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Genes within 1Mb (chr1:30842746:G:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -454042 sc-eQTL 5.14e-01 0.0574 0.0877 0.705 B L1
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 7.68e-01 -0.0208 0.0703 0.705 B L1
ENSG00000134644 PUM1 -223245 sc-eQTL 1.21e-01 -0.0914 0.0587 0.705 B L1
ENSG00000162510 MATN1 119161 sc-eQTL 8.61e-01 0.0109 0.062 0.705 B L1
ENSG00000162511 LAPTM5 84972 sc-eQTL 3.38e-02 -0.103 0.0481 0.705 B L1
ENSG00000162517 PEF1 -802150 sc-eQTL 7.16e-03 -0.196 0.0721 0.705 B L1
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 8.29e-01 -0.0123 0.0569 0.705 B L1
ENSG00000287510 AL137857.1 111053 sc-eQTL 6.25e-01 -0.0329 0.0673 0.705 B L1
ENSG00000060688 SNRNP40 -454042 sc-eQTL 4.49e-01 -0.0548 0.0721 0.705 CD4T L1
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 1.79e-01 0.0757 0.0562 0.705 CD4T L1
ENSG00000134644 PUM1 -223245 sc-eQTL 7.25e-01 -0.0177 0.0502 0.705 CD4T L1
ENSG00000162511 LAPTM5 84972 sc-eQTL 8.53e-01 -0.0103 0.0557 0.705 CD4T L1
ENSG00000162517 PEF1 -802150 sc-eQTL 8.51e-01 -0.0109 0.0582 0.705 CD4T L1
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 6.72e-01 0.0211 0.0498 0.705 CD4T L1
ENSG00000287510 AL137857.1 111053 sc-eQTL 9.45e-01 -0.00412 0.0596 0.705 CD4T L1
ENSG00000060688 SNRNP40 -454042 sc-eQTL 3.66e-01 -0.0875 0.0967 0.705 CD8T L1
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 9.14e-01 0.00698 0.0645 0.705 CD8T L1
ENSG00000134644 PUM1 -223245 sc-eQTL 7.00e-01 0.0219 0.0567 0.705 CD8T L1
ENSG00000162511 LAPTM5 84972 sc-eQTL 2.60e-01 0.0621 0.0549 0.705 CD8T L1
ENSG00000162517 PEF1 -802150 sc-eQTL 8.11e-01 -0.0163 0.0679 0.705 CD8T L1
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 8.74e-01 -0.0102 0.0646 0.705 CD8T L1
ENSG00000287510 AL137857.1 111053 sc-eQTL 1.80e-01 -0.109 0.0808 0.705 CD8T L1
ENSG00000060688 SNRNP40 -454042 sc-eQTL 1.51e-01 0.123 0.0852 0.707 DC L1
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 2.48e-01 0.117 0.101 0.707 DC L1
ENSG00000134644 PUM1 -223245 sc-eQTL 7.10e-01 -0.0296 0.0794 0.707 DC L1
ENSG00000162511 LAPTM5 84972 sc-eQTL 7.52e-01 -0.018 0.0567 0.707 DC L1
ENSG00000162517 PEF1 -802150 sc-eQTL 1.58e-01 0.13 0.0915 0.707 DC L1
ENSG00000168528 SERINC2 -566819 sc-eQTL 7.80e-01 0.0262 0.0935 0.707 DC L1
ENSG00000284543 LINC01226 -663480 sc-eQTL 7.57e-01 0.0192 0.0619 0.707 DC L1
ENSG00000287510 AL137857.1 111053 sc-eQTL 7.60e-01 0.0274 0.0897 0.707 DC L1
ENSG00000060688 SNRNP40 -454042 sc-eQTL 7.04e-01 0.0251 0.0658 0.705 Mono L1
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 4.83e-01 -0.0573 0.0816 0.705 Mono L1
ENSG00000134644 PUM1 -223245 sc-eQTL 5.24e-02 -0.101 0.0519 0.705 Mono L1
ENSG00000162511 LAPTM5 84972 sc-eQTL 1.32e-01 -0.0724 0.0479 0.705 Mono L1
ENSG00000162512 SDC3 -66012 sc-eQTL 9.24e-01 -0.00889 0.0925 0.705 Mono L1
ENSG00000162517 PEF1 -802150 sc-eQTL 1.04e-02 -0.165 0.0639 0.705 Mono L1
ENSG00000168528 SERINC2 -566819 sc-eQTL 2.98e-01 0.103 0.099 0.705 Mono L1
ENSG00000284543 LINC01226 -663480 sc-eQTL 8.93e-01 0.0118 0.0875 0.705 Mono L1
ENSG00000287510 AL137857.1 111053 sc-eQTL 8.83e-03 -0.199 0.0752 0.705 Mono L1
ENSG00000060688 SNRNP40 -454042 sc-eQTL 1.47e-01 -0.134 0.0919 0.704 NK L1
ENSG00000121753 ADGRB2 -922147 sc-eQTL 4.23e-01 0.0637 0.0794 0.704 NK L1
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 6.42e-01 -0.0294 0.0632 0.704 NK L1
ENSG00000134644 PUM1 -223245 sc-eQTL 1.04e-01 -0.108 0.0659 0.704 NK L1
ENSG00000162511 LAPTM5 84972 sc-eQTL 2.38e-02 0.172 0.0754 0.704 NK L1
ENSG00000162517 PEF1 -802150 sc-eQTL 4.63e-01 -0.041 0.0557 0.704 NK L1
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 4.88e-01 0.0596 0.0857 0.704 NK L1
ENSG00000287510 AL137857.1 111053 sc-eQTL 6.23e-01 0.039 0.0792 0.704 NK L1
ENSG00000060688 SNRNP40 -454042 sc-eQTL 7.63e-01 0.0213 0.0706 0.705 Other_T L1
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 3.86e-01 0.0654 0.0753 0.705 Other_T L1
ENSG00000134644 PUM1 -223245 sc-eQTL 8.05e-01 0.0168 0.0678 0.705 Other_T L1
ENSG00000162511 LAPTM5 84972 sc-eQTL 6.17e-01 -0.0278 0.0556 0.705 Other_T L1
ENSG00000162517 PEF1 -802150 sc-eQTL 7.40e-01 -0.0247 0.0743 0.705 Other_T L1
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 1.26e-01 -0.139 0.0906 0.705 Other_T L1
ENSG00000287510 AL137857.1 111053 sc-eQTL 8.00e-01 -0.024 0.0948 0.705 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -454042 sc-eQTL 4.27e-01 0.0875 0.11 0.691 B_Activated L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 1.85e-01 0.147 0.111 0.691 B_Activated L2
ENSG00000134644 PUM1 -223245 sc-eQTL 1.35e-01 -0.154 0.103 0.691 B_Activated L2
ENSG00000162510 MATN1 119161 sc-eQTL 2.09e-01 0.113 0.0899 0.691 B_Activated L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 5.64e-01 -0.0364 0.0629 0.691 B_Activated L2
ENSG00000162517 PEF1 -802150 sc-eQTL 3.04e-01 -0.11 0.107 0.691 B_Activated L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 6.02e-01 -0.0531 0.102 0.691 B_Activated L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 6.30e-02 -0.167 0.0891 0.691 B_Activated L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 1.19e-01 0.165 0.106 0.704 B_Intermediate L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 5.34e-01 -0.0551 0.0884 0.704 B_Intermediate L2
ENSG00000134644 PUM1 -223245 sc-eQTL 6.51e-01 -0.0378 0.0834 0.704 B_Intermediate L2
ENSG00000162510 MATN1 119161 sc-eQTL 6.44e-01 -0.0402 0.0868 0.704 B_Intermediate L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 1.72e-01 -0.0726 0.0531 0.704 B_Intermediate L2
ENSG00000162517 PEF1 -802150 sc-eQTL 2.20e-02 -0.226 0.0977 0.704 B_Intermediate L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 1.61e-01 0.105 0.0745 0.704 B_Intermediate L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 2.92e-01 -0.0883 0.0835 0.704 B_Intermediate L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 2.46e-01 0.118 0.102 0.707 B_Memory L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 7.09e-01 -0.0352 0.0941 0.707 B_Memory L2
ENSG00000134644 PUM1 -223245 sc-eQTL 8.47e-01 -0.0159 0.0819 0.707 B_Memory L2
ENSG00000162510 MATN1 119161 sc-eQTL 3.75e-01 -0.0695 0.0782 0.707 B_Memory L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 4.03e-01 -0.0581 0.0693 0.707 B_Memory L2
ENSG00000162517 PEF1 -802150 sc-eQTL 1.27e-02 -0.23 0.0914 0.707 B_Memory L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 1.01e-01 -0.13 0.079 0.707 B_Memory L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 1.45e-01 -0.135 0.0926 0.707 B_Memory L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 4.99e-01 0.0625 0.0922 0.705 B_Naive1 L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 9.90e-01 -0.00101 0.0797 0.705 B_Naive1 L2
ENSG00000134644 PUM1 -223245 sc-eQTL 5.70e-01 0.04 0.0703 0.705 B_Naive1 L2
ENSG00000162510 MATN1 119161 sc-eQTL 6.80e-01 0.0295 0.0713 0.705 B_Naive1 L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 1.67e-01 -0.0658 0.0474 0.705 B_Naive1 L2
ENSG00000162517 PEF1 -802150 sc-eQTL 4.82e-01 0.0591 0.0839 0.705 B_Naive1 L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 8.41e-01 -0.0125 0.0626 0.705 B_Naive1 L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 4.33e-01 -0.0607 0.0772 0.705 B_Naive1 L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 7.87e-01 -0.0266 0.0985 0.706 B_Naive2 L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 6.89e-01 0.0326 0.0813 0.706 B_Naive2 L2
ENSG00000134644 PUM1 -223245 sc-eQTL 2.58e-01 -0.0901 0.0794 0.706 B_Naive2 L2
ENSG00000162510 MATN1 119161 sc-eQTL 4.81e-01 0.0539 0.0763 0.706 B_Naive2 L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 2.74e-01 -0.0567 0.0518 0.706 B_Naive2 L2
ENSG00000162517 PEF1 -802150 sc-eQTL 9.75e-01 0.00296 0.0944 0.706 B_Naive2 L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 6.05e-02 -0.141 0.0749 0.706 B_Naive2 L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 4.71e-01 0.0589 0.0815 0.706 B_Naive2 L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 6.60e-01 0.0444 0.101 0.702 CD4_CTL L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 4.82e-01 -0.0697 0.099 0.702 CD4_CTL L2
ENSG00000134644 PUM1 -223245 sc-eQTL 7.66e-01 0.0289 0.0972 0.702 CD4_CTL L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 9.85e-01 0.00161 0.0866 0.702 CD4_CTL L2
ENSG00000162517 PEF1 -802150 sc-eQTL 3.47e-01 0.0836 0.0886 0.702 CD4_CTL L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 5.88e-01 0.0513 0.0947 0.702 CD4_CTL L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 7.73e-01 0.0242 0.0836 0.702 CD4_CTL L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 2.05e-01 -0.0955 0.0752 0.705 CD4_Naive L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 3.69e-02 0.139 0.0662 0.705 CD4_Naive L2
ENSG00000134644 PUM1 -223245 sc-eQTL 5.30e-01 -0.0336 0.0534 0.705 CD4_Naive L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 4.78e-01 -0.0407 0.0572 0.705 CD4_Naive L2
ENSG00000162517 PEF1 -802150 sc-eQTL 1.76e-01 -0.0849 0.0625 0.705 CD4_Naive L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 9.47e-01 0.00387 0.0581 0.705 CD4_Naive L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 5.20e-01 -0.043 0.0667 0.705 CD4_Naive L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 8.66e-01 0.0161 0.0954 0.705 CD4_TCM L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 2.54e-01 -0.0877 0.0767 0.705 CD4_TCM L2
ENSG00000134644 PUM1 -223245 sc-eQTL 8.89e-01 -0.00948 0.0681 0.705 CD4_TCM L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 4.06e-01 0.047 0.0564 0.705 CD4_TCM L2
ENSG00000162517 PEF1 -802150 sc-eQTL 2.57e-01 0.0857 0.0755 0.705 CD4_TCM L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 7.56e-01 0.0223 0.0716 0.705 CD4_TCM L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 5.12e-01 0.0523 0.0797 0.705 CD4_TCM L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 3.11e-01 -0.0957 0.0943 0.705 CD4_TEM L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 2.18e-01 0.111 0.0898 0.705 CD4_TEM L2
ENSG00000134644 PUM1 -223245 sc-eQTL 4.03e-01 -0.0628 0.0749 0.705 CD4_TEM L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 7.49e-01 0.0244 0.0759 0.705 CD4_TEM L2
ENSG00000162517 PEF1 -802150 sc-eQTL 4.79e-01 0.0602 0.0849 0.705 CD4_TEM L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 2.16e-01 0.11 0.0885 0.705 CD4_TEM L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 9.14e-01 0.00941 0.0875 0.705 CD4_TEM L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 9.96e-01 0.00057 0.108 0.705 CD8_CTL L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 3.91e-01 -0.0708 0.0823 0.705 CD8_CTL L2
ENSG00000134644 PUM1 -223245 sc-eQTL 7.16e-01 0.0292 0.0801 0.705 CD8_CTL L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 6.83e-02 0.161 0.088 0.705 CD8_CTL L2
ENSG00000162517 PEF1 -802150 sc-eQTL 1.78e-02 0.182 0.0762 0.705 CD8_CTL L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 7.75e-01 -0.0267 0.0932 0.705 CD8_CTL L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 7.00e-01 0.0338 0.0877 0.705 CD8_CTL L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 1.97e-01 -0.123 0.0952 0.705 CD8_Naive L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 6.38e-01 -0.0388 0.0824 0.705 CD8_Naive L2
ENSG00000134644 PUM1 -223245 sc-eQTL 6.70e-01 -0.0283 0.0663 0.705 CD8_Naive L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 2.28e-01 -0.0765 0.0633 0.705 CD8_Naive L2
ENSG00000162517 PEF1 -802150 sc-eQTL 7.24e-01 -0.0312 0.0883 0.705 CD8_Naive L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 8.89e-01 0.0111 0.0793 0.705 CD8_Naive L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 8.20e-02 -0.15 0.0857 0.705 CD8_Naive L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 7.39e-01 -0.0354 0.106 0.711 CD8_TCM L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 5.82e-01 -0.0536 0.0972 0.711 CD8_TCM L2
ENSG00000134644 PUM1 -223245 sc-eQTL 5.76e-01 0.0511 0.0914 0.711 CD8_TCM L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 5.03e-01 -0.0641 0.0956 0.711 CD8_TCM L2
ENSG00000162517 PEF1 -802150 sc-eQTL 4.52e-01 -0.0737 0.0977 0.711 CD8_TCM L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 6.68e-01 -0.038 0.0886 0.711 CD8_TCM L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 6.05e-01 -0.0464 0.0895 0.711 CD8_TCM L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 8.87e-01 0.0149 0.105 0.71 CD8_TEM L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 2.95e-01 0.106 0.1 0.71 CD8_TEM L2
ENSG00000134644 PUM1 -223245 sc-eQTL 9.25e-01 -0.00976 0.103 0.71 CD8_TEM L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 5.41e-01 -0.0593 0.0967 0.71 CD8_TEM L2
ENSG00000162517 PEF1 -802150 sc-eQTL 3.48e-01 -0.0855 0.0909 0.71 CD8_TEM L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 2.09e-01 0.126 0.1 0.71 CD8_TEM L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 4.58e-01 -0.0675 0.0908 0.71 CD8_TEM L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 8.11e-01 -0.0244 0.102 0.708 MAIT L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 9.64e-02 0.15 0.0897 0.708 MAIT L2
ENSG00000134644 PUM1 -223245 sc-eQTL 8.53e-02 0.149 0.0859 0.708 MAIT L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 9.81e-01 -0.00194 0.0816 0.708 MAIT L2
ENSG00000162517 PEF1 -802150 sc-eQTL 6.14e-01 -0.0452 0.0896 0.708 MAIT L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 8.14e-01 -0.0214 0.0909 0.708 MAIT L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 8.60e-01 -0.0165 0.0937 0.708 MAIT L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 4.79e-01 -0.0752 0.106 0.702 NK_CD56bright L2
ENSG00000121753 ADGRB2 -922147 sc-eQTL 2.07e-01 -0.105 0.0827 0.702 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 7.42e-01 -0.0296 0.0896 0.702 NK_CD56bright L2
ENSG00000134644 PUM1 -223245 sc-eQTL 5.27e-01 -0.0596 0.094 0.702 NK_CD56bright L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 4.11e-01 0.0763 0.0927 0.702 NK_CD56bright L2
ENSG00000162517 PEF1 -802150 sc-eQTL 6.06e-01 -0.0465 0.0901 0.702 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 3.98e-01 -0.0788 0.0931 0.702 NK_CD56bright L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 7.94e-01 -0.024 0.0919 0.702 NK_CD56bright L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 3.05e-01 -0.1 0.0976 0.703 NK_CD56dim L2
ENSG00000121753 ADGRB2 -922147 sc-eQTL 3.66e-01 0.0778 0.0859 0.703 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 5.79e-01 0.0402 0.0723 0.703 NK_CD56dim L2
ENSG00000134644 PUM1 -223245 sc-eQTL 2.45e-01 -0.0862 0.074 0.703 NK_CD56dim L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 2.30e-02 0.179 0.0782 0.703 NK_CD56dim L2
ENSG00000162517 PEF1 -802150 sc-eQTL 6.52e-01 -0.0318 0.0704 0.703 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 3.77e-01 0.0876 0.099 0.703 NK_CD56dim L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 8.12e-01 0.0195 0.0818 0.703 NK_CD56dim L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 4.98e-01 -0.0731 0.108 0.699 NK_HLA L2
ENSG00000121753 ADGRB2 -922147 sc-eQTL 6.80e-01 0.0354 0.0856 0.699 NK_HLA L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 9.56e-01 0.00529 0.0963 0.699 NK_HLA L2
ENSG00000134644 PUM1 -223245 sc-eQTL 3.13e-01 -0.0947 0.0936 0.699 NK_HLA L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 9.69e-01 0.00351 0.0895 0.699 NK_HLA L2
ENSG00000162517 PEF1 -802150 sc-eQTL 4.44e-01 -0.0773 0.101 0.699 NK_HLA L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 5.53e-03 0.262 0.0934 0.699 NK_HLA L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 9.82e-01 -0.00213 0.0921 0.699 NK_HLA L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 9.71e-01 -0.00355 0.0967 0.703 NK_cytokine L2
ENSG00000121753 ADGRB2 -922147 sc-eQTL 2.16e-01 0.108 0.0871 0.703 NK_cytokine L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 2.01e-01 -0.0964 0.0752 0.703 NK_cytokine L2
ENSG00000134644 PUM1 -223245 sc-eQTL 2.61e-01 -0.0918 0.0814 0.703 NK_cytokine L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 2.26e-01 0.109 0.0896 0.703 NK_cytokine L2
ENSG00000162517 PEF1 -802150 sc-eQTL 2.16e-01 -0.0947 0.0763 0.703 NK_cytokine L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 2.07e-01 -0.12 0.0949 0.703 NK_cytokine L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 9.62e-01 -0.00419 0.0886 0.703 NK_cytokine L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 9.05e-01 -0.0133 0.111 0.674 PB L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 1.92e-01 -0.167 0.128 0.674 PB L2
ENSG00000134644 PUM1 -223245 sc-eQTL 8.99e-01 0.0142 0.112 0.674 PB L2
ENSG00000162510 MATN1 119161 sc-eQTL 3.97e-01 0.0883 0.104 0.674 PB L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 1.30e-01 -0.112 0.0736 0.674 PB L2
ENSG00000162517 PEF1 -802150 sc-eQTL 7.17e-01 -0.0416 0.114 0.674 PB L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 7.55e-02 0.18 0.1 0.674 PB L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 1.25e-01 0.166 0.107 0.674 PB L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 5.08e-01 0.05 0.0754 0.709 Pro_T L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 4.07e-01 -0.0794 0.0957 0.709 Pro_T L2
ENSG00000134644 PUM1 -223245 sc-eQTL 1.62e-01 -0.125 0.089 0.709 Pro_T L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 2.82e-01 0.0689 0.0639 0.709 Pro_T L2
ENSG00000162517 PEF1 -802150 sc-eQTL 3.76e-01 0.0834 0.0939 0.709 Pro_T L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 3.45e-01 -0.0846 0.0894 0.709 Pro_T L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 9.65e-01 -0.00363 0.0824 0.709 Pro_T L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 3.76e-01 -0.0869 0.0979 0.705 Treg L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 5.40e-01 0.0581 0.0948 0.705 Treg L2
ENSG00000134644 PUM1 -223245 sc-eQTL 8.95e-01 -0.0101 0.0759 0.705 Treg L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 8.92e-01 -0.0119 0.0869 0.705 Treg L2
ENSG00000162517 PEF1 -802150 sc-eQTL 6.87e-01 0.0379 0.0939 0.705 Treg L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 5.84e-02 0.167 0.0878 0.705 Treg L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 4.50e-01 -0.0669 0.0883 0.705 Treg L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 4.22e-01 0.0794 0.0987 0.705 cDC L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 5.48e-01 0.0644 0.107 0.705 cDC L2
ENSG00000134644 PUM1 -223245 sc-eQTL 7.03e-01 0.0351 0.0919 0.705 cDC L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 3.80e-01 -0.0566 0.0643 0.705 cDC L2
ENSG00000162517 PEF1 -802150 sc-eQTL 6.58e-02 0.171 0.0924 0.705 cDC L2
ENSG00000168528 SERINC2 -566819 sc-eQTL 2.04e-01 -0.105 0.0823 0.705 cDC L2
ENSG00000284543 LINC01226 -663480 sc-eQTL 6.87e-01 -0.0328 0.0812 0.705 cDC L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 6.65e-01 -0.0379 0.0874 0.705 cDC L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 9.36e-01 0.00637 0.0791 0.705 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 5.81e-01 -0.0488 0.0881 0.705 cMono_IL1B L2
ENSG00000134644 PUM1 -223245 sc-eQTL 8.49e-02 -0.103 0.0593 0.705 cMono_IL1B L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 1.02e-01 -0.0854 0.0521 0.705 cMono_IL1B L2
ENSG00000162512 SDC3 -66012 sc-eQTL 2.50e-01 -0.114 0.0984 0.705 cMono_IL1B L2
ENSG00000162517 PEF1 -802150 sc-eQTL 3.96e-01 -0.0684 0.0805 0.705 cMono_IL1B L2
ENSG00000168528 SERINC2 -566819 sc-eQTL 3.14e-01 0.101 0.0997 0.705 cMono_IL1B L2
ENSG00000284543 LINC01226 -663480 sc-eQTL 6.65e-01 0.0382 0.0883 0.705 cMono_IL1B L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 1.74e-01 -0.112 0.082 0.705 cMono_IL1B L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 3.40e-01 0.0791 0.0827 0.705 cMono_S100A L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 1.29e-01 -0.148 0.0974 0.705 cMono_S100A L2
ENSG00000134644 PUM1 -223245 sc-eQTL 9.98e-02 -0.116 0.0703 0.705 cMono_S100A L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 1.57e-02 -0.131 0.0536 0.705 cMono_S100A L2
ENSG00000162512 SDC3 -66012 sc-eQTL 8.94e-01 -0.0126 0.0939 0.705 cMono_S100A L2
ENSG00000162517 PEF1 -802150 sc-eQTL 8.45e-02 -0.146 0.0842 0.705 cMono_S100A L2
ENSG00000168528 SERINC2 -566819 sc-eQTL 3.60e-01 0.091 0.0993 0.705 cMono_S100A L2
ENSG00000284543 LINC01226 -663480 sc-eQTL 8.64e-01 0.0139 0.0808 0.705 cMono_S100A L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 6.56e-04 -0.273 0.0789 0.705 cMono_S100A L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 4.41e-01 0.0996 0.129 0.718 gdT L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 6.81e-01 0.0458 0.111 0.718 gdT L2
ENSG00000134644 PUM1 -223245 sc-eQTL 6.70e-01 -0.0489 0.114 0.718 gdT L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 1.26e-01 -0.19 0.123 0.718 gdT L2
ENSG00000162517 PEF1 -802150 sc-eQTL 5.17e-01 -0.0739 0.114 0.718 gdT L2
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 6.78e-01 -0.0477 0.115 0.718 gdT L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 5.67e-01 0.0638 0.111 0.718 gdT L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 9.77e-01 0.00264 0.0924 0.709 intMono L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 4.89e-01 0.0689 0.0993 0.709 intMono L2
ENSG00000134644 PUM1 -223245 sc-eQTL 7.87e-01 -0.0228 0.0843 0.709 intMono L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 6.38e-01 0.0311 0.0661 0.709 intMono L2
ENSG00000162512 SDC3 -66012 sc-eQTL 2.23e-01 0.11 0.0902 0.709 intMono L2
ENSG00000162517 PEF1 -802150 sc-eQTL 8.93e-01 0.0128 0.0952 0.709 intMono L2
ENSG00000168528 SERINC2 -566819 sc-eQTL 7.28e-01 0.0331 0.0948 0.709 intMono L2
ENSG00000284543 LINC01226 -663480 sc-eQTL 8.77e-01 -0.0139 0.0898 0.709 intMono L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 5.47e-01 0.0541 0.0898 0.709 intMono L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 5.20e-01 0.056 0.0867 0.701 ncMono L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 4.70e-01 0.0669 0.0924 0.701 ncMono L2
ENSG00000134644 PUM1 -223245 sc-eQTL 5.53e-01 -0.0449 0.0756 0.701 ncMono L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 9.58e-01 0.00364 0.0687 0.701 ncMono L2
ENSG00000162512 SDC3 -66012 sc-eQTL 7.62e-01 -0.0233 0.077 0.701 ncMono L2
ENSG00000162517 PEF1 -802150 sc-eQTL 7.19e-01 0.0318 0.0883 0.701 ncMono L2
ENSG00000168528 SERINC2 -566819 sc-eQTL 4.50e-01 0.0635 0.0839 0.701 ncMono L2
ENSG00000284543 LINC01226 -663480 sc-eQTL 6.94e-01 0.0331 0.0839 0.701 ncMono L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 1.12e-02 -0.219 0.0856 0.701 ncMono L2
ENSG00000060688 SNRNP40 -454042 sc-eQTL 2.88e-02 0.216 0.098 0.706 pDC L2
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 5.90e-01 0.059 0.109 0.706 pDC L2
ENSG00000134644 PUM1 -223245 sc-eQTL 6.24e-01 -0.0444 0.0905 0.706 pDC L2
ENSG00000162511 LAPTM5 84972 sc-eQTL 9.59e-01 -0.00436 0.0842 0.706 pDC L2
ENSG00000162517 PEF1 -802150 sc-eQTL 5.78e-01 0.0609 0.109 0.706 pDC L2
ENSG00000168528 SERINC2 -566819 sc-eQTL 9.73e-01 -0.00344 0.102 0.706 pDC L2
ENSG00000284543 LINC01226 -663480 sc-eQTL 6.44e-01 -0.0366 0.0792 0.706 pDC L2
ENSG00000287510 AL137857.1 111053 sc-eQTL 1.55e-01 0.132 0.0926 0.706 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -454042 sc-eQTL 1.61e-01 0.141 0.1 0.705 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 8.47e-01 -0.0162 0.0839 0.705 B_Memory LOneK1K
ENSG00000134644 PUM1 -223245 sc-eQTL 4.58e-01 -0.0552 0.0743 0.705 B_Memory LOneK1K
ENSG00000162510 MATN1 119161 sc-eQTL 6.24e-01 -0.0416 0.0848 0.705 B_Memory LOneK1K
ENSG00000162511 LAPTM5 84972 sc-eQTL 1.11e-01 -0.0847 0.053 0.705 B_Memory LOneK1K
ENSG00000162517 PEF1 -802150 sc-eQTL 5.62e-04 -0.301 0.0858 0.705 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 5.70e-01 0.0401 0.0704 0.705 B_Memory LOneK1K
ENSG00000287510 AL137857.1 111053 sc-eQTL 5.31e-02 -0.148 0.0761 0.705 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -454042 sc-eQTL 8.52e-01 0.0168 0.0902 0.705 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 8.90e-01 0.00991 0.0713 0.705 B_Naive LOneK1K
ENSG00000134644 PUM1 -223245 sc-eQTL 5.51e-01 -0.0403 0.0674 0.705 B_Naive LOneK1K
ENSG00000162510 MATN1 119161 sc-eQTL 6.66e-01 0.0281 0.0649 0.705 B_Naive LOneK1K
ENSG00000162511 LAPTM5 84972 sc-eQTL 1.52e-01 -0.0654 0.0455 0.705 B_Naive LOneK1K
ENSG00000162517 PEF1 -802150 sc-eQTL 7.40e-01 0.0277 0.0835 0.705 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 3.15e-01 -0.0593 0.0589 0.705 B_Naive LOneK1K
ENSG00000287510 AL137857.1 111053 sc-eQTL 7.18e-01 -0.0253 0.0701 0.705 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -454042 sc-eQTL 7.67e-01 0.0223 0.0752 0.705 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 2.73e-01 -0.0933 0.085 0.705 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -223245 sc-eQTL 1.84e-02 -0.127 0.0536 0.705 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 84972 sc-eQTL 1.36e-01 -0.071 0.0475 0.705 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -66012 sc-eQTL 2.73e-01 -0.107 0.0972 0.705 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -802150 sc-eQTL 1.42e-02 -0.167 0.0676 0.705 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -566819 sc-eQTL 3.37e-01 0.0963 0.1 0.705 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -663480 sc-eQTL 5.52e-01 0.0489 0.0821 0.705 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 111053 sc-eQTL 1.40e-02 -0.188 0.0759 0.705 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -454042 sc-eQTL 7.26e-01 0.0289 0.0824 0.703 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 4.00e-01 0.076 0.09 0.703 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -223245 sc-eQTL 5.93e-01 -0.0396 0.0738 0.703 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 84972 sc-eQTL 8.18e-01 0.0136 0.0591 0.703 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -66012 sc-eQTL 5.94e-01 0.0461 0.0863 0.703 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -802150 sc-eQTL 8.28e-01 -0.017 0.0784 0.703 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -566819 sc-eQTL 4.28e-01 0.0709 0.0894 0.703 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -663480 sc-eQTL 8.65e-01 0.0145 0.085 0.703 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 111053 sc-eQTL 2.57e-01 -0.0964 0.0848 0.703 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -454042 sc-eQTL 1.15e-01 -0.147 0.0926 0.703 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -922147 sc-eQTL 2.51e-01 0.091 0.0791 0.703 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -454236 sc-eQTL 7.53e-01 -0.0201 0.0636 0.703 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -223245 sc-eQTL 1.55e-01 -0.099 0.0694 0.703 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 84972 sc-eQTL 3.09e-02 0.167 0.077 0.703 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -802150 sc-eQTL 3.41e-01 -0.0564 0.0591 0.703 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 124242 sc-eQTL 3.83e-01 0.0784 0.0897 0.703 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 111053 sc-eQTL 3.61e-01 0.0709 0.0774 0.703 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000162512 SDC3 -66012 eQTL 0.0289 -0.0546 0.025 0.0 0.0 0.325

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121753 \N -922147 2.67e-07 1.33e-07 4.98e-08 2.24e-07 9.24e-08 9.91e-08 1.67e-07 5.4e-08 1.47e-07 4.94e-08 1.52e-07 8.68e-08 1.87e-07 7.13e-08 6.12e-08 7.3e-08 4.17e-08 1.27e-07 6.07e-08 5.04e-08 1.19e-07 1.27e-07 1.45e-07 3.03e-08 1.55e-07 1.14e-07 1.07e-07 9.74e-08 1.16e-07 1.02e-07 1.08e-07 3.72e-08 3.56e-08 8.89e-08 3.46e-08 3.2e-08 4.06e-08 8.72e-08 6.28e-08 7.65e-08 5.65e-08 1.48e-07 5.22e-08 1.07e-08 4.25e-08 1.83e-08 1.19e-07 3.86e-09 4.73e-08