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Genes within 1Mb (chr1:30842471:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -454317 sc-eQTL 2.86e-01 0.0857 0.0801 0.342 B L1
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 1.03e-01 0.105 0.0639 0.342 B L1
ENSG00000134644 PUM1 -223520 sc-eQTL 2.03e-01 -0.0686 0.0538 0.342 B L1
ENSG00000162510 MATN1 118886 sc-eQTL 8.81e-01 0.00848 0.0568 0.342 B L1
ENSG00000162511 LAPTM5 84697 sc-eQTL 2.23e-02 -0.101 0.0439 0.342 B L1
ENSG00000162517 PEF1 -802425 sc-eQTL 3.05e-02 -0.145 0.0663 0.342 B L1
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 5.95e-02 -0.0979 0.0516 0.342 B L1
ENSG00000287510 AL137857.1 110778 sc-eQTL 9.54e-02 -0.103 0.0612 0.342 B L1
ENSG00000060688 SNRNP40 -454317 sc-eQTL 5.28e-01 -0.0433 0.0685 0.342 CD4T L1
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 2.60e-02 0.119 0.053 0.342 CD4T L1
ENSG00000134644 PUM1 -223520 sc-eQTL 9.20e-01 0.00478 0.0477 0.342 CD4T L1
ENSG00000162511 LAPTM5 84697 sc-eQTL 2.79e-01 -0.0573 0.0527 0.342 CD4T L1
ENSG00000162517 PEF1 -802425 sc-eQTL 5.44e-01 -0.0336 0.0553 0.342 CD4T L1
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 5.60e-01 -0.0276 0.0473 0.342 CD4T L1
ENSG00000287510 AL137857.1 110778 sc-eQTL 4.97e-01 -0.0385 0.0566 0.342 CD4T L1
ENSG00000060688 SNRNP40 -454317 sc-eQTL 8.90e-01 0.0125 0.0907 0.342 CD8T L1
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 7.06e-01 0.0228 0.0603 0.342 CD8T L1
ENSG00000134644 PUM1 -223520 sc-eQTL 8.91e-01 0.00732 0.0531 0.342 CD8T L1
ENSG00000162511 LAPTM5 84697 sc-eQTL 5.99e-01 0.0271 0.0516 0.342 CD8T L1
ENSG00000162517 PEF1 -802425 sc-eQTL 8.63e-01 -0.011 0.0636 0.342 CD8T L1
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 3.53e-01 -0.0562 0.0604 0.342 CD8T L1
ENSG00000287510 AL137857.1 110778 sc-eQTL 5.57e-01 -0.0447 0.0759 0.342 CD8T L1
ENSG00000060688 SNRNP40 -454317 sc-eQTL 7.27e-01 0.0284 0.0813 0.336 DC L1
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 2.64e-03 0.287 0.0941 0.336 DC L1
ENSG00000134644 PUM1 -223520 sc-eQTL 6.95e-01 0.0296 0.0754 0.336 DC L1
ENSG00000162511 LAPTM5 84697 sc-eQTL 7.02e-01 0.0207 0.0538 0.336 DC L1
ENSG00000162517 PEF1 -802425 sc-eQTL 8.75e-01 -0.0138 0.0873 0.336 DC L1
ENSG00000168528 SERINC2 -567094 sc-eQTL 3.80e-01 -0.078 0.0886 0.336 DC L1
ENSG00000284543 LINC01226 -663755 sc-eQTL 7.59e-01 -0.018 0.0588 0.336 DC L1
ENSG00000287510 AL137857.1 110778 sc-eQTL 4.88e-03 -0.238 0.0835 0.336 DC L1
ENSG00000060688 SNRNP40 -454317 sc-eQTL 7.54e-01 0.0195 0.0622 0.342 Mono L1
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 5.54e-02 0.147 0.0764 0.342 Mono L1
ENSG00000134644 PUM1 -223520 sc-eQTL 2.33e-02 -0.112 0.0488 0.342 Mono L1
ENSG00000162511 LAPTM5 84697 sc-eQTL 1.96e-01 -0.0587 0.0453 0.342 Mono L1
ENSG00000162512 SDC3 -66287 sc-eQTL 9.83e-01 0.00186 0.0874 0.342 Mono L1
ENSG00000162517 PEF1 -802425 sc-eQTL 3.29e-01 0.0598 0.0611 0.342 Mono L1
ENSG00000168528 SERINC2 -567094 sc-eQTL 9.91e-01 -0.00103 0.0937 0.342 Mono L1
ENSG00000284543 LINC01226 -663755 sc-eQTL 9.93e-01 0.000755 0.0826 0.342 Mono L1
ENSG00000287510 AL137857.1 110778 sc-eQTL 4.66e-03 -0.203 0.0708 0.342 Mono L1
ENSG00000060688 SNRNP40 -454317 sc-eQTL 3.82e-01 -0.0767 0.0875 0.341 NK L1
ENSG00000121753 ADGRB2 -922422 sc-eQTL 9.54e-01 -0.00439 0.0755 0.341 NK L1
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 3.31e-01 0.0583 0.0599 0.341 NK L1
ENSG00000134644 PUM1 -223520 sc-eQTL 4.29e-01 -0.0498 0.0629 0.341 NK L1
ENSG00000162511 LAPTM5 84697 sc-eQTL 6.38e-01 0.0341 0.0724 0.341 NK L1
ENSG00000162517 PEF1 -802425 sc-eQTL 5.47e-01 -0.0319 0.0528 0.341 NK L1
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 6.91e-01 -0.0324 0.0814 0.341 NK L1
ENSG00000287510 AL137857.1 110778 sc-eQTL 2.99e-01 -0.0781 0.075 0.341 NK L1
ENSG00000060688 SNRNP40 -454317 sc-eQTL 8.76e-01 0.0103 0.0657 0.342 Other_T L1
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 7.42e-01 0.0231 0.0702 0.342 Other_T L1
ENSG00000134644 PUM1 -223520 sc-eQTL 9.06e-01 0.0075 0.0631 0.342 Other_T L1
ENSG00000162511 LAPTM5 84697 sc-eQTL 5.82e-01 -0.0285 0.0517 0.342 Other_T L1
ENSG00000162517 PEF1 -802425 sc-eQTL 6.28e-01 0.0335 0.069 0.342 Other_T L1
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 6.67e-01 -0.0365 0.0847 0.342 Other_T L1
ENSG00000287510 AL137857.1 110778 sc-eQTL 7.52e-01 0.0279 0.0882 0.342 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -454317 sc-eQTL 1.96e-01 0.141 0.109 0.327 B_Activated L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 3.93e-01 0.0945 0.11 0.327 B_Activated L2
ENSG00000134644 PUM1 -223520 sc-eQTL 4.45e-02 -0.205 0.101 0.327 B_Activated L2
ENSG00000162510 MATN1 118886 sc-eQTL 9.51e-01 0.0055 0.0897 0.327 B_Activated L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 1.22e-02 -0.156 0.0614 0.327 B_Activated L2
ENSG00000162517 PEF1 -802425 sc-eQTL 9.31e-01 0.00919 0.106 0.327 B_Activated L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 5.53e-01 0.0599 0.101 0.327 B_Activated L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 1.76e-01 -0.121 0.0889 0.327 B_Activated L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 4.46e-01 0.0759 0.0993 0.343 B_Intermediate L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 5.75e-01 0.0465 0.0828 0.343 B_Intermediate L2
ENSG00000134644 PUM1 -223520 sc-eQTL 8.58e-01 -0.014 0.0782 0.343 B_Intermediate L2
ENSG00000162510 MATN1 118886 sc-eQTL 6.96e-02 0.147 0.0808 0.343 B_Intermediate L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 1.97e-01 -0.0644 0.0498 0.343 B_Intermediate L2
ENSG00000162517 PEF1 -802425 sc-eQTL 3.88e-02 -0.191 0.0918 0.343 B_Intermediate L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 6.31e-01 0.0337 0.0701 0.343 B_Intermediate L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 4.09e-02 -0.16 0.0777 0.343 B_Intermediate L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 9.11e-01 0.0106 0.095 0.341 B_Memory L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 9.93e-01 0.000715 0.0875 0.341 B_Memory L2
ENSG00000134644 PUM1 -223520 sc-eQTL 1.95e-01 0.0985 0.0758 0.341 B_Memory L2
ENSG00000162510 MATN1 118886 sc-eQTL 4.21e-01 -0.0586 0.0727 0.341 B_Memory L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 3.42e-02 -0.136 0.0639 0.341 B_Memory L2
ENSG00000162517 PEF1 -802425 sc-eQTL 1.78e-01 -0.116 0.0859 0.341 B_Memory L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 8.78e-02 -0.126 0.0734 0.341 B_Memory L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 1.74e-01 -0.117 0.0862 0.341 B_Memory L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 2.08e-01 0.11 0.0872 0.342 B_Naive1 L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 6.43e-01 0.0351 0.0756 0.342 B_Naive1 L2
ENSG00000134644 PUM1 -223520 sc-eQTL 6.45e-01 -0.0308 0.0666 0.342 B_Naive1 L2
ENSG00000162510 MATN1 118886 sc-eQTL 8.27e-01 -0.0148 0.0677 0.342 B_Naive1 L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 3.73e-02 -0.0937 0.0447 0.342 B_Naive1 L2
ENSG00000162517 PEF1 -802425 sc-eQTL 9.62e-01 0.00382 0.0797 0.342 B_Naive1 L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 1.93e-01 -0.0772 0.0591 0.342 B_Naive1 L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 1.42e-01 -0.108 0.0729 0.342 B_Naive1 L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 9.37e-01 0.00734 0.0929 0.341 B_Naive2 L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 2.31e-01 0.0918 0.0765 0.341 B_Naive2 L2
ENSG00000134644 PUM1 -223520 sc-eQTL 7.88e-01 -0.0202 0.0751 0.341 B_Naive2 L2
ENSG00000162510 MATN1 118886 sc-eQTL 5.52e-01 0.0429 0.072 0.341 B_Naive2 L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 1.09e-01 -0.0782 0.0487 0.341 B_Naive2 L2
ENSG00000162517 PEF1 -802425 sc-eQTL 6.53e-01 -0.04 0.089 0.341 B_Naive2 L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 1.66e-01 -0.0985 0.071 0.341 B_Naive2 L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 3.51e-01 -0.0718 0.0768 0.341 B_Naive2 L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 4.81e-01 0.0647 0.0916 0.339 CD4_CTL L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 7.02e-01 -0.0345 0.0902 0.339 CD4_CTL L2
ENSG00000134644 PUM1 -223520 sc-eQTL 5.05e-01 0.059 0.0884 0.339 CD4_CTL L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 2.93e-01 -0.0828 0.0786 0.339 CD4_CTL L2
ENSG00000162517 PEF1 -802425 sc-eQTL 4.26e-01 0.0644 0.0807 0.339 CD4_CTL L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 8.78e-01 -0.0133 0.0862 0.339 CD4_CTL L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 2.38e-01 0.0898 0.0758 0.339 CD4_CTL L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 2.36e-01 -0.085 0.0715 0.342 CD4_Naive L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 2.29e-03 0.192 0.0622 0.342 CD4_Naive L2
ENSG00000134644 PUM1 -223520 sc-eQTL 8.74e-01 -0.00808 0.0508 0.342 CD4_Naive L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 2.66e-01 -0.0604 0.0542 0.342 CD4_Naive L2
ENSG00000162517 PEF1 -802425 sc-eQTL 4.47e-01 -0.0454 0.0596 0.342 CD4_Naive L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 9.76e-01 -0.00166 0.0552 0.342 CD4_Naive L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 4.67e-02 -0.126 0.0628 0.342 CD4_Naive L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 1.33e-01 0.136 0.0902 0.342 CD4_TCM L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 1.06e-01 -0.118 0.0726 0.342 CD4_TCM L2
ENSG00000134644 PUM1 -223520 sc-eQTL 7.65e-01 -0.0194 0.0647 0.342 CD4_TCM L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 5.47e-01 -0.0324 0.0536 0.342 CD4_TCM L2
ENSG00000162517 PEF1 -802425 sc-eQTL 8.51e-01 0.0135 0.0719 0.342 CD4_TCM L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 2.88e-01 -0.0723 0.0679 0.342 CD4_TCM L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 6.20e-01 -0.0376 0.0758 0.342 CD4_TCM L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 7.51e-01 -0.0287 0.0902 0.342 CD4_TEM L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 3.58e-01 0.0791 0.0858 0.342 CD4_TEM L2
ENSG00000134644 PUM1 -223520 sc-eQTL 3.49e-01 0.0671 0.0715 0.342 CD4_TEM L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 5.29e-01 -0.0457 0.0724 0.342 CD4_TEM L2
ENSG00000162517 PEF1 -802425 sc-eQTL 7.51e-01 -0.0258 0.0811 0.342 CD4_TEM L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 4.15e-01 0.0691 0.0846 0.342 CD4_TEM L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 9.64e-01 -0.00381 0.0835 0.342 CD4_TEM L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 7.12e-01 0.0362 0.0979 0.342 CD8_CTL L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 3.14e-01 0.0756 0.0749 0.342 CD8_CTL L2
ENSG00000134644 PUM1 -223520 sc-eQTL 7.65e-01 -0.0218 0.0729 0.342 CD8_CTL L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 1.65e-01 0.112 0.0804 0.342 CD8_CTL L2
ENSG00000162517 PEF1 -802425 sc-eQTL 1.33e-01 0.105 0.07 0.342 CD8_CTL L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 8.45e-01 -0.0166 0.0849 0.342 CD8_CTL L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 4.01e-01 0.0671 0.0797 0.342 CD8_CTL L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 6.71e-01 -0.0384 0.0902 0.342 CD8_Naive L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 7.83e-01 0.0214 0.0778 0.342 CD8_Naive L2
ENSG00000134644 PUM1 -223520 sc-eQTL 4.78e-01 -0.0444 0.0626 0.342 CD8_Naive L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 1.44e-01 -0.0876 0.0597 0.342 CD8_Naive L2
ENSG00000162517 PEF1 -802425 sc-eQTL 8.32e-01 -0.0177 0.0834 0.342 CD8_Naive L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 4.04e-01 -0.0626 0.0748 0.342 CD8_Naive L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 7.65e-01 -0.0244 0.0815 0.342 CD8_Naive L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 7.26e-01 -0.0356 0.101 0.347 CD8_TCM L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 5.47e-01 -0.0559 0.0928 0.347 CD8_TCM L2
ENSG00000134644 PUM1 -223520 sc-eQTL 2.06e-01 -0.11 0.0869 0.347 CD8_TCM L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 6.71e-01 0.0389 0.0913 0.347 CD8_TCM L2
ENSG00000162517 PEF1 -802425 sc-eQTL 2.99e-01 -0.097 0.0931 0.347 CD8_TCM L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 6.06e-01 -0.0437 0.0845 0.347 CD8_TCM L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 3.33e-02 -0.181 0.0845 0.347 CD8_TCM L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 2.86e-01 0.102 0.0957 0.338 CD8_TEM L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 1.70e-01 0.126 0.0916 0.338 CD8_TEM L2
ENSG00000134644 PUM1 -223520 sc-eQTL 5.69e-02 -0.179 0.0932 0.338 CD8_TEM L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 6.05e-01 0.0458 0.0884 0.338 CD8_TEM L2
ENSG00000162517 PEF1 -802425 sc-eQTL 5.22e-01 -0.0534 0.0832 0.338 CD8_TEM L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 4.30e-02 0.185 0.0908 0.338 CD8_TEM L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 8.29e-02 -0.144 0.0824 0.338 CD8_TEM L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 8.47e-01 -0.0186 0.0962 0.34 MAIT L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 3.03e-02 0.184 0.0842 0.34 MAIT L2
ENSG00000134644 PUM1 -223520 sc-eQTL 5.94e-01 0.0436 0.0816 0.34 MAIT L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 4.46e-01 0.0587 0.0769 0.34 MAIT L2
ENSG00000162517 PEF1 -802425 sc-eQTL 7.09e-02 0.153 0.084 0.34 MAIT L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 9.31e-01 -0.00748 0.0858 0.34 MAIT L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 9.96e-01 0.000459 0.0884 0.34 MAIT L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 6.13e-01 -0.0501 0.0989 0.336 NK_CD56bright L2
ENSG00000121753 ADGRB2 -922422 sc-eQTL 6.06e-01 -0.04 0.0775 0.336 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 6.21e-01 0.0414 0.0836 0.336 NK_CD56bright L2
ENSG00000134644 PUM1 -223520 sc-eQTL 3.64e-01 0.0798 0.0877 0.336 NK_CD56bright L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 8.54e-01 -0.016 0.0866 0.336 NK_CD56bright L2
ENSG00000162517 PEF1 -802425 sc-eQTL 9.92e-02 -0.138 0.0836 0.336 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 6.52e-01 0.0393 0.087 0.336 NK_CD56bright L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 8.43e-02 -0.148 0.0852 0.336 NK_CD56bright L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 5.36e-01 -0.0574 0.0928 0.341 NK_CD56dim L2
ENSG00000121753 ADGRB2 -922422 sc-eQTL 8.17e-01 0.019 0.0817 0.341 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 1.23e-01 0.106 0.0683 0.341 NK_CD56dim L2
ENSG00000134644 PUM1 -223520 sc-eQTL 5.31e-01 -0.0442 0.0704 0.341 NK_CD56dim L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 7.39e-01 0.0251 0.0751 0.341 NK_CD56dim L2
ENSG00000162517 PEF1 -802425 sc-eQTL 1.96e-01 -0.0863 0.0666 0.341 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 6.64e-01 -0.0409 0.0941 0.341 NK_CD56dim L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 3.34e-01 -0.075 0.0775 0.341 NK_CD56dim L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 4.72e-01 -0.0712 0.0988 0.336 NK_HLA L2
ENSG00000121753 ADGRB2 -922422 sc-eQTL 4.13e-01 0.0644 0.0784 0.336 NK_HLA L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 7.47e-01 -0.0286 0.0883 0.336 NK_HLA L2
ENSG00000134644 PUM1 -223520 sc-eQTL 2.54e-01 -0.0982 0.0858 0.336 NK_HLA L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 9.97e-01 -0.000273 0.0822 0.336 NK_HLA L2
ENSG00000162517 PEF1 -802425 sc-eQTL 8.36e-01 -0.0191 0.0926 0.336 NK_HLA L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 1.69e-01 0.12 0.087 0.336 NK_HLA L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 4.68e-01 -0.0614 0.0844 0.336 NK_HLA L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 6.45e-01 0.0415 0.09 0.341 NK_cytokine L2
ENSG00000121753 ADGRB2 -922422 sc-eQTL 9.11e-01 0.00914 0.0814 0.341 NK_cytokine L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 4.92e-01 -0.0483 0.0702 0.341 NK_cytokine L2
ENSG00000134644 PUM1 -223520 sc-eQTL 5.02e-01 0.051 0.0759 0.341 NK_cytokine L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 9.34e-01 -0.00698 0.0837 0.341 NK_cytokine L2
ENSG00000162517 PEF1 -802425 sc-eQTL 8.15e-01 -0.0167 0.0713 0.341 NK_cytokine L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 1.38e-01 -0.131 0.0882 0.341 NK_cytokine L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 9.07e-01 0.00962 0.0825 0.341 NK_cytokine L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 2.97e-01 0.11 0.105 0.326 PB L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 8.27e-01 0.0267 0.122 0.326 PB L2
ENSG00000134644 PUM1 -223520 sc-eQTL 8.86e-01 0.0153 0.106 0.326 PB L2
ENSG00000162510 MATN1 118886 sc-eQTL 4.14e-01 0.081 0.0987 0.326 PB L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 2.96e-01 -0.0739 0.0704 0.326 PB L2
ENSG00000162517 PEF1 -802425 sc-eQTL 4.04e-01 0.0909 0.109 0.326 PB L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 5.31e-02 0.186 0.0952 0.326 PB L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 3.41e-01 -0.0981 0.103 0.326 PB L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 2.09e-01 0.0897 0.0712 0.341 Pro_T L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 3.38e-02 -0.192 0.0897 0.341 Pro_T L2
ENSG00000134644 PUM1 -223520 sc-eQTL 6.22e-01 0.0417 0.0845 0.341 Pro_T L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 9.64e-01 -0.00277 0.0607 0.341 Pro_T L2
ENSG00000162517 PEF1 -802425 sc-eQTL 1.62e-01 0.124 0.0886 0.341 Pro_T L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 6.13e-01 -0.043 0.0848 0.341 Pro_T L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 4.37e-01 -0.0607 0.0779 0.341 Pro_T L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 4.67e-01 -0.0669 0.0917 0.342 Treg L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 7.71e-01 -0.0259 0.0888 0.342 Treg L2
ENSG00000134644 PUM1 -223520 sc-eQTL 7.35e-01 -0.024 0.071 0.342 Treg L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 1.19e-01 -0.126 0.0809 0.342 Treg L2
ENSG00000162517 PEF1 -802425 sc-eQTL 3.51e-01 -0.082 0.0877 0.342 Treg L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 6.03e-01 0.0431 0.0829 0.342 Treg L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 1.87e-01 -0.109 0.0825 0.342 Treg L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 7.50e-01 0.0306 0.0958 0.337 cDC L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 5.61e-02 0.197 0.103 0.337 cDC L2
ENSG00000134644 PUM1 -223520 sc-eQTL 8.83e-01 0.0132 0.0891 0.337 cDC L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 3.63e-01 -0.0568 0.0623 0.337 cDC L2
ENSG00000162517 PEF1 -802425 sc-eQTL 9.63e-01 -0.00421 0.0904 0.337 cDC L2
ENSG00000168528 SERINC2 -567094 sc-eQTL 1.73e-01 -0.109 0.0798 0.337 cDC L2
ENSG00000284543 LINC01226 -663755 sc-eQTL 5.74e-01 0.0444 0.0787 0.337 cDC L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 1.40e-02 -0.207 0.0834 0.337 cDC L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 9.13e-01 0.00821 0.0751 0.342 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 3.79e-01 0.0737 0.0836 0.342 cMono_IL1B L2
ENSG00000134644 PUM1 -223520 sc-eQTL 5.54e-02 -0.108 0.0562 0.342 cMono_IL1B L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 3.19e-01 -0.0496 0.0496 0.342 cMono_IL1B L2
ENSG00000162512 SDC3 -66287 sc-eQTL 9.99e-01 6.69e-05 0.0937 0.342 cMono_IL1B L2
ENSG00000162517 PEF1 -802425 sc-eQTL 8.81e-01 -0.0115 0.0766 0.342 cMono_IL1B L2
ENSG00000168528 SERINC2 -567094 sc-eQTL 8.73e-01 -0.0152 0.0949 0.342 cMono_IL1B L2
ENSG00000284543 LINC01226 -663755 sc-eQTL 8.31e-01 -0.018 0.0839 0.342 cMono_IL1B L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 2.43e-01 -0.0912 0.078 0.342 cMono_IL1B L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 7.80e-01 0.0221 0.0788 0.342 cMono_S100A L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 4.19e-01 0.0753 0.093 0.342 cMono_S100A L2
ENSG00000134644 PUM1 -223520 sc-eQTL 8.20e-02 -0.117 0.0668 0.342 cMono_S100A L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 1.30e-01 -0.0782 0.0515 0.342 cMono_S100A L2
ENSG00000162512 SDC3 -66287 sc-eQTL 4.84e-01 -0.0625 0.0893 0.342 cMono_S100A L2
ENSG00000162517 PEF1 -802425 sc-eQTL 2.48e-01 0.0932 0.0804 0.342 cMono_S100A L2
ENSG00000168528 SERINC2 -567094 sc-eQTL 6.55e-01 -0.0424 0.0946 0.342 cMono_S100A L2
ENSG00000284543 LINC01226 -663755 sc-eQTL 4.78e-01 0.0546 0.0768 0.342 cMono_S100A L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 4.30e-02 -0.156 0.0764 0.342 cMono_S100A L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 5.95e-01 0.0607 0.114 0.358 gdT L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 4.42e-01 -0.0754 0.0978 0.358 gdT L2
ENSG00000134644 PUM1 -223520 sc-eQTL 7.81e-01 0.0281 0.101 0.358 gdT L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 2.93e-02 -0.238 0.108 0.358 gdT L2
ENSG00000162517 PEF1 -802425 sc-eQTL 7.01e-01 -0.0386 0.1 0.358 gdT L2
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 3.35e-01 0.0977 0.101 0.358 gdT L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 3.80e-01 0.0863 0.0979 0.358 gdT L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 6.12e-01 0.0448 0.0881 0.342 intMono L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 7.41e-02 0.169 0.094 0.342 intMono L2
ENSG00000134644 PUM1 -223520 sc-eQTL 5.64e-01 -0.0464 0.0803 0.342 intMono L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 8.57e-01 -0.0114 0.0631 0.342 intMono L2
ENSG00000162512 SDC3 -66287 sc-eQTL 3.05e-01 0.0885 0.0861 0.342 intMono L2
ENSG00000162517 PEF1 -802425 sc-eQTL 3.92e-01 0.0777 0.0906 0.342 intMono L2
ENSG00000168528 SERINC2 -567094 sc-eQTL 5.80e-01 -0.05 0.0903 0.342 intMono L2
ENSG00000284543 LINC01226 -663755 sc-eQTL 5.10e-01 0.0565 0.0856 0.342 intMono L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 5.73e-01 -0.0483 0.0856 0.342 intMono L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 6.40e-01 0.0398 0.085 0.333 ncMono L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 9.66e-01 -0.00392 0.0906 0.333 ncMono L2
ENSG00000134644 PUM1 -223520 sc-eQTL 5.66e-01 -0.0425 0.074 0.333 ncMono L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 3.98e-01 -0.0569 0.0671 0.333 ncMono L2
ENSG00000162512 SDC3 -66287 sc-eQTL 7.65e-01 -0.0225 0.0754 0.333 ncMono L2
ENSG00000162517 PEF1 -802425 sc-eQTL 7.78e-01 0.0245 0.0865 0.333 ncMono L2
ENSG00000168528 SERINC2 -567094 sc-eQTL 9.53e-01 0.00489 0.0823 0.333 ncMono L2
ENSG00000284543 LINC01226 -663755 sc-eQTL 3.15e-01 -0.0826 0.082 0.333 ncMono L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 2.08e-03 -0.26 0.0832 0.333 ncMono L2
ENSG00000060688 SNRNP40 -454317 sc-eQTL 3.19e-01 0.0969 0.0969 0.328 pDC L2
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 7.58e-03 0.282 0.104 0.328 pDC L2
ENSG00000134644 PUM1 -223520 sc-eQTL 7.11e-01 -0.0328 0.0885 0.328 pDC L2
ENSG00000162511 LAPTM5 84697 sc-eQTL 2.31e-01 0.0984 0.0819 0.328 pDC L2
ENSG00000162517 PEF1 -802425 sc-eQTL 9.89e-01 0.00151 0.107 0.328 pDC L2
ENSG00000168528 SERINC2 -567094 sc-eQTL 6.75e-01 -0.0419 0.0997 0.328 pDC L2
ENSG00000284543 LINC01226 -663755 sc-eQTL 9.64e-01 -0.00347 0.0775 0.328 pDC L2
ENSG00000287510 AL137857.1 110778 sc-eQTL 9.05e-01 0.0109 0.0911 0.328 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -454317 sc-eQTL 9.78e-01 -0.00263 0.0935 0.342 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 5.49e-01 0.0466 0.0778 0.342 B_Memory LOneK1K
ENSG00000134644 PUM1 -223520 sc-eQTL 5.53e-01 0.041 0.0689 0.342 B_Memory LOneK1K
ENSG00000162510 MATN1 118886 sc-eQTL 4.00e-01 0.0663 0.0785 0.342 B_Memory LOneK1K
ENSG00000162511 LAPTM5 84697 sc-eQTL 3.13e-02 -0.106 0.0489 0.342 B_Memory LOneK1K
ENSG00000162517 PEF1 -802425 sc-eQTL 2.97e-02 -0.177 0.081 0.342 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 9.14e-01 0.0071 0.0654 0.342 B_Memory LOneK1K
ENSG00000287510 AL137857.1 110778 sc-eQTL 7.23e-02 -0.128 0.0707 0.342 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -454317 sc-eQTL 6.28e-01 0.0413 0.0853 0.342 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 2.24e-01 0.082 0.0672 0.342 B_Naive LOneK1K
ENSG00000134644 PUM1 -223520 sc-eQTL 4.23e-01 -0.0512 0.0637 0.342 B_Naive LOneK1K
ENSG00000162510 MATN1 118886 sc-eQTL 7.78e-01 -0.0173 0.0614 0.342 B_Naive LOneK1K
ENSG00000162511 LAPTM5 84697 sc-eQTL 7.60e-02 -0.0766 0.0429 0.342 B_Naive LOneK1K
ENSG00000162517 PEF1 -802425 sc-eQTL 6.01e-01 -0.0414 0.079 0.342 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 3.71e-02 -0.116 0.0553 0.342 B_Naive LOneK1K
ENSG00000287510 AL137857.1 110778 sc-eQTL 1.99e-01 -0.0853 0.0661 0.342 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -454317 sc-eQTL 5.58e-01 0.0416 0.0708 0.342 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 1.80e-01 0.108 0.0799 0.342 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -223520 sc-eQTL 1.31e-02 -0.126 0.0505 0.342 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 84697 sc-eQTL 2.55e-01 -0.0512 0.0449 0.342 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -66287 sc-eQTL 5.24e-01 -0.0585 0.0917 0.342 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -802425 sc-eQTL 6.72e-01 0.0273 0.0645 0.342 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -567094 sc-eQTL 8.76e-01 -0.0147 0.0944 0.342 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -663755 sc-eQTL 8.65e-01 0.0132 0.0774 0.342 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 110778 sc-eQTL 3.77e-02 -0.15 0.0718 0.342 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -454317 sc-eQTL 9.88e-01 0.00118 0.0787 0.341 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 4.40e-02 0.173 0.0853 0.341 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -223520 sc-eQTL 2.01e-01 -0.0901 0.0703 0.341 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 84697 sc-eQTL 5.99e-01 -0.0297 0.0564 0.341 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -66287 sc-eQTL 3.00e-01 0.0855 0.0823 0.341 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -802425 sc-eQTL 8.06e-01 0.0184 0.0749 0.341 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -567094 sc-eQTL 8.26e-01 -0.0188 0.0855 0.341 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -663755 sc-eQTL 4.71e-01 0.0586 0.0811 0.341 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 110778 sc-eQTL 2.35e-02 -0.183 0.0803 0.341 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -454317 sc-eQTL 5.12e-01 -0.058 0.0884 0.341 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -922422 sc-eQTL 8.24e-01 0.0167 0.0754 0.341 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -454511 sc-eQTL 2.97e-01 0.063 0.0603 0.341 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -223520 sc-eQTL 4.40e-01 -0.0512 0.0661 0.341 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 84697 sc-eQTL 7.27e-01 0.0259 0.074 0.341 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -802425 sc-eQTL 4.60e-01 -0.0415 0.0562 0.341 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 123967 sc-eQTL 5.54e-01 -0.0506 0.0853 0.341 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 110778 sc-eQTL 4.30e-01 -0.0581 0.0736 0.341 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -454511 eQTL 2.31e-02 -0.0425 0.0187 0.0 0.0 0.319
ENSG00000162511 LAPTM5 84697 eQTL 0.0301 0.0229 0.0105 0.0 0.0 0.319

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -454511 8.21e-07 4.93e-07 8.99e-08 3.62e-07 1.13e-07 1.57e-07 5.13e-07 9.07e-08 3.32e-07 2.01e-07 4.97e-07 3.08e-07 6.47e-07 1.1e-07 1.5e-07 1.96e-07 1.69e-07 3.44e-07 1.55e-07 1.17e-07 1.76e-07 3.13e-07 3.11e-07 1.25e-07 6.87e-07 2.32e-07 1.97e-07 2.24e-07 3e-07 3.8e-07 2.6e-07 7.4e-08 5.58e-08 1.36e-07 2.7e-07 8.17e-08 1.01e-07 6.46e-08 4.9e-08 5.25e-08 1.01e-07 4.55e-07 3.19e-08 1.84e-08 1.01e-07 1.78e-08 1.05e-07 3.2e-09 5.69e-08