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Genes within 1Mb (chr1:30841702:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -455086 sc-eQTL 3.12e-01 0.0808 0.0798 0.34 B L1
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 1.33e-01 0.096 0.0637 0.34 B L1
ENSG00000134644 PUM1 -224289 sc-eQTL 1.83e-01 -0.0715 0.0535 0.34 B L1
ENSG00000162510 MATN1 118117 sc-eQTL 9.70e-01 0.00213 0.0565 0.34 B L1
ENSG00000162511 LAPTM5 83928 sc-eQTL 1.73e-02 -0.105 0.0436 0.34 B L1
ENSG00000162517 PEF1 -803194 sc-eQTL 2.84e-02 -0.146 0.066 0.34 B L1
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 5.68e-02 -0.0984 0.0514 0.34 B L1
ENSG00000287510 AL137857.1 110009 sc-eQTL 7.58e-02 -0.109 0.0609 0.34 B L1
ENSG00000060688 SNRNP40 -455086 sc-eQTL 5.35e-01 -0.0425 0.0683 0.34 CD4T L1
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 3.50e-02 0.112 0.0529 0.34 CD4T L1
ENSG00000134644 PUM1 -224289 sc-eQTL 8.92e-01 0.00644 0.0476 0.34 CD4T L1
ENSG00000162511 LAPTM5 83928 sc-eQTL 2.29e-01 -0.0633 0.0525 0.34 CD4T L1
ENSG00000162517 PEF1 -803194 sc-eQTL 5.26e-01 -0.0349 0.0551 0.34 CD4T L1
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 6.28e-01 -0.0229 0.0471 0.34 CD4T L1
ENSG00000287510 AL137857.1 110009 sc-eQTL 4.80e-01 -0.0399 0.0564 0.34 CD4T L1
ENSG00000060688 SNRNP40 -455086 sc-eQTL 8.38e-01 0.0185 0.0904 0.34 CD8T L1
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 6.80e-01 0.0248 0.0601 0.34 CD8T L1
ENSG00000134644 PUM1 -224289 sc-eQTL 7.82e-01 0.0147 0.053 0.34 CD8T L1
ENSG00000162511 LAPTM5 83928 sc-eQTL 6.13e-01 0.0261 0.0514 0.34 CD8T L1
ENSG00000162517 PEF1 -803194 sc-eQTL 9.23e-01 -0.00617 0.0634 0.34 CD8T L1
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 4.08e-01 -0.0499 0.0602 0.34 CD8T L1
ENSG00000287510 AL137857.1 110009 sc-eQTL 5.90e-01 -0.0409 0.0757 0.34 CD8T L1
ENSG00000060688 SNRNP40 -455086 sc-eQTL 6.96e-01 0.0317 0.0812 0.333 DC L1
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 5.13e-03 0.267 0.0944 0.333 DC L1
ENSG00000134644 PUM1 -224289 sc-eQTL 6.24e-01 0.037 0.0753 0.333 DC L1
ENSG00000162511 LAPTM5 83928 sc-eQTL 8.01e-01 0.0136 0.0538 0.333 DC L1
ENSG00000162517 PEF1 -803194 sc-eQTL 9.13e-01 -0.0095 0.0873 0.333 DC L1
ENSG00000168528 SERINC2 -567863 sc-eQTL 4.52e-01 -0.0667 0.0886 0.333 DC L1
ENSG00000284543 LINC01226 -664524 sc-eQTL 8.30e-01 -0.0126 0.0588 0.333 DC L1
ENSG00000287510 AL137857.1 110009 sc-eQTL 7.29e-03 -0.227 0.0836 0.333 DC L1
ENSG00000060688 SNRNP40 -455086 sc-eQTL 8.12e-01 0.0147 0.0619 0.34 Mono L1
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 4.56e-02 0.153 0.0761 0.34 Mono L1
ENSG00000134644 PUM1 -224289 sc-eQTL 1.99e-02 -0.114 0.0486 0.34 Mono L1
ENSG00000162511 LAPTM5 83928 sc-eQTL 1.62e-01 -0.0633 0.0451 0.34 Mono L1
ENSG00000162512 SDC3 -67056 sc-eQTL 8.98e-01 -0.0112 0.087 0.34 Mono L1
ENSG00000162517 PEF1 -803194 sc-eQTL 3.40e-01 0.0583 0.0609 0.34 Mono L1
ENSG00000168528 SERINC2 -567863 sc-eQTL 9.81e-01 0.00225 0.0934 0.34 Mono L1
ENSG00000284543 LINC01226 -664524 sc-eQTL 9.18e-01 0.00845 0.0823 0.34 Mono L1
ENSG00000287510 AL137857.1 110009 sc-eQTL 3.90e-03 -0.206 0.0705 0.34 Mono L1
ENSG00000060688 SNRNP40 -455086 sc-eQTL 3.46e-01 -0.0824 0.0872 0.339 NK L1
ENSG00000121753 ADGRB2 -923191 sc-eQTL 9.80e-01 0.00193 0.0753 0.339 NK L1
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 4.15e-01 0.0488 0.0597 0.339 NK L1
ENSG00000134644 PUM1 -224289 sc-eQTL 4.20e-01 -0.0507 0.0627 0.339 NK L1
ENSG00000162511 LAPTM5 83928 sc-eQTL 5.80e-01 0.04 0.0722 0.339 NK L1
ENSG00000162517 PEF1 -803194 sc-eQTL 5.13e-01 -0.0345 0.0527 0.339 NK L1
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 7.59e-01 -0.0249 0.0812 0.339 NK L1
ENSG00000287510 AL137857.1 110009 sc-eQTL 2.63e-01 -0.0839 0.0747 0.339 NK L1
ENSG00000060688 SNRNP40 -455086 sc-eQTL 9.21e-01 0.00654 0.0655 0.34 Other_T L1
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 8.18e-01 0.0161 0.07 0.34 Other_T L1
ENSG00000134644 PUM1 -224289 sc-eQTL 9.10e-01 0.00714 0.0629 0.34 Other_T L1
ENSG00000162511 LAPTM5 83928 sc-eQTL 5.71e-01 -0.0293 0.0515 0.34 Other_T L1
ENSG00000162517 PEF1 -803194 sc-eQTL 7.19e-01 0.0248 0.0688 0.34 Other_T L1
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 6.91e-01 -0.0337 0.0844 0.34 Other_T L1
ENSG00000287510 AL137857.1 110009 sc-eQTL 7.30e-01 0.0303 0.0879 0.34 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -455086 sc-eQTL 2.02e-01 0.139 0.109 0.324 B_Activated L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 4.54e-01 0.0825 0.11 0.324 B_Activated L2
ENSG00000134644 PUM1 -224289 sc-eQTL 5.57e-02 -0.195 0.101 0.324 B_Activated L2
ENSG00000162510 MATN1 118117 sc-eQTL 9.00e-01 -0.0113 0.0894 0.324 B_Activated L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 1.16e-02 -0.156 0.0612 0.324 B_Activated L2
ENSG00000162517 PEF1 -803194 sc-eQTL 9.25e-01 0.00998 0.106 0.324 B_Activated L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 6.11e-01 0.0513 0.101 0.324 B_Activated L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 1.60e-01 -0.125 0.0885 0.324 B_Activated L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 4.28e-01 0.0786 0.0989 0.341 B_Intermediate L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 5.81e-01 0.0457 0.0825 0.341 B_Intermediate L2
ENSG00000134644 PUM1 -224289 sc-eQTL 6.24e-01 -0.0382 0.0778 0.341 B_Intermediate L2
ENSG00000162510 MATN1 118117 sc-eQTL 9.17e-02 0.136 0.0805 0.341 B_Intermediate L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 2.06e-01 -0.0628 0.0496 0.341 B_Intermediate L2
ENSG00000162517 PEF1 -803194 sc-eQTL 3.43e-02 -0.195 0.0914 0.341 B_Intermediate L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 6.53e-01 0.0315 0.0698 0.341 B_Intermediate L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 3.34e-02 -0.166 0.0773 0.341 B_Intermediate L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 9.61e-01 0.00463 0.0948 0.338 B_Memory L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 9.60e-01 0.00435 0.0873 0.338 B_Memory L2
ENSG00000134644 PUM1 -224289 sc-eQTL 1.49e-01 0.11 0.0756 0.338 B_Memory L2
ENSG00000162510 MATN1 118117 sc-eQTL 3.44e-01 -0.0688 0.0725 0.338 B_Memory L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 3.28e-02 -0.137 0.0637 0.338 B_Memory L2
ENSG00000162517 PEF1 -803194 sc-eQTL 1.99e-01 -0.111 0.0857 0.338 B_Memory L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 9.62e-02 -0.122 0.0733 0.338 B_Memory L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 1.54e-01 -0.123 0.0859 0.338 B_Memory L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 2.50e-01 0.1 0.0871 0.34 B_Naive1 L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 7.58e-01 0.0233 0.0754 0.34 B_Naive1 L2
ENSG00000134644 PUM1 -224289 sc-eQTL 6.19e-01 -0.0331 0.0665 0.34 B_Naive1 L2
ENSG00000162510 MATN1 118117 sc-eQTL 7.65e-01 -0.0202 0.0675 0.34 B_Naive1 L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 3.30e-02 -0.0958 0.0446 0.34 B_Naive1 L2
ENSG00000162517 PEF1 -803194 sc-eQTL 9.83e-01 0.0017 0.0795 0.34 B_Naive1 L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 1.79e-01 -0.0796 0.059 0.34 B_Naive1 L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 1.34e-01 -0.11 0.0728 0.34 B_Naive1 L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 9.10e-01 0.0105 0.0929 0.339 B_Naive2 L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 2.84e-01 0.0822 0.0765 0.339 B_Naive2 L2
ENSG00000134644 PUM1 -224289 sc-eQTL 7.58e-01 -0.0232 0.075 0.339 B_Naive2 L2
ENSG00000162510 MATN1 118117 sc-eQTL 6.10e-01 0.0367 0.072 0.339 B_Naive2 L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 1.01e-01 -0.0801 0.0486 0.339 B_Naive2 L2
ENSG00000162517 PEF1 -803194 sc-eQTL 6.65e-01 -0.0386 0.089 0.339 B_Naive2 L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 1.67e-01 -0.0984 0.0709 0.339 B_Naive2 L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 3.32e-01 -0.0747 0.0768 0.339 B_Naive2 L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 3.58e-01 0.0843 0.0915 0.336 CD4_CTL L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 7.83e-01 -0.0249 0.0901 0.336 CD4_CTL L2
ENSG00000134644 PUM1 -224289 sc-eQTL 4.34e-01 0.0693 0.0883 0.336 CD4_CTL L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 3.31e-01 -0.0767 0.0786 0.336 CD4_CTL L2
ENSG00000162517 PEF1 -803194 sc-eQTL 3.59e-01 0.0741 0.0806 0.336 CD4_CTL L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 8.34e-01 -0.0181 0.0862 0.336 CD4_CTL L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 2.14e-01 0.0944 0.0758 0.336 CD4_CTL L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 2.46e-01 -0.0828 0.0712 0.34 CD4_Naive L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 3.15e-03 0.185 0.062 0.34 CD4_Naive L2
ENSG00000134644 PUM1 -224289 sc-eQTL 8.75e-01 -0.00797 0.0506 0.34 CD4_Naive L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 2.14e-01 -0.0673 0.054 0.34 CD4_Naive L2
ENSG00000162517 PEF1 -803194 sc-eQTL 4.06e-01 -0.0494 0.0593 0.34 CD4_Naive L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 9.65e-01 0.00243 0.055 0.34 CD4_Naive L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 5.47e-02 -0.121 0.0626 0.34 CD4_Naive L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 1.38e-01 0.134 0.0897 0.34 CD4_TCM L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 8.54e-02 -0.125 0.0722 0.34 CD4_TCM L2
ENSG00000134644 PUM1 -224289 sc-eQTL 8.67e-01 -0.0108 0.0644 0.34 CD4_TCM L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 5.43e-01 -0.0325 0.0534 0.34 CD4_TCM L2
ENSG00000162517 PEF1 -803194 sc-eQTL 8.22e-01 0.0162 0.0716 0.34 CD4_TCM L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 3.00e-01 -0.0702 0.0676 0.34 CD4_TCM L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 4.97e-01 -0.0514 0.0754 0.34 CD4_TCM L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 7.15e-01 -0.0329 0.0899 0.34 CD4_TEM L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 4.01e-01 0.072 0.0856 0.34 CD4_TEM L2
ENSG00000134644 PUM1 -224289 sc-eQTL 3.74e-01 0.0636 0.0713 0.34 CD4_TEM L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 5.87e-01 -0.0392 0.0722 0.34 CD4_TEM L2
ENSG00000162517 PEF1 -803194 sc-eQTL 8.15e-01 -0.0189 0.0809 0.34 CD4_TEM L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 3.91e-01 0.0725 0.0844 0.34 CD4_TEM L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 9.19e-01 -0.00845 0.0833 0.34 CD4_TEM L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 8.33e-01 0.0206 0.0974 0.34 CD8_CTL L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 2.82e-01 0.0804 0.0745 0.34 CD8_CTL L2
ENSG00000134644 PUM1 -224289 sc-eQTL 8.17e-01 -0.0168 0.0725 0.34 CD8_CTL L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 1.39e-01 0.119 0.0799 0.34 CD8_CTL L2
ENSG00000162517 PEF1 -803194 sc-eQTL 1.18e-01 0.109 0.0695 0.34 CD8_CTL L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 7.95e-01 -0.022 0.0844 0.34 CD8_CTL L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 3.81e-01 0.0696 0.0793 0.34 CD8_CTL L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 7.52e-01 -0.0284 0.0899 0.34 CD8_Naive L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 8.74e-01 0.0123 0.0775 0.34 CD8_Naive L2
ENSG00000134644 PUM1 -224289 sc-eQTL 5.07e-01 -0.0415 0.0623 0.34 CD8_Naive L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 1.45e-01 -0.0869 0.0595 0.34 CD8_Naive L2
ENSG00000162517 PEF1 -803194 sc-eQTL 8.54e-01 -0.0153 0.0831 0.34 CD8_Naive L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 6.02e-01 -0.0389 0.0746 0.34 CD8_Naive L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 8.79e-01 -0.0124 0.0812 0.34 CD8_Naive L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 6.99e-01 -0.0392 0.101 0.345 CD8_TCM L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 5.54e-01 -0.0548 0.0925 0.345 CD8_TCM L2
ENSG00000134644 PUM1 -224289 sc-eQTL 2.86e-01 -0.0929 0.0868 0.345 CD8_TCM L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 5.84e-01 0.0499 0.0911 0.345 CD8_TCM L2
ENSG00000162517 PEF1 -803194 sc-eQTL 2.81e-01 -0.1 0.0928 0.345 CD8_TCM L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 5.28e-01 -0.0533 0.0843 0.345 CD8_TCM L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 4.38e-02 -0.171 0.0844 0.345 CD8_TCM L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 2.71e-01 0.105 0.0954 0.336 CD8_TEM L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 1.75e-01 0.124 0.0913 0.336 CD8_TEM L2
ENSG00000134644 PUM1 -224289 sc-eQTL 6.76e-02 -0.171 0.093 0.336 CD8_TEM L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 6.33e-01 0.0421 0.0882 0.336 CD8_TEM L2
ENSG00000162517 PEF1 -803194 sc-eQTL 5.33e-01 -0.0519 0.083 0.336 CD8_TEM L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 5.43e-02 0.176 0.0907 0.336 CD8_TEM L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 4.94e-02 -0.162 0.082 0.336 CD8_TEM L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 7.45e-01 -0.0312 0.0959 0.338 MAIT L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 2.70e-02 0.187 0.084 0.338 MAIT L2
ENSG00000134644 PUM1 -224289 sc-eQTL 6.17e-01 0.0408 0.0814 0.338 MAIT L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 4.14e-01 0.0629 0.0767 0.338 MAIT L2
ENSG00000162517 PEF1 -803194 sc-eQTL 1.19e-01 0.132 0.084 0.338 MAIT L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 8.75e-01 -0.0135 0.0856 0.338 MAIT L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 8.75e-01 0.0138 0.0882 0.338 MAIT L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 7.64e-01 -0.0298 0.0989 0.333 NK_CD56bright L2
ENSG00000121753 ADGRB2 -923191 sc-eQTL 6.50e-01 -0.0352 0.0774 0.333 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 7.37e-01 0.0281 0.0836 0.333 NK_CD56bright L2
ENSG00000134644 PUM1 -224289 sc-eQTL 3.76e-01 0.0778 0.0876 0.333 NK_CD56bright L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 9.38e-01 -0.0067 0.0866 0.333 NK_CD56bright L2
ENSG00000162517 PEF1 -803194 sc-eQTL 1.38e-01 -0.125 0.0836 0.333 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 8.03e-01 0.0217 0.087 0.333 NK_CD56bright L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 7.38e-02 -0.153 0.085 0.333 NK_CD56bright L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 5.02e-01 -0.0623 0.0926 0.338 NK_CD56dim L2
ENSG00000121753 ADGRB2 -923191 sc-eQTL 7.44e-01 0.0267 0.0816 0.338 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 1.34e-01 0.103 0.0682 0.338 NK_CD56dim L2
ENSG00000134644 PUM1 -224289 sc-eQTL 4.79e-01 -0.0498 0.0703 0.338 NK_CD56dim L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 7.18e-01 0.0271 0.075 0.338 NK_CD56dim L2
ENSG00000162517 PEF1 -803194 sc-eQTL 1.48e-01 -0.0966 0.0664 0.338 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 8.13e-01 -0.0223 0.094 0.338 NK_CD56dim L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 2.79e-01 -0.0839 0.0773 0.338 NK_CD56dim L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 4.31e-01 -0.0781 0.0989 0.333 NK_HLA L2
ENSG00000121753 ADGRB2 -923191 sc-eQTL 3.63e-01 0.0716 0.0785 0.333 NK_HLA L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 7.61e-01 -0.027 0.0884 0.333 NK_HLA L2
ENSG00000134644 PUM1 -224289 sc-eQTL 2.51e-01 -0.0988 0.0859 0.333 NK_HLA L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 9.41e-01 0.00609 0.0823 0.333 NK_HLA L2
ENSG00000162517 PEF1 -803194 sc-eQTL 7.43e-01 -0.0304 0.0927 0.333 NK_HLA L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 1.47e-01 0.127 0.087 0.333 NK_HLA L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 4.69e-01 -0.0613 0.0845 0.333 NK_HLA L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 7.38e-01 0.0301 0.0898 0.338 NK_cytokine L2
ENSG00000121753 ADGRB2 -923191 sc-eQTL 8.75e-01 0.0128 0.0812 0.338 NK_cytokine L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 4.45e-01 -0.0536 0.07 0.338 NK_cytokine L2
ENSG00000134644 PUM1 -224289 sc-eQTL 5.31e-01 0.0475 0.0758 0.338 NK_cytokine L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 9.86e-01 -0.00151 0.0835 0.338 NK_cytokine L2
ENSG00000162517 PEF1 -803194 sc-eQTL 8.67e-01 -0.012 0.0711 0.338 NK_cytokine L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 1.35e-01 -0.132 0.088 0.338 NK_cytokine L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 9.67e-01 0.00345 0.0823 0.338 NK_cytokine L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 3.21e-01 0.104 0.105 0.322 PB L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 8.34e-01 0.0255 0.122 0.322 PB L2
ENSG00000134644 PUM1 -224289 sc-eQTL 8.83e-01 0.0156 0.106 0.322 PB L2
ENSG00000162510 MATN1 118117 sc-eQTL 3.49e-01 0.0924 0.0983 0.322 PB L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 2.78e-01 -0.0765 0.0701 0.322 PB L2
ENSG00000162517 PEF1 -803194 sc-eQTL 4.96e-01 0.074 0.108 0.322 PB L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 6.48e-02 0.177 0.095 0.322 PB L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 4.10e-01 -0.0848 0.102 0.322 PB L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 1.93e-01 0.0927 0.071 0.339 Pro_T L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 3.13e-02 -0.194 0.0895 0.339 Pro_T L2
ENSG00000134644 PUM1 -224289 sc-eQTL 6.69e-01 0.0361 0.0844 0.339 Pro_T L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 9.00e-01 -0.0076 0.0606 0.339 Pro_T L2
ENSG00000162517 PEF1 -803194 sc-eQTL 1.62e-01 0.124 0.0885 0.339 Pro_T L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 6.68e-01 -0.0364 0.0846 0.339 Pro_T L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 3.81e-01 -0.0682 0.0777 0.339 Pro_T L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 4.01e-01 -0.0769 0.0915 0.34 Treg L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 8.90e-01 -0.0122 0.0886 0.34 Treg L2
ENSG00000134644 PUM1 -224289 sc-eQTL 6.87e-01 -0.0286 0.0709 0.34 Treg L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 1.35e-01 -0.121 0.0808 0.34 Treg L2
ENSG00000162517 PEF1 -803194 sc-eQTL 3.53e-01 -0.0815 0.0875 0.34 Treg L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 6.35e-01 0.0393 0.0827 0.34 Treg L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 2.32e-01 -0.0987 0.0824 0.34 Treg L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 6.87e-01 0.0387 0.0957 0.334 cDC L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 9.88e-02 0.171 0.103 0.334 cDC L2
ENSG00000134644 PUM1 -224289 sc-eQTL 8.25e-01 0.0197 0.089 0.334 cDC L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 3.41e-01 -0.0595 0.0622 0.334 cDC L2
ENSG00000162517 PEF1 -803194 sc-eQTL 9.52e-01 -0.0054 0.0903 0.334 cDC L2
ENSG00000168528 SERINC2 -567863 sc-eQTL 1.71e-01 -0.109 0.0797 0.334 cDC L2
ENSG00000284543 LINC01226 -664524 sc-eQTL 5.00e-01 0.0531 0.0786 0.334 cDC L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 1.90e-02 -0.198 0.0834 0.334 cDC L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 9.10e-01 0.00852 0.0749 0.34 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 3.36e-01 0.0804 0.0834 0.34 cMono_IL1B L2
ENSG00000134644 PUM1 -224289 sc-eQTL 4.33e-02 -0.114 0.056 0.34 cMono_IL1B L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 2.67e-01 -0.055 0.0495 0.34 cMono_IL1B L2
ENSG00000162512 SDC3 -67056 sc-eQTL 8.43e-01 -0.0186 0.0935 0.34 cMono_IL1B L2
ENSG00000162517 PEF1 -803194 sc-eQTL 8.54e-01 -0.0141 0.0764 0.34 cMono_IL1B L2
ENSG00000168528 SERINC2 -567863 sc-eQTL 9.14e-01 -0.0102 0.0946 0.34 cMono_IL1B L2
ENSG00000284543 LINC01226 -664524 sc-eQTL 8.83e-01 -0.0123 0.0837 0.34 cMono_IL1B L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 2.10e-01 -0.0977 0.0777 0.34 cMono_IL1B L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 8.38e-01 0.0161 0.0786 0.34 cMono_S100A L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 4.13e-01 0.0761 0.0928 0.34 cMono_S100A L2
ENSG00000134644 PUM1 -224289 sc-eQTL 9.36e-02 -0.112 0.0667 0.34 cMono_S100A L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 1.06e-01 -0.0832 0.0513 0.34 cMono_S100A L2
ENSG00000162512 SDC3 -67056 sc-eQTL 4.65e-01 -0.0652 0.089 0.34 cMono_S100A L2
ENSG00000162517 PEF1 -803194 sc-eQTL 2.15e-01 0.0998 0.0802 0.34 cMono_S100A L2
ENSG00000168528 SERINC2 -567863 sc-eQTL 6.98e-01 -0.0366 0.0944 0.34 cMono_S100A L2
ENSG00000284543 LINC01226 -664524 sc-eQTL 4.18e-01 0.0621 0.0766 0.34 cMono_S100A L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 4.91e-02 -0.151 0.0763 0.34 cMono_S100A L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 5.95e-01 0.0607 0.114 0.358 gdT L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 4.42e-01 -0.0754 0.0978 0.358 gdT L2
ENSG00000134644 PUM1 -224289 sc-eQTL 7.81e-01 0.0281 0.101 0.358 gdT L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 2.93e-02 -0.238 0.108 0.358 gdT L2
ENSG00000162517 PEF1 -803194 sc-eQTL 7.01e-01 -0.0386 0.1 0.358 gdT L2
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 3.35e-01 0.0977 0.101 0.358 gdT L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 3.80e-01 0.0863 0.0979 0.358 gdT L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 5.79e-01 0.0488 0.0878 0.34 intMono L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 7.62e-02 0.167 0.0937 0.34 intMono L2
ENSG00000134644 PUM1 -224289 sc-eQTL 5.22e-01 -0.0513 0.08 0.34 intMono L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 7.84e-01 -0.0172 0.0628 0.34 intMono L2
ENSG00000162512 SDC3 -67056 sc-eQTL 3.54e-01 0.0798 0.0859 0.34 intMono L2
ENSG00000162517 PEF1 -803194 sc-eQTL 4.33e-01 0.0709 0.0903 0.34 intMono L2
ENSG00000168528 SERINC2 -567863 sc-eQTL 6.06e-01 -0.0466 0.09 0.34 intMono L2
ENSG00000284543 LINC01226 -664524 sc-eQTL 4.55e-01 0.0639 0.0852 0.34 intMono L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 5.22e-01 -0.0548 0.0853 0.34 intMono L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 8.80e-01 0.0128 0.0848 0.33 ncMono L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 9.54e-01 0.00519 0.0905 0.33 ncMono L2
ENSG00000134644 PUM1 -224289 sc-eQTL 5.93e-01 -0.0396 0.0739 0.33 ncMono L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 3.69e-01 -0.0604 0.067 0.33 ncMono L2
ENSG00000162512 SDC3 -67056 sc-eQTL 8.30e-01 -0.0161 0.0753 0.33 ncMono L2
ENSG00000162517 PEF1 -803194 sc-eQTL 7.61e-01 0.0262 0.0863 0.33 ncMono L2
ENSG00000168528 SERINC2 -567863 sc-eQTL 9.38e-01 0.00636 0.0821 0.33 ncMono L2
ENSG00000284543 LINC01226 -664524 sc-eQTL 2.45e-01 -0.0954 0.0818 0.33 ncMono L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 1.10e-03 -0.274 0.0828 0.33 ncMono L2
ENSG00000060688 SNRNP40 -455086 sc-eQTL 3.19e-01 0.0971 0.0972 0.325 pDC L2
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 9.47e-03 0.275 0.105 0.325 pDC L2
ENSG00000134644 PUM1 -224289 sc-eQTL 7.64e-01 -0.0267 0.0887 0.325 pDC L2
ENSG00000162511 LAPTM5 83928 sc-eQTL 2.85e-01 0.0882 0.0822 0.325 pDC L2
ENSG00000162517 PEF1 -803194 sc-eQTL 8.89e-01 0.0149 0.107 0.325 pDC L2
ENSG00000168528 SERINC2 -567863 sc-eQTL 8.72e-01 -0.0162 0.1 0.325 pDC L2
ENSG00000284543 LINC01226 -664524 sc-eQTL 9.49e-01 -0.00502 0.0777 0.325 pDC L2
ENSG00000287510 AL137857.1 110009 sc-eQTL 7.53e-01 0.0288 0.0913 0.325 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -455086 sc-eQTL 9.89e-01 -0.00126 0.0932 0.34 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 5.96e-01 0.0411 0.0776 0.34 B_Memory LOneK1K
ENSG00000134644 PUM1 -224289 sc-eQTL 6.18e-01 0.0344 0.0687 0.34 B_Memory LOneK1K
ENSG00000162510 MATN1 118117 sc-eQTL 4.77e-01 0.0558 0.0783 0.34 B_Memory LOneK1K
ENSG00000162511 LAPTM5 83928 sc-eQTL 3.01e-02 -0.106 0.0487 0.34 B_Memory LOneK1K
ENSG00000162517 PEF1 -803194 sc-eQTL 3.04e-02 -0.176 0.0807 0.34 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 9.41e-01 0.00483 0.0652 0.34 B_Memory LOneK1K
ENSG00000287510 AL137857.1 110009 sc-eQTL 5.89e-02 -0.134 0.0704 0.34 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -455086 sc-eQTL 6.89e-01 0.0341 0.0851 0.34 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 3.05e-01 0.0691 0.0672 0.34 B_Naive LOneK1K
ENSG00000134644 PUM1 -224289 sc-eQTL 3.87e-01 -0.0551 0.0636 0.34 B_Naive LOneK1K
ENSG00000162510 MATN1 118117 sc-eQTL 7.29e-01 -0.0213 0.0613 0.34 B_Naive LOneK1K
ENSG00000162511 LAPTM5 83928 sc-eQTL 7.33e-02 -0.0771 0.0428 0.34 B_Naive LOneK1K
ENSG00000162517 PEF1 -803194 sc-eQTL 6.05e-01 -0.0408 0.0788 0.34 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 3.76e-02 -0.115 0.0552 0.34 B_Naive LOneK1K
ENSG00000287510 AL137857.1 110009 sc-eQTL 1.74e-01 -0.0899 0.066 0.34 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -455086 sc-eQTL 5.97e-01 0.0374 0.0706 0.34 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 1.55e-01 0.114 0.0797 0.34 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -224289 sc-eQTL 1.11e-02 -0.129 0.0503 0.34 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 83928 sc-eQTL 2.09e-01 -0.0564 0.0447 0.34 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -67056 sc-eQTL 4.29e-01 -0.0724 0.0914 0.34 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -803194 sc-eQTL 6.72e-01 0.0273 0.0643 0.34 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -567863 sc-eQTL 9.18e-01 -0.00967 0.0942 0.34 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -664524 sc-eQTL 8.04e-01 0.0192 0.0772 0.34 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 110009 sc-eQTL 3.53e-02 -0.152 0.0715 0.34 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -455086 sc-eQTL 9.19e-01 -0.00803 0.0785 0.338 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 3.90e-02 0.177 0.085 0.338 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -224289 sc-eQTL 1.91e-01 -0.0919 0.0701 0.338 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 83928 sc-eQTL 5.37e-01 -0.0348 0.0563 0.338 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -67056 sc-eQTL 3.44e-01 0.0779 0.0821 0.338 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -803194 sc-eQTL 8.47e-01 0.0144 0.0747 0.338 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -567863 sc-eQTL 8.35e-01 -0.0178 0.0853 0.338 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -664524 sc-eQTL 4.78e-01 0.0575 0.0808 0.338 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 110009 sc-eQTL 1.49e-02 -0.196 0.0799 0.338 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -455086 sc-eQTL 4.28e-01 -0.07 0.0881 0.338 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -923191 sc-eQTL 7.58e-01 0.0232 0.0752 0.338 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -455280 sc-eQTL 3.67e-01 0.0544 0.0602 0.338 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -224289 sc-eQTL 4.26e-01 -0.0526 0.066 0.338 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 83928 sc-eQTL 6.82e-01 0.0303 0.0738 0.338 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -803194 sc-eQTL 4.01e-01 -0.0472 0.056 0.338 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 123198 sc-eQTL 6.69e-01 -0.0365 0.0851 0.338 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 110009 sc-eQTL 3.87e-01 -0.0636 0.0734 0.338 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -455280 eQTL 1.48e-02 -0.0454 0.0186 0.0 0.0 0.316
ENSG00000162511 LAPTM5 83928 eQTL 0.0163 0.0252 0.0105 0.0 0.0 0.316

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -455280 8.25e-07 5.74e-07 1.14e-07 3.87e-07 1.18e-07 2.16e-07 5.49e-07 1.59e-07 4.74e-07 2.62e-07 7.32e-07 3.91e-07 7.93e-07 1.49e-07 2.26e-07 2.69e-07 3.69e-07 4.11e-07 2.25e-07 1.63e-07 2.17e-07 4.11e-07 3.77e-07 1.8e-07 8.09e-07 2.7e-07 2.94e-07 2.59e-07 3.99e-07 6.27e-07 3.1e-07 6.77e-08 4.62e-08 1.54e-07 3.3e-07 1.18e-07 8.28e-08 1.09e-07 6.63e-08 2.59e-08 8.61e-08 5.52e-07 3.55e-08 5.61e-09 1.33e-07 1.35e-08 1.21e-07 2.25e-08 6.15e-08