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Genes within 1Mb (chr1:30841338:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -455450 sc-eQTL 4.95e-01 0.0916 0.134 0.904 B L1
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 3.65e-01 -0.0974 0.107 0.904 B L1
ENSG00000134644 PUM1 -224653 sc-eQTL 3.74e-01 0.0801 0.09 0.904 B L1
ENSG00000162510 MATN1 117753 sc-eQTL 7.67e-01 0.0281 0.0948 0.904 B L1
ENSG00000162511 LAPTM5 83564 sc-eQTL 2.66e-01 -0.0825 0.074 0.904 B L1
ENSG00000162517 PEF1 -803558 sc-eQTL 4.37e-01 -0.0873 0.112 0.904 B L1
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 9.52e-01 0.00529 0.087 0.904 B L1
ENSG00000287510 AL137857.1 109645 sc-eQTL 5.18e-01 0.0666 0.103 0.904 B L1
ENSG00000060688 SNRNP40 -455450 sc-eQTL 3.49e-01 0.107 0.114 0.904 CD4T L1
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 3.20e-01 0.0884 0.0888 0.904 CD4T L1
ENSG00000134644 PUM1 -224653 sc-eQTL 8.88e-01 -0.0112 0.0792 0.904 CD4T L1
ENSG00000162511 LAPTM5 83564 sc-eQTL 4.86e-01 0.0612 0.0877 0.904 CD4T L1
ENSG00000162517 PEF1 -803558 sc-eQTL 3.29e-01 0.0895 0.0916 0.904 CD4T L1
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 2.50e-01 0.0903 0.0783 0.904 CD4T L1
ENSG00000287510 AL137857.1 109645 sc-eQTL 7.06e-01 0.0355 0.094 0.904 CD4T L1
ENSG00000060688 SNRNP40 -455450 sc-eQTL 7.54e-01 0.0484 0.154 0.904 CD8T L1
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 1.89e-01 -0.134 0.102 0.904 CD8T L1
ENSG00000134644 PUM1 -224653 sc-eQTL 4.07e-01 0.0749 0.09 0.904 CD8T L1
ENSG00000162511 LAPTM5 83564 sc-eQTL 5.39e-01 0.0538 0.0875 0.904 CD8T L1
ENSG00000162517 PEF1 -803558 sc-eQTL 3.75e-01 0.0957 0.108 0.904 CD8T L1
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 1.64e-01 0.143 0.102 0.904 CD8T L1
ENSG00000287510 AL137857.1 109645 sc-eQTL 5.57e-01 -0.0757 0.129 0.904 CD8T L1
ENSG00000060688 SNRNP40 -455450 sc-eQTL 9.97e-01 0.000617 0.143 0.908 DC L1
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 2.00e-01 0.216 0.168 0.908 DC L1
ENSG00000134644 PUM1 -224653 sc-eQTL 8.85e-01 -0.0191 0.132 0.908 DC L1
ENSG00000162511 LAPTM5 83564 sc-eQTL 1.08e-01 -0.152 0.0938 0.908 DC L1
ENSG00000162517 PEF1 -803558 sc-eQTL 7.65e-01 0.0458 0.153 0.908 DC L1
ENSG00000168528 SERINC2 -568227 sc-eQTL 3.00e-01 0.161 0.155 0.908 DC L1
ENSG00000284543 LINC01226 -664888 sc-eQTL 2.57e-01 -0.117 0.103 0.908 DC L1
ENSG00000287510 AL137857.1 109645 sc-eQTL 7.73e-01 0.0431 0.149 0.908 DC L1
ENSG00000060688 SNRNP40 -455450 sc-eQTL 9.30e-01 0.00926 0.105 0.904 Mono L1
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 9.37e-02 -0.217 0.129 0.904 Mono L1
ENSG00000134644 PUM1 -224653 sc-eQTL 3.25e-01 -0.082 0.0832 0.904 Mono L1
ENSG00000162511 LAPTM5 83564 sc-eQTL 1.51e-01 -0.11 0.0763 0.904 Mono L1
ENSG00000162512 SDC3 -67420 sc-eQTL 5.62e-01 -0.0855 0.147 0.904 Mono L1
ENSG00000162517 PEF1 -803558 sc-eQTL 3.61e-01 -0.0945 0.103 0.904 Mono L1
ENSG00000168528 SERINC2 -568227 sc-eQTL 4.67e-04 0.546 0.154 0.904 Mono L1
ENSG00000284543 LINC01226 -664888 sc-eQTL 4.78e-01 0.0989 0.139 0.904 Mono L1
ENSG00000287510 AL137857.1 109645 sc-eQTL 9.58e-02 -0.202 0.121 0.904 Mono L1
ENSG00000060688 SNRNP40 -455450 sc-eQTL 3.61e-01 0.133 0.145 0.903 NK L1
ENSG00000121753 ADGRB2 -923555 sc-eQTL 2.15e-01 0.155 0.125 0.903 NK L1
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 4.31e-01 -0.0785 0.0996 0.903 NK L1
ENSG00000134644 PUM1 -224653 sc-eQTL 4.27e-01 -0.0831 0.104 0.903 NK L1
ENSG00000162511 LAPTM5 83564 sc-eQTL 7.21e-01 0.0431 0.12 0.903 NK L1
ENSG00000162517 PEF1 -803558 sc-eQTL 8.58e-01 0.0158 0.0879 0.903 NK L1
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 4.14e-01 0.111 0.135 0.903 NK L1
ENSG00000287510 AL137857.1 109645 sc-eQTL 6.50e-01 -0.0567 0.125 0.903 NK L1
ENSG00000060688 SNRNP40 -455450 sc-eQTL 3.54e-02 0.234 0.11 0.904 Other_T L1
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 1.94e-01 -0.155 0.119 0.904 Other_T L1
ENSG00000134644 PUM1 -224653 sc-eQTL 9.20e-01 -0.0108 0.107 0.904 Other_T L1
ENSG00000162511 LAPTM5 83564 sc-eQTL 3.97e-01 0.0745 0.0878 0.904 Other_T L1
ENSG00000162517 PEF1 -803558 sc-eQTL 5.43e-01 -0.0715 0.117 0.904 Other_T L1
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 9.25e-01 -0.0135 0.144 0.904 Other_T L1
ENSG00000287510 AL137857.1 109645 sc-eQTL 2.59e-01 0.169 0.15 0.904 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -455450 sc-eQTL 1.80e-01 0.234 0.174 0.901 B_Activated L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 2.25e-01 0.214 0.176 0.901 B_Activated L2
ENSG00000134644 PUM1 -224653 sc-eQTL 6.53e-01 -0.074 0.164 0.901 B_Activated L2
ENSG00000162510 MATN1 117753 sc-eQTL 9.08e-01 0.0166 0.143 0.901 B_Activated L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 3.55e-01 -0.0926 0.0998 0.901 B_Activated L2
ENSG00000162517 PEF1 -803558 sc-eQTL 8.67e-01 -0.0286 0.17 0.901 B_Activated L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 7.09e-01 -0.0605 0.162 0.901 B_Activated L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 5.49e-01 -0.0858 0.143 0.901 B_Activated L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 2.54e-01 0.19 0.166 0.903 B_Intermediate L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 9.93e-01 0.00119 0.139 0.903 B_Intermediate L2
ENSG00000134644 PUM1 -224653 sc-eQTL 7.40e-01 0.0435 0.131 0.903 B_Intermediate L2
ENSG00000162510 MATN1 117753 sc-eQTL 5.06e-01 -0.0908 0.136 0.903 B_Intermediate L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 9.91e-01 0.0009 0.0839 0.903 B_Intermediate L2
ENSG00000162517 PEF1 -803558 sc-eQTL 5.39e-01 -0.0957 0.156 0.903 B_Intermediate L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 3.70e-01 0.105 0.117 0.903 B_Intermediate L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 8.05e-01 -0.0326 0.132 0.903 B_Intermediate L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 2.89e-01 0.172 0.162 0.907 B_Memory L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 2.42e-01 -0.175 0.149 0.907 B_Memory L2
ENSG00000134644 PUM1 -224653 sc-eQTL 7.32e-01 0.0446 0.13 0.907 B_Memory L2
ENSG00000162510 MATN1 117753 sc-eQTL 4.04e-01 0.104 0.125 0.907 B_Memory L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 8.23e-01 0.0248 0.111 0.907 B_Memory L2
ENSG00000162517 PEF1 -803558 sc-eQTL 1.10e-01 -0.236 0.147 0.907 B_Memory L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 4.22e-01 -0.102 0.126 0.907 B_Memory L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 4.08e-01 -0.123 0.148 0.907 B_Memory L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 8.57e-01 -0.026 0.144 0.904 B_Naive1 L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 1.33e-01 -0.187 0.124 0.904 B_Naive1 L2
ENSG00000134644 PUM1 -224653 sc-eQTL 3.23e-01 0.109 0.11 0.904 B_Naive1 L2
ENSG00000162510 MATN1 117753 sc-eQTL 5.10e-01 0.0737 0.112 0.904 B_Naive1 L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 6.11e-01 -0.0379 0.0745 0.904 B_Naive1 L2
ENSG00000162517 PEF1 -803558 sc-eQTL 4.23e-01 0.105 0.131 0.904 B_Naive1 L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 9.47e-01 -0.00646 0.098 0.904 B_Naive1 L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 9.57e-01 -0.0065 0.121 0.904 B_Naive1 L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 2.15e-01 0.192 0.154 0.906 B_Naive2 L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 8.66e-01 -0.0216 0.128 0.906 B_Naive2 L2
ENSG00000134644 PUM1 -224653 sc-eQTL 7.63e-01 0.0377 0.125 0.906 B_Naive2 L2
ENSG00000162510 MATN1 117753 sc-eQTL 2.01e-01 0.154 0.12 0.906 B_Naive2 L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 9.78e-01 0.00229 0.0816 0.906 B_Naive2 L2
ENSG00000162517 PEF1 -803558 sc-eQTL 5.97e-01 0.0786 0.148 0.906 B_Naive2 L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 8.65e-01 -0.0202 0.119 0.906 B_Naive2 L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 1.27e-01 0.195 0.128 0.906 B_Naive2 L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 2.95e-01 0.17 0.161 0.907 CD4_CTL L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 9.02e-01 -0.0197 0.159 0.907 CD4_CTL L2
ENSG00000134644 PUM1 -224653 sc-eQTL 6.57e-01 0.0693 0.156 0.907 CD4_CTL L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 3.45e-01 0.132 0.139 0.907 CD4_CTL L2
ENSG00000162517 PEF1 -803558 sc-eQTL 2.49e-03 0.427 0.139 0.907 CD4_CTL L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 5.69e-01 0.0868 0.152 0.907 CD4_CTL L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 8.02e-01 0.0337 0.134 0.907 CD4_CTL L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 9.29e-01 -0.0107 0.119 0.904 CD4_Naive L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 2.88e-01 0.112 0.105 0.904 CD4_Naive L2
ENSG00000134644 PUM1 -224653 sc-eQTL 9.23e-01 -0.00811 0.0843 0.904 CD4_Naive L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 7.21e-01 0.0323 0.0902 0.904 CD4_Naive L2
ENSG00000162517 PEF1 -803558 sc-eQTL 8.25e-01 -0.0219 0.099 0.904 CD4_Naive L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 9.25e-01 0.00861 0.0916 0.904 CD4_Naive L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 7.18e-01 0.038 0.105 0.904 CD4_Naive L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 3.69e-01 0.136 0.151 0.904 CD4_TCM L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 3.89e-01 -0.105 0.122 0.904 CD4_TCM L2
ENSG00000134644 PUM1 -224653 sc-eQTL 9.75e-01 -0.00342 0.108 0.904 CD4_TCM L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 1.58e-01 0.126 0.089 0.904 CD4_TCM L2
ENSG00000162517 PEF1 -803558 sc-eQTL 2.39e-02 0.269 0.118 0.904 CD4_TCM L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 5.69e-01 0.0647 0.113 0.904 CD4_TCM L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 9.98e-01 -0.000239 0.126 0.904 CD4_TCM L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 6.67e-01 0.0647 0.15 0.904 CD4_TEM L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 2.94e-01 0.15 0.143 0.904 CD4_TEM L2
ENSG00000134644 PUM1 -224653 sc-eQTL 8.68e-01 0.0198 0.119 0.904 CD4_TEM L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 3.84e-01 0.105 0.12 0.904 CD4_TEM L2
ENSG00000162517 PEF1 -803558 sc-eQTL 1.84e-01 0.18 0.135 0.904 CD4_TEM L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 5.16e-02 0.274 0.14 0.904 CD4_TEM L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 9.39e-01 -0.0107 0.139 0.904 CD4_TEM L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 2.62e-01 0.189 0.168 0.904 CD8_CTL L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 1.17e-01 -0.202 0.129 0.904 CD8_CTL L2
ENSG00000134644 PUM1 -224653 sc-eQTL 4.04e-01 0.105 0.125 0.904 CD8_CTL L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 6.54e-01 -0.0624 0.139 0.904 CD8_CTL L2
ENSG00000162517 PEF1 -803558 sc-eQTL 4.76e-03 0.339 0.119 0.904 CD8_CTL L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 8.39e-01 -0.0297 0.146 0.904 CD8_CTL L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 4.56e-01 0.103 0.137 0.904 CD8_CTL L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 8.68e-01 0.0256 0.153 0.904 CD8_Naive L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 2.77e-01 -0.144 0.132 0.904 CD8_Naive L2
ENSG00000134644 PUM1 -224653 sc-eQTL 7.30e-01 0.0368 0.106 0.904 CD8_Naive L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 8.12e-01 0.0242 0.102 0.904 CD8_Naive L2
ENSG00000162517 PEF1 -803558 sc-eQTL 2.97e-01 -0.148 0.141 0.904 CD8_Naive L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 6.57e-02 0.233 0.126 0.904 CD8_Naive L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 3.07e-01 -0.141 0.138 0.904 CD8_Naive L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 6.73e-01 -0.0739 0.175 0.91 CD8_TCM L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 6.38e-01 -0.0755 0.16 0.91 CD8_TCM L2
ENSG00000134644 PUM1 -224653 sc-eQTL 1.98e-01 -0.194 0.15 0.91 CD8_TCM L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 9.07e-01 -0.0185 0.158 0.91 CD8_TCM L2
ENSG00000162517 PEF1 -803558 sc-eQTL 3.99e-01 -0.136 0.161 0.91 CD8_TCM L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 1.87e-02 0.342 0.144 0.91 CD8_TCM L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 6.09e-02 -0.276 0.146 0.91 CD8_TCM L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 7.56e-01 0.0522 0.168 0.906 CD8_TEM L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 9.26e-01 0.015 0.161 0.906 CD8_TEM L2
ENSG00000134644 PUM1 -224653 sc-eQTL 1.83e-01 -0.219 0.164 0.906 CD8_TEM L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 3.85e-01 0.135 0.155 0.906 CD8_TEM L2
ENSG00000162517 PEF1 -803558 sc-eQTL 3.94e-01 0.125 0.146 0.906 CD8_TEM L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 8.81e-01 0.024 0.161 0.906 CD8_TEM L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 5.82e-01 -0.0802 0.146 0.906 CD8_TEM L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 7.91e-01 0.0445 0.168 0.909 MAIT L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 9.81e-01 -0.00362 0.149 0.909 MAIT L2
ENSG00000134644 PUM1 -224653 sc-eQTL 8.56e-02 0.244 0.141 0.909 MAIT L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 4.80e-01 0.0951 0.134 0.909 MAIT L2
ENSG00000162517 PEF1 -803558 sc-eQTL 5.18e-01 -0.0954 0.148 0.909 MAIT L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 5.78e-01 0.0834 0.15 0.909 MAIT L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 4.42e-01 -0.119 0.154 0.909 MAIT L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 7.53e-01 0.0526 0.167 0.902 NK_CD56bright L2
ENSG00000121753 ADGRB2 -923555 sc-eQTL 4.44e-01 -0.1 0.13 0.902 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 5.76e-01 -0.0789 0.141 0.902 NK_CD56bright L2
ENSG00000134644 PUM1 -224653 sc-eQTL 8.90e-01 -0.0205 0.148 0.902 NK_CD56bright L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 9.68e-01 0.00581 0.146 0.902 NK_CD56bright L2
ENSG00000162517 PEF1 -803558 sc-eQTL 6.79e-02 0.258 0.141 0.902 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 2.36e-01 0.174 0.146 0.902 NK_CD56bright L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 9.63e-01 -0.00663 0.145 0.902 NK_CD56bright L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 1.90e-01 0.201 0.153 0.903 NK_CD56dim L2
ENSG00000121753 ADGRB2 -923555 sc-eQTL 4.22e-01 0.109 0.135 0.903 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 9.18e-01 0.0116 0.114 0.903 NK_CD56dim L2
ENSG00000134644 PUM1 -224653 sc-eQTL 4.42e-01 -0.0896 0.116 0.903 NK_CD56dim L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 6.22e-01 0.0613 0.124 0.903 NK_CD56dim L2
ENSG00000162517 PEF1 -803558 sc-eQTL 6.64e-01 0.048 0.11 0.903 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 7.35e-01 -0.0528 0.156 0.903 NK_CD56dim L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 8.61e-01 0.0225 0.128 0.903 NK_CD56dim L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 3.59e-01 -0.15 0.164 0.897 NK_HLA L2
ENSG00000121753 ADGRB2 -923555 sc-eQTL 5.76e-01 0.073 0.13 0.897 NK_HLA L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 7.03e-01 -0.056 0.146 0.897 NK_HLA L2
ENSG00000134644 PUM1 -224653 sc-eQTL 7.71e-02 -0.252 0.142 0.897 NK_HLA L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 4.85e-01 -0.0953 0.136 0.897 NK_HLA L2
ENSG00000162517 PEF1 -803558 sc-eQTL 5.00e-02 0.3 0.152 0.897 NK_HLA L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 8.95e-01 0.0192 0.145 0.897 NK_HLA L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 3.12e-01 -0.142 0.14 0.897 NK_HLA L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 3.90e-01 0.131 0.152 0.903 NK_cytokine L2
ENSG00000121753 ADGRB2 -923555 sc-eQTL 3.63e-02 0.287 0.136 0.903 NK_cytokine L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 7.03e-01 -0.0454 0.119 0.903 NK_cytokine L2
ENSG00000134644 PUM1 -224653 sc-eQTL 3.98e-01 -0.109 0.128 0.903 NK_cytokine L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 9.69e-01 0.00546 0.142 0.903 NK_cytokine L2
ENSG00000162517 PEF1 -803558 sc-eQTL 3.19e-01 -0.12 0.12 0.903 NK_cytokine L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 2.96e-01 0.157 0.15 0.903 NK_cytokine L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 7.16e-01 -0.0508 0.139 0.903 NK_cytokine L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 7.86e-01 0.0425 0.156 0.881 PB L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 2.13e-01 -0.226 0.18 0.881 PB L2
ENSG00000134644 PUM1 -224653 sc-eQTL 3.15e-01 0.158 0.157 0.881 PB L2
ENSG00000162510 MATN1 117753 sc-eQTL 6.65e-01 0.0637 0.147 0.881 PB L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 3.19e-01 -0.105 0.105 0.881 PB L2
ENSG00000162517 PEF1 -803558 sc-eQTL 6.93e-01 0.064 0.162 0.881 PB L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 6.07e-01 -0.0741 0.144 0.881 PB L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 9.91e-02 0.251 0.151 0.881 PB L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 9.68e-01 0.00473 0.118 0.907 Pro_T L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 6.59e-01 -0.0661 0.15 0.907 Pro_T L2
ENSG00000134644 PUM1 -224653 sc-eQTL 3.14e-02 -0.299 0.138 0.907 Pro_T L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 1.48e-01 0.145 0.0996 0.907 Pro_T L2
ENSG00000162517 PEF1 -803558 sc-eQTL 2.17e-01 0.181 0.146 0.907 Pro_T L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 7.12e-01 0.0517 0.14 0.907 Pro_T L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 7.03e-02 0.232 0.128 0.907 Pro_T L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 2.42e-01 0.184 0.157 0.904 Treg L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 5.80e-01 0.0845 0.153 0.904 Treg L2
ENSG00000134644 PUM1 -224653 sc-eQTL 2.70e-01 -0.135 0.122 0.904 Treg L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 8.39e-01 0.0284 0.14 0.904 Treg L2
ENSG00000162517 PEF1 -803558 sc-eQTL 7.64e-02 -0.267 0.15 0.904 Treg L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 1.69e-02 0.339 0.141 0.904 Treg L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 3.91e-01 -0.122 0.142 0.904 Treg L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 3.97e-01 -0.139 0.164 0.91 cDC L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 4.96e-01 0.121 0.178 0.91 cDC L2
ENSG00000134644 PUM1 -224653 sc-eQTL 7.41e-01 0.0506 0.153 0.91 cDC L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 6.74e-01 -0.0451 0.107 0.91 cDC L2
ENSG00000162517 PEF1 -803558 sc-eQTL 2.30e-01 0.186 0.155 0.91 cDC L2
ENSG00000168528 SERINC2 -568227 sc-eQTL 6.03e-01 0.0716 0.138 0.91 cDC L2
ENSG00000284543 LINC01226 -664888 sc-eQTL 4.73e-01 -0.097 0.135 0.91 cDC L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 3.02e-01 -0.15 0.145 0.91 cDC L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 6.76e-01 0.0517 0.124 0.904 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 6.56e-01 -0.0616 0.138 0.904 cMono_IL1B L2
ENSG00000134644 PUM1 -224653 sc-eQTL 1.75e-01 -0.127 0.093 0.904 cMono_IL1B L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 3.72e-02 -0.17 0.0811 0.904 cMono_IL1B L2
ENSG00000162512 SDC3 -67420 sc-eQTL 4.96e-01 -0.105 0.154 0.904 cMono_IL1B L2
ENSG00000162517 PEF1 -803558 sc-eQTL 5.64e-01 0.0729 0.126 0.904 cMono_IL1B L2
ENSG00000168528 SERINC2 -568227 sc-eQTL 8.80e-04 0.514 0.152 0.904 cMono_IL1B L2
ENSG00000284543 LINC01226 -664888 sc-eQTL 5.65e-01 0.0795 0.138 0.904 cMono_IL1B L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 8.00e-01 -0.0327 0.129 0.904 cMono_IL1B L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 7.45e-01 0.0425 0.131 0.904 cMono_S100A L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 1.17e-02 -0.387 0.152 0.904 cMono_S100A L2
ENSG00000134644 PUM1 -224653 sc-eQTL 4.21e-01 0.0897 0.111 0.904 cMono_S100A L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 1.89e-01 -0.113 0.0854 0.904 cMono_S100A L2
ENSG00000162512 SDC3 -67420 sc-eQTL 5.06e-01 -0.0985 0.148 0.904 cMono_S100A L2
ENSG00000162517 PEF1 -803558 sc-eQTL 4.79e-01 -0.0947 0.134 0.904 cMono_S100A L2
ENSG00000168528 SERINC2 -568227 sc-eQTL 2.12e-04 0.572 0.152 0.904 cMono_S100A L2
ENSG00000284543 LINC01226 -664888 sc-eQTL 1.44e-01 0.186 0.127 0.904 cMono_S100A L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 1.54e-01 -0.182 0.127 0.904 cMono_S100A L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 4.30e-04 0.709 0.197 0.915 gdT L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 9.99e-01 0.000161 0.177 0.915 gdT L2
ENSG00000134644 PUM1 -224653 sc-eQTL 6.38e-01 0.0857 0.182 0.915 gdT L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 1.90e-01 0.259 0.197 0.915 gdT L2
ENSG00000162517 PEF1 -803558 sc-eQTL 2.40e-01 -0.212 0.18 0.915 gdT L2
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 7.21e-01 0.0653 0.182 0.915 gdT L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 3.52e-01 0.165 0.176 0.915 gdT L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 1.50e-01 0.211 0.146 0.9 intMono L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 4.64e-01 -0.116 0.157 0.9 intMono L2
ENSG00000134644 PUM1 -224653 sc-eQTL 1.71e-01 -0.183 0.133 0.9 intMono L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 9.46e-01 -0.0071 0.105 0.9 intMono L2
ENSG00000162512 SDC3 -67420 sc-eQTL 2.67e-01 -0.159 0.143 0.9 intMono L2
ENSG00000162517 PEF1 -803558 sc-eQTL 8.27e-01 0.033 0.151 0.9 intMono L2
ENSG00000168528 SERINC2 -568227 sc-eQTL 3.34e-02 0.318 0.149 0.9 intMono L2
ENSG00000284543 LINC01226 -664888 sc-eQTL 5.20e-01 0.0916 0.142 0.9 intMono L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 8.93e-01 -0.0192 0.142 0.9 intMono L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 2.50e-01 -0.158 0.137 0.9 ncMono L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 4.03e-01 -0.122 0.146 0.9 ncMono L2
ENSG00000134644 PUM1 -224653 sc-eQTL 8.85e-01 0.0173 0.119 0.9 ncMono L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 4.05e-02 -0.221 0.107 0.9 ncMono L2
ENSG00000162512 SDC3 -67420 sc-eQTL 8.75e-01 0.0192 0.122 0.9 ncMono L2
ENSG00000162517 PEF1 -803558 sc-eQTL 2.81e-01 0.15 0.139 0.9 ncMono L2
ENSG00000168528 SERINC2 -568227 sc-eQTL 1.00e-01 0.218 0.132 0.9 ncMono L2
ENSG00000284543 LINC01226 -664888 sc-eQTL 7.41e-01 -0.0439 0.133 0.9 ncMono L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 1.39e-02 -0.336 0.135 0.9 ncMono L2
ENSG00000060688 SNRNP40 -455450 sc-eQTL 8.81e-02 0.269 0.157 0.907 pDC L2
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 5.38e-01 0.107 0.173 0.907 pDC L2
ENSG00000134644 PUM1 -224653 sc-eQTL 1.98e-01 -0.185 0.143 0.907 pDC L2
ENSG00000162511 LAPTM5 83564 sc-eQTL 1.46e-01 -0.194 0.133 0.907 pDC L2
ENSG00000162517 PEF1 -803558 sc-eQTL 7.97e-01 -0.0447 0.174 0.907 pDC L2
ENSG00000168528 SERINC2 -568227 sc-eQTL 3.34e-01 0.157 0.162 0.907 pDC L2
ENSG00000284543 LINC01226 -664888 sc-eQTL 6.27e-02 -0.233 0.125 0.907 pDC L2
ENSG00000287510 AL137857.1 109645 sc-eQTL 4.14e-01 0.121 0.148 0.907 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -455450 sc-eQTL 2.01e-01 0.202 0.157 0.904 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 9.05e-01 0.0158 0.132 0.904 B_Memory LOneK1K
ENSG00000134644 PUM1 -224653 sc-eQTL 2.50e-01 0.134 0.116 0.904 B_Memory LOneK1K
ENSG00000162510 MATN1 117753 sc-eQTL 6.50e-01 -0.0604 0.133 0.904 B_Memory LOneK1K
ENSG00000162511 LAPTM5 83564 sc-eQTL 6.62e-01 0.0366 0.0835 0.904 B_Memory LOneK1K
ENSG00000162517 PEF1 -803558 sc-eQTL 1.07e-01 -0.223 0.137 0.904 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 3.03e-01 0.114 0.11 0.904 B_Memory LOneK1K
ENSG00000287510 AL137857.1 109645 sc-eQTL 8.90e-01 -0.0167 0.12 0.904 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -455450 sc-eQTL 8.84e-01 0.0206 0.142 0.904 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 2.27e-01 -0.135 0.112 0.904 B_Naive LOneK1K
ENSG00000134644 PUM1 -224653 sc-eQTL 3.78e-01 0.0934 0.106 0.904 B_Naive LOneK1K
ENSG00000162510 MATN1 117753 sc-eQTL 4.79e-01 0.0722 0.102 0.904 B_Naive LOneK1K
ENSG00000162511 LAPTM5 83564 sc-eQTL 7.42e-01 -0.0237 0.0718 0.904 B_Naive LOneK1K
ENSG00000162517 PEF1 -803558 sc-eQTL 5.14e-01 0.0856 0.131 0.904 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 7.89e-01 -0.0248 0.0927 0.904 B_Naive LOneK1K
ENSG00000287510 AL137857.1 109645 sc-eQTL 4.27e-01 0.0875 0.11 0.904 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -455450 sc-eQTL 8.10e-01 0.0289 0.12 0.904 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 1.10e-01 -0.216 0.135 0.904 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -224653 sc-eQTL 2.68e-01 -0.0958 0.0862 0.904 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 83564 sc-eQTL 1.93e-01 -0.0988 0.0757 0.904 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -67420 sc-eQTL 6.99e-01 -0.0601 0.155 0.904 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -803558 sc-eQTL 4.29e-01 -0.0864 0.109 0.904 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -568227 sc-eQTL 4.82e-04 0.55 0.155 0.904 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -664888 sc-eQTL 4.68e-01 0.0951 0.131 0.904 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 109645 sc-eQTL 2.84e-01 -0.131 0.122 0.904 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -455450 sc-eQTL 9.06e-01 -0.0152 0.129 0.903 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 3.72e-01 -0.126 0.141 0.903 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -224653 sc-eQTL 5.45e-01 -0.0702 0.116 0.903 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 83564 sc-eQTL 4.91e-01 -0.0638 0.0926 0.903 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -67420 sc-eQTL 5.79e-01 -0.0753 0.135 0.903 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -803558 sc-eQTL 8.39e-01 -0.025 0.123 0.903 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -568227 sc-eQTL 9.74e-03 0.36 0.138 0.903 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -664888 sc-eQTL 8.51e-01 0.0251 0.133 0.903 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 109645 sc-eQTL 1.13e-01 -0.211 0.133 0.903 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -455450 sc-eQTL 3.41e-01 0.139 0.146 0.903 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -923555 sc-eQTL 9.23e-02 0.21 0.124 0.903 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -455644 sc-eQTL 5.08e-01 -0.0663 0.1 0.903 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -224653 sc-eQTL 4.36e-01 -0.0855 0.11 0.903 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 83564 sc-eQTL 8.37e-01 0.0253 0.123 0.903 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -803558 sc-eQTL 7.64e-01 -0.028 0.0931 0.903 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 122834 sc-eQTL 5.77e-01 0.079 0.141 0.903 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 109645 sc-eQTL 8.72e-01 -0.0197 0.122 0.903 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000168528 SERINC2 -568227 eQTL 0.00801 0.175 0.0657 0.0 0.0 0.0937
ENSG00000186056 MATN1-AS1 122834 eQTL 2.73e-02 -0.0474 0.0215 0.0 0.0 0.0937

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 MATN1-AS1 122834 3.18e-06 3.14e-06 2.32e-07 2.02e-06 4.74e-07 8.18e-07 2.03e-06 6.43e-07 1.89e-06 9.61e-07 2.61e-06 1.42e-06 3.66e-06 1.4e-06 8.73e-07 1.64e-06 1.17e-06 2.22e-06 7.68e-07 1.12e-06 1.14e-06 3.02e-06 2.61e-06 1.03e-06 4.05e-06 1.16e-06 1.19e-06 1.78e-06 2.1e-06 2.28e-06 2.01e-06 2.83e-07 4.59e-07 1.2e-06 1.51e-06 9.91e-07 8.07e-07 4.38e-07 1.09e-06 3.8e-07 1.98e-07 4.04e-06 4.86e-07 1.25e-07 3.48e-07 3.26e-07 4.15e-07 2.3e-07 2.83e-07
ENSG00000229447 \N -422343 4.89e-07 2.4e-07 6.45e-08 2.66e-07 1.02e-07 8.4e-08 3.11e-07 6.2e-08 1.98e-07 1.15e-07 2.62e-07 1.57e-07 3.18e-07 8.54e-08 7.98e-08 1.14e-07 6.17e-08 2.21e-07 7.53e-08 8.69e-08 1.33e-07 1.98e-07 2.04e-07 3.41e-08 3.7e-07 1.86e-07 1.31e-07 1.61e-07 1.48e-07 1.81e-07 1.52e-07 4.58e-08 4.27e-08 9.09e-08 1.31e-07 5.23e-08 5.71e-08 7.1e-08 4.82e-08 5.72e-08 4.67e-08 2.74e-07 4.17e-08 1.13e-08 3.71e-08 6.98e-09 7.52e-08 2.71e-09 4.83e-08