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Genes within 1Mb (chr1:30855819:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -440969 sc-eQTL 8.62e-02 -0.145 0.0839 0.344 B L1
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 9.95e-01 0.000462 0.0676 0.344 B L1
ENSG00000134644 PUM1 -210172 sc-eQTL 7.46e-02 0.101 0.0563 0.344 B L1
ENSG00000162510 MATN1 132234 sc-eQTL 4.61e-01 0.044 0.0596 0.344 B L1
ENSG00000162511 LAPTM5 98045 sc-eQTL 5.99e-01 0.0246 0.0467 0.344 B L1
ENSG00000162517 PEF1 -789077 sc-eQTL 8.23e-02 0.122 0.07 0.344 B L1
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 7.53e-01 -0.0173 0.0547 0.344 B L1
ENSG00000287510 AL137857.1 124126 sc-eQTL 6.04e-01 -0.0336 0.0648 0.344 B L1
ENSG00000060688 SNRNP40 -440969 sc-eQTL 4.37e-01 -0.0563 0.0723 0.344 CD4T L1
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 4.49e-01 -0.0428 0.0565 0.344 CD4T L1
ENSG00000134644 PUM1 -210172 sc-eQTL 5.88e-01 0.0273 0.0503 0.344 CD4T L1
ENSG00000162511 LAPTM5 98045 sc-eQTL 3.68e-01 -0.0503 0.0557 0.344 CD4T L1
ENSG00000162517 PEF1 -789077 sc-eQTL 9.95e-02 0.0959 0.058 0.344 CD4T L1
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 5.24e-01 -0.0318 0.0499 0.344 CD4T L1
ENSG00000287510 AL137857.1 124126 sc-eQTL 6.78e-01 -0.0248 0.0598 0.344 CD4T L1
ENSG00000060688 SNRNP40 -440969 sc-eQTL 9.62e-01 -0.00453 0.0951 0.344 CD8T L1
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 1.15e-01 -0.0997 0.0629 0.344 CD8T L1
ENSG00000134644 PUM1 -210172 sc-eQTL 1.73e-02 0.132 0.055 0.344 CD8T L1
ENSG00000162511 LAPTM5 98045 sc-eQTL 5.26e-01 -0.0344 0.0541 0.344 CD8T L1
ENSG00000162517 PEF1 -789077 sc-eQTL 9.71e-01 -0.00244 0.0667 0.344 CD8T L1
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 2.06e-01 -0.0802 0.0632 0.344 CD8T L1
ENSG00000287510 AL137857.1 124126 sc-eQTL 7.49e-01 -0.0255 0.0797 0.344 CD8T L1
ENSG00000060688 SNRNP40 -440969 sc-eQTL 2.42e-01 0.101 0.0863 0.345 DC L1
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 1.38e-01 0.152 0.102 0.345 DC L1
ENSG00000134644 PUM1 -210172 sc-eQTL 2.78e-01 0.0872 0.0801 0.345 DC L1
ENSG00000162511 LAPTM5 98045 sc-eQTL 2.61e-01 -0.0645 0.0572 0.345 DC L1
ENSG00000162517 PEF1 -789077 sc-eQTL 9.71e-01 0.00344 0.093 0.345 DC L1
ENSG00000168528 SERINC2 -553746 sc-eQTL 5.99e-01 0.0497 0.0945 0.345 DC L1
ENSG00000284543 LINC01226 -650407 sc-eQTL 1.89e-01 -0.0822 0.0624 0.345 DC L1
ENSG00000287510 AL137857.1 124126 sc-eQTL 7.99e-01 0.0231 0.0907 0.345 DC L1
ENSG00000060688 SNRNP40 -440969 sc-eQTL 2.59e-01 0.0735 0.0649 0.344 Mono L1
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 1.94e-02 -0.188 0.0797 0.344 Mono L1
ENSG00000134644 PUM1 -210172 sc-eQTL 1.75e-01 -0.07 0.0515 0.344 Mono L1
ENSG00000162511 LAPTM5 98045 sc-eQTL 8.02e-01 -0.0119 0.0476 0.344 Mono L1
ENSG00000162512 SDC3 -52939 sc-eQTL 2.89e-01 0.0969 0.0912 0.344 Mono L1
ENSG00000162517 PEF1 -789077 sc-eQTL 2.36e-01 0.076 0.0639 0.344 Mono L1
ENSG00000168528 SERINC2 -553746 sc-eQTL 2.96e-01 0.102 0.0979 0.344 Mono L1
ENSG00000284543 LINC01226 -650407 sc-eQTL 9.38e-01 0.00673 0.0864 0.344 Mono L1
ENSG00000287510 AL137857.1 124126 sc-eQTL 6.73e-01 -0.032 0.0755 0.344 Mono L1
ENSG00000060688 SNRNP40 -440969 sc-eQTL 5.64e-01 -0.0529 0.0915 0.343 NK L1
ENSG00000121753 ADGRB2 -909074 sc-eQTL 6.44e-01 0.0364 0.0788 0.343 NK L1
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 2.42e-01 0.0733 0.0624 0.343 NK L1
ENSG00000134644 PUM1 -210172 sc-eQTL 1.14e-02 0.165 0.0647 0.343 NK L1
ENSG00000162511 LAPTM5 98045 sc-eQTL 8.90e-01 -0.0105 0.0756 0.343 NK L1
ENSG00000162517 PEF1 -789077 sc-eQTL 1.54e-01 -0.0787 0.0549 0.343 NK L1
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 4.84e-01 -0.0596 0.0849 0.343 NK L1
ENSG00000287510 AL137857.1 124126 sc-eQTL 3.29e-01 -0.0765 0.0783 0.343 NK L1
ENSG00000060688 SNRNP40 -440969 sc-eQTL 2.65e-01 0.077 0.0689 0.344 Other_T L1
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 1.95e-01 0.0956 0.0736 0.344 Other_T L1
ENSG00000134644 PUM1 -210172 sc-eQTL 7.27e-01 -0.0232 0.0664 0.344 Other_T L1
ENSG00000162511 LAPTM5 98045 sc-eQTL 8.98e-01 -0.007 0.0544 0.344 Other_T L1
ENSG00000162517 PEF1 -789077 sc-eQTL 7.70e-01 -0.0213 0.0727 0.344 Other_T L1
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 7.70e-01 0.0261 0.0891 0.344 Other_T L1
ENSG00000287510 AL137857.1 124126 sc-eQTL 5.37e-01 0.0574 0.0927 0.344 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -440969 sc-eQTL 9.57e-01 0.0061 0.113 0.342 B_Activated L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 1.77e-01 -0.154 0.114 0.342 B_Activated L2
ENSG00000134644 PUM1 -210172 sc-eQTL 1.31e-01 0.16 0.105 0.342 B_Activated L2
ENSG00000162510 MATN1 132234 sc-eQTL 5.48e-01 -0.0558 0.0927 0.342 B_Activated L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 9.55e-01 -0.00362 0.0647 0.342 B_Activated L2
ENSG00000162517 PEF1 -789077 sc-eQTL 2.05e-01 0.14 0.11 0.342 B_Activated L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 8.89e-01 -0.0146 0.104 0.342 B_Activated L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 1.60e-01 0.13 0.0919 0.342 B_Activated L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 7.23e-01 -0.037 0.104 0.343 B_Intermediate L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 5.29e-01 0.0547 0.0868 0.343 B_Intermediate L2
ENSG00000134644 PUM1 -210172 sc-eQTL 3.83e-01 0.0716 0.0818 0.343 B_Intermediate L2
ENSG00000162510 MATN1 132234 sc-eQTL 3.87e-01 0.0738 0.0852 0.343 B_Intermediate L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 4.08e-01 0.0434 0.0523 0.343 B_Intermediate L2
ENSG00000162517 PEF1 -789077 sc-eQTL 4.94e-01 0.0666 0.0971 0.343 B_Intermediate L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 9.58e-01 0.00388 0.0735 0.343 B_Intermediate L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 4.57e-01 -0.0612 0.0821 0.343 B_Intermediate L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 5.97e-01 -0.0536 0.101 0.347 B_Memory L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 3.40e-01 -0.0888 0.0929 0.347 B_Memory L2
ENSG00000134644 PUM1 -210172 sc-eQTL 6.26e-01 -0.0396 0.081 0.347 B_Memory L2
ENSG00000162510 MATN1 132234 sc-eQTL 9.72e-01 0.00275 0.0776 0.347 B_Memory L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 6.94e-01 -0.0271 0.0687 0.347 B_Memory L2
ENSG00000162517 PEF1 -789077 sc-eQTL 6.82e-01 0.0377 0.0918 0.347 B_Memory L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 9.83e-01 -0.00172 0.0787 0.347 B_Memory L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 5.91e-01 0.0495 0.0921 0.347 B_Memory L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 8.95e-02 -0.156 0.0915 0.344 B_Naive1 L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 6.77e-01 0.0332 0.0795 0.344 B_Naive1 L2
ENSG00000134644 PUM1 -210172 sc-eQTL 9.37e-02 0.117 0.0697 0.344 B_Naive1 L2
ENSG00000162510 MATN1 132234 sc-eQTL 6.60e-01 -0.0313 0.0712 0.344 B_Naive1 L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 5.69e-01 0.0271 0.0475 0.344 B_Naive1 L2
ENSG00000162517 PEF1 -789077 sc-eQTL 3.65e-01 -0.076 0.0837 0.344 B_Naive1 L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 3.27e-01 -0.0612 0.0623 0.344 B_Naive1 L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 5.74e-01 -0.0434 0.0771 0.344 B_Naive1 L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 2.57e-01 0.113 0.099 0.345 B_Naive2 L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 3.42e-01 0.0779 0.0818 0.345 B_Naive2 L2
ENSG00000134644 PUM1 -210172 sc-eQTL 9.12e-01 0.00892 0.0802 0.345 B_Naive2 L2
ENSG00000162510 MATN1 132234 sc-eQTL 4.93e-01 0.0529 0.0769 0.345 B_Naive2 L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 9.02e-01 0.00646 0.0523 0.345 B_Naive2 L2
ENSG00000162517 PEF1 -789077 sc-eQTL 3.05e-01 0.0977 0.0949 0.345 B_Naive2 L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 5.99e-01 0.0401 0.0761 0.345 B_Naive2 L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 2.33e-01 -0.098 0.082 0.345 B_Naive2 L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 5.25e-01 0.0624 0.098 0.348 CD4_CTL L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 6.81e-01 -0.0397 0.0964 0.348 CD4_CTL L2
ENSG00000134644 PUM1 -210172 sc-eQTL 3.04e-01 -0.0972 0.0943 0.348 CD4_CTL L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 8.25e-01 -0.0187 0.0843 0.348 CD4_CTL L2
ENSG00000162517 PEF1 -789077 sc-eQTL 3.60e-01 0.0791 0.0862 0.348 CD4_CTL L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 5.61e-01 0.0537 0.0921 0.348 CD4_CTL L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 5.46e-01 -0.0492 0.0813 0.348 CD4_CTL L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 7.54e-01 0.0237 0.0754 0.344 CD4_Naive L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 1.95e-01 -0.0865 0.0666 0.344 CD4_Naive L2
ENSG00000134644 PUM1 -210172 sc-eQTL 2.61e-01 0.06 0.0532 0.344 CD4_Naive L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 3.05e-01 -0.0587 0.0571 0.344 CD4_Naive L2
ENSG00000162517 PEF1 -789077 sc-eQTL 2.29e-01 0.0755 0.0625 0.344 CD4_Naive L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 5.10e-01 -0.0382 0.058 0.344 CD4_Naive L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 5.16e-01 -0.0433 0.0666 0.344 CD4_Naive L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 1.87e-01 -0.125 0.0947 0.344 CD4_TCM L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 6.17e-01 -0.0384 0.0766 0.344 CD4_TCM L2
ENSG00000134644 PUM1 -210172 sc-eQTL 1.79e-01 -0.091 0.0676 0.344 CD4_TCM L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 4.98e-01 0.0382 0.0562 0.344 CD4_TCM L2
ENSG00000162517 PEF1 -789077 sc-eQTL 3.57e-01 0.0695 0.0753 0.344 CD4_TCM L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 6.37e-01 0.0337 0.0714 0.344 CD4_TCM L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 1.63e-01 -0.111 0.0792 0.344 CD4_TCM L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 6.41e-01 0.0448 0.0958 0.344 CD4_TEM L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 2.80e-01 0.0987 0.0911 0.344 CD4_TEM L2
ENSG00000134644 PUM1 -210172 sc-eQTL 6.23e-01 0.0374 0.0761 0.344 CD4_TEM L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 5.59e-01 -0.045 0.0769 0.344 CD4_TEM L2
ENSG00000162517 PEF1 -789077 sc-eQTL 7.65e-01 0.0258 0.0862 0.344 CD4_TEM L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 5.22e-01 0.0578 0.09 0.344 CD4_TEM L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 3.21e-01 -0.0881 0.0885 0.344 CD4_TEM L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 8.55e-01 0.019 0.104 0.344 CD8_CTL L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 1.68e-01 -0.11 0.0797 0.344 CD8_CTL L2
ENSG00000134644 PUM1 -210172 sc-eQTL 1.01e-01 0.127 0.0772 0.344 CD8_CTL L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 2.99e-01 -0.0894 0.0859 0.344 CD8_CTL L2
ENSG00000162517 PEF1 -789077 sc-eQTL 5.07e-01 0.0497 0.0749 0.344 CD8_CTL L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 3.24e-01 -0.0892 0.0903 0.344 CD8_CTL L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 6.69e-01 -0.0365 0.0851 0.344 CD8_CTL L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 5.08e-01 -0.0636 0.096 0.344 CD8_Naive L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 6.76e-01 -0.0347 0.0828 0.344 CD8_Naive L2
ENSG00000134644 PUM1 -210172 sc-eQTL 2.30e-02 0.151 0.0659 0.344 CD8_Naive L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 8.73e-01 -0.0102 0.0639 0.344 CD8_Naive L2
ENSG00000162517 PEF1 -789077 sc-eQTL 1.88e-01 -0.117 0.0884 0.344 CD8_Naive L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 6.98e-01 -0.031 0.0797 0.344 CD8_Naive L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 3.20e-01 -0.0863 0.0866 0.344 CD8_Naive L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 7.49e-01 0.0354 0.11 0.34 CD8_TCM L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 7.39e-01 -0.0338 0.101 0.34 CD8_TCM L2
ENSG00000134644 PUM1 -210172 sc-eQTL 1.24e-01 -0.146 0.0944 0.34 CD8_TCM L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 7.62e-02 -0.176 0.0986 0.34 CD8_TCM L2
ENSG00000162517 PEF1 -789077 sc-eQTL 3.55e-01 0.0941 0.101 0.34 CD8_TCM L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 4.10e-01 0.0758 0.0919 0.34 CD8_TCM L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 2.65e-01 -0.104 0.0927 0.34 CD8_TCM L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 2.30e-01 0.122 0.101 0.338 CD8_TEM L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 3.13e-01 0.0984 0.0972 0.338 CD8_TEM L2
ENSG00000134644 PUM1 -210172 sc-eQTL 9.31e-01 -0.00863 0.0997 0.338 CD8_TEM L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 8.21e-02 0.162 0.093 0.338 CD8_TEM L2
ENSG00000162517 PEF1 -789077 sc-eQTL 5.22e-01 0.0566 0.0881 0.338 CD8_TEM L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 6.39e-01 -0.0456 0.0972 0.338 CD8_TEM L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 1.78e-01 0.119 0.0876 0.338 CD8_TEM L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 1.46e-01 0.149 0.102 0.346 MAIT L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 6.35e-01 -0.0432 0.0908 0.346 MAIT L2
ENSG00000134644 PUM1 -210172 sc-eQTL 5.66e-01 0.0499 0.087 0.346 MAIT L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 5.87e-01 -0.0446 0.082 0.346 MAIT L2
ENSG00000162517 PEF1 -789077 sc-eQTL 8.38e-01 0.0184 0.0902 0.346 MAIT L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 2.02e-01 -0.117 0.0911 0.346 MAIT L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 8.44e-01 -0.0186 0.0942 0.346 MAIT L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 2.50e-01 -0.118 0.103 0.344 NK_CD56bright L2
ENSG00000121753 ADGRB2 -909074 sc-eQTL 2.92e-01 0.0848 0.0804 0.344 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 1.07e-01 0.14 0.0864 0.344 NK_CD56bright L2
ENSG00000134644 PUM1 -210172 sc-eQTL 6.16e-01 -0.0458 0.0913 0.344 NK_CD56bright L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 7.65e-01 0.027 0.0901 0.344 NK_CD56bright L2
ENSG00000162517 PEF1 -789077 sc-eQTL 1.74e-01 -0.119 0.0871 0.344 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 2.65e-02 0.2 0.0894 0.344 NK_CD56bright L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 1.79e-01 0.12 0.0888 0.344 NK_CD56bright L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 5.03e-01 0.0648 0.0967 0.343 NK_CD56dim L2
ENSG00000121753 ADGRB2 -909074 sc-eQTL 4.47e-01 0.0648 0.085 0.343 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 4.88e-01 0.0497 0.0715 0.343 NK_CD56dim L2
ENSG00000134644 PUM1 -210172 sc-eQTL 1.80e-01 0.0983 0.0731 0.343 NK_CD56dim L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 9.52e-01 0.00473 0.0783 0.343 NK_CD56dim L2
ENSG00000162517 PEF1 -789077 sc-eQTL 2.12e-01 -0.0869 0.0694 0.343 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 3.66e-01 -0.0887 0.0979 0.343 NK_CD56dim L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 8.09e-02 -0.141 0.0803 0.343 NK_CD56dim L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 7.61e-01 -0.031 0.102 0.354 NK_HLA L2
ENSG00000121753 ADGRB2 -909074 sc-eQTL 5.78e-01 -0.045 0.0808 0.354 NK_HLA L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 5.60e-01 0.053 0.0908 0.354 NK_HLA L2
ENSG00000134644 PUM1 -210172 sc-eQTL 1.95e-01 0.115 0.0882 0.354 NK_HLA L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 9.02e-01 0.0104 0.0845 0.354 NK_HLA L2
ENSG00000162517 PEF1 -789077 sc-eQTL 1.82e-01 0.127 0.0948 0.354 NK_HLA L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 5.36e-02 -0.173 0.0891 0.354 NK_HLA L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 4.30e-03 -0.246 0.0851 0.354 NK_HLA L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 8.37e-01 -0.0195 0.0947 0.343 NK_cytokine L2
ENSG00000121753 ADGRB2 -909074 sc-eQTL 6.06e-01 -0.0441 0.0855 0.343 NK_cytokine L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 6.23e-01 0.0364 0.0739 0.343 NK_cytokine L2
ENSG00000134644 PUM1 -210172 sc-eQTL 1.48e-02 0.194 0.0788 0.343 NK_cytokine L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 9.53e-01 0.0052 0.088 0.343 NK_cytokine L2
ENSG00000162517 PEF1 -789077 sc-eQTL 5.91e-01 0.0403 0.0749 0.343 NK_cytokine L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 7.89e-01 0.025 0.0933 0.343 NK_cytokine L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 4.74e-01 -0.0621 0.0867 0.343 NK_cytokine L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 2.88e-01 -0.121 0.113 0.33 PB L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 9.90e-01 0.00173 0.132 0.33 PB L2
ENSG00000134644 PUM1 -210172 sc-eQTL 1.64e-01 0.159 0.113 0.33 PB L2
ENSG00000162510 MATN1 132234 sc-eQTL 6.94e-01 -0.042 0.107 0.33 PB L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 3.41e-01 0.0726 0.0759 0.33 PB L2
ENSG00000162517 PEF1 -789077 sc-eQTL 5.94e-01 0.0626 0.117 0.33 PB L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 9.34e-01 -0.00868 0.104 0.33 PB L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 6.09e-01 -0.0569 0.111 0.33 PB L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 9.43e-01 0.00524 0.0738 0.343 Pro_T L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 1.33e-01 0.14 0.0932 0.343 Pro_T L2
ENSG00000134644 PUM1 -210172 sc-eQTL 6.08e-01 -0.0449 0.0873 0.343 Pro_T L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 2.16e-01 0.0775 0.0624 0.343 Pro_T L2
ENSG00000162517 PEF1 -789077 sc-eQTL 8.25e-01 0.0204 0.092 0.343 Pro_T L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 1.51e-01 0.126 0.0871 0.343 Pro_T L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 7.71e-01 0.0235 0.0805 0.343 Pro_T L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 5.39e-01 -0.0607 0.0987 0.344 Treg L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 3.62e-01 0.0872 0.0954 0.344 Treg L2
ENSG00000134644 PUM1 -210172 sc-eQTL 4.38e-01 0.0594 0.0764 0.344 Treg L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 5.68e-01 -0.0501 0.0875 0.344 Treg L2
ENSG00000162517 PEF1 -789077 sc-eQTL 1.02e-01 -0.155 0.094 0.344 Treg L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 1.21e-01 -0.138 0.0888 0.344 Treg L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 5.86e-01 0.0486 0.0891 0.344 Treg L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 3.76e-01 0.0897 0.101 0.346 cDC L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 7.25e-01 0.0386 0.11 0.346 cDC L2
ENSG00000134644 PUM1 -210172 sc-eQTL 8.87e-01 0.0134 0.0943 0.346 cDC L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 8.07e-01 -0.0162 0.0661 0.346 cDC L2
ENSG00000162517 PEF1 -789077 sc-eQTL 4.89e-01 0.0662 0.0956 0.346 cDC L2
ENSG00000168528 SERINC2 -553746 sc-eQTL 2.84e-01 0.0909 0.0846 0.346 cDC L2
ENSG00000284543 LINC01226 -650407 sc-eQTL 8.59e-01 -0.0148 0.0834 0.346 cDC L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 4.78e-01 -0.0636 0.0896 0.346 cDC L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 9.08e-01 0.00908 0.0783 0.344 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 7.93e-01 -0.0229 0.0873 0.344 cMono_IL1B L2
ENSG00000134644 PUM1 -210172 sc-eQTL 2.72e-01 -0.065 0.059 0.344 cMono_IL1B L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 9.20e-01 0.00519 0.0519 0.344 cMono_IL1B L2
ENSG00000162512 SDC3 -52939 sc-eQTL 9.10e-02 0.165 0.0971 0.344 cMono_IL1B L2
ENSG00000162517 PEF1 -789077 sc-eQTL 5.66e-01 0.0459 0.0798 0.344 cMono_IL1B L2
ENSG00000168528 SERINC2 -553746 sc-eQTL 4.06e-01 0.0822 0.0988 0.344 cMono_IL1B L2
ENSG00000284543 LINC01226 -650407 sc-eQTL 5.50e-01 0.0523 0.0874 0.344 cMono_IL1B L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 2.76e-01 -0.0889 0.0814 0.344 cMono_IL1B L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 7.00e-01 0.0317 0.0822 0.344 cMono_S100A L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 9.49e-03 -0.25 0.0956 0.344 cMono_S100A L2
ENSG00000134644 PUM1 -210172 sc-eQTL 2.74e-01 -0.0767 0.07 0.344 cMono_S100A L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 7.27e-01 0.0189 0.0539 0.344 cMono_S100A L2
ENSG00000162512 SDC3 -52939 sc-eQTL 8.23e-01 0.0209 0.0932 0.344 cMono_S100A L2
ENSG00000162517 PEF1 -789077 sc-eQTL 8.93e-02 0.143 0.0836 0.344 cMono_S100A L2
ENSG00000168528 SERINC2 -553746 sc-eQTL 5.27e-01 0.0624 0.0986 0.344 cMono_S100A L2
ENSG00000284543 LINC01226 -650407 sc-eQTL 7.84e-01 0.0219 0.0801 0.344 cMono_S100A L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 6.18e-01 0.0401 0.0804 0.344 cMono_S100A L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 3.78e-02 0.265 0.126 0.33 gdT L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 9.42e-01 0.00801 0.11 0.33 gdT L2
ENSG00000134644 PUM1 -210172 sc-eQTL 8.09e-01 -0.0275 0.113 0.33 gdT L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 4.20e-01 0.0996 0.123 0.33 gdT L2
ENSG00000162517 PEF1 -789077 sc-eQTL 7.13e-01 -0.0415 0.113 0.33 gdT L2
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 3.52e-01 0.106 0.114 0.33 gdT L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 4.17e-01 0.0896 0.11 0.33 gdT L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 5.88e-01 0.0499 0.0919 0.338 intMono L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 1.83e-02 -0.232 0.0975 0.338 intMono L2
ENSG00000134644 PUM1 -210172 sc-eQTL 9.56e-01 -0.00467 0.0838 0.338 intMono L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 2.13e-01 -0.0819 0.0655 0.338 intMono L2
ENSG00000162512 SDC3 -52939 sc-eQTL 9.30e-01 0.00792 0.0901 0.338 intMono L2
ENSG00000162517 PEF1 -789077 sc-eQTL 1.58e-01 -0.133 0.0942 0.338 intMono L2
ENSG00000168528 SERINC2 -553746 sc-eQTL 3.64e-01 0.0855 0.0941 0.338 intMono L2
ENSG00000284543 LINC01226 -650407 sc-eQTL 7.11e-01 0.0331 0.0893 0.338 intMono L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 5.08e-02 -0.174 0.0885 0.338 intMono L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 7.90e-01 0.0229 0.0858 0.342 ncMono L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 9.21e-02 -0.154 0.0908 0.342 ncMono L2
ENSG00000134644 PUM1 -210172 sc-eQTL 4.69e-01 -0.0541 0.0747 0.342 ncMono L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 3.76e-01 -0.0601 0.0678 0.342 ncMono L2
ENSG00000162512 SDC3 -52939 sc-eQTL 9.49e-01 0.00492 0.0761 0.342 ncMono L2
ENSG00000162517 PEF1 -789077 sc-eQTL 4.81e-01 -0.0615 0.0872 0.342 ncMono L2
ENSG00000168528 SERINC2 -553746 sc-eQTL 2.75e-01 0.0907 0.0828 0.342 ncMono L2
ENSG00000284543 LINC01226 -650407 sc-eQTL 4.71e-01 -0.0598 0.0829 0.342 ncMono L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 3.53e-01 0.0799 0.0859 0.342 ncMono L2
ENSG00000060688 SNRNP40 -440969 sc-eQTL 6.23e-01 -0.0499 0.101 0.35 pDC L2
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 2.34e-01 0.132 0.111 0.35 pDC L2
ENSG00000134644 PUM1 -210172 sc-eQTL 5.50e-01 0.0552 0.0921 0.35 pDC L2
ENSG00000162511 LAPTM5 98045 sc-eQTL 6.95e-01 0.0336 0.0857 0.35 pDC L2
ENSG00000162517 PEF1 -789077 sc-eQTL 9.75e-01 -0.00355 0.111 0.35 pDC L2
ENSG00000168528 SERINC2 -553746 sc-eQTL 7.48e-01 0.0335 0.104 0.35 pDC L2
ENSG00000284543 LINC01226 -650407 sc-eQTL 2.93e-01 -0.0848 0.0804 0.35 pDC L2
ENSG00000287510 AL137857.1 124126 sc-eQTL 2.48e-01 -0.109 0.0945 0.35 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -440969 sc-eQTL 5.65e-01 -0.0566 0.0983 0.344 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 5.91e-01 -0.044 0.0819 0.344 B_Memory LOneK1K
ENSG00000134644 PUM1 -210172 sc-eQTL 3.28e-01 0.0711 0.0724 0.344 B_Memory LOneK1K
ENSG00000162510 MATN1 132234 sc-eQTL 3.14e-01 0.0833 0.0826 0.344 B_Memory LOneK1K
ENSG00000162511 LAPTM5 98045 sc-eQTL 7.20e-01 0.0187 0.052 0.344 B_Memory LOneK1K
ENSG00000162517 PEF1 -789077 sc-eQTL 1.99e-01 0.111 0.0858 0.344 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 9.00e-01 0.00868 0.0688 0.344 B_Memory LOneK1K
ENSG00000287510 AL137857.1 124126 sc-eQTL 9.34e-01 0.00618 0.075 0.344 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -440969 sc-eQTL 2.93e-01 -0.0944 0.0895 0.344 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 4.55e-01 0.053 0.0709 0.344 B_Naive LOneK1K
ENSG00000134644 PUM1 -210172 sc-eQTL 8.64e-02 0.115 0.0667 0.344 B_Naive LOneK1K
ENSG00000162510 MATN1 132234 sc-eQTL 7.66e-01 0.0193 0.0646 0.344 B_Naive LOneK1K
ENSG00000162511 LAPTM5 98045 sc-eQTL 9.99e-01 -8.43e-05 0.0455 0.344 B_Naive LOneK1K
ENSG00000162517 PEF1 -789077 sc-eQTL 8.43e-01 -0.0165 0.0831 0.344 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 5.42e-01 -0.0358 0.0587 0.344 B_Naive LOneK1K
ENSG00000287510 AL137857.1 124126 sc-eQTL 3.01e-01 -0.0722 0.0697 0.344 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -440969 sc-eQTL 7.99e-01 0.0191 0.0747 0.344 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 6.79e-02 -0.154 0.0839 0.344 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -210172 sc-eQTL 2.01e-01 -0.069 0.0537 0.344 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 98045 sc-eQTL 8.27e-01 -0.0104 0.0474 0.344 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -52939 sc-eQTL 8.57e-02 0.166 0.0961 0.344 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -789077 sc-eQTL 5.88e-02 0.128 0.0674 0.344 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -553746 sc-eQTL 4.31e-01 0.0784 0.0994 0.344 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -650407 sc-eQTL 8.55e-01 0.0149 0.0816 0.344 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 124126 sc-eQTL 4.80e-01 -0.054 0.0763 0.344 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -440969 sc-eQTL 2.93e-01 0.0858 0.0814 0.343 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 4.07e-03 -0.254 0.0876 0.343 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -210172 sc-eQTL 6.82e-01 -0.0301 0.0732 0.343 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 98045 sc-eQTL 6.34e-01 -0.0279 0.0585 0.343 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -52939 sc-eQTL 4.84e-01 0.0599 0.0854 0.343 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -789077 sc-eQTL 3.03e-01 -0.08 0.0775 0.343 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -553746 sc-eQTL 1.87e-01 0.117 0.0883 0.343 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -650407 sc-eQTL 6.98e-01 -0.0327 0.0841 0.343 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 124126 sc-eQTL 8.94e-01 0.0113 0.0843 0.343 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -440969 sc-eQTL 9.93e-01 -0.000778 0.0918 0.343 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -909074 sc-eQTL 7.21e-01 0.0279 0.0781 0.343 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -441163 sc-eQTL 5.40e-01 0.0384 0.0626 0.343 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -210172 sc-eQTL 1.30e-02 0.17 0.0677 0.343 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 98045 sc-eQTL 8.95e-01 -0.0101 0.0768 0.343 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -789077 sc-eQTL 4.85e-01 -0.0407 0.0582 0.343 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 137315 sc-eQTL 2.04e-01 -0.112 0.0882 0.343 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 124126 sc-eQTL 9.63e-02 -0.127 0.0759 0.343 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000168528 SERINC2 -553746 eQTL 0.00364 0.115 0.0393 0.0 0.0 0.354

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000168528 SERINC2 -553746 4.21e-07 2.17e-07 7.92e-08 2.45e-07 1.02e-07 1.28e-07 3.25e-07 7.98e-08 2.12e-07 1.37e-07 2.18e-07 1.91e-07 3.4e-07 8.42e-08 8.45e-08 1.14e-07 8.74e-08 2.56e-07 9.19e-08 7.26e-08 1.39e-07 2.24e-07 2.04e-07 5.6e-08 2.99e-07 1.9e-07 1.48e-07 1.48e-07 1.54e-07 2.01e-07 1.39e-07 7.91e-08 4.87e-08 9.09e-08 8.75e-08 5.14e-08 6.48e-08 5.36e-08 4.9e-08 8.2e-08 4.84e-08 2.15e-07 2.28e-08 1.07e-08 5.84e-08 8.24e-09 9.19e-08 2.71e-09 4.68e-08