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Genes within 1Mb (chr1:30855094:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -441694 sc-eQTL 3.83e-01 0.0719 0.0822 0.549 B L1
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 5.02e-01 0.0443 0.0659 0.549 B L1
ENSG00000134644 PUM1 -210897 sc-eQTL 1.96e-01 -0.0715 0.0551 0.549 B L1
ENSG00000162510 MATN1 131509 sc-eQTL 7.53e-01 -0.0184 0.0582 0.549 B L1
ENSG00000162511 LAPTM5 97320 sc-eQTL 8.43e-01 0.00901 0.0456 0.549 B L1
ENSG00000162517 PEF1 -789802 sc-eQTL 2.22e-01 -0.084 0.0685 0.549 B L1
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 8.27e-01 -0.0117 0.0534 0.549 B L1
ENSG00000287510 AL137857.1 123401 sc-eQTL 8.66e-01 0.0107 0.0632 0.549 B L1
ENSG00000060688 SNRNP40 -441694 sc-eQTL 5.86e-01 0.0384 0.0703 0.549 CD4T L1
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 2.77e-01 0.0598 0.0548 0.549 CD4T L1
ENSG00000134644 PUM1 -210897 sc-eQTL 6.66e-01 -0.0212 0.0489 0.549 CD4T L1
ENSG00000162511 LAPTM5 97320 sc-eQTL 2.44e-01 0.0631 0.054 0.549 CD4T L1
ENSG00000162517 PEF1 -789802 sc-eQTL 7.92e-01 -0.015 0.0567 0.549 CD4T L1
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 3.52e-01 0.0452 0.0484 0.549 CD4T L1
ENSG00000287510 AL137857.1 123401 sc-eQTL 1.46e-01 0.0844 0.0578 0.549 CD4T L1
ENSG00000060688 SNRNP40 -441694 sc-eQTL 4.40e-01 -0.0719 0.093 0.549 CD8T L1
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 6.00e-01 0.0325 0.0619 0.549 CD8T L1
ENSG00000134644 PUM1 -210897 sc-eQTL 2.61e-01 -0.0613 0.0544 0.549 CD8T L1
ENSG00000162511 LAPTM5 97320 sc-eQTL 2.48e-01 0.0612 0.0528 0.549 CD8T L1
ENSG00000162517 PEF1 -789802 sc-eQTL 8.03e-01 -0.0163 0.0652 0.549 CD8T L1
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 6.82e-02 0.113 0.0616 0.549 CD8T L1
ENSG00000287510 AL137857.1 123401 sc-eQTL 6.26e-01 0.0381 0.078 0.549 CD8T L1
ENSG00000060688 SNRNP40 -441694 sc-eQTL 2.49e-01 -0.0967 0.0836 0.55 DC L1
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 4.28e-01 -0.0788 0.0992 0.55 DC L1
ENSG00000134644 PUM1 -210897 sc-eQTL 9.69e-01 0.00305 0.0778 0.55 DC L1
ENSG00000162511 LAPTM5 97320 sc-eQTL 2.65e-01 0.062 0.0554 0.55 DC L1
ENSG00000162517 PEF1 -789802 sc-eQTL 8.74e-02 0.154 0.0895 0.55 DC L1
ENSG00000168528 SERINC2 -554471 sc-eQTL 6.83e-01 -0.0375 0.0916 0.55 DC L1
ENSG00000284543 LINC01226 -651132 sc-eQTL 9.60e-01 0.00307 0.0607 0.55 DC L1
ENSG00000287510 AL137857.1 123401 sc-eQTL 2.88e-01 0.0933 0.0877 0.55 DC L1
ENSG00000060688 SNRNP40 -441694 sc-eQTL 3.85e-01 -0.0556 0.0639 0.549 Mono L1
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 4.58e-01 0.0589 0.0792 0.549 Mono L1
ENSG00000134644 PUM1 -210897 sc-eQTL 2.75e-01 0.0555 0.0507 0.549 Mono L1
ENSG00000162511 LAPTM5 97320 sc-eQTL 4.27e-01 -0.0372 0.0467 0.549 Mono L1
ENSG00000162512 SDC3 -53664 sc-eQTL 7.84e-03 -0.237 0.0884 0.549 Mono L1
ENSG00000162517 PEF1 -789802 sc-eQTL 4.45e-01 -0.0482 0.063 0.549 Mono L1
ENSG00000168528 SERINC2 -554471 sc-eQTL 5.61e-01 0.0561 0.0964 0.549 Mono L1
ENSG00000284543 LINC01226 -651132 sc-eQTL 3.87e-01 -0.0736 0.0848 0.549 Mono L1
ENSG00000287510 AL137857.1 123401 sc-eQTL 7.75e-01 -0.0212 0.0743 0.549 Mono L1
ENSG00000060688 SNRNP40 -441694 sc-eQTL 4.10e-01 0.0742 0.0899 0.549 NK L1
ENSG00000121753 ADGRB2 -909799 sc-eQTL 7.89e-01 0.0208 0.0775 0.549 NK L1
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 3.00e-01 -0.0639 0.0615 0.549 NK L1
ENSG00000134644 PUM1 -210897 sc-eQTL 1.08e-01 -0.104 0.0643 0.549 NK L1
ENSG00000162511 LAPTM5 97320 sc-eQTL 9.76e-02 0.123 0.074 0.549 NK L1
ENSG00000162517 PEF1 -789802 sc-eQTL 2.76e-02 0.119 0.0537 0.549 NK L1
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 3.80e-01 0.0735 0.0835 0.549 NK L1
ENSG00000287510 AL137857.1 123401 sc-eQTL 1.80e-01 0.103 0.0769 0.549 NK L1
ENSG00000060688 SNRNP40 -441694 sc-eQTL 9.63e-02 -0.113 0.0676 0.549 Other_T L1
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 7.07e-02 -0.131 0.0721 0.549 Other_T L1
ENSG00000134644 PUM1 -210897 sc-eQTL 3.03e-01 -0.0673 0.0652 0.549 Other_T L1
ENSG00000162511 LAPTM5 97320 sc-eQTL 7.29e-01 -0.0185 0.0535 0.549 Other_T L1
ENSG00000162517 PEF1 -789802 sc-eQTL 5.22e-01 -0.0458 0.0715 0.549 Other_T L1
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 8.48e-01 0.0169 0.0877 0.549 Other_T L1
ENSG00000287510 AL137857.1 123401 sc-eQTL 6.06e-01 -0.0472 0.0913 0.549 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -441694 sc-eQTL 7.47e-01 -0.0363 0.113 0.548 B_Activated L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 8.60e-02 0.194 0.113 0.548 B_Activated L2
ENSG00000134644 PUM1 -210897 sc-eQTL 3.12e-02 -0.226 0.104 0.548 B_Activated L2
ENSG00000162510 MATN1 131509 sc-eQTL 4.87e-01 0.0641 0.0921 0.548 B_Activated L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 9.68e-01 -0.00259 0.0643 0.548 B_Activated L2
ENSG00000162517 PEF1 -789802 sc-eQTL 6.24e-01 -0.0537 0.109 0.548 B_Activated L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 9.84e-01 -0.00209 0.104 0.548 B_Activated L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 6.07e-01 -0.0473 0.0918 0.548 B_Activated L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 8.57e-01 0.0181 0.1 0.549 B_Intermediate L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 9.72e-01 -0.00293 0.0836 0.549 B_Intermediate L2
ENSG00000134644 PUM1 -210897 sc-eQTL 8.32e-01 -0.0167 0.0788 0.549 B_Intermediate L2
ENSG00000162510 MATN1 131509 sc-eQTL 4.89e-01 -0.0568 0.082 0.549 B_Intermediate L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 6.37e-01 -0.0238 0.0503 0.549 B_Intermediate L2
ENSG00000162517 PEF1 -789802 sc-eQTL 1.63e-01 -0.13 0.0931 0.549 B_Intermediate L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 9.97e-01 0.000259 0.0707 0.549 B_Intermediate L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 5.49e-01 0.0474 0.079 0.549 B_Intermediate L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 8.31e-01 -0.0209 0.0981 0.547 B_Memory L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 8.91e-02 0.153 0.0897 0.547 B_Memory L2
ENSG00000134644 PUM1 -210897 sc-eQTL 5.93e-01 -0.0421 0.0786 0.547 B_Memory L2
ENSG00000162510 MATN1 131509 sc-eQTL 4.19e-01 -0.0608 0.0751 0.547 B_Memory L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 6.59e-01 0.0294 0.0667 0.547 B_Memory L2
ENSG00000162517 PEF1 -789802 sc-eQTL 7.87e-01 -0.0241 0.089 0.547 B_Memory L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 9.64e-01 -0.00349 0.0763 0.547 B_Memory L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 3.29e-01 -0.0872 0.0892 0.547 B_Memory L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 2.31e-01 0.107 0.0893 0.549 B_Naive1 L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 5.79e-01 0.043 0.0773 0.549 B_Naive1 L2
ENSG00000134644 PUM1 -210897 sc-eQTL 4.15e-01 -0.0556 0.0681 0.549 B_Naive1 L2
ENSG00000162510 MATN1 131509 sc-eQTL 8.24e-01 0.0154 0.0692 0.549 B_Naive1 L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 7.35e-01 0.0157 0.0462 0.549 B_Naive1 L2
ENSG00000162517 PEF1 -789802 sc-eQTL 2.57e-01 0.0924 0.0813 0.549 B_Naive1 L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 9.01e-01 -0.0076 0.0607 0.549 B_Naive1 L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 8.93e-01 0.0101 0.075 0.549 B_Naive1 L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 6.36e-01 -0.0458 0.0966 0.549 B_Naive2 L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 2.72e-01 -0.0876 0.0796 0.549 B_Naive2 L2
ENSG00000134644 PUM1 -210897 sc-eQTL 7.70e-01 -0.0228 0.0781 0.549 B_Naive2 L2
ENSG00000162510 MATN1 131509 sc-eQTL 7.74e-01 -0.0215 0.075 0.549 B_Naive2 L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 8.29e-01 0.011 0.0509 0.549 B_Naive2 L2
ENSG00000162517 PEF1 -789802 sc-eQTL 5.09e-01 -0.0612 0.0925 0.549 B_Naive2 L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 6.16e-01 -0.0372 0.0741 0.549 B_Naive2 L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 8.59e-01 0.0143 0.0801 0.549 B_Naive2 L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 9.20e-01 0.00957 0.0946 0.548 CD4_CTL L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 8.98e-01 -0.0119 0.0931 0.548 CD4_CTL L2
ENSG00000134644 PUM1 -210897 sc-eQTL 8.05e-02 0.159 0.0906 0.548 CD4_CTL L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 5.60e-01 0.0475 0.0813 0.548 CD4_CTL L2
ENSG00000162517 PEF1 -789802 sc-eQTL 6.95e-01 -0.0327 0.0834 0.548 CD4_CTL L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 6.98e-01 -0.0346 0.089 0.548 CD4_CTL L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 7.40e-01 0.0261 0.0785 0.548 CD4_CTL L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 6.12e-01 -0.0372 0.0732 0.549 CD4_Naive L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 2.77e-01 0.0706 0.0647 0.549 CD4_Naive L2
ENSG00000134644 PUM1 -210897 sc-eQTL 4.02e-01 -0.0435 0.0518 0.549 CD4_Naive L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 3.72e-01 0.0496 0.0554 0.549 CD4_Naive L2
ENSG00000162517 PEF1 -789802 sc-eQTL 9.49e-01 -0.00391 0.0609 0.549 CD4_Naive L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 4.47e-01 0.0429 0.0563 0.549 CD4_Naive L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 4.70e-01 0.0468 0.0647 0.549 CD4_Naive L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 3.10e-01 0.0939 0.0923 0.549 CD4_TCM L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 7.52e-01 0.0236 0.0746 0.549 CD4_TCM L2
ENSG00000134644 PUM1 -210897 sc-eQTL 4.57e-01 0.0491 0.0659 0.549 CD4_TCM L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 8.42e-01 0.0109 0.0548 0.549 CD4_TCM L2
ENSG00000162517 PEF1 -789802 sc-eQTL 7.95e-01 -0.0191 0.0734 0.549 CD4_TCM L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 8.96e-01 -0.00913 0.0695 0.549 CD4_TCM L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 3.07e-02 0.167 0.0766 0.549 CD4_TCM L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 9.78e-01 0.00261 0.0936 0.549 CD4_TEM L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 3.31e-01 -0.0868 0.089 0.549 CD4_TEM L2
ENSG00000134644 PUM1 -210897 sc-eQTL 8.41e-01 -0.0149 0.0743 0.549 CD4_TEM L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 2.44e-01 0.0875 0.0749 0.549 CD4_TEM L2
ENSG00000162517 PEF1 -789802 sc-eQTL 4.31e-01 0.0664 0.0841 0.549 CD4_TEM L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 9.02e-01 -0.0109 0.0879 0.549 CD4_TEM L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 9.66e-01 -0.0037 0.0866 0.549 CD4_TEM L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 8.58e-01 -0.0182 0.101 0.549 CD8_CTL L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 6.17e-01 0.0389 0.0776 0.549 CD8_CTL L2
ENSG00000134644 PUM1 -210897 sc-eQTL 4.52e-01 -0.0567 0.0753 0.549 CD8_CTL L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 2.38e-01 0.0984 0.0832 0.549 CD8_CTL L2
ENSG00000162517 PEF1 -789802 sc-eQTL 7.68e-01 -0.0214 0.0727 0.549 CD8_CTL L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 1.82e-01 0.117 0.0874 0.549 CD8_CTL L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 5.05e-01 0.0551 0.0825 0.549 CD8_CTL L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 4.52e-01 -0.0698 0.0927 0.549 CD8_Naive L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 8.23e-01 0.0179 0.08 0.549 CD8_Naive L2
ENSG00000134644 PUM1 -210897 sc-eQTL 3.74e-01 -0.0573 0.0643 0.549 CD8_Naive L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 9.79e-01 -0.00164 0.0617 0.549 CD8_Naive L2
ENSG00000162517 PEF1 -789802 sc-eQTL 4.41e-01 0.0662 0.0857 0.549 CD8_Naive L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 4.45e-01 0.0588 0.0769 0.549 CD8_Naive L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 8.64e-02 0.143 0.0833 0.549 CD8_Naive L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 8.85e-01 0.015 0.103 0.558 CD8_TCM L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 7.06e-01 -0.0358 0.0947 0.558 CD8_TCM L2
ENSG00000134644 PUM1 -210897 sc-eQTL 2.17e-01 0.11 0.0887 0.558 CD8_TCM L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 4.36e-01 0.0727 0.0931 0.558 CD8_TCM L2
ENSG00000162517 PEF1 -789802 sc-eQTL 2.83e-01 -0.102 0.095 0.558 CD8_TCM L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 3.01e-01 -0.0892 0.0861 0.558 CD8_TCM L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 6.56e-01 0.0389 0.0872 0.558 CD8_TCM L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 9.04e-01 0.0121 0.0999 0.553 CD8_TEM L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 3.00e-01 -0.0993 0.0955 0.553 CD8_TEM L2
ENSG00000134644 PUM1 -210897 sc-eQTL 9.67e-01 -0.00408 0.0979 0.553 CD8_TEM L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 8.27e-01 -0.0201 0.0921 0.553 CD8_TEM L2
ENSG00000162517 PEF1 -789802 sc-eQTL 4.05e-01 -0.0722 0.0865 0.553 CD8_TEM L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 8.72e-01 0.0154 0.0956 0.553 CD8_TEM L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 5.45e-01 -0.0524 0.0864 0.553 CD8_TEM L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 3.93e-02 -0.204 0.0981 0.548 MAIT L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 6.84e-01 -0.0358 0.0878 0.548 MAIT L2
ENSG00000134644 PUM1 -210897 sc-eQTL 1.47e-01 -0.122 0.0838 0.548 MAIT L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 7.70e-01 0.0232 0.0794 0.548 MAIT L2
ENSG00000162517 PEF1 -789802 sc-eQTL 4.56e-01 -0.0651 0.0872 0.548 MAIT L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 5.01e-02 0.173 0.0877 0.548 MAIT L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 8.23e-01 0.0204 0.0912 0.548 MAIT L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 2.47e-01 0.117 0.101 0.547 NK_CD56bright L2
ENSG00000121753 ADGRB2 -909799 sc-eQTL 9.20e-01 -0.00796 0.0791 0.547 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 5.25e-02 -0.165 0.0846 0.547 NK_CD56bright L2
ENSG00000134644 PUM1 -210897 sc-eQTL 7.98e-01 0.023 0.0896 0.547 NK_CD56bright L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 4.80e-01 0.0625 0.0883 0.547 NK_CD56bright L2
ENSG00000162517 PEF1 -789802 sc-eQTL 7.08e-02 0.155 0.0852 0.547 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 1.54e-02 -0.214 0.0876 0.547 NK_CD56bright L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 8.59e-01 -0.0155 0.0875 0.547 NK_CD56bright L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 5.79e-01 -0.053 0.0954 0.552 NK_CD56dim L2
ENSG00000121753 ADGRB2 -909799 sc-eQTL 5.37e-01 0.0519 0.0839 0.552 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 5.19e-01 -0.0456 0.0705 0.552 NK_CD56dim L2
ENSG00000134644 PUM1 -210897 sc-eQTL 4.18e-01 -0.0587 0.0723 0.552 NK_CD56dim L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 1.74e-01 0.105 0.0769 0.552 NK_CD56dim L2
ENSG00000162517 PEF1 -789802 sc-eQTL 9.66e-02 0.114 0.0683 0.552 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 4.10e-01 0.0798 0.0966 0.552 NK_CD56dim L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 3.31e-02 0.169 0.079 0.552 NK_CD56dim L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 9.82e-01 -0.00222 0.101 0.543 NK_HLA L2
ENSG00000121753 ADGRB2 -909799 sc-eQTL 4.58e-01 0.0594 0.0799 0.543 NK_HLA L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 4.77e-01 -0.064 0.0898 0.543 NK_HLA L2
ENSG00000134644 PUM1 -210897 sc-eQTL 1.60e-01 -0.123 0.0872 0.543 NK_HLA L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 1.65e-01 0.116 0.0832 0.543 NK_HLA L2
ENSG00000162517 PEF1 -789802 sc-eQTL 8.08e-02 -0.164 0.0935 0.543 NK_HLA L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 2.94e-02 0.193 0.0879 0.543 NK_HLA L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 2.50e-03 0.257 0.084 0.543 NK_HLA L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 5.96e-01 0.0501 0.0944 0.552 NK_cytokine L2
ENSG00000121753 ADGRB2 -909799 sc-eQTL 6.66e-01 0.0368 0.0853 0.552 NK_cytokine L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 9.41e-01 0.00545 0.0738 0.552 NK_cytokine L2
ENSG00000134644 PUM1 -210897 sc-eQTL 2.56e-02 -0.177 0.0788 0.552 NK_cytokine L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 3.10e-01 0.0892 0.0876 0.552 NK_cytokine L2
ENSG00000162517 PEF1 -789802 sc-eQTL 4.47e-01 -0.0569 0.0747 0.552 NK_cytokine L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 8.75e-01 0.0147 0.0931 0.552 NK_cytokine L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 2.16e-01 0.107 0.0863 0.552 NK_cytokine L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 1.15e-01 0.172 0.108 0.53 PB L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 2.13e-01 -0.158 0.126 0.53 PB L2
ENSG00000134644 PUM1 -210897 sc-eQTL 8.98e-01 -0.0142 0.11 0.53 PB L2
ENSG00000162510 MATN1 131509 sc-eQTL 5.30e-01 0.0647 0.103 0.53 PB L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 8.52e-01 -0.0138 0.0735 0.53 PB L2
ENSG00000162517 PEF1 -789802 sc-eQTL 3.26e-01 -0.111 0.113 0.53 PB L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 2.19e-01 0.124 0.1 0.53 PB L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 1.66e-01 -0.148 0.106 0.53 PB L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 2.06e-01 -0.0925 0.0729 0.548 Pro_T L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 2.08e-01 -0.117 0.0925 0.548 Pro_T L2
ENSG00000134644 PUM1 -210897 sc-eQTL 5.95e-01 0.046 0.0866 0.548 Pro_T L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 5.77e-01 -0.0347 0.0621 0.548 Pro_T L2
ENSG00000162517 PEF1 -789802 sc-eQTL 9.44e-01 0.00645 0.0912 0.548 Pro_T L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 2.09e-01 -0.109 0.0865 0.548 Pro_T L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 7.33e-01 -0.0272 0.0798 0.548 Pro_T L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 2.89e-01 0.102 0.0954 0.549 Treg L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 8.74e-01 0.0147 0.0926 0.549 Treg L2
ENSG00000134644 PUM1 -210897 sc-eQTL 7.11e-01 -0.0274 0.0741 0.549 Treg L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 1.20e-01 0.132 0.0843 0.549 Treg L2
ENSG00000162517 PEF1 -789802 sc-eQTL 1.25e-01 0.14 0.0911 0.549 Treg L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 8.23e-02 0.15 0.0858 0.549 Treg L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 8.43e-01 0.0172 0.0863 0.549 Treg L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 8.84e-01 -0.0142 0.0971 0.544 cDC L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 5.30e-01 -0.066 0.105 0.544 cDC L2
ENSG00000134644 PUM1 -210897 sc-eQTL 3.85e-01 0.0785 0.0901 0.544 cDC L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 9.62e-01 -0.00299 0.0633 0.544 cDC L2
ENSG00000162517 PEF1 -789802 sc-eQTL 3.71e-01 0.082 0.0915 0.544 cDC L2
ENSG00000168528 SERINC2 -554471 sc-eQTL 6.66e-01 -0.0351 0.0812 0.544 cDC L2
ENSG00000284543 LINC01226 -651132 sc-eQTL 2.87e-01 -0.0849 0.0796 0.544 cDC L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 1.35e-01 0.128 0.0854 0.544 cDC L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 7.02e-01 0.0293 0.0764 0.549 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 5.73e-01 0.0481 0.0852 0.549 cMono_IL1B L2
ENSG00000134644 PUM1 -210897 sc-eQTL 5.55e-01 0.0341 0.0577 0.549 cMono_IL1B L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 2.79e-01 -0.0548 0.0505 0.549 cMono_IL1B L2
ENSG00000162512 SDC3 -53664 sc-eQTL 7.64e-02 -0.169 0.0947 0.549 cMono_IL1B L2
ENSG00000162517 PEF1 -789802 sc-eQTL 6.92e-01 -0.0309 0.0779 0.549 cMono_IL1B L2
ENSG00000168528 SERINC2 -554471 sc-eQTL 4.29e-01 0.0764 0.0965 0.549 cMono_IL1B L2
ENSG00000284543 LINC01226 -651132 sc-eQTL 2.29e-01 -0.103 0.0851 0.549 cMono_IL1B L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 9.81e-01 0.00188 0.0797 0.549 cMono_IL1B L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 6.99e-01 -0.0312 0.0806 0.549 cMono_S100A L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 8.26e-01 0.0209 0.0953 0.549 cMono_S100A L2
ENSG00000134644 PUM1 -210897 sc-eQTL 1.58e-01 0.0971 0.0685 0.549 cMono_S100A L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 1.49e-01 -0.0763 0.0527 0.549 cMono_S100A L2
ENSG00000162512 SDC3 -53664 sc-eQTL 5.62e-01 -0.0531 0.0914 0.549 cMono_S100A L2
ENSG00000162517 PEF1 -789802 sc-eQTL 1.80e-01 -0.111 0.0822 0.549 cMono_S100A L2
ENSG00000168528 SERINC2 -554471 sc-eQTL 7.43e-01 0.0318 0.0968 0.549 cMono_S100A L2
ENSG00000284543 LINC01226 -651132 sc-eQTL 7.86e-01 0.0214 0.0786 0.549 cMono_S100A L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 1.36e-01 -0.117 0.0785 0.549 cMono_S100A L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 1.98e-01 -0.156 0.121 0.576 gdT L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 8.38e-01 -0.0214 0.104 0.576 gdT L2
ENSG00000134644 PUM1 -210897 sc-eQTL 7.73e-01 -0.0311 0.107 0.576 gdT L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 9.61e-01 -0.00569 0.117 0.576 gdT L2
ENSG00000162517 PEF1 -789802 sc-eQTL 6.56e-01 -0.0476 0.107 0.576 gdT L2
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 5.57e-01 -0.0635 0.108 0.576 gdT L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 8.99e-01 0.0133 0.104 0.576 gdT L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 7.25e-01 -0.0315 0.0895 0.553 intMono L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 8.38e-02 0.166 0.0955 0.553 intMono L2
ENSG00000134644 PUM1 -210897 sc-eQTL 8.68e-01 -0.0136 0.0816 0.553 intMono L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 7.08e-01 0.024 0.064 0.553 intMono L2
ENSG00000162512 SDC3 -53664 sc-eQTL 9.25e-02 -0.147 0.0871 0.553 intMono L2
ENSG00000162517 PEF1 -789802 sc-eQTL 7.18e-02 0.165 0.0914 0.553 intMono L2
ENSG00000168528 SERINC2 -554471 sc-eQTL 9.59e-01 0.00475 0.0918 0.553 intMono L2
ENSG00000284543 LINC01226 -651132 sc-eQTL 2.05e-01 -0.11 0.0866 0.553 intMono L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 6.64e-03 0.234 0.0854 0.553 intMono L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 3.70e-01 -0.0755 0.084 0.55 ncMono L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 6.53e-01 0.0404 0.0897 0.55 ncMono L2
ENSG00000134644 PUM1 -210897 sc-eQTL 6.84e-01 0.0299 0.0733 0.55 ncMono L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 8.48e-01 0.0128 0.0666 0.55 ncMono L2
ENSG00000162512 SDC3 -53664 sc-eQTL 5.13e-01 -0.049 0.0746 0.55 ncMono L2
ENSG00000162517 PEF1 -789802 sc-eQTL 2.76e-01 0.0933 0.0854 0.55 ncMono L2
ENSG00000168528 SERINC2 -554471 sc-eQTL 6.96e-01 0.0319 0.0815 0.55 ncMono L2
ENSG00000284543 LINC01226 -651132 sc-eQTL 7.70e-01 0.0238 0.0814 0.55 ncMono L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 7.55e-01 -0.0264 0.0844 0.55 ncMono L2
ENSG00000060688 SNRNP40 -441694 sc-eQTL 3.96e-01 -0.083 0.0975 0.554 pDC L2
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 5.97e-01 -0.0568 0.107 0.554 pDC L2
ENSG00000134644 PUM1 -210897 sc-eQTL 6.57e-01 -0.0396 0.0889 0.554 pDC L2
ENSG00000162511 LAPTM5 97320 sc-eQTL 6.48e-01 0.0378 0.0826 0.554 pDC L2
ENSG00000162517 PEF1 -789802 sc-eQTL 9.36e-01 0.00856 0.107 0.554 pDC L2
ENSG00000168528 SERINC2 -554471 sc-eQTL 5.25e-01 -0.0638 0.1 0.554 pDC L2
ENSG00000284543 LINC01226 -651132 sc-eQTL 5.39e-01 0.0478 0.0777 0.554 pDC L2
ENSG00000287510 AL137857.1 123401 sc-eQTL 3.92e-02 0.188 0.0903 0.554 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -441694 sc-eQTL 5.96e-01 -0.0508 0.0957 0.549 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 2.03e-01 0.101 0.0794 0.549 B_Memory LOneK1K
ENSG00000134644 PUM1 -210897 sc-eQTL 1.69e-01 -0.0971 0.0703 0.549 B_Memory LOneK1K
ENSG00000162510 MATN1 131509 sc-eQTL 3.16e-01 -0.0808 0.0803 0.549 B_Memory LOneK1K
ENSG00000162511 LAPTM5 97320 sc-eQTL 9.99e-01 6.44e-05 0.0506 0.549 B_Memory LOneK1K
ENSG00000162517 PEF1 -789802 sc-eQTL 1.47e-01 -0.121 0.0834 0.549 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 9.07e-01 0.00783 0.0669 0.549 B_Memory LOneK1K
ENSG00000287510 AL137857.1 123401 sc-eQTL 7.83e-01 0.0201 0.0729 0.549 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -441694 sc-eQTL 3.69e-01 0.0784 0.087 0.549 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 9.57e-01 -0.00369 0.0689 0.549 B_Naive LOneK1K
ENSG00000134644 PUM1 -210897 sc-eQTL 3.35e-01 -0.0629 0.065 0.549 B_Naive LOneK1K
ENSG00000162510 MATN1 131509 sc-eQTL 8.02e-01 0.0157 0.0628 0.549 B_Naive LOneK1K
ENSG00000162511 LAPTM5 97320 sc-eQTL 4.63e-01 0.0325 0.0441 0.549 B_Naive LOneK1K
ENSG00000162517 PEF1 -789802 sc-eQTL 7.74e-01 0.0232 0.0807 0.549 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 5.79e-01 -0.0316 0.057 0.549 B_Naive LOneK1K
ENSG00000287510 AL137857.1 123401 sc-eQTL 7.76e-01 0.0193 0.0678 0.549 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -441694 sc-eQTL 9.24e-01 0.00694 0.0731 0.549 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 6.26e-01 0.0404 0.0827 0.549 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -210897 sc-eQTL 3.02e-01 0.0545 0.0527 0.549 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 97320 sc-eQTL 3.35e-01 -0.0447 0.0463 0.549 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -53664 sc-eQTL 7.52e-02 -0.168 0.094 0.549 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -789802 sc-eQTL 1.01e-01 -0.109 0.0661 0.549 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -554471 sc-eQTL 5.16e-01 0.0633 0.0973 0.549 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -651132 sc-eQTL 4.79e-01 -0.0566 0.0797 0.549 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 123401 sc-eQTL 6.65e-01 -0.0324 0.0747 0.549 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -441694 sc-eQTL 1.72e-01 -0.109 0.0796 0.55 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 1.47e-01 0.127 0.087 0.55 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -210897 sc-eQTL 7.43e-01 0.0235 0.0716 0.55 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 97320 sc-eQTL 7.77e-01 -0.0163 0.0573 0.55 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -53664 sc-eQTL 8.00e-03 -0.22 0.0823 0.55 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -789802 sc-eQTL 1.13e-01 0.12 0.0756 0.55 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -554471 sc-eQTL 8.84e-01 -0.0127 0.0868 0.55 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -651132 sc-eQTL 6.08e-01 -0.0423 0.0824 0.55 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 123401 sc-eQTL 5.14e-01 0.0538 0.0824 0.55 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -441694 sc-eQTL 7.81e-01 0.0254 0.091 0.552 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -909799 sc-eQTL 7.16e-01 0.0282 0.0775 0.552 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -441888 sc-eQTL 5.70e-01 -0.0353 0.0621 0.552 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -210897 sc-eQTL 6.08e-02 -0.127 0.0675 0.552 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 97320 sc-eQTL 1.83e-01 0.101 0.0758 0.552 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -789802 sc-eQTL 3.11e-01 0.0585 0.0577 0.552 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 136590 sc-eQTL 1.25e-01 0.134 0.0873 0.552 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 123401 sc-eQTL 2.40e-02 0.17 0.0748 0.552 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -441888 eQTL 9.49e-03 0.0449 0.0173 0.0 0.0 0.483

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -441888 5.74e-07 3.77e-07 6.57e-08 3.48e-07 1.1e-07 1.32e-07 3.94e-07 7.56e-08 2.75e-07 1.39e-07 3.47e-07 2.11e-07 5.39e-07 1.07e-07 9.33e-08 1.26e-07 8.53e-08 2.66e-07 9.19e-08 1.31e-07 1.48e-07 2.15e-07 2.26e-07 5.6e-08 4.46e-07 1.82e-07 1.37e-07 2.13e-07 1.58e-07 1.46e-07 1.95e-07 5.22e-08 5.48e-08 9.09e-08 2.84e-07 4.95e-08 9.11e-08 6.32e-08 5.86e-08 7.67e-08 4.82e-08 3.73e-07 3.46e-08 1.55e-08 4.06e-08 9.65e-09 8.93e-08 2.2e-09 4.98e-08