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Genes within 1Mb (chr1:30851048:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -445740 sc-eQTL 2.48e-01 -0.0967 0.0835 0.325 B L1
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 8.45e-01 0.0131 0.0671 0.325 B L1
ENSG00000134644 PUM1 -214943 sc-eQTL 2.00e-01 0.0721 0.0561 0.325 B L1
ENSG00000162510 MATN1 127463 sc-eQTL 2.55e-01 0.0674 0.059 0.325 B L1
ENSG00000162511 LAPTM5 93274 sc-eQTL 1.60e-01 0.0651 0.0461 0.325 B L1
ENSG00000162517 PEF1 -793848 sc-eQTL 5.99e-02 0.131 0.0693 0.325 B L1
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 6.36e-01 0.0257 0.0543 0.325 B L1
ENSG00000287510 AL137857.1 119355 sc-eQTL 8.43e-01 -0.0127 0.0643 0.325 B L1
ENSG00000060688 SNRNP40 -445740 sc-eQTL 6.03e-01 -0.0375 0.072 0.325 CD4T L1
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 1.06e-01 -0.0907 0.0559 0.325 CD4T L1
ENSG00000134644 PUM1 -214943 sc-eQTL 4.74e-01 0.0359 0.0501 0.325 CD4T L1
ENSG00000162511 LAPTM5 93274 sc-eQTL 6.59e-01 0.0245 0.0555 0.325 CD4T L1
ENSG00000162517 PEF1 -793848 sc-eQTL 2.94e-01 0.061 0.0579 0.325 CD4T L1
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 7.09e-01 0.0186 0.0497 0.325 CD4T L1
ENSG00000287510 AL137857.1 119355 sc-eQTL 5.88e-01 -0.0323 0.0595 0.325 CD4T L1
ENSG00000060688 SNRNP40 -445740 sc-eQTL 1.98e-01 0.122 0.0947 0.325 CD8T L1
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 8.10e-01 -0.0153 0.0632 0.325 CD8T L1
ENSG00000134644 PUM1 -214943 sc-eQTL 1.36e-02 0.137 0.0549 0.325 CD8T L1
ENSG00000162511 LAPTM5 93274 sc-eQTL 9.88e-01 0.000818 0.0541 0.325 CD8T L1
ENSG00000162517 PEF1 -793848 sc-eQTL 9.98e-01 -0.000146 0.0666 0.325 CD8T L1
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 3.39e-01 -0.0607 0.0633 0.325 CD8T L1
ENSG00000287510 AL137857.1 119355 sc-eQTL 5.58e-01 -0.0467 0.0796 0.325 CD8T L1
ENSG00000060688 SNRNP40 -445740 sc-eQTL 2.87e-01 0.0904 0.0847 0.331 DC L1
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 6.37e-01 0.0475 0.101 0.331 DC L1
ENSG00000134644 PUM1 -214943 sc-eQTL 1.22e-01 0.122 0.0783 0.331 DC L1
ENSG00000162511 LAPTM5 93274 sc-eQTL 6.23e-02 -0.105 0.0558 0.331 DC L1
ENSG00000162517 PEF1 -793848 sc-eQTL 8.00e-01 0.0231 0.0912 0.331 DC L1
ENSG00000168528 SERINC2 -558517 sc-eQTL 5.47e-01 0.0559 0.0927 0.331 DC L1
ENSG00000284543 LINC01226 -655178 sc-eQTL 1.31e-01 -0.0926 0.0611 0.331 DC L1
ENSG00000287510 AL137857.1 119355 sc-eQTL 4.43e-01 0.0682 0.0888 0.331 DC L1
ENSG00000060688 SNRNP40 -445740 sc-eQTL 1.38e-01 0.0957 0.0642 0.325 Mono L1
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 3.68e-02 -0.167 0.0792 0.325 Mono L1
ENSG00000134644 PUM1 -214943 sc-eQTL 6.37e-02 -0.0949 0.0509 0.325 Mono L1
ENSG00000162511 LAPTM5 93274 sc-eQTL 7.08e-01 -0.0177 0.0472 0.325 Mono L1
ENSG00000162512 SDC3 -57710 sc-eQTL 2.16e-01 0.112 0.0904 0.325 Mono L1
ENSG00000162517 PEF1 -793848 sc-eQTL 2.32e-01 0.0761 0.0634 0.325 Mono L1
ENSG00000168528 SERINC2 -558517 sc-eQTL 4.16e-01 0.0792 0.0972 0.325 Mono L1
ENSG00000284543 LINC01226 -655178 sc-eQTL 8.58e-01 0.0153 0.0858 0.325 Mono L1
ENSG00000287510 AL137857.1 119355 sc-eQTL 6.71e-01 -0.0319 0.0749 0.325 Mono L1
ENSG00000060688 SNRNP40 -445740 sc-eQTL 7.02e-01 -0.0349 0.091 0.326 NK L1
ENSG00000121753 ADGRB2 -913845 sc-eQTL 8.85e-01 -0.0114 0.0784 0.326 NK L1
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 5.32e-02 0.12 0.0618 0.326 NK L1
ENSG00000134644 PUM1 -214943 sc-eQTL 1.73e-02 0.155 0.0645 0.326 NK L1
ENSG00000162511 LAPTM5 93274 sc-eQTL 7.09e-01 0.0281 0.0752 0.326 NK L1
ENSG00000162517 PEF1 -793848 sc-eQTL 6.07e-01 -0.0283 0.0549 0.326 NK L1
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 5.14e-01 0.0552 0.0844 0.326 NK L1
ENSG00000287510 AL137857.1 119355 sc-eQTL 5.62e-01 -0.0453 0.078 0.326 NK L1
ENSG00000060688 SNRNP40 -445740 sc-eQTL 2.15e-01 0.0852 0.0685 0.325 Other_T L1
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 5.92e-01 0.0395 0.0734 0.325 Other_T L1
ENSG00000134644 PUM1 -214943 sc-eQTL 5.97e-01 -0.035 0.066 0.325 Other_T L1
ENSG00000162511 LAPTM5 93274 sc-eQTL 6.76e-01 0.0227 0.0541 0.325 Other_T L1
ENSG00000162517 PEF1 -793848 sc-eQTL 6.69e-01 0.031 0.0723 0.325 Other_T L1
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 2.34e-01 0.105 0.0884 0.325 Other_T L1
ENSG00000287510 AL137857.1 119355 sc-eQTL 7.85e-01 0.0252 0.0923 0.325 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -445740 sc-eQTL 6.95e-01 0.0443 0.113 0.332 B_Activated L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 1.69e-01 -0.156 0.113 0.332 B_Activated L2
ENSG00000134644 PUM1 -214943 sc-eQTL 1.01e-01 0.173 0.105 0.332 B_Activated L2
ENSG00000162510 MATN1 127463 sc-eQTL 4.50e-01 -0.0698 0.0922 0.332 B_Activated L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 8.27e-01 0.0141 0.0644 0.332 B_Activated L2
ENSG00000162517 PEF1 -793848 sc-eQTL 1.79e-01 0.147 0.109 0.332 B_Activated L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 8.63e-01 -0.018 0.104 0.332 B_Activated L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 3.37e-01 0.0884 0.0918 0.332 B_Activated L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 9.71e-01 0.00377 0.104 0.324 B_Intermediate L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 9.74e-01 0.00281 0.0863 0.324 B_Intermediate L2
ENSG00000134644 PUM1 -214943 sc-eQTL 3.32e-01 0.079 0.0813 0.324 B_Intermediate L2
ENSG00000162510 MATN1 127463 sc-eQTL 5.41e-01 0.0518 0.0847 0.324 B_Intermediate L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 1.84e-01 0.0691 0.0518 0.324 B_Intermediate L2
ENSG00000162517 PEF1 -793848 sc-eQTL 1.99e-01 0.124 0.0962 0.324 B_Intermediate L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 6.11e-01 0.0371 0.073 0.324 B_Intermediate L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 8.83e-01 -0.0121 0.0817 0.324 B_Intermediate L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 8.17e-01 -0.0232 0.1 0.328 B_Memory L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 7.88e-01 -0.0248 0.0921 0.328 B_Memory L2
ENSG00000134644 PUM1 -214943 sc-eQTL 8.54e-02 -0.138 0.0796 0.328 B_Memory L2
ENSG00000162510 MATN1 127463 sc-eQTL 7.78e-01 0.0217 0.0767 0.328 B_Memory L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 9.78e-01 -0.00186 0.068 0.328 B_Memory L2
ENSG00000162517 PEF1 -793848 sc-eQTL 8.54e-01 -0.0168 0.0908 0.328 B_Memory L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 8.74e-01 0.0123 0.0778 0.328 B_Memory L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 2.39e-01 -0.107 0.0908 0.328 B_Memory L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 1.15e-01 -0.144 0.0909 0.325 B_Naive1 L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 9.52e-01 -0.00475 0.079 0.325 B_Naive1 L2
ENSG00000134644 PUM1 -214943 sc-eQTL 5.76e-01 0.039 0.0696 0.325 B_Naive1 L2
ENSG00000162510 MATN1 127463 sc-eQTL 8.53e-01 0.0132 0.0707 0.325 B_Naive1 L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 1.71e-01 0.0645 0.047 0.325 B_Naive1 L2
ENSG00000162517 PEF1 -793848 sc-eQTL 7.05e-01 -0.0315 0.0832 0.325 B_Naive1 L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 8.52e-01 0.0116 0.062 0.325 B_Naive1 L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 7.61e-01 -0.0233 0.0766 0.325 B_Naive1 L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 2.24e-01 0.119 0.0978 0.326 B_Naive2 L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 5.18e-02 0.157 0.0803 0.326 B_Naive2 L2
ENSG00000134644 PUM1 -214943 sc-eQTL 4.06e-01 0.0659 0.0791 0.326 B_Naive2 L2
ENSG00000162510 MATN1 127463 sc-eQTL 8.28e-01 0.0165 0.0761 0.326 B_Naive2 L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 4.24e-01 0.0414 0.0516 0.326 B_Naive2 L2
ENSG00000162517 PEF1 -793848 sc-eQTL 3.85e-01 0.0817 0.0938 0.326 B_Naive2 L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 7.60e-01 0.023 0.0752 0.326 B_Naive2 L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 9.72e-01 -0.0029 0.0813 0.326 B_Naive2 L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 2.75e-01 0.105 0.096 0.325 CD4_CTL L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 7.40e-01 0.0315 0.0947 0.325 CD4_CTL L2
ENSG00000134644 PUM1 -214943 sc-eQTL 7.34e-01 0.0316 0.0929 0.325 CD4_CTL L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 9.14e-01 0.00897 0.0828 0.325 CD4_CTL L2
ENSG00000162517 PEF1 -793848 sc-eQTL 4.92e-01 0.0584 0.0848 0.325 CD4_CTL L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 8.88e-01 -0.0128 0.0906 0.325 CD4_CTL L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 2.65e-01 -0.089 0.0797 0.325 CD4_CTL L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 6.21e-01 0.0372 0.0751 0.325 CD4_Naive L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 1.02e-01 -0.109 0.0662 0.325 CD4_Naive L2
ENSG00000134644 PUM1 -214943 sc-eQTL 3.66e-01 0.048 0.0531 0.325 CD4_Naive L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 8.00e-01 0.0144 0.057 0.325 CD4_Naive L2
ENSG00000162517 PEF1 -793848 sc-eQTL 6.38e-01 0.0294 0.0625 0.325 CD4_Naive L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 7.38e-01 0.0193 0.0578 0.325 CD4_Naive L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 9.87e-01 -0.00109 0.0664 0.325 CD4_Naive L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 1.16e-01 -0.149 0.094 0.325 CD4_TCM L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 1.44e-01 -0.111 0.0759 0.325 CD4_TCM L2
ENSG00000134644 PUM1 -214943 sc-eQTL 2.79e-01 -0.0731 0.0673 0.325 CD4_TCM L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 1.55e-01 0.0796 0.0557 0.325 CD4_TCM L2
ENSG00000162517 PEF1 -793848 sc-eQTL 5.32e-01 0.0469 0.075 0.325 CD4_TCM L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 5.61e-01 0.0414 0.071 0.325 CD4_TCM L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 1.92e-01 -0.103 0.0788 0.325 CD4_TCM L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 4.27e-01 0.0758 0.0953 0.325 CD4_TEM L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 3.84e-01 0.0791 0.0908 0.325 CD4_TEM L2
ENSG00000134644 PUM1 -214943 sc-eQTL 2.37e-01 0.0895 0.0755 0.325 CD4_TEM L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 7.93e-01 0.0201 0.0766 0.325 CD4_TEM L2
ENSG00000162517 PEF1 -793848 sc-eQTL 4.68e-01 0.0623 0.0857 0.325 CD4_TEM L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 4.19e-01 0.0724 0.0895 0.325 CD4_TEM L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 4.76e-01 -0.063 0.0882 0.325 CD4_TEM L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 5.06e-01 0.0693 0.104 0.325 CD8_CTL L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 4.67e-01 0.0581 0.0797 0.325 CD8_CTL L2
ENSG00000134644 PUM1 -214943 sc-eQTL 3.84e-01 0.0675 0.0773 0.325 CD8_CTL L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 8.42e-01 -0.0171 0.0858 0.325 CD8_CTL L2
ENSG00000162517 PEF1 -793848 sc-eQTL 6.07e-01 0.0384 0.0747 0.325 CD8_CTL L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 2.37e-01 -0.107 0.0899 0.325 CD8_CTL L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 4.47e-01 -0.0645 0.0847 0.325 CD8_CTL L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 5.33e-01 0.0593 0.095 0.325 CD8_Naive L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 8.57e-01 -0.0148 0.082 0.325 CD8_Naive L2
ENSG00000134644 PUM1 -214943 sc-eQTL 2.09e-02 0.152 0.0651 0.325 CD8_Naive L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 3.35e-01 0.0609 0.0631 0.325 CD8_Naive L2
ENSG00000162517 PEF1 -793848 sc-eQTL 1.36e-01 -0.131 0.0874 0.325 CD8_Naive L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 9.48e-01 -0.00513 0.0789 0.325 CD8_Naive L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 1.92e-01 -0.112 0.0856 0.325 CD8_Naive L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 8.21e-01 0.0242 0.107 0.329 CD8_TCM L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 8.44e-01 -0.0192 0.0976 0.329 CD8_TCM L2
ENSG00000134644 PUM1 -214943 sc-eQTL 9.74e-02 -0.152 0.0912 0.329 CD8_TCM L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 4.29e-01 -0.0761 0.0959 0.329 CD8_TCM L2
ENSG00000162517 PEF1 -793848 sc-eQTL 4.93e-01 0.0673 0.0981 0.329 CD8_TCM L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 7.70e-01 0.026 0.0889 0.329 CD8_TCM L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 5.16e-01 -0.0585 0.0898 0.329 CD8_TCM L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 4.23e-02 0.202 0.0987 0.315 CD8_TEM L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 1.17e-01 0.15 0.095 0.315 CD8_TEM L2
ENSG00000134644 PUM1 -214943 sc-eQTL 2.86e-01 -0.104 0.0974 0.315 CD8_TEM L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 1.26e-01 0.14 0.0913 0.315 CD8_TEM L2
ENSG00000162517 PEF1 -793848 sc-eQTL 5.66e-01 0.0497 0.0864 0.315 CD8_TEM L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 9.23e-01 -0.0092 0.0954 0.315 CD8_TEM L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 1.76e-01 0.117 0.0859 0.315 CD8_TEM L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 1.43e-01 0.149 0.102 0.325 MAIT L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 5.79e-01 -0.0504 0.0905 0.325 MAIT L2
ENSG00000134644 PUM1 -214943 sc-eQTL 8.73e-01 -0.0139 0.0869 0.325 MAIT L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 8.94e-01 -0.0109 0.0819 0.325 MAIT L2
ENSG00000162517 PEF1 -793848 sc-eQTL 1.28e-01 0.137 0.0895 0.325 MAIT L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 5.37e-01 -0.0564 0.0912 0.325 MAIT L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 5.31e-01 -0.059 0.094 0.325 MAIT L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 5.18e-01 -0.066 0.102 0.327 NK_CD56bright L2
ENSG00000121753 ADGRB2 -913845 sc-eQTL 4.11e-01 0.0658 0.0799 0.327 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 1.75e-01 0.117 0.0859 0.327 NK_CD56bright L2
ENSG00000134644 PUM1 -214943 sc-eQTL 8.64e-01 0.0156 0.0907 0.327 NK_CD56bright L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 7.79e-01 0.0251 0.0894 0.327 NK_CD56bright L2
ENSG00000162517 PEF1 -793848 sc-eQTL 1.55e-01 -0.123 0.0864 0.327 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 1.23e-02 0.223 0.0885 0.327 NK_CD56bright L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 2.43e-01 0.103 0.0882 0.327 NK_CD56bright L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 8.99e-01 -0.0123 0.0963 0.325 NK_CD56dim L2
ENSG00000121753 ADGRB2 -913845 sc-eQTL 3.18e-01 0.0846 0.0845 0.325 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 3.17e-01 0.0713 0.0711 0.325 NK_CD56dim L2
ENSG00000134644 PUM1 -214943 sc-eQTL 2.87e-01 0.0777 0.0729 0.325 NK_CD56dim L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 7.90e-01 0.0208 0.0779 0.325 NK_CD56dim L2
ENSG00000162517 PEF1 -793848 sc-eQTL 6.06e-01 -0.0358 0.0693 0.325 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 9.11e-01 -0.011 0.0976 0.325 NK_CD56dim L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 4.94e-02 -0.158 0.0798 0.325 NK_CD56dim L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 4.34e-01 -0.0795 0.101 0.331 NK_HLA L2
ENSG00000121753 ADGRB2 -913845 sc-eQTL 7.38e-01 -0.027 0.0806 0.331 NK_HLA L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 7.93e-01 0.0238 0.0906 0.331 NK_HLA L2
ENSG00000134644 PUM1 -214943 sc-eQTL 1.95e-02 0.205 0.0871 0.331 NK_HLA L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 7.55e-01 0.0263 0.0843 0.331 NK_HLA L2
ENSG00000162517 PEF1 -793848 sc-eQTL 4.81e-01 0.067 0.0949 0.331 NK_HLA L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 4.52e-01 -0.0674 0.0896 0.331 NK_HLA L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 3.73e-03 -0.249 0.0849 0.331 NK_HLA L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 4.01e-01 0.0792 0.0941 0.325 NK_cytokine L2
ENSG00000121753 ADGRB2 -913845 sc-eQTL 4.32e-02 -0.172 0.0843 0.325 NK_cytokine L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 1.66e-01 0.102 0.0732 0.325 NK_cytokine L2
ENSG00000134644 PUM1 -214943 sc-eQTL 3.86e-02 0.164 0.0787 0.325 NK_cytokine L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 8.65e-01 0.0149 0.0876 0.325 NK_cytokine L2
ENSG00000162517 PEF1 -793848 sc-eQTL 6.23e-01 0.0367 0.0746 0.325 NK_cytokine L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 3.92e-01 0.0795 0.0927 0.325 NK_cytokine L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 8.08e-01 0.0211 0.0864 0.325 NK_cytokine L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 4.64e-01 -0.0811 0.11 0.315 PB L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 4.60e-01 -0.095 0.128 0.315 PB L2
ENSG00000134644 PUM1 -214943 sc-eQTL 5.88e-02 0.209 0.11 0.315 PB L2
ENSG00000162510 MATN1 127463 sc-eQTL 8.71e-01 -0.0169 0.104 0.315 PB L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 2.58e-01 0.084 0.0738 0.315 PB L2
ENSG00000162517 PEF1 -793848 sc-eQTL 7.96e-01 -0.0296 0.114 0.315 PB L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 6.57e-01 -0.0452 0.102 0.315 PB L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 4.14e-01 -0.0885 0.108 0.315 PB L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 6.19e-01 0.0364 0.0732 0.326 Pro_T L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 7.67e-01 0.0276 0.0929 0.326 Pro_T L2
ENSG00000134644 PUM1 -214943 sc-eQTL 7.37e-01 0.0292 0.0867 0.326 Pro_T L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 2.21e-01 0.076 0.062 0.326 Pro_T L2
ENSG00000162517 PEF1 -793848 sc-eQTL 9.50e-01 0.00578 0.0913 0.326 Pro_T L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 8.30e-02 0.15 0.0863 0.326 Pro_T L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 4.62e-01 -0.0588 0.0798 0.326 Pro_T L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 5.73e-01 0.0554 0.0982 0.325 Treg L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 5.63e-01 0.0551 0.095 0.325 Treg L2
ENSG00000134644 PUM1 -214943 sc-eQTL 2.82e-01 0.0819 0.0758 0.325 Treg L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 8.09e-01 0.021 0.0871 0.325 Treg L2
ENSG00000162517 PEF1 -793848 sc-eQTL 6.50e-02 -0.173 0.0933 0.325 Treg L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 1.62e-01 -0.124 0.0883 0.325 Treg L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 9.24e-01 -0.00852 0.0886 0.325 Treg L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 1.38e-01 0.147 0.0984 0.324 cDC L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 3.51e-01 -0.1 0.107 0.324 cDC L2
ENSG00000134644 PUM1 -214943 sc-eQTL 2.13e-01 0.115 0.0916 0.324 cDC L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 2.63e-01 -0.0722 0.0643 0.324 cDC L2
ENSG00000162517 PEF1 -793848 sc-eQTL 3.14e-01 0.094 0.0932 0.324 cDC L2
ENSG00000168528 SERINC2 -558517 sc-eQTL 1.41e-01 0.122 0.0823 0.324 cDC L2
ENSG00000284543 LINC01226 -655178 sc-eQTL 5.76e-01 -0.0456 0.0813 0.324 cDC L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 7.81e-01 -0.0244 0.0876 0.324 cDC L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 9.58e-01 0.00414 0.078 0.325 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 7.39e-01 -0.029 0.087 0.325 cMono_IL1B L2
ENSG00000134644 PUM1 -214943 sc-eQTL 1.76e-01 -0.0796 0.0586 0.325 cMono_IL1B L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 8.51e-01 -0.00969 0.0517 0.325 cMono_IL1B L2
ENSG00000162512 SDC3 -57710 sc-eQTL 2.49e-02 0.217 0.0962 0.325 cMono_IL1B L2
ENSG00000162517 PEF1 -793848 sc-eQTL 3.29e-01 0.0777 0.0794 0.325 cMono_IL1B L2
ENSG00000168528 SERINC2 -558517 sc-eQTL 3.66e-01 0.0892 0.0983 0.325 cMono_IL1B L2
ENSG00000284543 LINC01226 -655178 sc-eQTL 3.59e-01 0.08 0.0869 0.325 cMono_IL1B L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 2.39e-01 -0.0955 0.081 0.325 cMono_IL1B L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 5.09e-01 0.0544 0.0822 0.325 cMono_S100A L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 1.01e-02 -0.248 0.0957 0.325 cMono_S100A L2
ENSG00000134644 PUM1 -214943 sc-eQTL 8.10e-02 -0.122 0.0698 0.325 cMono_S100A L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 9.14e-01 0.00582 0.054 0.325 cMono_S100A L2
ENSG00000162512 SDC3 -57710 sc-eQTL 1.94e-01 0.121 0.0929 0.325 cMono_S100A L2
ENSG00000162517 PEF1 -793848 sc-eQTL 3.92e-02 0.173 0.0834 0.325 cMono_S100A L2
ENSG00000168528 SERINC2 -558517 sc-eQTL 8.38e-01 0.0202 0.0988 0.325 cMono_S100A L2
ENSG00000284543 LINC01226 -655178 sc-eQTL 7.97e-01 -0.0207 0.0802 0.325 cMono_S100A L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 1.91e-01 0.105 0.0803 0.325 cMono_S100A L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 3.08e-01 0.122 0.12 0.318 gdT L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 7.30e-01 0.0356 0.103 0.318 gdT L2
ENSG00000134644 PUM1 -214943 sc-eQTL 8.12e-01 0.0254 0.106 0.318 gdT L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 4.48e-02 0.23 0.114 0.318 gdT L2
ENSG00000162517 PEF1 -793848 sc-eQTL 7.43e-01 -0.0347 0.106 0.318 gdT L2
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 7.98e-01 0.0273 0.107 0.318 gdT L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 7.43e-02 0.183 0.102 0.318 gdT L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 4.74e-01 0.0656 0.0914 0.324 intMono L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 6.13e-02 -0.184 0.0976 0.324 intMono L2
ENSG00000134644 PUM1 -214943 sc-eQTL 4.79e-01 -0.0591 0.0834 0.324 intMono L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 5.24e-01 -0.0418 0.0655 0.324 intMono L2
ENSG00000162512 SDC3 -57710 sc-eQTL 4.84e-01 -0.0629 0.0896 0.324 intMono L2
ENSG00000162517 PEF1 -793848 sc-eQTL 8.30e-02 -0.163 0.0936 0.324 intMono L2
ENSG00000168528 SERINC2 -558517 sc-eQTL 2.56e-01 0.107 0.0936 0.324 intMono L2
ENSG00000284543 LINC01226 -655178 sc-eQTL 7.27e-01 0.0311 0.089 0.324 intMono L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 1.19e-01 -0.138 0.0885 0.324 intMono L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 5.90e-01 0.046 0.0851 0.324 ncMono L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 5.15e-01 -0.0592 0.0907 0.324 ncMono L2
ENSG00000134644 PUM1 -214943 sc-eQTL 9.31e-01 -0.00641 0.0742 0.324 ncMono L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 4.54e-01 -0.0505 0.0673 0.324 ncMono L2
ENSG00000162512 SDC3 -57710 sc-eQTL 5.33e-01 -0.0471 0.0755 0.324 ncMono L2
ENSG00000162517 PEF1 -793848 sc-eQTL 7.65e-01 -0.0259 0.0866 0.324 ncMono L2
ENSG00000168528 SERINC2 -558517 sc-eQTL 1.70e-01 0.113 0.0821 0.324 ncMono L2
ENSG00000284543 LINC01226 -655178 sc-eQTL 6.88e-01 -0.0332 0.0824 0.324 ncMono L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 9.97e-01 -0.000332 0.0854 0.324 ncMono L2
ENSG00000060688 SNRNP40 -445740 sc-eQTL 5.36e-01 -0.0616 0.0995 0.322 pDC L2
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 3.47e-01 0.103 0.109 0.322 pDC L2
ENSG00000134644 PUM1 -214943 sc-eQTL 7.15e-01 -0.0332 0.0906 0.322 pDC L2
ENSG00000162511 LAPTM5 93274 sc-eQTL 8.81e-01 0.0126 0.0842 0.322 pDC L2
ENSG00000162517 PEF1 -793848 sc-eQTL 7.02e-01 0.0418 0.109 0.322 pDC L2
ENSG00000168528 SERINC2 -558517 sc-eQTL 9.83e-01 0.00215 0.102 0.322 pDC L2
ENSG00000284543 LINC01226 -655178 sc-eQTL 1.26e-01 -0.121 0.0787 0.322 pDC L2
ENSG00000287510 AL137857.1 119355 sc-eQTL 2.69e-01 -0.103 0.0929 0.322 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -445740 sc-eQTL 8.07e-01 0.024 0.0981 0.325 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 5.13e-01 -0.0534 0.0816 0.325 B_Memory LOneK1K
ENSG00000134644 PUM1 -214943 sc-eQTL 9.27e-01 0.00661 0.0724 0.325 B_Memory LOneK1K
ENSG00000162510 MATN1 127463 sc-eQTL 2.12e-01 0.103 0.0822 0.325 B_Memory LOneK1K
ENSG00000162511 LAPTM5 93274 sc-eQTL 6.88e-01 0.0208 0.0518 0.325 B_Memory LOneK1K
ENSG00000162517 PEF1 -793848 sc-eQTL 1.29e-01 0.13 0.0854 0.325 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 9.13e-01 -0.00749 0.0686 0.325 B_Memory LOneK1K
ENSG00000287510 AL137857.1 119355 sc-eQTL 3.55e-01 -0.0691 0.0746 0.325 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -445740 sc-eQTL 3.92e-01 -0.0761 0.0887 0.325 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 2.89e-01 0.0744 0.0701 0.325 B_Naive LOneK1K
ENSG00000134644 PUM1 -214943 sc-eQTL 2.56e-01 0.0754 0.0663 0.325 B_Naive LOneK1K
ENSG00000162510 MATN1 127463 sc-eQTL 5.60e-01 0.0373 0.064 0.325 B_Naive LOneK1K
ENSG00000162511 LAPTM5 93274 sc-eQTL 3.53e-01 0.0419 0.045 0.325 B_Naive LOneK1K
ENSG00000162517 PEF1 -793848 sc-eQTL 9.87e-01 0.00134 0.0823 0.325 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 9.81e-01 -0.00142 0.0582 0.325 B_Naive LOneK1K
ENSG00000287510 AL137857.1 119355 sc-eQTL 9.27e-01 -0.00634 0.0691 0.325 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -445740 sc-eQTL 5.88e-01 0.0401 0.074 0.325 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 7.98e-02 -0.147 0.0832 0.325 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -214943 sc-eQTL 8.01e-02 -0.0934 0.0531 0.325 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 93274 sc-eQTL 8.31e-01 -0.0101 0.047 0.325 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -57710 sc-eQTL 8.70e-03 0.25 0.0944 0.325 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -793848 sc-eQTL 4.31e-02 0.136 0.0668 0.325 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -558517 sc-eQTL 5.29e-01 0.0621 0.0986 0.325 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -655178 sc-eQTL 6.21e-01 0.0401 0.0809 0.325 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 119355 sc-eQTL 6.59e-01 -0.0335 0.0757 0.325 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -445740 sc-eQTL 1.95e-01 0.104 0.0802 0.325 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 4.74e-02 -0.174 0.0873 0.325 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -214943 sc-eQTL 7.47e-01 -0.0233 0.0722 0.325 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 93274 sc-eQTL 5.01e-01 -0.0389 0.0577 0.325 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -57710 sc-eQTL 9.89e-01 0.00117 0.0844 0.325 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -793848 sc-eQTL 2.72e-01 -0.0842 0.0764 0.325 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -558517 sc-eQTL 1.49e-01 0.126 0.0871 0.325 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -655178 sc-eQTL 8.67e-01 0.0139 0.083 0.325 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 119355 sc-eQTL 4.58e-01 -0.0617 0.083 0.325 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -445740 sc-eQTL 9.48e-01 0.00604 0.0916 0.325 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -913845 sc-eQTL 8.66e-01 -0.0132 0.078 0.325 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -445934 sc-eQTL 1.03e-01 0.102 0.0622 0.325 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -214943 sc-eQTL 2.50e-02 0.153 0.0677 0.325 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 93274 sc-eQTL 8.37e-01 0.0157 0.0766 0.325 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -793848 sc-eQTL 8.20e-01 -0.0132 0.0582 0.325 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 132544 sc-eQTL 8.50e-01 0.0167 0.0884 0.325 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 119355 sc-eQTL 2.32e-01 -0.0911 0.076 0.325 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 127463 eQTL 0.0221 -0.0487 0.0212 0.0 0.0 0.303
ENSG00000168528 SERINC2 -558517 eQTL 0.0151 0.102 0.0417 0.0 0.0 0.303

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina