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Genes within 1Mb (chr1:30859402:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -437386 sc-eQTL 3.06e-01 0.0845 0.0823 0.588 B L1
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 8.30e-01 -0.0142 0.0661 0.588 B L1
ENSG00000134644 PUM1 -206589 sc-eQTL 4.51e-02 -0.111 0.0549 0.588 B L1
ENSG00000162510 MATN1 135817 sc-eQTL 8.16e-01 -0.0136 0.0583 0.588 B L1
ENSG00000162511 LAPTM5 101628 sc-eQTL 9.65e-01 0.00202 0.0457 0.588 B L1
ENSG00000162517 PEF1 -785494 sc-eQTL 2.05e-01 -0.0874 0.0687 0.588 B L1
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 4.82e-01 0.0376 0.0534 0.588 B L1
ENSG00000287510 AL137857.1 127709 sc-eQTL 3.85e-01 0.0551 0.0632 0.588 B L1
ENSG00000060688 SNRNP40 -437386 sc-eQTL 6.80e-01 0.0296 0.0717 0.588 CD4T L1
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 6.37e-01 0.0265 0.056 0.588 CD4T L1
ENSG00000134644 PUM1 -206589 sc-eQTL 3.06e-01 -0.051 0.0497 0.588 CD4T L1
ENSG00000162511 LAPTM5 101628 sc-eQTL 3.45e-01 0.0522 0.0551 0.588 CD4T L1
ENSG00000162517 PEF1 -785494 sc-eQTL 1.86e-01 -0.0764 0.0575 0.588 CD4T L1
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 7.14e-01 0.0181 0.0494 0.588 CD4T L1
ENSG00000287510 AL137857.1 127709 sc-eQTL 4.98e-01 0.0401 0.0591 0.588 CD4T L1
ENSG00000060688 SNRNP40 -437386 sc-eQTL 5.48e-01 0.0568 0.0943 0.588 CD8T L1
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 3.02e-01 0.0649 0.0627 0.588 CD8T L1
ENSG00000134644 PUM1 -206589 sc-eQTL 2.98e-02 -0.12 0.0547 0.588 CD8T L1
ENSG00000162511 LAPTM5 101628 sc-eQTL 9.94e-02 0.0884 0.0534 0.588 CD8T L1
ENSG00000162517 PEF1 -785494 sc-eQTL 9.56e-01 0.00368 0.0662 0.588 CD8T L1
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 4.32e-02 0.127 0.0624 0.588 CD8T L1
ENSG00000287510 AL137857.1 127709 sc-eQTL 9.36e-01 0.00635 0.0791 0.588 CD8T L1
ENSG00000060688 SNRNP40 -437386 sc-eQTL 5.52e-01 -0.0503 0.0845 0.583 DC L1
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 3.12e-01 -0.101 0.0998 0.583 DC L1
ENSG00000134644 PUM1 -206589 sc-eQTL 6.53e-01 -0.0353 0.0784 0.583 DC L1
ENSG00000162511 LAPTM5 101628 sc-eQTL 1.97e-01 0.0723 0.0558 0.583 DC L1
ENSG00000162517 PEF1 -785494 sc-eQTL 8.35e-01 0.019 0.0908 0.583 DC L1
ENSG00000168528 SERINC2 -550163 sc-eQTL 8.60e-01 -0.0164 0.0923 0.583 DC L1
ENSG00000284543 LINC01226 -646824 sc-eQTL 2.60e-01 0.0688 0.061 0.583 DC L1
ENSG00000287510 AL137857.1 127709 sc-eQTL 3.42e-01 0.0842 0.0884 0.583 DC L1
ENSG00000060688 SNRNP40 -437386 sc-eQTL 8.02e-01 0.0162 0.0643 0.588 Mono L1
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 3.68e-01 0.0718 0.0796 0.588 Mono L1
ENSG00000134644 PUM1 -206589 sc-eQTL 2.31e-01 0.0612 0.0509 0.588 Mono L1
ENSG00000162511 LAPTM5 101628 sc-eQTL 6.24e-01 0.0231 0.047 0.588 Mono L1
ENSG00000162512 SDC3 -49356 sc-eQTL 1.84e-02 -0.212 0.0892 0.588 Mono L1
ENSG00000162517 PEF1 -785494 sc-eQTL 9.50e-01 0.004 0.0634 0.588 Mono L1
ENSG00000168528 SERINC2 -550163 sc-eQTL 1.71e-01 0.133 0.0965 0.588 Mono L1
ENSG00000284543 LINC01226 -646824 sc-eQTL 7.37e-01 -0.0287 0.0854 0.588 Mono L1
ENSG00000287510 AL137857.1 127709 sc-eQTL 7.36e-01 0.0252 0.0746 0.588 Mono L1
ENSG00000060688 SNRNP40 -437386 sc-eQTL 2.54e-01 0.103 0.0899 0.588 NK L1
ENSG00000121753 ADGRB2 -905491 sc-eQTL 3.14e-01 0.0782 0.0775 0.588 NK L1
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 1.97e-01 -0.0795 0.0615 0.588 NK L1
ENSG00000134644 PUM1 -206589 sc-eQTL 5.11e-02 -0.126 0.0642 0.588 NK L1
ENSG00000162511 LAPTM5 101628 sc-eQTL 2.18e-01 0.0918 0.0742 0.588 NK L1
ENSG00000162517 PEF1 -785494 sc-eQTL 1.36e-01 0.081 0.0541 0.588 NK L1
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 5.09e-01 0.0553 0.0837 0.588 NK L1
ENSG00000287510 AL137857.1 127709 sc-eQTL 6.82e-02 0.141 0.0767 0.588 NK L1
ENSG00000060688 SNRNP40 -437386 sc-eQTL 6.41e-01 -0.0318 0.0681 0.588 Other_T L1
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 1.64e-01 -0.101 0.0725 0.588 Other_T L1
ENSG00000134644 PUM1 -206589 sc-eQTL 4.94e-01 -0.0448 0.0654 0.588 Other_T L1
ENSG00000162511 LAPTM5 101628 sc-eQTL 8.32e-01 -0.0114 0.0537 0.588 Other_T L1
ENSG00000162517 PEF1 -785494 sc-eQTL 7.71e-01 0.0209 0.0717 0.588 Other_T L1
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 8.27e-02 0.152 0.0873 0.588 Other_T L1
ENSG00000287510 AL137857.1 127709 sc-eQTL 2.09e-01 -0.115 0.0912 0.588 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -437386 sc-eQTL 7.14e-01 0.0413 0.112 0.579 B_Activated L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 3.92e-01 0.0971 0.113 0.579 B_Activated L2
ENSG00000134644 PUM1 -206589 sc-eQTL 1.10e-02 -0.266 0.103 0.579 B_Activated L2
ENSG00000162510 MATN1 135817 sc-eQTL 7.30e-01 -0.0318 0.0921 0.579 B_Activated L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 9.41e-01 -0.00478 0.0642 0.579 B_Activated L2
ENSG00000162517 PEF1 -785494 sc-eQTL 3.53e-01 -0.102 0.109 0.579 B_Activated L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 9.94e-01 -0.000754 0.104 0.579 B_Activated L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 5.73e-01 -0.0517 0.0917 0.579 B_Activated L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 8.89e-01 -0.0142 0.101 0.588 B_Intermediate L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 3.57e-01 -0.0779 0.0844 0.588 B_Intermediate L2
ENSG00000134644 PUM1 -206589 sc-eQTL 5.84e-01 -0.0437 0.0797 0.588 B_Intermediate L2
ENSG00000162510 MATN1 135817 sc-eQTL 8.23e-01 -0.0186 0.083 0.588 B_Intermediate L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 7.25e-01 -0.0179 0.0509 0.588 B_Intermediate L2
ENSG00000162517 PEF1 -785494 sc-eQTL 8.54e-01 -0.0175 0.0946 0.588 B_Intermediate L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 9.46e-01 0.00486 0.0715 0.588 B_Intermediate L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 8.43e-02 0.138 0.0794 0.588 B_Intermediate L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 8.35e-01 -0.021 0.1 0.586 B_Memory L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 7.11e-01 0.0343 0.0922 0.586 B_Memory L2
ENSG00000134644 PUM1 -206589 sc-eQTL 6.48e-01 -0.0368 0.0803 0.586 B_Memory L2
ENSG00000162510 MATN1 135817 sc-eQTL 9.02e-01 -0.00943 0.0768 0.586 B_Memory L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 7.64e-01 -0.0205 0.0681 0.586 B_Memory L2
ENSG00000162517 PEF1 -785494 sc-eQTL 7.43e-01 0.0298 0.0909 0.586 B_Memory L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 7.12e-01 0.0288 0.0779 0.586 B_Memory L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 9.05e-01 0.0109 0.0913 0.586 B_Memory L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 7.49e-02 0.161 0.0897 0.588 B_Naive1 L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 9.19e-01 0.00796 0.078 0.588 B_Naive1 L2
ENSG00000134644 PUM1 -206589 sc-eQTL 1.42e-01 -0.101 0.0685 0.588 B_Naive1 L2
ENSG00000162510 MATN1 135817 sc-eQTL 6.43e-01 0.0324 0.0698 0.588 B_Naive1 L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 8.82e-01 0.00694 0.0467 0.588 B_Naive1 L2
ENSG00000162517 PEF1 -785494 sc-eQTL 2.52e-01 0.0941 0.082 0.588 B_Naive1 L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 4.49e-01 0.0464 0.0612 0.588 B_Naive1 L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 7.43e-01 -0.0248 0.0757 0.588 B_Naive1 L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 8.85e-01 -0.0141 0.0971 0.588 B_Naive2 L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 5.51e-01 -0.0479 0.0801 0.588 B_Naive2 L2
ENSG00000134644 PUM1 -206589 sc-eQTL 8.02e-01 -0.0197 0.0784 0.588 B_Naive2 L2
ENSG00000162510 MATN1 135817 sc-eQTL 8.43e-01 -0.0149 0.0753 0.588 B_Naive2 L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 9.65e-01 0.00222 0.0511 0.588 B_Naive2 L2
ENSG00000162517 PEF1 -785494 sc-eQTL 1.63e-01 -0.13 0.0926 0.588 B_Naive2 L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 6.88e-01 0.0299 0.0744 0.588 B_Naive2 L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 5.60e-01 0.047 0.0803 0.588 B_Naive2 L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 5.87e-01 -0.0517 0.095 0.584 CD4_CTL L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 7.09e-02 -0.168 0.0928 0.584 CD4_CTL L2
ENSG00000134644 PUM1 -206589 sc-eQTL 5.91e-01 0.0494 0.0917 0.584 CD4_CTL L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 1.70e-01 0.112 0.0814 0.584 CD4_CTL L2
ENSG00000162517 PEF1 -785494 sc-eQTL 4.85e-01 -0.0585 0.0837 0.584 CD4_CTL L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 7.88e-01 -0.024 0.0894 0.584 CD4_CTL L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 2.15e-01 0.0978 0.0786 0.584 CD4_CTL L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 4.88e-01 -0.052 0.0749 0.588 CD4_Naive L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 3.35e-01 0.0641 0.0663 0.588 CD4_Naive L2
ENSG00000134644 PUM1 -206589 sc-eQTL 5.73e-02 -0.101 0.0526 0.588 CD4_Naive L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 4.70e-01 0.0411 0.0568 0.588 CD4_Naive L2
ENSG00000162517 PEF1 -785494 sc-eQTL 3.17e-01 -0.0624 0.0622 0.588 CD4_Naive L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 8.31e-01 -0.0123 0.0577 0.588 CD4_Naive L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 8.16e-01 0.0154 0.0663 0.588 CD4_Naive L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 3.41e-01 0.0895 0.0938 0.588 CD4_TCM L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 7.49e-01 -0.0243 0.0758 0.588 CD4_TCM L2
ENSG00000134644 PUM1 -206589 sc-eQTL 1.06e-01 0.108 0.0667 0.588 CD4_TCM L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 9.66e-01 0.0024 0.0557 0.588 CD4_TCM L2
ENSG00000162517 PEF1 -785494 sc-eQTL 6.62e-01 0.0326 0.0746 0.588 CD4_TCM L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 5.36e-01 0.0437 0.0706 0.588 CD4_TCM L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 2.07e-01 0.0993 0.0784 0.588 CD4_TCM L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 6.67e-01 0.0406 0.094 0.588 CD4_TEM L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 3.14e-01 -0.0902 0.0894 0.588 CD4_TEM L2
ENSG00000134644 PUM1 -206589 sc-eQTL 9.49e-01 0.00474 0.0747 0.588 CD4_TEM L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 4.06e-01 0.0627 0.0754 0.588 CD4_TEM L2
ENSG00000162517 PEF1 -785494 sc-eQTL 7.54e-01 -0.0266 0.0846 0.588 CD4_TEM L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 6.58e-01 0.0391 0.0883 0.588 CD4_TEM L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 8.51e-01 0.0164 0.087 0.588 CD4_TEM L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 6.00e-01 0.0537 0.102 0.588 CD8_CTL L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 3.88e-01 0.0677 0.0783 0.588 CD8_CTL L2
ENSG00000134644 PUM1 -206589 sc-eQTL 5.28e-01 -0.0481 0.0761 0.588 CD8_CTL L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 2.07e-01 0.106 0.0841 0.588 CD8_CTL L2
ENSG00000162517 PEF1 -785494 sc-eQTL 4.41e-01 -0.0566 0.0734 0.588 CD8_CTL L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 1.53e-01 0.126 0.0883 0.588 CD8_CTL L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 8.95e-01 0.011 0.0834 0.588 CD8_CTL L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 5.16e-01 0.061 0.0937 0.588 CD8_Naive L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 8.78e-01 0.0124 0.0809 0.588 CD8_Naive L2
ENSG00000134644 PUM1 -206589 sc-eQTL 8.69e-02 -0.111 0.0646 0.588 CD8_Naive L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 8.10e-01 -0.015 0.0624 0.588 CD8_Naive L2
ENSG00000162517 PEF1 -785494 sc-eQTL 6.53e-01 0.039 0.0867 0.588 CD8_Naive L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 4.28e-01 0.0617 0.0777 0.588 CD8_Naive L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 2.46e-01 0.0982 0.0845 0.588 CD8_Naive L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 5.35e-01 0.0648 0.104 0.597 CD8_TCM L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 7.39e-01 0.032 0.0957 0.597 CD8_TCM L2
ENSG00000134644 PUM1 -206589 sc-eQTL 5.66e-01 0.0518 0.0899 0.597 CD8_TCM L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 1.52e-01 0.135 0.0937 0.597 CD8_TCM L2
ENSG00000162517 PEF1 -785494 sc-eQTL 9.83e-01 -0.00211 0.0963 0.597 CD8_TCM L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 9.29e-01 0.00778 0.0872 0.597 CD8_TCM L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 7.63e-01 0.0266 0.0881 0.597 CD8_TCM L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 5.42e-01 0.0605 0.0989 0.591 CD8_TEM L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 4.00e-01 -0.08 0.0947 0.591 CD8_TEM L2
ENSG00000134644 PUM1 -206589 sc-eQTL 8.50e-01 0.0184 0.097 0.591 CD8_TEM L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 7.96e-01 0.0236 0.0912 0.591 CD8_TEM L2
ENSG00000162517 PEF1 -785494 sc-eQTL 7.89e-01 0.023 0.0859 0.591 CD8_TEM L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 3.09e-01 0.0963 0.0944 0.591 CD8_TEM L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 2.06e-01 -0.108 0.0853 0.591 CD8_TEM L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 1.22e-01 -0.154 0.0989 0.587 MAIT L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 4.52e-01 -0.0664 0.088 0.587 MAIT L2
ENSG00000134644 PUM1 -206589 sc-eQTL 1.51e-01 -0.121 0.0841 0.587 MAIT L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 4.38e-01 0.0619 0.0796 0.587 MAIT L2
ENSG00000162517 PEF1 -785494 sc-eQTL 7.76e-01 0.025 0.0876 0.587 MAIT L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 6.84e-04 0.298 0.0863 0.587 MAIT L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 3.22e-01 -0.0907 0.0913 0.587 MAIT L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 5.16e-01 0.0658 0.101 0.587 NK_CD56bright L2
ENSG00000121753 ADGRB2 -905491 sc-eQTL 9.32e-01 -0.0068 0.0793 0.587 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 1.20e-01 -0.133 0.0851 0.587 NK_CD56bright L2
ENSG00000134644 PUM1 -206589 sc-eQTL 4.50e-01 0.068 0.0898 0.587 NK_CD56bright L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 8.90e-01 0.0123 0.0887 0.587 NK_CD56bright L2
ENSG00000162517 PEF1 -785494 sc-eQTL 8.49e-02 0.148 0.0855 0.587 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 8.66e-02 -0.152 0.0885 0.587 NK_CD56bright L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 3.27e-01 -0.0861 0.0876 0.587 NK_CD56bright L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 6.81e-01 0.0394 0.0956 0.588 NK_CD56dim L2
ENSG00000121753 ADGRB2 -905491 sc-eQTL 6.07e-01 0.0433 0.0841 0.588 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 2.41e-01 -0.083 0.0705 0.588 NK_CD56dim L2
ENSG00000134644 PUM1 -206589 sc-eQTL 7.25e-01 -0.0255 0.0726 0.588 NK_CD56dim L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 3.85e-01 0.0673 0.0773 0.588 NK_CD56dim L2
ENSG00000162517 PEF1 -785494 sc-eQTL 9.97e-02 0.113 0.0684 0.588 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 5.12e-01 0.0637 0.0969 0.588 NK_CD56dim L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 1.72e-02 0.19 0.0789 0.588 NK_CD56dim L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 5.87e-01 0.0552 0.101 0.573 NK_HLA L2
ENSG00000121753 ADGRB2 -905491 sc-eQTL 4.52e-01 0.0606 0.0804 0.573 NK_HLA L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 8.24e-01 0.0202 0.0906 0.573 NK_HLA L2
ENSG00000134644 PUM1 -206589 sc-eQTL 2.37e-01 -0.104 0.0879 0.573 NK_HLA L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 4.44e-01 0.0645 0.0841 0.573 NK_HLA L2
ENSG00000162517 PEF1 -785494 sc-eQTL 2.84e-01 -0.102 0.0946 0.573 NK_HLA L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 1.67e-01 0.124 0.0892 0.573 NK_HLA L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 1.20e-02 0.216 0.0853 0.573 NK_HLA L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 4.84e-01 0.0661 0.0942 0.588 NK_cytokine L2
ENSG00000121753 ADGRB2 -905491 sc-eQTL 2.06e-01 0.108 0.0849 0.588 NK_cytokine L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 6.50e-01 -0.0334 0.0736 0.588 NK_cytokine L2
ENSG00000134644 PUM1 -206589 sc-eQTL 2.37e-03 -0.24 0.0778 0.588 NK_cytokine L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 5.72e-01 0.0495 0.0876 0.588 NK_cytokine L2
ENSG00000162517 PEF1 -785494 sc-eQTL 7.84e-01 -0.0205 0.0747 0.588 NK_cytokine L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 6.41e-01 0.0434 0.0928 0.588 NK_cytokine L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 2.86e-01 0.0921 0.0862 0.588 NK_cytokine L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 1.10e-01 0.188 0.117 0.596 PB L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 4.70e-01 -0.099 0.137 0.596 PB L2
ENSG00000134644 PUM1 -206589 sc-eQTL 6.01e-01 -0.0622 0.119 0.596 PB L2
ENSG00000162510 MATN1 135817 sc-eQTL 7.06e-01 -0.0419 0.111 0.596 PB L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 9.38e-01 -0.0062 0.0792 0.596 PB L2
ENSG00000162517 PEF1 -785494 sc-eQTL 1.60e-01 0.171 0.121 0.596 PB L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 6.05e-01 0.0561 0.108 0.596 PB L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 3.98e-02 -0.235 0.113 0.596 PB L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 4.87e-01 0.0508 0.0729 0.589 Pro_T L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 4.02e-01 -0.0777 0.0925 0.589 Pro_T L2
ENSG00000134644 PUM1 -206589 sc-eQTL 6.42e-01 0.0402 0.0863 0.589 Pro_T L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 4.06e-01 -0.0515 0.0619 0.589 Pro_T L2
ENSG00000162517 PEF1 -785494 sc-eQTL 2.58e-01 -0.103 0.0907 0.589 Pro_T L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 3.45e-01 -0.0818 0.0864 0.589 Pro_T L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 2.48e-01 -0.0921 0.0794 0.589 Pro_T L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 2.14e-01 0.121 0.0967 0.588 Treg L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 9.51e-01 -0.00573 0.0939 0.588 Treg L2
ENSG00000134644 PUM1 -206589 sc-eQTL 6.88e-01 -0.0302 0.0751 0.588 Treg L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 6.75e-01 0.0361 0.086 0.588 Treg L2
ENSG00000162517 PEF1 -785494 sc-eQTL 6.60e-01 -0.041 0.0929 0.588 Treg L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 1.72e-01 0.12 0.0873 0.588 Treg L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 7.60e-01 -0.0268 0.0876 0.588 Treg L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 8.81e-01 0.0147 0.0982 0.583 cDC L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 9.03e-01 0.0129 0.106 0.583 cDC L2
ENSG00000134644 PUM1 -206589 sc-eQTL 4.45e-01 0.0698 0.0912 0.583 cDC L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 4.69e-01 0.0463 0.0639 0.583 cDC L2
ENSG00000162517 PEF1 -785494 sc-eQTL 9.01e-01 -0.0116 0.0927 0.583 cDC L2
ENSG00000168528 SERINC2 -550163 sc-eQTL 5.16e-01 0.0535 0.0821 0.583 cDC L2
ENSG00000284543 LINC01226 -646824 sc-eQTL 8.95e-01 -0.0106 0.0808 0.583 cDC L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 3.74e-01 0.0773 0.0868 0.583 cDC L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 4.68e-01 0.0562 0.0773 0.588 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 9.83e-01 0.00188 0.0863 0.588 cMono_IL1B L2
ENSG00000134644 PUM1 -206589 sc-eQTL 6.66e-02 0.107 0.0579 0.588 cMono_IL1B L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 5.55e-01 0.0303 0.0512 0.588 cMono_IL1B L2
ENSG00000162512 SDC3 -49356 sc-eQTL 4.28e-02 -0.195 0.0956 0.588 cMono_IL1B L2
ENSG00000162517 PEF1 -785494 sc-eQTL 9.70e-01 -0.00299 0.0789 0.588 cMono_IL1B L2
ENSG00000168528 SERINC2 -550163 sc-eQTL 1.54e-01 0.139 0.0973 0.588 cMono_IL1B L2
ENSG00000284543 LINC01226 -646824 sc-eQTL 8.21e-01 -0.0195 0.0864 0.588 cMono_IL1B L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 7.12e-02 0.145 0.08 0.588 cMono_IL1B L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 4.77e-01 0.0578 0.0813 0.588 cMono_S100A L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 6.81e-01 0.0395 0.0961 0.588 cMono_S100A L2
ENSG00000134644 PUM1 -206589 sc-eQTL 4.76e-02 0.137 0.0688 0.588 cMono_S100A L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 9.48e-01 0.00348 0.0534 0.588 cMono_S100A L2
ENSG00000162512 SDC3 -49356 sc-eQTL 5.46e-01 -0.0557 0.0922 0.588 cMono_S100A L2
ENSG00000162517 PEF1 -785494 sc-eQTL 3.57e-01 -0.0767 0.0831 0.588 cMono_S100A L2
ENSG00000168528 SERINC2 -550163 sc-eQTL 1.51e-01 0.14 0.0972 0.588 cMono_S100A L2
ENSG00000284543 LINC01226 -646824 sc-eQTL 7.11e-01 -0.0294 0.0793 0.588 cMono_S100A L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 3.06e-01 -0.0815 0.0795 0.588 cMono_S100A L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 7.13e-01 -0.0456 0.124 0.618 gdT L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 9.76e-01 0.00325 0.106 0.618 gdT L2
ENSG00000134644 PUM1 -206589 sc-eQTL 9.07e-01 0.0128 0.11 0.618 gdT L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 6.84e-01 0.0486 0.119 0.618 gdT L2
ENSG00000162517 PEF1 -785494 sc-eQTL 7.04e-01 0.0416 0.109 0.618 gdT L2
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 5.62e-01 -0.0638 0.11 0.618 gdT L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 8.20e-01 -0.0243 0.107 0.618 gdT L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 8.47e-01 -0.0175 0.0908 0.593 intMono L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 8.17e-02 0.17 0.0969 0.593 intMono L2
ENSG00000134644 PUM1 -206589 sc-eQTL 4.74e-01 -0.0594 0.0827 0.593 intMono L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 3.49e-01 0.0609 0.0648 0.593 intMono L2
ENSG00000162512 SDC3 -49356 sc-eQTL 4.53e-01 -0.0667 0.0889 0.593 intMono L2
ENSG00000162517 PEF1 -785494 sc-eQTL 1.56e-02 0.225 0.0921 0.593 intMono L2
ENSG00000168528 SERINC2 -550163 sc-eQTL 8.66e-02 0.159 0.0925 0.593 intMono L2
ENSG00000284543 LINC01226 -646824 sc-eQTL 1.81e-01 -0.118 0.0879 0.593 intMono L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 7.52e-02 0.157 0.0876 0.593 intMono L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 6.80e-01 -0.0347 0.0841 0.586 ncMono L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 2.28e-01 0.108 0.0894 0.586 ncMono L2
ENSG00000134644 PUM1 -206589 sc-eQTL 2.42e-01 -0.0856 0.073 0.586 ncMono L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 5.81e-01 0.0368 0.0665 0.586 ncMono L2
ENSG00000162512 SDC3 -49356 sc-eQTL 5.00e-02 -0.146 0.0739 0.586 ncMono L2
ENSG00000162517 PEF1 -785494 sc-eQTL 4.90e-01 0.0592 0.0855 0.586 ncMono L2
ENSG00000168528 SERINC2 -550163 sc-eQTL 5.19e-01 0.0526 0.0814 0.586 ncMono L2
ENSG00000284543 LINC01226 -646824 sc-eQTL 4.08e-01 0.0674 0.0812 0.586 ncMono L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 4.10e-01 -0.0695 0.0842 0.586 ncMono L2
ENSG00000060688 SNRNP40 -437386 sc-eQTL 5.49e-01 -0.0574 0.0955 0.579 pDC L2
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 5.52e-01 -0.0625 0.105 0.579 pDC L2
ENSG00000134644 PUM1 -206589 sc-eQTL 3.73e-01 -0.0774 0.0867 0.579 pDC L2
ENSG00000162511 LAPTM5 101628 sc-eQTL 7.53e-01 0.0255 0.0808 0.579 pDC L2
ENSG00000162517 PEF1 -785494 sc-eQTL 4.83e-01 -0.0736 0.105 0.579 pDC L2
ENSG00000168528 SERINC2 -550163 sc-eQTL 7.40e-01 -0.0326 0.098 0.579 pDC L2
ENSG00000284543 LINC01226 -646824 sc-eQTL 5.23e-01 0.0486 0.076 0.579 pDC L2
ENSG00000287510 AL137857.1 127709 sc-eQTL 7.57e-02 0.158 0.0886 0.579 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -437386 sc-eQTL 7.64e-01 -0.029 0.0963 0.588 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 9.32e-01 -0.00686 0.0801 0.588 B_Memory LOneK1K
ENSG00000134644 PUM1 -206589 sc-eQTL 1.34e-01 -0.106 0.0706 0.588 B_Memory LOneK1K
ENSG00000162510 MATN1 135817 sc-eQTL 7.00e-01 -0.0312 0.0809 0.588 B_Memory LOneK1K
ENSG00000162511 LAPTM5 101628 sc-eQTL 7.64e-01 -0.0153 0.0509 0.588 B_Memory LOneK1K
ENSG00000162517 PEF1 -785494 sc-eQTL 8.05e-01 -0.0208 0.0843 0.588 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 8.99e-01 0.00852 0.0673 0.588 B_Memory LOneK1K
ENSG00000287510 AL137857.1 127709 sc-eQTL 2.24e-01 0.0892 0.0731 0.588 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -437386 sc-eQTL 1.69e-01 0.121 0.0875 0.588 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 8.97e-01 -0.00899 0.0695 0.588 B_Naive LOneK1K
ENSG00000134644 PUM1 -206589 sc-eQTL 1.50e-01 -0.0944 0.0654 0.588 B_Naive LOneK1K
ENSG00000162510 MATN1 135817 sc-eQTL 9.94e-01 0.000513 0.0633 0.588 B_Naive LOneK1K
ENSG00000162511 LAPTM5 101628 sc-eQTL 5.27e-01 0.0282 0.0445 0.588 B_Naive LOneK1K
ENSG00000162517 PEF1 -785494 sc-eQTL 8.47e-01 0.0157 0.0813 0.588 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 7.16e-01 0.021 0.0575 0.588 B_Naive LOneK1K
ENSG00000287510 AL137857.1 127709 sc-eQTL 7.13e-01 0.0252 0.0683 0.588 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -437386 sc-eQTL 3.31e-01 0.0715 0.0735 0.588 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 7.29e-01 0.0289 0.0833 0.588 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -206589 sc-eQTL 2.96e-02 0.115 0.0526 0.588 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 101628 sc-eQTL 5.21e-01 0.03 0.0467 0.588 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -49356 sc-eQTL 5.08e-02 -0.186 0.0945 0.588 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -785494 sc-eQTL 3.23e-01 -0.0663 0.0669 0.588 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -550163 sc-eQTL 1.55e-01 0.139 0.0976 0.588 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -646824 sc-eQTL 9.35e-01 -0.00652 0.0804 0.588 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 127709 sc-eQTL 4.34e-01 0.0589 0.0752 0.588 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -437386 sc-eQTL 3.47e-01 -0.0758 0.0804 0.588 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 2.84e-02 0.192 0.0872 0.588 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -206589 sc-eQTL 1.47e-01 -0.105 0.0719 0.588 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 101628 sc-eQTL 7.45e-01 0.0188 0.0578 0.588 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -49356 sc-eQTL 5.13e-02 -0.164 0.0837 0.588 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -785494 sc-eQTL 5.86e-02 0.145 0.0761 0.588 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -550163 sc-eQTL 5.30e-01 0.055 0.0875 0.588 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -646824 sc-eQTL 7.21e-01 0.0297 0.0831 0.588 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 127709 sc-eQTL 6.16e-01 -0.0418 0.0832 0.588 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -437386 sc-eQTL 3.60e-01 0.0835 0.091 0.588 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -905491 sc-eQTL 2.48e-01 0.0896 0.0774 0.588 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -437580 sc-eQTL 4.23e-01 -0.0499 0.0622 0.588 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -206589 sc-eQTL 3.53e-02 -0.143 0.0675 0.588 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 101628 sc-eQTL 4.00e-01 0.0642 0.0762 0.588 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -785494 sc-eQTL 4.67e-01 0.0421 0.0579 0.588 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 140898 sc-eQTL 2.68e-01 0.0974 0.0877 0.588 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 127709 sc-eQTL 8.67e-03 0.198 0.0747 0.588 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -437580 eQTL 4.63e-02 0.0343 0.0172 0.0 0.0 0.455
ENSG00000162511 LAPTM5 101628 eQTL 0.0353 0.0204 0.00967 0.0 0.0 0.455

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -437580 7.87e-07 5.18e-07 1.05e-07 3.99e-07 1.09e-07 1.64e-07 4.93e-07 7.65e-08 2.75e-07 1.65e-07 4.3e-07 2.49e-07 6.08e-07 1.1e-07 2.07e-07 1.26e-07 2.11e-07 3.02e-07 1.77e-07 1.17e-07 1.61e-07 2.48e-07 2.81e-07 1.13e-07 5.15e-07 1.9e-07 2.43e-07 1.7e-07 2.31e-07 4.72e-07 1.95e-07 5.88e-08 5.86e-08 1.21e-07 1.83e-07 6.94e-08 1.03e-07 7.75e-08 6.63e-08 2.24e-08 3.31e-08 3.73e-07 6.75e-08 1.06e-08 1.16e-07 8.07e-09 9.84e-08 0.0 5.49e-08