eQTL 9.62e-01 -0.00833 0.173 0.94 cMono_IL1B L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 4.59e-01 0.12 0.161 0.94 cMono_IL1B L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 2.88e-01 0.172 0.161 0.94 cMono_S100A L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 4.75e-01 0.136 0.191 0.94 cMono_S100A L2
ENSG00000134644 PUM1 -205239 sc-eQTL 2.80e-01 -0.149 0.138 0.94 cMono_S100A L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 8.38e-01 0.0218 0.106 0.94 cMono_S100A L2
ENSG00000162512 SDC3 -48006 sc-eQTL 5.83e-02 0.346 0.182 0.94 cMono_S100A L2
ENSG00000162517 PEF1 -784144 sc-eQTL 3.39e-01 0.158 0.165 0.94 cMono_S100A L2
ENSG00000168528 SERINC2 -548813 sc-eQTL 4.46e-01 0.148 0.194 0.94 cMono_S100A L2
ENSG00000284543 LINC01226 -645474 sc-eQTL 2.81e-01 -0.17 0.157 0.94 cMono_S100A L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 7.91e-01 0.042 0.158 0.94 cMono_S100A L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 4.41e-01 -0.186 0.241 0.945 gdT L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 6.11e-02 0.387 0.205 0.945 gdT L2
ENSG00000134644 PUM1 -205239 sc-eQTL 1.87e-01 0.282 0.213 0.945 gdT L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 1.63e-01 0.324 0.231 0.945 gdT L2
ENSG00000162517 PEF1 -784144 sc-eQTL 1.04e-01 0.345 0.211 0.945 gdT L2
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 6.02e-01 -0.112 0.214 0.945 gdT L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 4.19e-01 0.168 0.207 0.945 gdT L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 7.67e-01 -0.0541 0.182 0.944 intMono L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 7.12e-01 0.0724 0.196 0.944 intMono L2
ENSG00000134644 PUM1 -205239 sc-eQTL 4.45e-01 -0.127 0.166 0.944 intMono L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 5.33e-01 0.0814 0.13 0.944 intMono L2
ENSG00000162512 SDC3 -48006 sc-eQTL 6.77e-01 -0.0746 0.179 0.944 intMono L2
ENSG00000162517 PEF1 -784144 sc-eQTL 2.98e-01 -0.195 0.187 0.944 intMono L2
ENSG00000168528 SERINC2 -548813 sc-eQTL 2.16e-01 0.231 0.186 0.944 intMono L2
ENSG00000284543 LINC01226 -645474 sc-eQTL 4.59e-01 0.131 0.177 0.944 intMono L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 9.27e-01 -0.0162 0.177 0.944 intMono L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 8.51e-01 -0.0317 0.168 0.941 ncMono L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 4.33e-01 0.14 0.179 0.941 ncMono L2
ENSG00000134644 PUM1 -205239 sc-eQTL 2.27e-02 0.332 0.145 0.941 ncMono L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 9.20e-01 -0.0134 0.133 0.941 ncMono L2
ENSG00000162512 SDC3 -48006 sc-eQTL 5.79e-01 -0.0829 0.149 0.941 ncMono L2
ENSG00000162517 PEF1 -784144 sc-eQTL 7.45e-01 -0.0558 0.171 0.941 ncMono L2
ENSG00000168528 SERINC2 -548813 sc-eQTL 6.65e-01 0.0706 0.163 0.941 ncMono L2
ENSG00000284543 LINC01226 -645474 sc-eQTL 2.66e-01 0.181 0.162 0.941 ncMono L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 1.25e-01 -0.258 0.168 0.941 ncMono L2
ENSG00000060688 SNRNP40 -436036 sc-eQTL 7.72e-01 0.0516 0.178 0.932 pDC L2
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 5.75e-01 -0.11 0.195 0.932 pDC L2
ENSG00000134644 PUM1 -205239 sc-eQTL 1.33e-01 -0.243 0.161 0.932 pDC L2
ENSG00000162511 LAPTM5 102978 sc-eQTL 4.62e-01 -0.111 0.15 0.932 pDC L2
ENSG00000162517 PEF1 -784144 sc-eQTL 9.06e-01 0.0232 0.195 0.932 pDC L2
ENSG00000168528 SERINC2 -548813 sc-eQTL 9.88e-01 0.00285 0.182 0.932 pDC L2
ENSG00000284543 LINC01226 -645474 sc-eQTL 2.73e-01 -0.155 0.141 0.932 pDC L2
ENSG00000287510 AL137857.1 129059 sc-eQTL 9.93e-01 -0.00142 0.167 0.932 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -436036 sc-eQTL 1.12e-01 0.304 0.19 0.94 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 3.63e-01 -0.145 0.159 0.94 B_Memory LOneK1K
ENSG00000134644 PUM1 -205239 sc-eQTL 3.15e-01 -0.142 0.141 0.94 B_Memory LOneK1K
ENSG00000162510 MATN1 137167 sc-eQTL 4.36e-01 0.125 0.161 0.94 B_Memory LOneK1K
ENSG00000162511 LAPTM5 102978 sc-eQTL 1.05e-01 0.164 0.1 0.94 B_Memory LOneK1K
ENSG00000162517 PEF1 -784144 sc-eQTL 8.05e-01 -0.0415 0.167 0.94 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 4.37e-01 0.104 0.133 0.94 B_Memory LOneK1K
ENSG00000287510 AL137857.1 129059 sc-eQTL 9.39e-01 -0.0111 0.146 0.94 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -436036 sc-eQTL 5.77e-01 0.0961 0.172 0.94 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 9.25e-01 -0.0128 0.136 0.94 B_Naive LOneK1K
ENSG00000134644 PUM1 -205239 sc-eQTL 8.61e-02 -0.221 0.128 0.94 B_Naive LOneK1K
ENSG00000162510 MATN1 137167 sc-eQTL 3.52e-01 -0.116 0.124 0.94 B_Naive LOneK1K
ENSG00000162511 LAPTM5 102978 sc-eQTL 1.77e-01 0.118 0.0869 0.94 B_Naive LOneK1K
ENSG00000162517 PEF1 -784144 sc-eQTL 6.48e-01 0.0728 0.159 0.94 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 6.80e-01 0.0466 0.113 0.94 B_Naive LOneK1K
ENSG00000287510 AL137857.1 129059 sc-eQTL 4.62e-01 0.0985 0.134 0.94 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -436036 sc-eQTL 4.47e-01 0.111 0.146 0.94 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 1.64e-01 0.231 0.165 0.94 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -205239 sc-eQTL 3.65e-01 -0.096 0.106 0.94 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 102978 sc-eQTL 4.23e-01 0.0745 0.0929 0.94 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -48006 sc-eQTL 2.10e-02 0.436 0.187 0.94 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -784144 sc-eQTL 7.45e-01 0.0434 0.133 0.94 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -548813 sc-eQTL 4.53e-01 0.147 0.195 0.94 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -645474 sc-eQTL 7.47e-01 -0.0516 0.16 0.94 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 129059 sc-eQTL 5.97e-01 0.0794 0.15 0.94 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -436036 sc-eQTL 7.51e-01 -0.0513 0.162 0.942 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 6.38e-01 0.0832 0.177 0.942 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -205239 sc-eQTL 3.48e-01 0.136 0.145 0.942 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 102978 sc-eQTL 5.76e-01 -0.0649 0.116 0.942 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -48006 sc-eQTL 6.75e-01 -0.0709 0.169 0.942 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -784144 sc-eQTL 2.91e-01 -0.163 0.153 0.942 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -548813 sc-eQTL 4.05e-01 0.146 0.175 0.942 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -645474 sc-eQTL 2.88e-01 0.177 0.166 0.942 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 129059 sc-eQTL 4.34e-02 -0.336 0.165 0.942 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -436036 sc-eQTL 1.92e-01 -0.233 0.178 0.942 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -904141 sc-eQTL 6.83e-01 -0.0621 0.152 0.942 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -436230 sc-eQTL 5.98e-01 0.0644 0.122 0.942 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -205239 sc-eQTL 4.26e-01 -0.106 0.133 0.942 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 102978 sc-eQTL 8.04e-01 0.0371 0.149 0.942 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -784144 sc-eQTL 8.28e-01 -0.0247 0.113 0.942 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 142248 sc-eQTL 3.20e-01 0.171 0.172 0.942 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 129059 sc-eQTL 8.38e-01 0.0303 0.148 0.942 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000168528 \N -548813 3.53e-07 1.51e-07 5.64e-08 2.15e-07 1.01e-07 8.33e-08 2.16e-07 5.66e-08 1.5e-07 6.08e-08 1.59e-07 1.15e-07 1.95e-07 8e-08 5.82e-08 7.74e-08 4.31e-08 1.51e-07 7.09e-08 5.33e-08 1.25e-07 1.42e-07 1.58e-07 3.22e-08 1.85e-07 1.26e-07 1.17e-07 1.01e-07 1.34e-07 1.1e-07 1.06e-07 3.93e-08 3.68e-08 8.89e-08 2.97e-08 3.53e-08 4.41e-08 8.37e-08 6.41e-08 3.67e-08 5.87e-08 1.59e-07 3.13e-08 1.07e-08 3.41e-08 1.8e-08 8.74e-08 1.91e-09 5.04e-08