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Genes within 1Mb (chr1:30853354:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -443434 sc-eQTL 2.40e-01 -0.0994 0.0844 0.348 B L1
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 8.79e-01 0.0103 0.0678 0.348 B L1
ENSG00000134644 PUM1 -212637 sc-eQTL 5.14e-01 0.0371 0.0568 0.348 B L1
ENSG00000162510 MATN1 129769 sc-eQTL 2.83e-01 0.0642 0.0597 0.348 B L1
ENSG00000162511 LAPTM5 95580 sc-eQTL 4.11e-01 0.0385 0.0468 0.348 B L1
ENSG00000162517 PEF1 -791542 sc-eQTL 6.00e-02 0.133 0.0701 0.348 B L1
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 4.70e-01 0.0397 0.0548 0.348 B L1
ENSG00000287510 AL137857.1 121661 sc-eQTL 9.22e-01 -0.00638 0.065 0.348 B L1
ENSG00000060688 SNRNP40 -443434 sc-eQTL 7.63e-01 -0.0219 0.0727 0.348 CD4T L1
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 1.29e-01 -0.0862 0.0565 0.348 CD4T L1
ENSG00000134644 PUM1 -212637 sc-eQTL 6.07e-01 0.026 0.0505 0.348 CD4T L1
ENSG00000162511 LAPTM5 95580 sc-eQTL 4.65e-01 0.041 0.0559 0.348 CD4T L1
ENSG00000162517 PEF1 -791542 sc-eQTL 6.67e-01 0.0252 0.0586 0.348 CD4T L1
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 4.43e-01 0.0385 0.05 0.348 CD4T L1
ENSG00000287510 AL137857.1 121661 sc-eQTL 3.04e-01 -0.0617 0.0599 0.348 CD4T L1
ENSG00000060688 SNRNP40 -443434 sc-eQTL 1.52e-01 0.137 0.0951 0.348 CD8T L1
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 8.04e-01 0.0158 0.0636 0.348 CD8T L1
ENSG00000134644 PUM1 -212637 sc-eQTL 4.73e-02 0.111 0.0555 0.348 CD8T L1
ENSG00000162511 LAPTM5 95580 sc-eQTL 8.78e-01 0.00838 0.0544 0.348 CD8T L1
ENSG00000162517 PEF1 -791542 sc-eQTL 6.07e-01 -0.0345 0.0669 0.348 CD8T L1
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 3.03e-01 -0.0656 0.0636 0.348 CD8T L1
ENSG00000287510 AL137857.1 121661 sc-eQTL 3.48e-01 -0.0752 0.0799 0.348 CD8T L1
ENSG00000060688 SNRNP40 -443434 sc-eQTL 2.83e-01 0.0915 0.085 0.354 DC L1
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 5.07e-01 0.067 0.101 0.354 DC L1
ENSG00000134644 PUM1 -212637 sc-eQTL 1.54e-01 0.113 0.0786 0.354 DC L1
ENSG00000162511 LAPTM5 95580 sc-eQTL 3.71e-02 -0.117 0.0558 0.354 DC L1
ENSG00000162517 PEF1 -791542 sc-eQTL 7.62e-01 -0.0278 0.0915 0.354 DC L1
ENSG00000168528 SERINC2 -556211 sc-eQTL 6.88e-01 0.0374 0.093 0.354 DC L1
ENSG00000284543 LINC01226 -652872 sc-eQTL 2.03e-01 -0.0785 0.0614 0.354 DC L1
ENSG00000287510 AL137857.1 121661 sc-eQTL 7.73e-01 -0.0257 0.0893 0.354 DC L1
ENSG00000060688 SNRNP40 -443434 sc-eQTL 1.34e-01 0.0975 0.0648 0.348 Mono L1
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 1.58e-01 -0.114 0.0804 0.348 Mono L1
ENSG00000134644 PUM1 -212637 sc-eQTL 3.82e-02 -0.107 0.0512 0.348 Mono L1
ENSG00000162511 LAPTM5 95580 sc-eQTL 6.51e-01 -0.0216 0.0476 0.348 Mono L1
ENSG00000162512 SDC3 -55404 sc-eQTL 7.83e-02 0.161 0.0908 0.348 Mono L1
ENSG00000162517 PEF1 -791542 sc-eQTL 3.45e-01 0.0607 0.0641 0.348 Mono L1
ENSG00000168528 SERINC2 -556211 sc-eQTL 6.90e-01 0.0392 0.0982 0.348 Mono L1
ENSG00000284543 LINC01226 -652872 sc-eQTL 7.43e-01 0.0284 0.0865 0.348 Mono L1
ENSG00000287510 AL137857.1 121661 sc-eQTL 8.59e-01 -0.0135 0.0756 0.348 Mono L1
ENSG00000060688 SNRNP40 -443434 sc-eQTL 7.69e-01 -0.027 0.0918 0.35 NK L1
ENSG00000121753 ADGRB2 -911539 sc-eQTL 9.20e-01 -0.00794 0.0791 0.35 NK L1
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 1.25e-01 0.0963 0.0625 0.35 NK L1
ENSG00000134644 PUM1 -212637 sc-eQTL 1.46e-01 0.0958 0.0656 0.35 NK L1
ENSG00000162511 LAPTM5 95580 sc-eQTL 9.26e-01 -0.00703 0.0759 0.35 NK L1
ENSG00000162517 PEF1 -791542 sc-eQTL 5.50e-01 -0.0331 0.0554 0.35 NK L1
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 5.03e-01 0.0571 0.0852 0.35 NK L1
ENSG00000287510 AL137857.1 121661 sc-eQTL 3.92e-01 -0.0674 0.0786 0.35 NK L1
ENSG00000060688 SNRNP40 -443434 sc-eQTL 1.65e-01 0.0957 0.0687 0.348 Other_T L1
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 4.00e-01 0.0621 0.0736 0.348 Other_T L1
ENSG00000134644 PUM1 -212637 sc-eQTL 5.22e-01 -0.0425 0.0663 0.348 Other_T L1
ENSG00000162511 LAPTM5 95580 sc-eQTL 5.44e-01 0.033 0.0543 0.348 Other_T L1
ENSG00000162517 PEF1 -791542 sc-eQTL 3.57e-01 0.0669 0.0725 0.348 Other_T L1
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 1.41e-01 0.131 0.0886 0.348 Other_T L1
ENSG00000287510 AL137857.1 121661 sc-eQTL 8.80e-01 0.014 0.0927 0.348 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -443434 sc-eQTL 5.88e-01 0.0616 0.113 0.355 B_Activated L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 8.15e-02 -0.199 0.113 0.355 B_Activated L2
ENSG00000134644 PUM1 -212637 sc-eQTL 9.83e-02 0.175 0.105 0.355 B_Activated L2
ENSG00000162510 MATN1 129769 sc-eQTL 2.83e-01 -0.0997 0.0926 0.355 B_Activated L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 9.33e-01 -0.00543 0.0648 0.355 B_Activated L2
ENSG00000162517 PEF1 -791542 sc-eQTL 2.84e-01 0.118 0.11 0.355 B_Activated L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 9.33e-01 0.0088 0.105 0.355 B_Activated L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 4.71e-01 0.0667 0.0924 0.355 B_Activated L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 9.43e-01 0.00746 0.105 0.348 B_Intermediate L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 7.88e-01 -0.0235 0.0872 0.348 B_Intermediate L2
ENSG00000134644 PUM1 -212637 sc-eQTL 4.41e-01 0.0635 0.0822 0.348 B_Intermediate L2
ENSG00000162510 MATN1 129769 sc-eQTL 2.16e-01 0.106 0.0853 0.348 B_Intermediate L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 4.25e-01 0.0419 0.0525 0.348 B_Intermediate L2
ENSG00000162517 PEF1 -791542 sc-eQTL 1.19e-01 0.152 0.097 0.348 B_Intermediate L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 8.16e-01 0.0172 0.0738 0.348 B_Intermediate L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 7.42e-01 -0.0272 0.0825 0.348 B_Intermediate L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 8.76e-01 -0.0158 0.101 0.349 B_Memory L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 7.22e-01 -0.0331 0.0929 0.349 B_Memory L2
ENSG00000134644 PUM1 -212637 sc-eQTL 1.69e-01 -0.111 0.0805 0.349 B_Memory L2
ENSG00000162510 MATN1 129769 sc-eQTL 5.70e-01 0.044 0.0773 0.349 B_Memory L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 6.44e-01 -0.0317 0.0686 0.349 B_Memory L2
ENSG00000162517 PEF1 -791542 sc-eQTL 6.20e-01 -0.0454 0.0916 0.349 B_Memory L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 7.66e-01 0.0234 0.0785 0.349 B_Memory L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 5.98e-01 -0.0485 0.0919 0.349 B_Memory L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 7.66e-02 -0.163 0.0915 0.348 B_Naive1 L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 9.06e-01 -0.00939 0.0796 0.348 B_Naive1 L2
ENSG00000134644 PUM1 -212637 sc-eQTL 8.86e-01 0.0101 0.0702 0.348 B_Naive1 L2
ENSG00000162510 MATN1 129769 sc-eQTL 9.88e-01 -0.00109 0.0712 0.348 B_Naive1 L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 4.34e-01 0.0373 0.0475 0.348 B_Naive1 L2
ENSG00000162517 PEF1 -791542 sc-eQTL 8.46e-01 -0.0163 0.0839 0.348 B_Naive1 L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 6.36e-01 0.0296 0.0625 0.348 B_Naive1 L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 6.27e-01 -0.0376 0.0772 0.348 B_Naive1 L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 1.47e-01 0.142 0.0977 0.348 B_Naive2 L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 2.32e-02 0.183 0.0801 0.348 B_Naive2 L2
ENSG00000134644 PUM1 -212637 sc-eQTL 7.27e-01 0.0278 0.0793 0.348 B_Naive2 L2
ENSG00000162510 MATN1 129769 sc-eQTL 6.55e-01 0.0341 0.0761 0.348 B_Naive2 L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 4.46e-01 0.0395 0.0517 0.348 B_Naive2 L2
ENSG00000162517 PEF1 -791542 sc-eQTL 2.49e-01 0.109 0.0938 0.348 B_Naive2 L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 7.35e-01 0.0256 0.0753 0.348 B_Naive2 L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 7.96e-01 0.0211 0.0814 0.348 B_Naive2 L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 2.25e-01 0.118 0.0971 0.348 CD4_CTL L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 7.92e-01 0.0253 0.0958 0.348 CD4_CTL L2
ENSG00000134644 PUM1 -212637 sc-eQTL 7.46e-01 0.0305 0.094 0.348 CD4_CTL L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 6.38e-01 0.0395 0.0837 0.348 CD4_CTL L2
ENSG00000162517 PEF1 -791542 sc-eQTL 5.64e-01 0.0496 0.0858 0.348 CD4_CTL L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 9.87e-01 0.00146 0.0916 0.348 CD4_CTL L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 1.96e-01 -0.104 0.0805 0.348 CD4_CTL L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 6.49e-01 0.0345 0.0757 0.348 CD4_Naive L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 1.31e-01 -0.101 0.0668 0.348 CD4_Naive L2
ENSG00000134644 PUM1 -212637 sc-eQTL 5.07e-01 0.0356 0.0535 0.348 CD4_Naive L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 5.21e-01 0.0369 0.0574 0.348 CD4_Naive L2
ENSG00000162517 PEF1 -791542 sc-eQTL 8.65e-01 0.0107 0.063 0.348 CD4_Naive L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 5.66e-01 0.0335 0.0582 0.348 CD4_Naive L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 9.28e-01 -0.00609 0.0669 0.348 CD4_Naive L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 3.28e-01 -0.0934 0.0953 0.348 CD4_TCM L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 2.56e-01 -0.0873 0.0767 0.348 CD4_TCM L2
ENSG00000134644 PUM1 -212637 sc-eQTL 3.90e-01 -0.0586 0.068 0.348 CD4_TCM L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 2.54e-01 0.0644 0.0564 0.348 CD4_TCM L2
ENSG00000162517 PEF1 -791542 sc-eQTL 7.21e-01 0.0271 0.0757 0.348 CD4_TCM L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 3.89e-01 0.0617 0.0716 0.348 CD4_TCM L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 8.57e-02 -0.137 0.0793 0.348 CD4_TCM L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 5.43e-01 0.0585 0.096 0.348 CD4_TEM L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 2.84e-01 0.098 0.0913 0.348 CD4_TEM L2
ENSG00000134644 PUM1 -212637 sc-eQTL 3.30e-01 0.0743 0.0761 0.348 CD4_TEM L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 8.05e-01 0.019 0.0771 0.348 CD4_TEM L2
ENSG00000162517 PEF1 -791542 sc-eQTL 9.80e-01 -0.0022 0.0864 0.348 CD4_TEM L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 4.86e-01 0.0629 0.0901 0.348 CD4_TEM L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 3.79e-01 -0.0782 0.0888 0.348 CD4_TEM L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 8.59e-01 0.0185 0.104 0.348 CD8_CTL L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 3.22e-01 0.0792 0.0797 0.348 CD8_CTL L2
ENSG00000134644 PUM1 -212637 sc-eQTL 3.61e-01 0.0708 0.0774 0.348 CD8_CTL L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 9.76e-01 -0.00263 0.0859 0.348 CD8_CTL L2
ENSG00000162517 PEF1 -791542 sc-eQTL 8.40e-01 0.0151 0.0748 0.348 CD8_CTL L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 2.68e-01 -0.1 0.0901 0.348 CD8_CTL L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 3.84e-01 -0.074 0.0848 0.348 CD8_CTL L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 1.80e-01 0.128 0.0952 0.348 CD8_Naive L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 8.05e-01 0.0204 0.0824 0.348 CD8_Naive L2
ENSG00000134644 PUM1 -212637 sc-eQTL 1.41e-01 0.0975 0.066 0.348 CD8_Naive L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 3.14e-01 0.064 0.0634 0.348 CD8_Naive L2
ENSG00000162517 PEF1 -791542 sc-eQTL 1.95e-01 -0.114 0.088 0.348 CD8_Naive L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 9.41e-01 -0.00588 0.0794 0.348 CD8_Naive L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 5.74e-02 -0.164 0.0857 0.348 CD8_Naive L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 6.96e-01 0.0416 0.106 0.347 CD8_TCM L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 8.01e-01 0.0246 0.0974 0.347 CD8_TCM L2
ENSG00000134644 PUM1 -212637 sc-eQTL 8.05e-02 -0.16 0.0908 0.347 CD8_TCM L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 6.44e-01 -0.0443 0.0958 0.347 CD8_TCM L2
ENSG00000162517 PEF1 -791542 sc-eQTL 4.34e-01 0.0766 0.0978 0.347 CD8_TCM L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 8.82e-01 0.0131 0.0887 0.347 CD8_TCM L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 4.64e-01 -0.0656 0.0895 0.347 CD8_TCM L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 2.74e-02 0.221 0.0996 0.338 CD8_TEM L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 2.63e-01 0.108 0.0964 0.338 CD8_TEM L2
ENSG00000134644 PUM1 -212637 sc-eQTL 9.65e-02 -0.164 0.0981 0.338 CD8_TEM L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 1.71e-01 0.127 0.0925 0.338 CD8_TEM L2
ENSG00000162517 PEF1 -791542 sc-eQTL 8.62e-01 -0.0152 0.0875 0.338 CD8_TEM L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 8.07e-01 -0.0236 0.0964 0.338 CD8_TEM L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 4.10e-01 0.072 0.0871 0.338 CD8_TEM L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 1.74e-01 0.139 0.102 0.348 MAIT L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 8.93e-01 0.0122 0.0905 0.348 MAIT L2
ENSG00000134644 PUM1 -212637 sc-eQTL 6.95e-01 -0.034 0.0867 0.348 MAIT L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 9.07e-01 0.00954 0.0818 0.348 MAIT L2
ENSG00000162517 PEF1 -791542 sc-eQTL 7.11e-02 0.162 0.0892 0.348 MAIT L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 8.61e-01 -0.0159 0.0911 0.348 MAIT L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 4.07e-01 -0.0779 0.0937 0.348 MAIT L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 4.93e-01 -0.071 0.103 0.351 NK_CD56bright L2
ENSG00000121753 ADGRB2 -911539 sc-eQTL 5.81e-01 0.0448 0.081 0.351 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 7.67e-02 0.154 0.0868 0.351 NK_CD56bright L2
ENSG00000134644 PUM1 -212637 sc-eQTL 8.90e-01 -0.0127 0.0919 0.351 NK_CD56bright L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 9.93e-01 -0.000784 0.0906 0.351 NK_CD56bright L2
ENSG00000162517 PEF1 -791542 sc-eQTL 1.69e-01 -0.121 0.0876 0.351 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 1.40e-02 0.222 0.0897 0.351 NK_CD56bright L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 4.85e-01 0.0627 0.0896 0.351 NK_CD56bright L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 8.95e-01 -0.0129 0.0974 0.349 NK_CD56dim L2
ENSG00000121753 ADGRB2 -911539 sc-eQTL 6.62e-01 0.0375 0.0857 0.349 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 4.87e-01 0.0501 0.072 0.349 NK_CD56dim L2
ENSG00000134644 PUM1 -212637 sc-eQTL 7.11e-01 0.0275 0.0739 0.349 NK_CD56dim L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 8.45e-01 -0.0154 0.0788 0.349 NK_CD56dim L2
ENSG00000162517 PEF1 -791542 sc-eQTL 4.50e-01 -0.053 0.07 0.349 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 7.77e-01 0.0281 0.0987 0.349 NK_CD56dim L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 3.12e-02 -0.175 0.0806 0.349 NK_CD56dim L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 7.42e-01 -0.034 0.103 0.354 NK_HLA L2
ENSG00000121753 ADGRB2 -911539 sc-eQTL 8.10e-01 -0.0197 0.082 0.354 NK_HLA L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 4.92e-01 0.0635 0.0921 0.354 NK_HLA L2
ENSG00000134644 PUM1 -212637 sc-eQTL 1.88e-02 0.21 0.0886 0.354 NK_HLA L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 9.18e-01 0.00881 0.0857 0.354 NK_HLA L2
ENSG00000162517 PEF1 -791542 sc-eQTL 1.87e-01 0.127 0.0962 0.354 NK_HLA L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 2.93e-01 -0.0958 0.091 0.354 NK_HLA L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 1.03e-03 -0.286 0.0858 0.354 NK_HLA L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 6.82e-01 0.0391 0.0952 0.349 NK_cytokine L2
ENSG00000121753 ADGRB2 -911539 sc-eQTL 1.78e-01 -0.116 0.0857 0.349 NK_cytokine L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 4.40e-01 0.0575 0.0743 0.349 NK_cytokine L2
ENSG00000134644 PUM1 -212637 sc-eQTL 5.17e-02 0.156 0.0797 0.349 NK_cytokine L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 9.76e-01 0.00269 0.0885 0.349 NK_cytokine L2
ENSG00000162517 PEF1 -791542 sc-eQTL 9.67e-01 0.00316 0.0754 0.349 NK_cytokine L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 5.53e-01 0.0556 0.0937 0.349 NK_cytokine L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 9.27e-01 -0.008 0.0873 0.349 NK_cytokine L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 4.90e-01 -0.0775 0.112 0.348 PB L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 6.48e-01 -0.0596 0.13 0.348 PB L2
ENSG00000134644 PUM1 -212637 sc-eQTL 1.37e-01 0.167 0.112 0.348 PB L2
ENSG00000162510 MATN1 129769 sc-eQTL 4.23e-01 -0.0845 0.105 0.348 PB L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 3.92e-01 0.0645 0.0751 0.348 PB L2
ENSG00000162517 PEF1 -791542 sc-eQTL 9.25e-01 0.0109 0.116 0.348 PB L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 3.63e-01 -0.0938 0.103 0.348 PB L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 5.54e-01 -0.0651 0.11 0.348 PB L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 3.51e-01 0.0688 0.0736 0.35 Pro_T L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 6.10e-01 0.0478 0.0935 0.35 Pro_T L2
ENSG00000134644 PUM1 -212637 sc-eQTL 9.10e-01 0.00983 0.0873 0.35 Pro_T L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 3.16e-01 0.0627 0.0625 0.35 Pro_T L2
ENSG00000162517 PEF1 -791542 sc-eQTL 7.17e-01 0.0334 0.0919 0.35 Pro_T L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 1.29e-01 0.133 0.087 0.35 Pro_T L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 3.12e-01 -0.0815 0.0803 0.35 Pro_T L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 7.80e-01 0.0276 0.0989 0.348 Treg L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 8.40e-01 0.0193 0.0957 0.348 Treg L2
ENSG00000134644 PUM1 -212637 sc-eQTL 4.61e-01 0.0564 0.0765 0.348 Treg L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 8.76e-01 0.0137 0.0877 0.348 Treg L2
ENSG00000162517 PEF1 -791542 sc-eQTL 2.35e-02 -0.213 0.0936 0.348 Treg L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 4.52e-01 -0.0672 0.0892 0.348 Treg L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 5.07e-01 -0.0592 0.0891 0.348 Treg L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 2.21e-01 0.121 0.0984 0.349 cDC L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 5.99e-01 -0.0563 0.107 0.349 cDC L2
ENSG00000134644 PUM1 -212637 sc-eQTL 3.25e-01 0.0905 0.0917 0.349 cDC L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 1.69e-01 -0.0884 0.0641 0.349 cDC L2
ENSG00000162517 PEF1 -791542 sc-eQTL 7.24e-01 0.033 0.0932 0.349 cDC L2
ENSG00000168528 SERINC2 -556211 sc-eQTL 1.75e-01 0.112 0.0823 0.349 cDC L2
ENSG00000284543 LINC01226 -652872 sc-eQTL 6.73e-01 -0.0344 0.0812 0.349 cDC L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 2.86e-01 -0.0933 0.0872 0.349 cDC L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 9.94e-01 -0.000584 0.0785 0.348 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 8.61e-01 -0.0154 0.0875 0.348 cMono_IL1B L2
ENSG00000134644 PUM1 -212637 sc-eQTL 1.77e-01 -0.0799 0.059 0.348 cMono_IL1B L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 8.21e-01 -0.0118 0.052 0.348 cMono_IL1B L2
ENSG00000162512 SDC3 -55404 sc-eQTL 1.99e-02 0.227 0.0967 0.348 cMono_IL1B L2
ENSG00000162517 PEF1 -791542 sc-eQTL 6.99e-01 0.0309 0.08 0.348 cMono_IL1B L2
ENSG00000168528 SERINC2 -556211 sc-eQTL 7.27e-01 0.0346 0.0991 0.348 cMono_IL1B L2
ENSG00000284543 LINC01226 -652872 sc-eQTL 3.40e-01 0.0836 0.0875 0.348 cMono_IL1B L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 5.67e-01 -0.0469 0.0817 0.348 cMono_IL1B L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 5.06e-01 0.0552 0.0828 0.348 cMono_S100A L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 5.03e-02 -0.191 0.097 0.348 cMono_S100A L2
ENSG00000134644 PUM1 -212637 sc-eQTL 3.35e-02 -0.15 0.07 0.348 cMono_S100A L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 9.47e-01 0.00362 0.0544 0.348 cMono_S100A L2
ENSG00000162512 SDC3 -55404 sc-eQTL 1.45e-01 0.137 0.0935 0.348 cMono_S100A L2
ENSG00000162517 PEF1 -791542 sc-eQTL 3.15e-02 0.182 0.0839 0.348 cMono_S100A L2
ENSG00000168528 SERINC2 -556211 sc-eQTL 8.98e-01 -0.0128 0.0995 0.348 cMono_S100A L2
ENSG00000284543 LINC01226 -652872 sc-eQTL 6.74e-01 -0.0341 0.0808 0.348 cMono_S100A L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 1.79e-01 0.109 0.0808 0.348 cMono_S100A L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 1.47e-01 0.172 0.118 0.336 gdT L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 7.21e-01 0.0365 0.102 0.336 gdT L2
ENSG00000134644 PUM1 -212637 sc-eQTL 6.57e-01 0.0467 0.105 0.336 gdT L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 1.02e-01 0.187 0.113 0.336 gdT L2
ENSG00000162517 PEF1 -791542 sc-eQTL 8.57e-01 0.0189 0.105 0.336 gdT L2
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 8.75e-01 0.0166 0.105 0.336 gdT L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 1.16e-01 0.16 0.101 0.336 gdT L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 7.84e-01 0.0252 0.0921 0.349 intMono L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 3.51e-02 -0.208 0.098 0.349 intMono L2
ENSG00000134644 PUM1 -212637 sc-eQTL 2.57e-01 -0.0953 0.0838 0.349 intMono L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 4.13e-01 -0.054 0.0658 0.349 intMono L2
ENSG00000162512 SDC3 -55404 sc-eQTL 9.95e-01 -0.000556 0.0903 0.349 intMono L2
ENSG00000162517 PEF1 -791542 sc-eQTL 6.77e-02 -0.173 0.0941 0.349 intMono L2
ENSG00000168528 SERINC2 -556211 sc-eQTL 2.14e-01 0.117 0.0941 0.349 intMono L2
ENSG00000284543 LINC01226 -652872 sc-eQTL 5.10e-01 0.059 0.0894 0.349 intMono L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 6.91e-02 -0.162 0.0888 0.349 intMono L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 6.42e-01 0.0398 0.0856 0.344 ncMono L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 8.66e-01 -0.0154 0.0913 0.344 ncMono L2
ENSG00000134644 PUM1 -212637 sc-eQTL 8.52e-01 -0.014 0.0746 0.344 ncMono L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 3.20e-01 -0.0674 0.0676 0.344 ncMono L2
ENSG00000162512 SDC3 -55404 sc-eQTL 5.77e-01 -0.0424 0.0759 0.344 ncMono L2
ENSG00000162517 PEF1 -791542 sc-eQTL 4.47e-01 -0.0662 0.0869 0.344 ncMono L2
ENSG00000168528 SERINC2 -556211 sc-eQTL 3.48e-01 0.0778 0.0827 0.344 ncMono L2
ENSG00000284543 LINC01226 -652872 sc-eQTL 6.83e-01 -0.0338 0.0828 0.344 ncMono L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 7.04e-01 -0.0327 0.0858 0.344 ncMono L2
ENSG00000060688 SNRNP40 -443434 sc-eQTL 9.89e-01 -0.00139 0.0998 0.333 pDC L2
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 3.28e-01 0.107 0.109 0.333 pDC L2
ENSG00000134644 PUM1 -212637 sc-eQTL 8.32e-01 -0.0193 0.0908 0.333 pDC L2
ENSG00000162511 LAPTM5 95580 sc-eQTL 7.64e-01 0.0254 0.0844 0.333 pDC L2
ENSG00000162517 PEF1 -791542 sc-eQTL 6.29e-01 0.053 0.11 0.333 pDC L2
ENSG00000168528 SERINC2 -556211 sc-eQTL 9.79e-01 0.00267 0.102 0.333 pDC L2
ENSG00000284543 LINC01226 -652872 sc-eQTL 1.28e-01 -0.121 0.0789 0.333 pDC L2
ENSG00000287510 AL137857.1 121661 sc-eQTL 2.18e-01 -0.115 0.0931 0.333 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -443434 sc-eQTL 5.40e-01 0.0612 0.0998 0.348 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 2.86e-01 -0.0887 0.083 0.348 B_Memory LOneK1K
ENSG00000134644 PUM1 -212637 sc-eQTL 8.01e-01 0.0186 0.0737 0.348 B_Memory LOneK1K
ENSG00000162510 MATN1 129769 sc-eQTL 1.12e-01 0.133 0.0835 0.348 B_Memory LOneK1K
ENSG00000162511 LAPTM5 95580 sc-eQTL 8.79e-01 -0.00803 0.0528 0.348 B_Memory LOneK1K
ENSG00000162517 PEF1 -791542 sc-eQTL 1.94e-01 0.113 0.0871 0.348 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 8.28e-01 -0.0152 0.0698 0.348 B_Memory LOneK1K
ENSG00000287510 AL137857.1 121661 sc-eQTL 4.78e-01 -0.054 0.076 0.348 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -443434 sc-eQTL 3.30e-01 -0.0874 0.0894 0.348 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 2.32e-01 0.0847 0.0706 0.348 B_Naive LOneK1K
ENSG00000134644 PUM1 -212637 sc-eQTL 7.21e-01 0.0239 0.067 0.348 B_Naive LOneK1K
ENSG00000162510 MATN1 129769 sc-eQTL 7.73e-01 0.0186 0.0645 0.348 B_Naive LOneK1K
ENSG00000162511 LAPTM5 95580 sc-eQTL 5.94e-01 0.0242 0.0454 0.348 B_Naive LOneK1K
ENSG00000162517 PEF1 -791542 sc-eQTL 5.85e-01 0.0453 0.0829 0.348 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 6.97e-01 0.0229 0.0587 0.348 B_Naive LOneK1K
ENSG00000287510 AL137857.1 121661 sc-eQTL 9.16e-01 0.00735 0.0697 0.348 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -443434 sc-eQTL 5.51e-01 0.0444 0.0745 0.348 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 2.58e-01 -0.0954 0.0842 0.348 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -212637 sc-eQTL 6.10e-02 -0.101 0.0534 0.348 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 95580 sc-eQTL 8.29e-01 -0.0102 0.0473 0.348 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -55404 sc-eQTL 6.83e-03 0.259 0.0949 0.348 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -791542 sc-eQTL 7.11e-02 0.122 0.0674 0.348 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -556211 sc-eQTL 8.61e-01 0.0174 0.0993 0.348 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -652872 sc-eQTL 6.19e-01 0.0405 0.0814 0.348 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 121661 sc-eQTL 9.77e-01 -0.00215 0.0763 0.348 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -443434 sc-eQTL 3.18e-01 0.081 0.0809 0.349 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 9.48e-02 -0.148 0.0881 0.349 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -212637 sc-eQTL 4.57e-01 -0.0541 0.0726 0.349 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 95580 sc-eQTL 3.31e-01 -0.0565 0.058 0.349 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -55404 sc-eQTL 4.73e-01 0.0609 0.0848 0.349 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -791542 sc-eQTL 1.41e-01 -0.113 0.0768 0.349 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -556211 sc-eQTL 1.76e-01 0.119 0.0877 0.349 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -652872 sc-eQTL 5.85e-01 0.0456 0.0835 0.349 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 121661 sc-eQTL 2.18e-01 -0.103 0.0834 0.349 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -443434 sc-eQTL 8.93e-01 0.0124 0.0926 0.349 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -911539 sc-eQTL 9.29e-01 -0.00706 0.0789 0.349 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -443628 sc-eQTL 2.37e-01 0.0748 0.0631 0.349 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -212637 sc-eQTL 1.18e-01 0.108 0.0689 0.349 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 95580 sc-eQTL 8.33e-01 -0.0164 0.0775 0.349 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -791542 sc-eQTL 8.18e-01 -0.0136 0.0589 0.349 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 134850 sc-eQTL 8.13e-01 0.0212 0.0894 0.349 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 121661 sc-eQTL 1.16e-01 -0.121 0.0767 0.349 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 129769 eQTL 0.0135 -0.0523 0.0211 0.0 0.0 0.317

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina