logo

Genes within 1Mb (chr1:30853557:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -443231 sc-eQTL 3.83e-01 0.142 0.163 0.94 B L1
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 7.75e-01 -0.0374 0.131 0.94 B L1
ENSG00000134644 PUM1 -212434 sc-eQTL 2.77e-01 -0.119 0.109 0.94 B L1
ENSG00000162510 MATN1 129972 sc-eQTL 9.59e-01 -0.00597 0.115 0.94 B L1
ENSG00000162511 LAPTM5 95783 sc-eQTL 1.07e-01 0.145 0.0896 0.94 B L1
ENSG00000162517 PEF1 -791339 sc-eQTL 5.71e-01 0.0772 0.136 0.94 B L1
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 2.48e-01 0.122 0.105 0.94 B L1
ENSG00000287510 AL137857.1 121864 sc-eQTL 7.81e-01 0.0348 0.125 0.94 B L1
ENSG00000060688 SNRNP40 -443231 sc-eQTL 8.45e-01 -0.0274 0.14 0.94 CD4T L1
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 2.25e-01 -0.132 0.109 0.94 CD4T L1
ENSG00000134644 PUM1 -212434 sc-eQTL 9.67e-01 0.004 0.0972 0.94 CD4T L1
ENSG00000162511 LAPTM5 95783 sc-eQTL 2.19e-01 0.132 0.107 0.94 CD4T L1
ENSG00000162517 PEF1 -791339 sc-eQTL 9.91e-01 0.00121 0.113 0.94 CD4T L1
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 4.19e-01 0.078 0.0962 0.94 CD4T L1
ENSG00000287510 AL137857.1 121864 sc-eQTL 9.21e-01 -0.0114 0.115 0.94 CD4T L1
ENSG00000060688 SNRNP40 -443231 sc-eQTL 1.77e-01 0.248 0.183 0.94 CD8T L1
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 1.86e-01 0.162 0.122 0.94 CD8T L1
ENSG00000134644 PUM1 -212434 sc-eQTL 5.90e-01 0.058 0.108 0.94 CD8T L1
ENSG00000162511 LAPTM5 95783 sc-eQTL 2.86e-01 0.112 0.104 0.94 CD8T L1
ENSG00000162517 PEF1 -791339 sc-eQTL 7.38e-01 0.0431 0.129 0.94 CD8T L1
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 8.08e-01 0.0299 0.123 0.94 CD8T L1
ENSG00000287510 AL137857.1 121864 sc-eQTL 9.78e-01 -0.00423 0.154 0.94 CD8T L1
ENSG00000060688 SNRNP40 -443231 sc-eQTL 7.08e-01 0.0626 0.167 0.944 DC L1
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 1.41e-01 -0.29 0.196 0.944 DC L1
ENSG00000134644 PUM1 -212434 sc-eQTL 8.72e-01 -0.0249 0.155 0.944 DC L1
ENSG00000162511 LAPTM5 95783 sc-eQTL 4.01e-01 -0.0928 0.11 0.944 DC L1
ENSG00000162517 PEF1 -791339 sc-eQTL 7.54e-01 -0.0563 0.179 0.944 DC L1
ENSG00000168528 SERINC2 -556008 sc-eQTL 2.54e-01 0.208 0.182 0.944 DC L1
ENSG00000284543 LINC01226 -652669 sc-eQTL 4.94e-01 -0.0825 0.121 0.944 DC L1
ENSG00000287510 AL137857.1 121864 sc-eQTL 9.75e-01 0.00558 0.175 0.944 DC L1
ENSG00000060688 SNRNP40 -443231 sc-eQTL 6.27e-01 0.0622 0.128 0.94 Mono L1
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 2.75e-01 0.173 0.158 0.94 Mono L1
ENSG00000134644 PUM1 -212434 sc-eQTL 6.31e-01 -0.0488 0.101 0.94 Mono L1
ENSG00000162511 LAPTM5 95783 sc-eQTL 7.08e-01 0.035 0.0934 0.94 Mono L1
ENSG00000162512 SDC3 -55201 sc-eQTL 2.24e-01 0.218 0.179 0.94 Mono L1
ENSG00000162517 PEF1 -791339 sc-eQTL 9.63e-01 0.0059 0.126 0.94 Mono L1
ENSG00000168528 SERINC2 -556008 sc-eQTL 4.04e-01 0.161 0.192 0.94 Mono L1
ENSG00000284543 LINC01226 -652669 sc-eQTL 6.13e-01 -0.086 0.17 0.94 Mono L1
ENSG00000287510 AL137857.1 121864 sc-eQTL 5.57e-01 -0.0871 0.148 0.94 Mono L1
ENSG00000060688 SNRNP40 -443231 sc-eQTL 3.04e-01 -0.183 0.177 0.942 NK L1
ENSG00000121753 ADGRB2 -911336 sc-eQTL 3.91e-01 -0.131 0.153 0.942 NK L1
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 7.89e-01 0.0326 0.122 0.942 NK L1
ENSG00000134644 PUM1 -212434 sc-eQTL 8.74e-01 0.0203 0.127 0.942 NK L1
ENSG00000162511 LAPTM5 95783 sc-eQTL 4.42e-01 0.113 0.146 0.942 NK L1
ENSG00000162517 PEF1 -791339 sc-eQTL 7.67e-01 0.0318 0.107 0.942 NK L1
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 3.64e-01 0.15 0.165 0.942 NK L1
ENSG00000287510 AL137857.1 121864 sc-eQTL 9.85e-01 -0.00278 0.152 0.942 NK L1
ENSG00000060688 SNRNP40 -443231 sc-eQTL 8.82e-01 0.0198 0.133 0.94 Other_T L1
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 4.96e-01 -0.0968 0.142 0.94 Other_T L1
ENSG00000134644 PUM1 -212434 sc-eQTL 3.24e-01 -0.126 0.127 0.94 Other_T L1
ENSG00000162511 LAPTM5 95783 sc-eQTL 3.10e-01 0.106 0.104 0.94 Other_T L1
ENSG00000162517 PEF1 -791339 sc-eQTL 2.17e-02 0.319 0.138 0.94 Other_T L1
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 3.65e-01 0.155 0.171 0.94 Other_T L1
ENSG00000287510 AL137857.1 121864 sc-eQTL 6.59e-01 -0.0788 0.178 0.94 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -443231 sc-eQTL 5.20e-01 0.149 0.232 0.946 B_Activated L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 9.45e-01 0.0163 0.234 0.946 B_Activated L2
ENSG00000134644 PUM1 -212434 sc-eQTL 4.01e-01 0.183 0.217 0.946 B_Activated L2
ENSG00000162510 MATN1 129972 sc-eQTL 8.58e-01 0.034 0.19 0.946 B_Activated L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 3.15e-01 0.133 0.132 0.946 B_Activated L2
ENSG00000162517 PEF1 -791339 sc-eQTL 6.65e-01 -0.0977 0.225 0.946 B_Activated L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 6.65e-01 0.0927 0.214 0.946 B_Activated L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 2.48e-02 -0.422 0.187 0.946 B_Activated L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 3.97e-01 0.169 0.199 0.94 B_Intermediate L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 2.89e-01 -0.176 0.166 0.94 B_Intermediate L2
ENSG00000134644 PUM1 -212434 sc-eQTL 6.16e-01 -0.0785 0.156 0.94 B_Intermediate L2
ENSG00000162510 MATN1 129972 sc-eQTL 9.73e-01 0.00554 0.163 0.94 B_Intermediate L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 6.84e-02 0.182 0.0992 0.94 B_Intermediate L2
ENSG00000162517 PEF1 -791339 sc-eQTL 8.89e-01 0.0261 0.186 0.94 B_Intermediate L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 1.71e-01 0.192 0.14 0.94 B_Intermediate L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 6.26e-01 0.0766 0.157 0.94 B_Intermediate L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 7.81e-01 0.0544 0.196 0.94 B_Memory L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 8.36e-01 0.0374 0.18 0.94 B_Memory L2
ENSG00000134644 PUM1 -212434 sc-eQTL 7.29e-02 -0.281 0.156 0.94 B_Memory L2
ENSG00000162510 MATN1 129972 sc-eQTL 6.12e-02 0.28 0.149 0.94 B_Memory L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 4.39e-02 0.267 0.132 0.94 B_Memory L2
ENSG00000162517 PEF1 -791339 sc-eQTL 9.37e-01 -0.014 0.178 0.94 B_Memory L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 6.69e-01 0.0652 0.152 0.94 B_Memory L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 1.85e-01 -0.236 0.178 0.94 B_Memory L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 6.78e-01 0.0734 0.177 0.94 B_Naive1 L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 2.12e-01 -0.19 0.152 0.94 B_Naive1 L2
ENSG00000134644 PUM1 -212434 sc-eQTL 5.05e-02 -0.262 0.133 0.94 B_Naive1 L2
ENSG00000162510 MATN1 129972 sc-eQTL 7.76e-01 -0.0388 0.137 0.94 B_Naive1 L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 2.53e-01 0.104 0.0909 0.94 B_Naive1 L2
ENSG00000162517 PEF1 -791339 sc-eQTL 5.96e-01 0.0854 0.161 0.94 B_Naive1 L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 3.57e-01 0.11 0.12 0.94 B_Naive1 L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 8.81e-01 0.0222 0.148 0.94 B_Naive1 L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 5.65e-01 0.109 0.189 0.94 B_Naive2 L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 1.72e-01 0.213 0.155 0.94 B_Naive2 L2
ENSG00000134644 PUM1 -212434 sc-eQTL 6.45e-01 0.0704 0.153 0.94 B_Naive2 L2
ENSG00000162510 MATN1 129972 sc-eQTL 6.84e-01 0.0597 0.146 0.94 B_Naive2 L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 1.69e-01 0.137 0.099 0.94 B_Naive2 L2
ENSG00000162517 PEF1 -791339 sc-eQTL 7.51e-01 0.0576 0.181 0.94 B_Naive2 L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 4.73e-01 -0.104 0.145 0.94 B_Naive2 L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 4.66e-01 0.114 0.156 0.94 B_Naive2 L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 4.62e-01 0.136 0.185 0.936 CD4_CTL L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 5.14e-01 0.119 0.182 0.936 CD4_CTL L2
ENSG00000134644 PUM1 -212434 sc-eQTL 4.65e-02 0.353 0.176 0.936 CD4_CTL L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 8.54e-01 0.0294 0.159 0.936 CD4_CTL L2
ENSG00000162517 PEF1 -791339 sc-eQTL 7.66e-01 0.0485 0.163 0.936 CD4_CTL L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 2.06e-01 -0.22 0.173 0.936 CD4_CTL L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 1.76e-01 -0.208 0.153 0.936 CD4_CTL L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 8.92e-01 -0.0198 0.146 0.94 CD4_Naive L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 3.72e-01 -0.116 0.129 0.94 CD4_Naive L2
ENSG00000134644 PUM1 -212434 sc-eQTL 5.92e-01 -0.0555 0.103 0.94 CD4_Naive L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 1.92e-01 0.144 0.11 0.94 CD4_Naive L2
ENSG00000162517 PEF1 -791339 sc-eQTL 3.70e-01 -0.109 0.121 0.94 CD4_Naive L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 2.58e-01 0.127 0.112 0.94 CD4_Naive L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 4.33e-01 0.101 0.129 0.94 CD4_Naive L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 3.44e-01 -0.173 0.182 0.94 CD4_TCM L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 5.52e-01 -0.0878 0.147 0.94 CD4_TCM L2
ENSG00000134644 PUM1 -212434 sc-eQTL 8.36e-01 0.0271 0.13 0.94 CD4_TCM L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 6.88e-01 0.0436 0.108 0.94 CD4_TCM L2
ENSG00000162517 PEF1 -791339 sc-eQTL 5.11e-01 0.0955 0.145 0.94 CD4_TCM L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 2.23e-01 -0.167 0.137 0.94 CD4_TCM L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 9.47e-01 -0.0102 0.153 0.94 CD4_TCM L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 9.43e-01 -0.0131 0.181 0.94 CD4_TEM L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 9.92e-01 -0.00165 0.173 0.94 CD4_TEM L2
ENSG00000134644 PUM1 -212434 sc-eQTL 7.98e-01 0.0369 0.144 0.94 CD4_TEM L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 5.87e-01 0.0792 0.146 0.94 CD4_TEM L2
ENSG00000162517 PEF1 -791339 sc-eQTL 8.16e-01 0.0381 0.163 0.94 CD4_TEM L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 7.85e-01 0.0467 0.17 0.94 CD4_TEM L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 6.56e-01 0.0748 0.168 0.94 CD4_TEM L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 5.53e-01 0.118 0.199 0.94 CD8_CTL L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 1.40e-02 0.374 0.151 0.94 CD8_CTL L2
ENSG00000134644 PUM1 -212434 sc-eQTL 3.12e-01 -0.15 0.148 0.94 CD8_CTL L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 4.25e-01 0.131 0.164 0.94 CD8_CTL L2
ENSG00000162517 PEF1 -791339 sc-eQTL 8.01e-01 -0.0361 0.143 0.94 CD8_CTL L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 5.55e-01 -0.102 0.173 0.94 CD8_CTL L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 6.20e-01 -0.0807 0.163 0.94 CD8_CTL L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 3.54e-01 0.169 0.182 0.94 CD8_Naive L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 9.10e-01 -0.0177 0.157 0.94 CD8_Naive L2
ENSG00000134644 PUM1 -212434 sc-eQTL 9.84e-01 -0.00255 0.127 0.94 CD8_Naive L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 6.44e-02 0.224 0.12 0.94 CD8_Naive L2
ENSG00000162517 PEF1 -791339 sc-eQTL 7.44e-01 -0.0551 0.169 0.94 CD8_Naive L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 3.09e-01 0.154 0.151 0.94 CD8_Naive L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 5.83e-01 -0.0907 0.165 0.94 CD8_Naive L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 3.69e-01 -0.188 0.208 0.944 CD8_TCM L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 5.54e-01 0.113 0.191 0.944 CD8_TCM L2
ENSG00000134644 PUM1 -212434 sc-eQTL 5.23e-01 0.115 0.18 0.944 CD8_TCM L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 2.43e-02 0.422 0.186 0.944 CD8_TCM L2
ENSG00000162517 PEF1 -791339 sc-eQTL 6.41e-01 -0.0899 0.192 0.944 CD8_TCM L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 4.38e-01 -0.135 0.174 0.944 CD8_TCM L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 2.55e-01 0.2 0.176 0.944 CD8_TCM L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 7.94e-01 -0.0494 0.189 0.941 CD8_TEM L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 6.18e-01 0.0907 0.181 0.941 CD8_TEM L2
ENSG00000134644 PUM1 -212434 sc-eQTL 6.01e-01 -0.0971 0.185 0.941 CD8_TEM L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 2.54e-01 -0.199 0.174 0.941 CD8_TEM L2
ENSG00000162517 PEF1 -791339 sc-eQTL 8.06e-01 0.0404 0.164 0.941 CD8_TEM L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 8.46e-01 0.0353 0.181 0.941 CD8_TEM L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 5.14e-01 -0.107 0.164 0.941 CD8_TEM L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 4.42e-01 -0.151 0.195 0.939 MAIT L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 5.22e-01 -0.111 0.173 0.939 MAIT L2
ENSG00000134644 PUM1 -212434 sc-eQTL 4.40e-02 -0.334 0.165 0.939 MAIT L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 5.58e-01 0.092 0.157 0.939 MAIT L2
ENSG00000162517 PEF1 -791339 sc-eQTL 3.34e-02 0.365 0.17 0.939 MAIT L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 2.22e-01 0.213 0.174 0.939 MAIT L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 4.03e-01 -0.151 0.18 0.939 MAIT L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 2.48e-01 0.232 0.2 0.942 NK_CD56bright L2
ENSG00000121753 ADGRB2 -911336 sc-eQTL 7.44e-01 0.0513 0.157 0.942 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 8.07e-01 -0.0415 0.17 0.942 NK_CD56bright L2
ENSG00000134644 PUM1 -212434 sc-eQTL 2.06e-01 0.225 0.177 0.942 NK_CD56bright L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 3.26e-01 0.173 0.175 0.942 NK_CD56bright L2
ENSG00000162517 PEF1 -791339 sc-eQTL 5.90e-01 0.0921 0.171 0.942 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 4.46e-01 0.135 0.176 0.942 NK_CD56bright L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 4.61e-01 -0.128 0.174 0.942 NK_CD56bright L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 6.98e-02 -0.342 0.187 0.942 NK_CD56dim L2
ENSG00000121753 ADGRB2 -911336 sc-eQTL 5.00e-01 -0.112 0.166 0.942 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 9.84e-01 0.00287 0.14 0.942 NK_CD56dim L2
ENSG00000134644 PUM1 -212434 sc-eQTL 8.57e-01 -0.0258 0.143 0.942 NK_CD56dim L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 6.38e-01 0.072 0.153 0.942 NK_CD56dim L2
ENSG00000162517 PEF1 -791339 sc-eQTL 5.80e-01 0.0754 0.136 0.942 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 6.80e-01 0.0791 0.191 0.942 NK_CD56dim L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 5.00e-01 -0.107 0.158 0.942 NK_CD56dim L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 3.03e-01 -0.203 0.197 0.941 NK_HLA L2
ENSG00000121753 ADGRB2 -911336 sc-eQTL 2.83e-01 -0.168 0.156 0.941 NK_HLA L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 6.92e-01 -0.0698 0.176 0.941 NK_HLA L2
ENSG00000134644 PUM1 -212434 sc-eQTL 1.81e-01 0.229 0.171 0.941 NK_HLA L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 7.39e-01 -0.0547 0.164 0.941 NK_HLA L2
ENSG00000162517 PEF1 -791339 sc-eQTL 6.34e-01 -0.088 0.184 0.941 NK_HLA L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 6.61e-01 0.0765 0.174 0.941 NK_HLA L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 7.28e-01 -0.0587 0.168 0.941 NK_HLA L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 9.50e-01 -0.0115 0.183 0.942 NK_cytokine L2
ENSG00000121753 ADGRB2 -911336 sc-eQTL 3.88e-01 -0.143 0.165 0.942 NK_cytokine L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 9.52e-01 -0.00855 0.143 0.942 NK_cytokine L2
ENSG00000134644 PUM1 -212434 sc-eQTL 5.03e-01 -0.104 0.155 0.942 NK_cytokine L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 9.62e-01 -0.00821 0.17 0.942 NK_cytokine L2
ENSG00000162517 PEF1 -791339 sc-eQTL 9.43e-01 -0.0105 0.145 0.942 NK_cytokine L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 5.82e-01 0.0994 0.18 0.942 NK_cytokine L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 4.32e-01 0.132 0.168 0.942 NK_cytokine L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 1.78e-01 0.316 0.233 0.941 PB L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 4.05e-01 -0.227 0.271 0.941 PB L2
ENSG00000134644 PUM1 -212434 sc-eQTL 2.24e-01 0.287 0.235 0.941 PB L2
ENSG00000162510 MATN1 129972 sc-eQTL 5.49e-01 0.132 0.22 0.941 PB L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 5.79e-01 0.0875 0.157 0.941 PB L2
ENSG00000162517 PEF1 -791339 sc-eQTL 5.98e-01 -0.128 0.242 0.941 PB L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 4.13e-01 -0.177 0.215 0.941 PB L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 9.63e-01 -0.0108 0.23 0.941 PB L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 1.41e-01 0.211 0.143 0.941 Pro_T L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 5.34e-01 -0.113 0.182 0.941 Pro_T L2
ENSG00000134644 PUM1 -212434 sc-eQTL 3.63e-01 0.154 0.17 0.941 Pro_T L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 8.78e-01 0.0187 0.122 0.941 Pro_T L2
ENSG00000162517 PEF1 -791339 sc-eQTL 5.70e-01 -0.102 0.179 0.941 Pro_T L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 4.17e-01 -0.138 0.17 0.941 Pro_T L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 3.61e-02 -0.327 0.155 0.941 Pro_T L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 3.81e-02 0.394 0.189 0.94 Treg L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 3.57e-01 -0.17 0.184 0.94 Treg L2
ENSG00000134644 PUM1 -212434 sc-eQTL 3.22e-01 0.146 0.147 0.94 Treg L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 2.00e-01 0.217 0.168 0.94 Treg L2
ENSG00000162517 PEF1 -791339 sc-eQTL 6.23e-01 0.0898 0.183 0.94 Treg L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 6.49e-01 -0.0784 0.172 0.94 Treg L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 8.64e-01 -0.0296 0.172 0.94 Treg L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 2.75e-01 0.206 0.188 0.939 cDC L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 2.70e-01 -0.225 0.203 0.939 cDC L2
ENSG00000134644 PUM1 -212434 sc-eQTL 3.03e-01 0.181 0.175 0.939 cDC L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 7.09e-01 -0.0459 0.123 0.939 cDC L2
ENSG00000162517 PEF1 -791339 sc-eQTL 9.22e-01 -0.0174 0.178 0.939 cDC L2
ENSG00000168528 SERINC2 -556008 sc-eQTL 1.94e-01 0.205 0.157 0.939 cDC L2
ENSG00000284543 LINC01226 -652669 sc-eQTL 5.72e-01 -0.0878 0.155 0.939 cDC L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 7.47e-01 0.0539 0.167 0.939 cDC L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 9.38e-01 -0.012 0.154 0.94 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 4.10e-01 0.142 0.172 0.94 cMono_IL1B L2
ENSG00000134644 PUM1 -212434 sc-eQTL 4.98e-01 -0.0791 0.116 0.94 cMono_IL1B L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 7.58e-01 0.0316 0.102 0.94 cMono_IL1B L2
ENSG00000162512 SDC3 -55201 sc-eQTL 1.61e-01 0.27 0.192 0.94 cMono_IL1B L2
ENSG00000162517 PEF1 -791339 sc-eQTL 6.80e-01 0.065 0.157 0.94 cMono_IL1B L2
ENSG00000168528 SERINC2 -556008 sc-eQTL 2.46e-01 0.226 0.194 0.94 cMono_IL1B L2
ENSG00000284543 LINC01226 -652669 sc-eQTL 7.02e-01 -0.0661 0.172 0.94 cMono_IL1B L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 7.92e-01 0.0424 0.161 0.94 cMono_IL1B L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 3.73e-01 0.144 0.161 0.94 cMono_S100A L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 3.98e-01 0.161 0.191 0.94 cMono_S100A L2
ENSG00000134644 PUM1 -212434 sc-eQTL 4.99e-01 -0.0933 0.138 0.94 cMono_S100A L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 6.44e-01 0.0491 0.106 0.94 cMono_S100A L2
ENSG00000162512 SDC3 -55201 sc-eQTL 8.26e-02 0.317 0.182 0.94 cMono_S100A L2
ENSG00000162517 PEF1 -791339 sc-eQTL 3.43e-01 0.157 0.165 0.94 cMono_S100A L2
ENSG00000168528 SERINC2 -556008 sc-eQTL 4.34e-01 0.152 0.194 0.94 cMono_S100A L2
ENSG00000284543 LINC01226 -652669 sc-eQTL 3.58e-01 -0.145 0.157 0.94 cMono_S100A L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 8.61e-01 0.0277 0.158 0.94 cMono_S100A L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 5.89e-01 -0.133 0.245 0.948 gdT L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 9.55e-02 0.35 0.209 0.948 gdT L2
ENSG00000134644 PUM1 -212434 sc-eQTL 3.03e-01 0.224 0.216 0.948 gdT L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 7.93e-02 0.413 0.234 0.948 gdT L2
ENSG00000162517 PEF1 -791339 sc-eQTL 1.14e-01 0.341 0.214 0.948 gdT L2
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 2.75e-01 -0.238 0.217 0.948 gdT L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 2.31e-01 0.252 0.21 0.948 gdT L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 7.10e-01 -0.068 0.183 0.944 intMono L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 3.07e-01 0.201 0.196 0.944 intMono L2
ENSG00000134644 PUM1 -212434 sc-eQTL 5.31e-01 -0.104 0.166 0.944 intMono L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 7.50e-01 0.0417 0.131 0.944 intMono L2
ENSG00000162512 SDC3 -55201 sc-eQTL 6.30e-01 -0.0862 0.179 0.944 intMono L2
ENSG00000162517 PEF1 -791339 sc-eQTL 4.27e-01 -0.149 0.188 0.944 intMono L2
ENSG00000168528 SERINC2 -556008 sc-eQTL 1.26e-01 0.286 0.186 0.944 intMono L2
ENSG00000284543 LINC01226 -652669 sc-eQTL 9.83e-01 0.00384 0.177 0.944 intMono L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 5.66e-01 -0.102 0.177 0.944 intMono L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 7.42e-01 0.0552 0.167 0.941 ncMono L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 5.68e-01 0.102 0.178 0.941 ncMono L2
ENSG00000134644 PUM1 -212434 sc-eQTL 5.81e-02 0.276 0.145 0.941 ncMono L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 9.77e-01 0.00386 0.133 0.941 ncMono L2
ENSG00000162512 SDC3 -55201 sc-eQTL 6.00e-01 -0.0779 0.149 0.941 ncMono L2
ENSG00000162517 PEF1 -791339 sc-eQTL 9.39e-01 -0.013 0.17 0.941 ncMono L2
ENSG00000168528 SERINC2 -556008 sc-eQTL 4.43e-01 0.125 0.162 0.941 ncMono L2
ENSG00000284543 LINC01226 -652669 sc-eQTL 6.68e-01 0.0695 0.162 0.941 ncMono L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 3.38e-02 -0.355 0.166 0.941 ncMono L2
ENSG00000060688 SNRNP40 -443231 sc-eQTL 9.59e-01 0.00912 0.179 0.932 pDC L2
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 3.64e-01 -0.178 0.196 0.932 pDC L2
ENSG00000134644 PUM1 -212434 sc-eQTL 1.45e-01 -0.237 0.162 0.932 pDC L2
ENSG00000162511 LAPTM5 95783 sc-eQTL 8.32e-01 -0.0321 0.151 0.932 pDC L2
ENSG00000162517 PEF1 -791339 sc-eQTL 9.58e-01 0.0104 0.196 0.932 pDC L2
ENSG00000168528 SERINC2 -556008 sc-eQTL 6.02e-01 0.096 0.183 0.932 pDC L2
ENSG00000284543 LINC01226 -652669 sc-eQTL 7.40e-01 -0.0473 0.142 0.932 pDC L2
ENSG00000287510 AL137857.1 121864 sc-eQTL 7.44e-01 -0.0547 0.168 0.932 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -443231 sc-eQTL 2.19e-01 0.237 0.193 0.94 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 6.79e-01 -0.0668 0.161 0.94 B_Memory LOneK1K
ENSG00000134644 PUM1 -212434 sc-eQTL 2.11e-01 -0.178 0.142 0.94 B_Memory LOneK1K
ENSG00000162510 MATN1 129972 sc-eQTL 2.27e-01 0.197 0.162 0.94 B_Memory LOneK1K
ENSG00000162511 LAPTM5 95783 sc-eQTL 1.20e-01 0.158 0.102 0.94 B_Memory LOneK1K
ENSG00000162517 PEF1 -791339 sc-eQTL 8.76e-01 0.0265 0.169 0.94 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 6.13e-01 0.0684 0.135 0.94 B_Memory LOneK1K
ENSG00000287510 AL137857.1 121864 sc-eQTL 3.51e-01 -0.137 0.147 0.94 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -443231 sc-eQTL 3.99e-01 0.146 0.173 0.94 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 9.17e-01 -0.0142 0.137 0.94 B_Naive LOneK1K
ENSG00000134644 PUM1 -212434 sc-eQTL 1.35e-01 -0.193 0.129 0.94 B_Naive LOneK1K
ENSG00000162510 MATN1 129972 sc-eQTL 5.60e-01 -0.0728 0.125 0.94 B_Naive LOneK1K
ENSG00000162511 LAPTM5 95783 sc-eQTL 1.35e-01 0.131 0.0873 0.94 B_Naive LOneK1K
ENSG00000162517 PEF1 -791339 sc-eQTL 6.20e-01 0.0796 0.16 0.94 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 7.87e-01 0.0306 0.113 0.94 B_Naive LOneK1K
ENSG00000287510 AL137857.1 121864 sc-eQTL 5.10e-01 0.0889 0.135 0.94 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -443231 sc-eQTL 4.24e-01 0.116 0.145 0.94 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 1.66e-01 0.228 0.164 0.94 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -212434 sc-eQTL 5.53e-01 -0.0625 0.105 0.94 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 95783 sc-eQTL 4.24e-01 0.0739 0.0923 0.94 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -55201 sc-eQTL 4.25e-02 0.381 0.187 0.94 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -791339 sc-eQTL 6.59e-01 0.0586 0.133 0.94 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -556008 sc-eQTL 3.02e-01 0.2 0.194 0.94 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -652669 sc-eQTL 6.97e-01 -0.0621 0.159 0.94 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 121864 sc-eQTL 8.20e-01 0.0339 0.149 0.94 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -443231 sc-eQTL 9.14e-01 -0.0175 0.161 0.942 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 4.97e-01 0.12 0.176 0.942 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -212434 sc-eQTL 3.89e-01 0.125 0.144 0.942 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 95783 sc-eQTL 5.53e-01 -0.0687 0.116 0.942 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -55201 sc-eQTL 7.40e-01 -0.056 0.169 0.942 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -791339 sc-eQTL 4.49e-01 -0.116 0.153 0.942 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -556008 sc-eQTL 2.74e-01 0.191 0.175 0.942 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -652669 sc-eQTL 7.73e-01 0.0479 0.166 0.942 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 121864 sc-eQTL 1.18e-02 -0.417 0.164 0.942 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -443231 sc-eQTL 1.74e-01 -0.243 0.178 0.942 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -911336 sc-eQTL 4.02e-01 -0.128 0.152 0.942 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -443425 sc-eQTL 7.81e-01 0.0341 0.122 0.942 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -212434 sc-eQTL 7.88e-01 -0.036 0.134 0.942 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 95783 sc-eQTL 6.43e-01 0.0694 0.15 0.942 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -791339 sc-eQTL 9.13e-01 -0.0124 0.114 0.942 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 135053 sc-eQTL 4.33e-01 0.135 0.172 0.942 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 121864 sc-eQTL 9.31e-01 0.0128 0.149 0.942 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -443231 eQTL 0.0191 0.0654 0.0279 0.00128 0.0 0.1
ENSG00000134668 SPOCD1 -962494 eQTL 0.041 -0.0838 0.0409 0.0 0.0 0.1

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina