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Genes within 1Mb (chr1:30851033:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -445755 sc-eQTL 2.65e-01 -0.0922 0.0825 0.327 B L1
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 8.02e-01 0.0167 0.0663 0.327 B L1
ENSG00000134644 PUM1 -214958 sc-eQTL 1.53e-01 0.0794 0.0554 0.327 B L1
ENSG00000162510 MATN1 127448 sc-eQTL 2.59e-01 0.066 0.0583 0.327 B L1
ENSG00000162511 LAPTM5 93259 sc-eQTL 1.48e-01 0.0662 0.0456 0.327 B L1
ENSG00000162517 PEF1 -793863 sc-eQTL 9.12e-02 0.117 0.0687 0.327 B L1
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 6.79e-01 0.0223 0.0536 0.327 B L1
ENSG00000287510 AL137857.1 119340 sc-eQTL 8.53e-01 -0.0118 0.0635 0.327 B L1
ENSG00000060688 SNRNP40 -445755 sc-eQTL 7.32e-01 -0.0244 0.0712 0.327 CD4T L1
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 1.99e-01 -0.0715 0.0554 0.327 CD4T L1
ENSG00000134644 PUM1 -214958 sc-eQTL 5.00e-01 0.0334 0.0495 0.327 CD4T L1
ENSG00000162511 LAPTM5 93259 sc-eQTL 6.52e-01 0.0248 0.0548 0.327 CD4T L1
ENSG00000162517 PEF1 -793863 sc-eQTL 2.65e-01 0.0639 0.0572 0.327 CD4T L1
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 8.67e-01 0.00823 0.0491 0.327 CD4T L1
ENSG00000287510 AL137857.1 119340 sc-eQTL 5.70e-01 -0.0334 0.0587 0.327 CD4T L1
ENSG00000060688 SNRNP40 -445755 sc-eQTL 1.87e-01 0.124 0.0937 0.327 CD8T L1
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 7.91e-01 -0.0166 0.0626 0.327 CD8T L1
ENSG00000134644 PUM1 -214958 sc-eQTL 9.29e-03 0.142 0.0542 0.327 CD8T L1
ENSG00000162511 LAPTM5 93259 sc-eQTL 8.97e-01 0.00694 0.0535 0.327 CD8T L1
ENSG00000162517 PEF1 -793863 sc-eQTL 8.07e-01 0.0161 0.0659 0.327 CD8T L1
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 2.63e-01 -0.0702 0.0625 0.327 CD8T L1
ENSG00000287510 AL137857.1 119340 sc-eQTL 3.46e-01 -0.0743 0.0786 0.327 CD8T L1
ENSG00000060688 SNRNP40 -445755 sc-eQTL 2.45e-01 0.0975 0.0837 0.333 DC L1
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 4.26e-01 0.0793 0.0993 0.333 DC L1
ENSG00000134644 PUM1 -214958 sc-eQTL 8.27e-02 0.135 0.0773 0.333 DC L1
ENSG00000162511 LAPTM5 93259 sc-eQTL 6.50e-02 -0.102 0.0551 0.333 DC L1
ENSG00000162517 PEF1 -793863 sc-eQTL 9.05e-01 0.0108 0.0902 0.333 DC L1
ENSG00000168528 SERINC2 -558532 sc-eQTL 5.70e-01 0.0521 0.0916 0.333 DC L1
ENSG00000284543 LINC01226 -655193 sc-eQTL 1.44e-01 -0.0886 0.0604 0.333 DC L1
ENSG00000287510 AL137857.1 119340 sc-eQTL 4.87e-01 0.0611 0.0878 0.333 DC L1
ENSG00000060688 SNRNP40 -445755 sc-eQTL 1.20e-01 0.0998 0.0639 0.327 Mono L1
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 3.97e-02 -0.163 0.0788 0.327 Mono L1
ENSG00000134644 PUM1 -214958 sc-eQTL 6.88e-02 -0.0926 0.0506 0.327 Mono L1
ENSG00000162511 LAPTM5 93259 sc-eQTL 8.32e-01 -0.00999 0.0469 0.327 Mono L1
ENSG00000162512 SDC3 -57725 sc-eQTL 2.71e-01 0.0993 0.09 0.327 Mono L1
ENSG00000162517 PEF1 -793863 sc-eQTL 2.19e-01 0.0778 0.0631 0.327 Mono L1
ENSG00000168528 SERINC2 -558532 sc-eQTL 3.65e-01 0.0878 0.0966 0.327 Mono L1
ENSG00000284543 LINC01226 -655193 sc-eQTL 8.75e-01 0.0134 0.0853 0.327 Mono L1
ENSG00000287510 AL137857.1 119340 sc-eQTL 7.08e-01 -0.028 0.0745 0.327 Mono L1
ENSG00000060688 SNRNP40 -445755 sc-eQTL 5.66e-01 -0.0517 0.0899 0.328 NK L1
ENSG00000121753 ADGRB2 -913860 sc-eQTL 8.42e-01 -0.0155 0.0774 0.328 NK L1
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 8.17e-02 0.107 0.0611 0.328 NK L1
ENSG00000134644 PUM1 -214958 sc-eQTL 1.55e-02 0.155 0.0637 0.328 NK L1
ENSG00000162511 LAPTM5 93259 sc-eQTL 8.10e-01 0.0179 0.0743 0.328 NK L1
ENSG00000162517 PEF1 -793863 sc-eQTL 4.64e-01 -0.0397 0.0542 0.328 NK L1
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 4.93e-01 0.0574 0.0834 0.328 NK L1
ENSG00000287510 AL137857.1 119340 sc-eQTL 5.13e-01 -0.0504 0.077 0.328 NK L1
ENSG00000060688 SNRNP40 -445755 sc-eQTL 4.07e-01 0.0565 0.0679 0.327 Other_T L1
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 4.55e-01 0.0543 0.0726 0.327 Other_T L1
ENSG00000134644 PUM1 -214958 sc-eQTL 4.93e-01 -0.0448 0.0653 0.327 Other_T L1
ENSG00000162511 LAPTM5 93259 sc-eQTL 6.57e-01 0.0238 0.0535 0.327 Other_T L1
ENSG00000162517 PEF1 -793863 sc-eQTL 8.08e-01 0.0174 0.0715 0.327 Other_T L1
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 3.25e-01 0.0863 0.0875 0.327 Other_T L1
ENSG00000287510 AL137857.1 119340 sc-eQTL 7.05e-01 0.0347 0.0913 0.327 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -445755 sc-eQTL 7.38e-01 0.0373 0.111 0.334 B_Activated L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 1.66e-01 -0.155 0.112 0.334 B_Activated L2
ENSG00000134644 PUM1 -214958 sc-eQTL 8.85e-02 0.177 0.103 0.334 B_Activated L2
ENSG00000162510 MATN1 127448 sc-eQTL 5.03e-01 -0.0611 0.091 0.334 B_Activated L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 8.58e-01 0.0114 0.0636 0.334 B_Activated L2
ENSG00000162517 PEF1 -793863 sc-eQTL 1.87e-01 0.142 0.108 0.334 B_Activated L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 8.62e-01 -0.0179 0.103 0.334 B_Activated L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 2.59e-01 0.103 0.0905 0.334 B_Activated L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 9.50e-01 0.00641 0.102 0.326 B_Intermediate L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 9.08e-01 -0.00993 0.0854 0.326 B_Intermediate L2
ENSG00000134644 PUM1 -214958 sc-eQTL 2.17e-01 0.0993 0.0803 0.326 B_Intermediate L2
ENSG00000162510 MATN1 127448 sc-eQTL 5.72e-01 0.0474 0.0838 0.326 B_Intermediate L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 1.98e-01 0.0661 0.0513 0.326 B_Intermediate L2
ENSG00000162517 PEF1 -793863 sc-eQTL 2.41e-01 0.112 0.0952 0.326 B_Intermediate L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 5.46e-01 0.0436 0.0722 0.326 B_Intermediate L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 7.25e-01 -0.0284 0.0808 0.326 B_Intermediate L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 8.25e-01 -0.0219 0.0989 0.33 B_Memory L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 7.11e-01 -0.0338 0.091 0.33 B_Memory L2
ENSG00000134644 PUM1 -214958 sc-eQTL 8.72e-02 -0.135 0.0787 0.33 B_Memory L2
ENSG00000162510 MATN1 127448 sc-eQTL 6.34e-01 0.0361 0.0758 0.33 B_Memory L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 9.80e-01 0.00168 0.0672 0.33 B_Memory L2
ENSG00000162517 PEF1 -793863 sc-eQTL 7.52e-01 -0.0284 0.0897 0.33 B_Memory L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 8.15e-01 0.018 0.0769 0.33 B_Memory L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 2.78e-01 -0.0977 0.0898 0.33 B_Memory L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 1.66e-01 -0.125 0.09 0.327 B_Naive1 L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 9.71e-01 -0.00288 0.0781 0.327 B_Naive1 L2
ENSG00000134644 PUM1 -214958 sc-eQTL 5.27e-01 0.0436 0.0688 0.327 B_Naive1 L2
ENSG00000162510 MATN1 127448 sc-eQTL 9.18e-01 0.00721 0.0699 0.327 B_Naive1 L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 1.62e-01 0.0652 0.0465 0.327 B_Naive1 L2
ENSG00000162517 PEF1 -793863 sc-eQTL 6.88e-01 -0.0331 0.0823 0.327 B_Naive1 L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 8.32e-01 0.0131 0.0613 0.327 B_Naive1 L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 7.10e-01 -0.0282 0.0757 0.327 B_Naive1 L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 2.65e-01 0.108 0.0968 0.328 B_Naive2 L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 3.35e-02 0.17 0.0793 0.328 B_Naive2 L2
ENSG00000134644 PUM1 -214958 sc-eQTL 3.74e-01 0.0697 0.0783 0.328 B_Naive2 L2
ENSG00000162510 MATN1 127448 sc-eQTL 7.71e-01 0.0219 0.0753 0.328 B_Naive2 L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 3.86e-01 0.0443 0.051 0.328 B_Naive2 L2
ENSG00000162517 PEF1 -793863 sc-eQTL 4.73e-01 0.0668 0.0929 0.328 B_Naive2 L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 9.79e-01 -0.00196 0.0745 0.328 B_Naive2 L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 9.86e-01 0.00137 0.0804 0.328 B_Naive2 L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 2.81e-01 0.103 0.095 0.327 CD4_CTL L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 6.27e-01 0.0455 0.0936 0.327 CD4_CTL L2
ENSG00000134644 PUM1 -214958 sc-eQTL 7.45e-01 0.0299 0.0918 0.327 CD4_CTL L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 9.63e-01 -0.00381 0.0819 0.327 CD4_CTL L2
ENSG00000162517 PEF1 -793863 sc-eQTL 5.56e-01 0.0494 0.0839 0.327 CD4_CTL L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 8.09e-01 -0.0217 0.0896 0.327 CD4_CTL L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 2.43e-01 -0.0923 0.0788 0.327 CD4_CTL L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 5.56e-01 0.0438 0.0742 0.327 CD4_Naive L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 1.49e-01 -0.0949 0.0655 0.327 CD4_Naive L2
ENSG00000134644 PUM1 -214958 sc-eQTL 3.49e-01 0.0492 0.0525 0.327 CD4_Naive L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 8.41e-01 0.0113 0.0563 0.327 CD4_Naive L2
ENSG00000162517 PEF1 -793863 sc-eQTL 5.62e-01 0.0358 0.0617 0.327 CD4_Naive L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 8.84e-01 0.00838 0.0572 0.327 CD4_Naive L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 9.83e-01 -0.00144 0.0657 0.327 CD4_Naive L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 1.80e-01 -0.125 0.093 0.327 CD4_TCM L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 2.15e-01 -0.0934 0.0751 0.327 CD4_TCM L2
ENSG00000134644 PUM1 -214958 sc-eQTL 2.48e-01 -0.0769 0.0665 0.327 CD4_TCM L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 1.02e-01 0.0904 0.055 0.327 CD4_TCM L2
ENSG00000162517 PEF1 -793863 sc-eQTL 5.00e-01 0.0501 0.0741 0.327 CD4_TCM L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 6.72e-01 0.0298 0.0702 0.327 CD4_TCM L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 1.58e-01 -0.11 0.0778 0.327 CD4_TCM L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 4.43e-01 0.0724 0.0943 0.327 CD4_TEM L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 2.85e-01 0.0962 0.0898 0.327 CD4_TEM L2
ENSG00000134644 PUM1 -214958 sc-eQTL 2.02e-01 0.0955 0.0747 0.327 CD4_TEM L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 7.49e-01 0.0243 0.0758 0.327 CD4_TEM L2
ENSG00000162517 PEF1 -793863 sc-eQTL 3.60e-01 0.0778 0.0848 0.327 CD4_TEM L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 4.40e-01 0.0686 0.0886 0.327 CD4_TEM L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 4.94e-01 -0.0598 0.0873 0.327 CD4_TEM L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 4.63e-01 0.0753 0.102 0.327 CD8_CTL L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 4.61e-01 0.0581 0.0786 0.327 CD8_CTL L2
ENSG00000134644 PUM1 -214958 sc-eQTL 4.06e-01 0.0636 0.0763 0.327 CD8_CTL L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 8.50e-01 -0.016 0.0846 0.327 CD8_CTL L2
ENSG00000162517 PEF1 -793863 sc-eQTL 4.13e-01 0.0603 0.0736 0.327 CD8_CTL L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 2.30e-01 -0.107 0.0886 0.327 CD8_CTL L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 3.24e-01 -0.0825 0.0835 0.327 CD8_CTL L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 5.60e-01 0.0547 0.0939 0.327 CD8_Naive L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 8.76e-01 -0.0126 0.081 0.327 CD8_Naive L2
ENSG00000134644 PUM1 -214958 sc-eQTL 1.96e-02 0.151 0.0644 0.327 CD8_Naive L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 3.27e-01 0.0612 0.0623 0.327 CD8_Naive L2
ENSG00000162517 PEF1 -793863 sc-eQTL 1.29e-01 -0.132 0.0864 0.327 CD8_Naive L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 8.08e-01 -0.019 0.078 0.327 CD8_Naive L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 1.40e-01 -0.125 0.0845 0.327 CD8_Naive L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 8.21e-01 0.0242 0.107 0.329 CD8_TCM L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 8.44e-01 -0.0192 0.0976 0.329 CD8_TCM L2
ENSG00000134644 PUM1 -214958 sc-eQTL 9.74e-02 -0.152 0.0912 0.329 CD8_TCM L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 4.29e-01 -0.0761 0.0959 0.329 CD8_TCM L2
ENSG00000162517 PEF1 -793863 sc-eQTL 4.93e-01 0.0673 0.0981 0.329 CD8_TCM L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 7.70e-01 0.026 0.0889 0.329 CD8_TCM L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 5.16e-01 -0.0585 0.0898 0.329 CD8_TCM L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 5.48e-02 0.188 0.0973 0.317 CD8_TEM L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 1.18e-01 0.147 0.0935 0.317 CD8_TEM L2
ENSG00000134644 PUM1 -214958 sc-eQTL 3.26e-01 -0.0945 0.096 0.317 CD8_TEM L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 9.87e-02 0.149 0.0898 0.317 CD8_TEM L2
ENSG00000162517 PEF1 -793863 sc-eQTL 4.90e-01 0.0588 0.0851 0.317 CD8_TEM L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 8.24e-01 -0.0209 0.0939 0.317 CD8_TEM L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 2.37e-01 0.1 0.0847 0.317 CD8_TEM L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 2.01e-01 0.129 0.1 0.327 MAIT L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 7.00e-01 -0.0345 0.0894 0.327 MAIT L2
ENSG00000134644 PUM1 -214958 sc-eQTL 7.75e-01 -0.0245 0.0857 0.327 MAIT L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 8.59e-01 -0.0144 0.0808 0.327 MAIT L2
ENSG00000162517 PEF1 -793863 sc-eQTL 1.85e-01 0.118 0.0884 0.327 MAIT L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 4.81e-01 -0.0634 0.0899 0.327 MAIT L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 6.61e-01 -0.0408 0.0927 0.327 MAIT L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 5.69e-01 -0.0575 0.101 0.329 NK_CD56bright L2
ENSG00000121753 ADGRB2 -913860 sc-eQTL 4.16e-01 0.0642 0.0789 0.329 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 1.83e-01 0.113 0.0849 0.329 NK_CD56bright L2
ENSG00000134644 PUM1 -214958 sc-eQTL 7.99e-01 0.0229 0.0896 0.329 NK_CD56bright L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 7.83e-01 0.0244 0.0883 0.329 NK_CD56bright L2
ENSG00000162517 PEF1 -793863 sc-eQTL 1.16e-01 -0.134 0.0853 0.329 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 6.52e-03 0.24 0.0872 0.329 NK_CD56bright L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 1.93e-01 0.114 0.0871 0.329 NK_CD56bright L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 8.22e-01 -0.0213 0.0949 0.328 NK_CD56dim L2
ENSG00000121753 ADGRB2 -913860 sc-eQTL 3.10e-01 0.0848 0.0833 0.328 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 3.52e-01 0.0654 0.0701 0.328 NK_CD56dim L2
ENSG00000134644 PUM1 -214958 sc-eQTL 3.28e-01 0.0705 0.0719 0.328 NK_CD56dim L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 8.58e-01 0.0137 0.0768 0.328 NK_CD56dim L2
ENSG00000162517 PEF1 -793863 sc-eQTL 5.04e-01 -0.0458 0.0683 0.328 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 8.76e-01 -0.015 0.0962 0.328 NK_CD56dim L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 2.84e-02 -0.173 0.0785 0.328 NK_CD56dim L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 3.74e-01 -0.0894 0.1 0.333 NK_HLA L2
ENSG00000121753 ADGRB2 -913860 sc-eQTL 7.00e-01 -0.0307 0.0797 0.333 NK_HLA L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 8.33e-01 0.019 0.0897 0.333 NK_HLA L2
ENSG00000134644 PUM1 -214958 sc-eQTL 2.81e-02 0.191 0.0863 0.333 NK_HLA L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 8.27e-01 0.0182 0.0834 0.333 NK_HLA L2
ENSG00000162517 PEF1 -793863 sc-eQTL 5.46e-01 0.0569 0.0939 0.333 NK_HLA L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 6.41e-01 -0.0414 0.0887 0.333 NK_HLA L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 2.59e-03 -0.256 0.0838 0.333 NK_HLA L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 4.36e-01 0.0725 0.0929 0.328 NK_cytokine L2
ENSG00000121753 ADGRB2 -913860 sc-eQTL 3.92e-02 -0.173 0.0832 0.328 NK_cytokine L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 2.21e-01 0.0888 0.0724 0.328 NK_cytokine L2
ENSG00000134644 PUM1 -214958 sc-eQTL 1.80e-02 0.185 0.0775 0.328 NK_cytokine L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 8.21e-01 0.0196 0.0864 0.328 NK_cytokine L2
ENSG00000162517 PEF1 -793863 sc-eQTL 6.66e-01 0.0318 0.0736 0.328 NK_cytokine L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 5.15e-01 0.0597 0.0915 0.328 NK_cytokine L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 7.35e-01 0.0289 0.0852 0.328 NK_cytokine L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 5.17e-01 -0.0707 0.109 0.319 PB L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 5.88e-01 -0.0686 0.126 0.319 PB L2
ENSG00000134644 PUM1 -214958 sc-eQTL 5.46e-02 0.21 0.108 0.319 PB L2
ENSG00000162510 MATN1 127448 sc-eQTL 8.33e-01 -0.0217 0.102 0.319 PB L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 3.62e-01 0.0667 0.0729 0.319 PB L2
ENSG00000162517 PEF1 -793863 sc-eQTL 6.70e-01 -0.0481 0.113 0.319 PB L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 6.27e-01 -0.0487 0.1 0.319 PB L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 3.90e-01 -0.0917 0.106 0.319 PB L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 7.21e-01 0.0261 0.073 0.328 Pro_T L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 7.41e-01 0.0306 0.0926 0.328 Pro_T L2
ENSG00000134644 PUM1 -214958 sc-eQTL 6.75e-01 0.0363 0.0864 0.328 Pro_T L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 1.90e-01 0.0812 0.0617 0.328 Pro_T L2
ENSG00000162517 PEF1 -793863 sc-eQTL 8.29e-01 0.0196 0.091 0.328 Pro_T L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 8.34e-02 0.15 0.086 0.328 Pro_T L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 4.26e-01 -0.0635 0.0796 0.328 Pro_T L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 6.16e-01 0.0488 0.0971 0.327 Treg L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 3.80e-01 0.0826 0.0939 0.327 Treg L2
ENSG00000134644 PUM1 -214958 sc-eQTL 3.39e-01 0.072 0.0751 0.327 Treg L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 6.91e-01 0.0342 0.0861 0.327 Treg L2
ENSG00000162517 PEF1 -793863 sc-eQTL 4.27e-02 -0.188 0.0922 0.327 Treg L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 1.72e-01 -0.12 0.0874 0.327 Treg L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 9.56e-01 -0.00486 0.0877 0.327 Treg L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 8.75e-02 0.166 0.0968 0.327 cDC L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 3.20e-01 -0.105 0.105 0.327 cDC L2
ENSG00000134644 PUM1 -214958 sc-eQTL 2.17e-01 0.112 0.0904 0.327 cDC L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 2.81e-01 -0.0686 0.0634 0.327 cDC L2
ENSG00000162517 PEF1 -793863 sc-eQTL 3.57e-01 0.0849 0.0919 0.327 cDC L2
ENSG00000168528 SERINC2 -558532 sc-eQTL 1.48e-01 0.118 0.0812 0.327 cDC L2
ENSG00000284543 LINC01226 -655193 sc-eQTL 6.21e-01 -0.0397 0.0802 0.327 cDC L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 8.99e-01 -0.011 0.0864 0.327 cDC L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 9.76e-01 -0.00232 0.0774 0.327 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 8.08e-01 -0.021 0.0863 0.327 cMono_IL1B L2
ENSG00000134644 PUM1 -214958 sc-eQTL 1.49e-01 -0.0841 0.0581 0.327 cMono_IL1B L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 8.94e-01 0.00685 0.0513 0.327 cMono_IL1B L2
ENSG00000162512 SDC3 -57725 sc-eQTL 2.44e-02 0.216 0.0954 0.327 cMono_IL1B L2
ENSG00000162517 PEF1 -793863 sc-eQTL 4.16e-01 0.0643 0.0788 0.327 cMono_IL1B L2
ENSG00000168528 SERINC2 -558532 sc-eQTL 3.48e-01 0.0918 0.0975 0.327 cMono_IL1B L2
ENSG00000284543 LINC01226 -655193 sc-eQTL 4.12e-01 0.0709 0.0863 0.327 cMono_IL1B L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 2.68e-01 -0.0892 0.0804 0.327 cMono_IL1B L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 4.81e-01 0.0578 0.082 0.327 cMono_S100A L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 9.55e-03 -0.25 0.0955 0.327 cMono_S100A L2
ENSG00000134644 PUM1 -214958 sc-eQTL 8.14e-02 -0.122 0.0696 0.327 cMono_S100A L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 9.20e-01 0.00539 0.0539 0.327 cMono_S100A L2
ENSG00000162512 SDC3 -57725 sc-eQTL 1.88e-01 0.122 0.0927 0.327 cMono_S100A L2
ENSG00000162517 PEF1 -793863 sc-eQTL 3.81e-02 0.174 0.0832 0.327 cMono_S100A L2
ENSG00000168528 SERINC2 -558532 sc-eQTL 7.55e-01 0.0308 0.0985 0.327 cMono_S100A L2
ENSG00000284543 LINC01226 -655193 sc-eQTL 8.21e-01 -0.0181 0.08 0.327 cMono_S100A L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 1.76e-01 0.109 0.08 0.327 cMono_S100A L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 3.08e-01 0.122 0.12 0.318 gdT L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 7.30e-01 0.0356 0.103 0.318 gdT L2
ENSG00000134644 PUM1 -214958 sc-eQTL 8.12e-01 0.0254 0.106 0.318 gdT L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 4.48e-02 0.23 0.114 0.318 gdT L2
ENSG00000162517 PEF1 -793863 sc-eQTL 7.43e-01 -0.0347 0.106 0.318 gdT L2
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 7.98e-01 0.0273 0.107 0.318 gdT L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 7.43e-02 0.183 0.102 0.318 gdT L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 4.74e-01 0.0656 0.0914 0.324 intMono L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 6.13e-02 -0.184 0.0976 0.324 intMono L2
ENSG00000134644 PUM1 -214958 sc-eQTL 4.79e-01 -0.0591 0.0834 0.324 intMono L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 5.24e-01 -0.0418 0.0655 0.324 intMono L2
ENSG00000162512 SDC3 -57725 sc-eQTL 4.84e-01 -0.0629 0.0896 0.324 intMono L2
ENSG00000162517 PEF1 -793863 sc-eQTL 8.30e-02 -0.163 0.0936 0.324 intMono L2
ENSG00000168528 SERINC2 -558532 sc-eQTL 2.56e-01 0.107 0.0936 0.324 intMono L2
ENSG00000284543 LINC01226 -655193 sc-eQTL 7.27e-01 0.0311 0.089 0.324 intMono L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 1.19e-01 -0.138 0.0885 0.324 intMono L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 5.90e-01 0.046 0.0851 0.324 ncMono L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 5.15e-01 -0.0592 0.0907 0.324 ncMono L2
ENSG00000134644 PUM1 -214958 sc-eQTL 9.31e-01 -0.00641 0.0742 0.324 ncMono L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 4.54e-01 -0.0505 0.0673 0.324 ncMono L2
ENSG00000162512 SDC3 -57725 sc-eQTL 5.33e-01 -0.0471 0.0755 0.324 ncMono L2
ENSG00000162517 PEF1 -793863 sc-eQTL 7.65e-01 -0.0259 0.0866 0.324 ncMono L2
ENSG00000168528 SERINC2 -558532 sc-eQTL 1.70e-01 0.113 0.0821 0.324 ncMono L2
ENSG00000284543 LINC01226 -655193 sc-eQTL 6.88e-01 -0.0332 0.0824 0.324 ncMono L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 9.97e-01 -0.000332 0.0854 0.324 ncMono L2
ENSG00000060688 SNRNP40 -445755 sc-eQTL 5.27e-01 -0.0621 0.0979 0.325 pDC L2
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 1.54e-01 0.153 0.107 0.325 pDC L2
ENSG00000134644 PUM1 -214958 sc-eQTL 8.22e-01 -0.0201 0.0892 0.325 pDC L2
ENSG00000162511 LAPTM5 93259 sc-eQTL 8.58e-01 0.0148 0.083 0.325 pDC L2
ENSG00000162517 PEF1 -793863 sc-eQTL 8.60e-01 0.0191 0.108 0.325 pDC L2
ENSG00000168528 SERINC2 -558532 sc-eQTL 9.84e-01 -0.00202 0.101 0.325 pDC L2
ENSG00000284543 LINC01226 -655193 sc-eQTL 1.23e-01 -0.12 0.0775 0.325 pDC L2
ENSG00000287510 AL137857.1 119340 sc-eQTL 2.32e-01 -0.11 0.0915 0.325 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -445755 sc-eQTL 8.03e-01 0.0242 0.097 0.327 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 4.46e-01 -0.0616 0.0806 0.327 B_Memory LOneK1K
ENSG00000134644 PUM1 -214958 sc-eQTL 7.74e-01 0.0205 0.0715 0.327 B_Memory LOneK1K
ENSG00000162510 MATN1 127448 sc-eQTL 1.98e-01 0.105 0.0813 0.327 B_Memory LOneK1K
ENSG00000162511 LAPTM5 93259 sc-eQTL 7.18e-01 0.0185 0.0512 0.327 B_Memory LOneK1K
ENSG00000162517 PEF1 -793863 sc-eQTL 1.73e-01 0.116 0.0845 0.327 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 9.48e-01 -0.00443 0.0678 0.327 B_Memory LOneK1K
ENSG00000287510 AL137857.1 119340 sc-eQTL 3.78e-01 -0.0652 0.0738 0.327 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -445755 sc-eQTL 4.08e-01 -0.0728 0.0878 0.327 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 2.29e-01 0.0836 0.0693 0.327 B_Naive LOneK1K
ENSG00000134644 PUM1 -214958 sc-eQTL 2.31e-01 0.0787 0.0656 0.327 B_Naive LOneK1K
ENSG00000162510 MATN1 127448 sc-eQTL 5.69e-01 0.0361 0.0633 0.327 B_Naive LOneK1K
ENSG00000162511 LAPTM5 93259 sc-eQTL 3.21e-01 0.0442 0.0445 0.327 B_Naive LOneK1K
ENSG00000162517 PEF1 -793863 sc-eQTL 9.45e-01 -0.00564 0.0814 0.327 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 8.81e-01 -0.00863 0.0576 0.327 B_Naive LOneK1K
ENSG00000287510 AL137857.1 119340 sc-eQTL 9.15e-01 -0.00729 0.0684 0.327 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -445755 sc-eQTL 5.65e-01 0.0423 0.0735 0.327 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 8.73e-02 -0.142 0.0827 0.327 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -214958 sc-eQTL 7.97e-02 -0.0929 0.0527 0.327 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 93259 sc-eQTL 9.22e-01 -0.00457 0.0467 0.327 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -57725 sc-eQTL 1.16e-02 0.239 0.0938 0.327 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -793863 sc-eQTL 4.70e-02 0.133 0.0663 0.327 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -558532 sc-eQTL 4.62e-01 0.0722 0.0979 0.327 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -655193 sc-eQTL 6.65e-01 0.0349 0.0803 0.327 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 119340 sc-eQTL 6.47e-01 -0.0344 0.0752 0.327 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -445755 sc-eQTL 1.84e-01 0.107 0.08 0.328 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 4.88e-02 -0.173 0.0871 0.328 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -214958 sc-eQTL 7.08e-01 -0.027 0.072 0.328 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 93259 sc-eQTL 5.38e-01 -0.0356 0.0576 0.328 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -57725 sc-eQTL 9.64e-01 0.00385 0.0842 0.328 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -793863 sc-eQTL 3.17e-01 -0.0766 0.0763 0.328 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -558532 sc-eQTL 1.37e-01 0.13 0.0869 0.328 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -655193 sc-eQTL 8.37e-01 0.017 0.0829 0.328 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 119340 sc-eQTL 4.66e-01 -0.0605 0.0829 0.328 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -445755 sc-eQTL 8.64e-01 -0.0155 0.0904 0.328 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -913860 sc-eQTL 8.37e-01 -0.0158 0.077 0.328 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -445949 sc-eQTL 1.45e-01 0.09 0.0615 0.328 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -214958 sc-eQTL 2.40e-02 0.152 0.0669 0.328 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 93259 sc-eQTL 9.27e-01 0.00693 0.0756 0.328 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -793863 sc-eQTL 6.63e-01 -0.0251 0.0574 0.328 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 132529 sc-eQTL 8.82e-01 0.013 0.0872 0.328 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 119340 sc-eQTL 1.72e-01 -0.103 0.075 0.328 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162510 MATN1 127448 eQTL 0.022 -0.0487 0.0212 0.0 0.0 0.303
ENSG00000168528 SERINC2 -558532 eQTL 0.0158 0.101 0.0417 0.0 0.0 0.303

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina