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Genes within 1Mb (chr1:30836870:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -459918 sc-eQTL 8.41e-01 -0.0149 0.0744 0.566 B L1
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 2.59e-01 -0.0673 0.0594 0.566 B L1
ENSG00000134644 PUM1 -229121 sc-eQTL 1.85e-01 0.0662 0.0498 0.566 B L1
ENSG00000162510 MATN1 113285 sc-eQTL 9.87e-01 0.000881 0.0526 0.566 B L1
ENSG00000162511 LAPTM5 79096 sc-eQTL 1.69e-01 0.0566 0.041 0.566 B L1
ENSG00000162517 PEF1 -808026 sc-eQTL 1.68e-01 0.0856 0.0618 0.566 B L1
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 2.51e-01 0.0554 0.0481 0.566 B L1
ENSG00000287510 AL137857.1 105177 sc-eQTL 4.83e-02 0.112 0.0566 0.566 B L1
ENSG00000060688 SNRNP40 -459918 sc-eQTL 4.75e-01 0.046 0.0643 0.566 CD4T L1
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 2.47e-01 -0.0582 0.0501 0.566 CD4T L1
ENSG00000134644 PUM1 -229121 sc-eQTL 9.55e-01 0.00254 0.0448 0.566 CD4T L1
ENSG00000162511 LAPTM5 79096 sc-eQTL 1.08e-01 0.0796 0.0493 0.566 CD4T L1
ENSG00000162517 PEF1 -808026 sc-eQTL 2.83e-01 0.0557 0.0517 0.566 CD4T L1
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 4.85e-01 0.031 0.0443 0.566 CD4T L1
ENSG00000287510 AL137857.1 105177 sc-eQTL 5.02e-01 0.0357 0.0531 0.566 CD4T L1
ENSG00000060688 SNRNP40 -459918 sc-eQTL 9.32e-01 -0.00733 0.0854 0.566 CD8T L1
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 1.60e-01 -0.0798 0.0565 0.566 CD8T L1
ENSG00000134644 PUM1 -229121 sc-eQTL 9.18e-01 0.00514 0.05 0.566 CD8T L1
ENSG00000162511 LAPTM5 79096 sc-eQTL 7.97e-01 0.0125 0.0486 0.566 CD8T L1
ENSG00000162517 PEF1 -808026 sc-eQTL 8.32e-01 0.0127 0.0598 0.566 CD8T L1
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 3.89e-02 0.117 0.0564 0.566 CD8T L1
ENSG00000287510 AL137857.1 105177 sc-eQTL 7.66e-01 0.0213 0.0715 0.566 CD8T L1
ENSG00000060688 SNRNP40 -459918 sc-eQTL 8.33e-01 -0.0166 0.0784 0.577 DC L1
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 8.52e-02 -0.159 0.0922 0.577 DC L1
ENSG00000134644 PUM1 -229121 sc-eQTL 7.15e-01 -0.0266 0.0727 0.577 DC L1
ENSG00000162511 LAPTM5 79096 sc-eQTL 2.59e-01 -0.0586 0.0518 0.577 DC L1
ENSG00000162517 PEF1 -808026 sc-eQTL 8.56e-01 -0.0153 0.0842 0.577 DC L1
ENSG00000168528 SERINC2 -572695 sc-eQTL 3.22e-01 0.0848 0.0854 0.577 DC L1
ENSG00000284543 LINC01226 -669356 sc-eQTL 9.32e-01 -0.00488 0.0567 0.577 DC L1
ENSG00000287510 AL137857.1 105177 sc-eQTL 1.95e-02 0.191 0.081 0.577 DC L1
ENSG00000060688 SNRNP40 -459918 sc-eQTL 7.61e-01 -0.0183 0.06 0.566 Mono L1
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 7.19e-03 -0.199 0.0732 0.566 Mono L1
ENSG00000134644 PUM1 -229121 sc-eQTL 9.18e-02 0.0803 0.0474 0.566 Mono L1
ENSG00000162511 LAPTM5 79096 sc-eQTL 7.40e-01 0.0146 0.0439 0.566 Mono L1
ENSG00000162512 SDC3 -71888 sc-eQTL 7.82e-01 -0.0234 0.0843 0.566 Mono L1
ENSG00000162517 PEF1 -808026 sc-eQTL 9.11e-02 -0.0998 0.0588 0.566 Mono L1
ENSG00000168528 SERINC2 -572695 sc-eQTL 7.20e-02 0.162 0.0898 0.566 Mono L1
ENSG00000284543 LINC01226 -669356 sc-eQTL 6.33e-01 -0.0381 0.0797 0.566 Mono L1
ENSG00000287510 AL137857.1 105177 sc-eQTL 1.27e-01 0.106 0.0693 0.566 Mono L1
ENSG00000060688 SNRNP40 -459918 sc-eQTL 2.15e-01 0.1 0.0807 0.567 NK L1
ENSG00000121753 ADGRB2 -928023 sc-eQTL 5.77e-01 0.039 0.0697 0.567 NK L1
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 3.75e-01 -0.0492 0.0553 0.567 NK L1
ENSG00000134644 PUM1 -229121 sc-eQTL 7.55e-01 0.0182 0.0581 0.567 NK L1
ENSG00000162511 LAPTM5 79096 sc-eQTL 9.02e-01 0.00824 0.0669 0.567 NK L1
ENSG00000162517 PEF1 -808026 sc-eQTL 4.28e-01 0.0388 0.0488 0.567 NK L1
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 1.43e-01 0.11 0.0748 0.567 NK L1
ENSG00000287510 AL137857.1 105177 sc-eQTL 5.14e-01 0.0454 0.0694 0.567 NK L1
ENSG00000060688 SNRNP40 -459918 sc-eQTL 1.88e-01 0.0816 0.0617 0.566 Other_T L1
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 1.09e-01 -0.106 0.0658 0.566 Other_T L1
ENSG00000134644 PUM1 -229121 sc-eQTL 7.55e-01 0.0186 0.0595 0.566 Other_T L1
ENSG00000162511 LAPTM5 79096 sc-eQTL 4.55e-01 0.0365 0.0487 0.566 Other_T L1
ENSG00000162517 PEF1 -808026 sc-eQTL 3.30e-01 -0.0634 0.065 0.566 Other_T L1
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 6.31e-01 0.0384 0.0799 0.566 Other_T L1
ENSG00000287510 AL137857.1 105177 sc-eQTL 5.45e-01 0.0505 0.0832 0.566 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -459918 sc-eQTL 8.81e-01 0.0152 0.101 0.587 B_Activated L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 9.71e-01 0.00367 0.102 0.587 B_Activated L2
ENSG00000134644 PUM1 -229121 sc-eQTL 3.04e-01 0.0974 0.0944 0.587 B_Activated L2
ENSG00000162510 MATN1 113285 sc-eQTL 2.56e-01 0.0941 0.0824 0.587 B_Activated L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 7.39e-02 0.103 0.0572 0.587 B_Activated L2
ENSG00000162517 PEF1 -808026 sc-eQTL 8.13e-01 -0.0232 0.0982 0.587 B_Activated L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 2.30e-01 -0.112 0.0928 0.587 B_Activated L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 5.66e-01 0.0474 0.0824 0.587 B_Activated L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 5.58e-01 0.055 0.0939 0.564 B_Intermediate L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 2.18e-01 -0.0964 0.078 0.564 B_Intermediate L2
ENSG00000134644 PUM1 -229121 sc-eQTL 4.89e-01 0.0511 0.0738 0.564 B_Intermediate L2
ENSG00000162510 MATN1 113285 sc-eQTL 1.19e-01 -0.12 0.0764 0.564 B_Intermediate L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 9.35e-02 0.079 0.0469 0.564 B_Intermediate L2
ENSG00000162517 PEF1 -808026 sc-eQTL 3.00e-01 0.0908 0.0874 0.564 B_Intermediate L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 6.77e-01 -0.0276 0.0662 0.564 B_Intermediate L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 4.87e-02 0.146 0.0734 0.564 B_Intermediate L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 8.91e-01 0.0126 0.0917 0.571 B_Memory L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 9.51e-01 -0.00516 0.0845 0.571 B_Memory L2
ENSG00000134644 PUM1 -229121 sc-eQTL 1.54e-01 -0.105 0.0732 0.571 B_Memory L2
ENSG00000162510 MATN1 113285 sc-eQTL 2.31e-01 0.0843 0.0701 0.571 B_Memory L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 1.20e-01 0.0968 0.062 0.571 B_Memory L2
ENSG00000162517 PEF1 -808026 sc-eQTL 8.41e-01 0.0167 0.0832 0.571 B_Memory L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 2.62e-01 0.08 0.0711 0.571 B_Memory L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 7.34e-01 0.0284 0.0835 0.571 B_Memory L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 3.53e-01 -0.0767 0.0823 0.566 B_Naive1 L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 3.15e-01 -0.0716 0.0711 0.566 B_Naive1 L2
ENSG00000134644 PUM1 -229121 sc-eQTL 2.50e-01 0.0723 0.0626 0.566 B_Naive1 L2
ENSG00000162510 MATN1 113285 sc-eQTL 7.01e-01 0.0245 0.0637 0.566 B_Naive1 L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 9.85e-02 0.0702 0.0423 0.566 B_Naive1 L2
ENSG00000162517 PEF1 -808026 sc-eQTL 8.02e-01 0.0188 0.0751 0.566 B_Naive1 L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 3.00e-01 0.0579 0.0558 0.566 B_Naive1 L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 1.88e-01 0.0908 0.0688 0.566 B_Naive1 L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 6.30e-01 0.0423 0.0877 0.569 B_Naive2 L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 6.03e-01 -0.0377 0.0724 0.569 B_Naive2 L2
ENSG00000134644 PUM1 -229121 sc-eQTL 7.70e-01 -0.0207 0.0709 0.569 B_Naive2 L2
ENSG00000162510 MATN1 113285 sc-eQTL 6.46e-01 0.0313 0.068 0.569 B_Naive2 L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 1.59e-01 0.0651 0.046 0.569 B_Naive2 L2
ENSG00000162517 PEF1 -808026 sc-eQTL 5.85e-01 0.0459 0.084 0.569 B_Naive2 L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 2.82e-01 0.0724 0.0671 0.569 B_Naive2 L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 1.11e-02 0.183 0.0716 0.569 B_Naive2 L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 6.75e-01 -0.0363 0.0867 0.57 CD4_CTL L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 7.15e-01 -0.0312 0.0852 0.57 CD4_CTL L2
ENSG00000134644 PUM1 -229121 sc-eQTL 7.00e-01 -0.0323 0.0836 0.57 CD4_CTL L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 2.05e-01 0.0943 0.0742 0.57 CD4_CTL L2
ENSG00000162517 PEF1 -808026 sc-eQTL 4.32e-01 0.0601 0.0763 0.57 CD4_CTL L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 3.76e-01 0.0722 0.0814 0.57 CD4_CTL L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 2.88e-01 -0.0764 0.0718 0.57 CD4_CTL L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 3.33e-01 0.0651 0.0672 0.566 CD4_Naive L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 6.63e-02 -0.109 0.0592 0.566 CD4_Naive L2
ENSG00000134644 PUM1 -229121 sc-eQTL 5.76e-01 0.0266 0.0476 0.566 CD4_Naive L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 1.06e-01 0.0823 0.0507 0.566 CD4_Naive L2
ENSG00000162517 PEF1 -808026 sc-eQTL 6.44e-01 0.0259 0.056 0.566 CD4_Naive L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 8.14e-01 -0.0122 0.0518 0.566 CD4_Naive L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 1.60e-01 0.0834 0.0592 0.566 CD4_Naive L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 9.61e-02 -0.141 0.0845 0.566 CD4_TCM L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 3.97e-01 0.0581 0.0685 0.566 CD4_TCM L2
ENSG00000134644 PUM1 -229121 sc-eQTL 8.13e-01 0.0144 0.0607 0.566 CD4_TCM L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 2.85e-01 0.0538 0.0502 0.566 CD4_TCM L2
ENSG00000162517 PEF1 -808026 sc-eQTL 4.88e-01 0.0469 0.0674 0.566 CD4_TCM L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 4.25e-01 0.051 0.0638 0.566 CD4_TCM L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 4.64e-01 0.0522 0.0711 0.566 CD4_TCM L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 4.94e-01 0.0582 0.0849 0.566 CD4_TEM L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 9.90e-01 -0.00106 0.081 0.566 CD4_TEM L2
ENSG00000134644 PUM1 -229121 sc-eQTL 2.06e-01 -0.0852 0.0672 0.566 CD4_TEM L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 3.42e-01 0.0648 0.0681 0.566 CD4_TEM L2
ENSG00000162517 PEF1 -808026 sc-eQTL 8.21e-01 0.0174 0.0764 0.566 CD4_TEM L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 5.03e-01 0.0535 0.0798 0.566 CD4_TEM L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 6.97e-01 0.0307 0.0787 0.566 CD4_TEM L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 6.66e-01 0.0398 0.0921 0.566 CD8_CTL L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 2.34e-02 -0.159 0.0698 0.566 CD8_CTL L2
ENSG00000134644 PUM1 -229121 sc-eQTL 3.06e-01 0.0702 0.0684 0.566 CD8_CTL L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 1.28e-01 -0.115 0.0755 0.566 CD8_CTL L2
ENSG00000162517 PEF1 -808026 sc-eQTL 6.03e-01 -0.0344 0.0661 0.566 CD8_CTL L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 5.68e-01 0.0457 0.0798 0.566 CD8_CTL L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 9.91e-01 -0.000865 0.0751 0.566 CD8_CTL L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 7.69e-01 0.0253 0.086 0.566 CD8_Naive L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 5.21e-01 -0.0476 0.0741 0.566 CD8_Naive L2
ENSG00000134644 PUM1 -229121 sc-eQTL 5.69e-01 0.034 0.0596 0.566 CD8_Naive L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 1.72e-01 0.078 0.0569 0.566 CD8_Naive L2
ENSG00000162517 PEF1 -808026 sc-eQTL 3.89e-01 -0.0686 0.0794 0.566 CD8_Naive L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 2.92e-01 0.0753 0.0712 0.566 CD8_Naive L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 6.23e-01 -0.0383 0.0777 0.566 CD8_Naive L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 7.25e-01 0.034 0.0966 0.565 CD8_TCM L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 8.63e-01 -0.0153 0.0885 0.565 CD8_TCM L2
ENSG00000134644 PUM1 -229121 sc-eQTL 6.23e-01 -0.0409 0.0832 0.565 CD8_TCM L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 5.81e-01 -0.0481 0.0871 0.565 CD8_TCM L2
ENSG00000162517 PEF1 -808026 sc-eQTL 2.08e-01 0.112 0.0887 0.565 CD8_TCM L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 1.68e-01 0.111 0.0803 0.565 CD8_TCM L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 5.68e-01 0.0466 0.0814 0.565 CD8_TCM L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 5.35e-01 -0.0564 0.0907 0.578 CD8_TEM L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 3.48e-01 -0.0817 0.0868 0.578 CD8_TEM L2
ENSG00000134644 PUM1 -229121 sc-eQTL 4.00e-01 0.0749 0.0888 0.578 CD8_TEM L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 6.86e-01 0.0338 0.0836 0.578 CD8_TEM L2
ENSG00000162517 PEF1 -808026 sc-eQTL 6.46e-01 0.0362 0.0787 0.578 CD8_TEM L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 2.64e-01 -0.0968 0.0865 0.578 CD8_TEM L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 2.13e-01 0.0977 0.0782 0.578 CD8_TEM L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 2.30e-01 0.108 0.0901 0.574 MAIT L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 1.45e-03 -0.252 0.0781 0.574 MAIT L2
ENSG00000134644 PUM1 -229121 sc-eQTL 3.27e-01 0.0752 0.0766 0.574 MAIT L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 5.87e-01 -0.0393 0.0724 0.574 MAIT L2
ENSG00000162517 PEF1 -808026 sc-eQTL 1.00e-01 -0.131 0.0791 0.574 MAIT L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 3.58e-01 0.0741 0.0805 0.574 MAIT L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 7.36e-01 -0.0281 0.0831 0.574 MAIT L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 9.11e-01 0.0104 0.0923 0.567 NK_CD56bright L2
ENSG00000121753 ADGRB2 -928023 sc-eQTL 7.21e-01 -0.0258 0.0722 0.567 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 8.94e-01 -0.0104 0.078 0.567 NK_CD56bright L2
ENSG00000134644 PUM1 -229121 sc-eQTL 1.48e-01 -0.118 0.0815 0.567 NK_CD56bright L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 5.24e-01 -0.0514 0.0807 0.567 NK_CD56bright L2
ENSG00000162517 PEF1 -808026 sc-eQTL 3.43e-02 0.165 0.0776 0.567 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 5.35e-01 0.0504 0.0811 0.567 NK_CD56bright L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 2.39e-01 0.0941 0.0797 0.567 NK_CD56bright L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 3.59e-01 0.0783 0.0853 0.567 NK_CD56dim L2
ENSG00000121753 ADGRB2 -928023 sc-eQTL 4.08e-01 0.0622 0.075 0.567 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 2.68e-01 -0.07 0.063 0.567 NK_CD56dim L2
ENSG00000134644 PUM1 -229121 sc-eQTL 7.12e-01 0.024 0.0648 0.567 NK_CD56dim L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 6.76e-01 0.0289 0.0691 0.567 NK_CD56dim L2
ENSG00000162517 PEF1 -808026 sc-eQTL 1.69e-01 0.0844 0.0612 0.567 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 7.34e-01 0.0295 0.0866 0.567 NK_CD56dim L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 2.41e-01 0.0838 0.0712 0.567 NK_CD56dim L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 5.50e-01 0.0544 0.0908 0.564 NK_HLA L2
ENSG00000121753 ADGRB2 -928023 sc-eQTL 7.31e-01 0.0248 0.0722 0.564 NK_HLA L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 6.94e-01 0.032 0.0812 0.564 NK_HLA L2
ENSG00000134644 PUM1 -229121 sc-eQTL 6.42e-01 0.0368 0.0791 0.564 NK_HLA L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 9.95e-01 -0.000493 0.0755 0.564 NK_HLA L2
ENSG00000162517 PEF1 -808026 sc-eQTL 2.18e-01 0.105 0.0847 0.564 NK_HLA L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 5.49e-01 -0.0482 0.0803 0.564 NK_HLA L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 5.69e-01 0.0442 0.0776 0.564 NK_HLA L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 6.07e-01 0.043 0.0835 0.567 NK_cytokine L2
ENSG00000121753 ADGRB2 -928023 sc-eQTL 8.37e-01 0.0155 0.0755 0.567 NK_cytokine L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 8.40e-01 0.0131 0.0652 0.567 NK_cytokine L2
ENSG00000134644 PUM1 -229121 sc-eQTL 2.97e-01 -0.0736 0.0704 0.567 NK_cytokine L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 9.35e-01 -0.00636 0.0777 0.567 NK_cytokine L2
ENSG00000162517 PEF1 -808026 sc-eQTL 9.36e-01 -0.00533 0.0662 0.567 NK_cytokine L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 1.38e-01 0.122 0.0819 0.567 NK_cytokine L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 8.97e-01 -0.0099 0.0766 0.567 NK_cytokine L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 3.19e-01 -0.0987 0.0987 0.559 PB L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 5.38e-01 -0.0709 0.115 0.559 PB L2
ENSG00000134644 PUM1 -229121 sc-eQTL 7.76e-01 0.0285 0.0998 0.559 PB L2
ENSG00000162510 MATN1 113285 sc-eQTL 5.62e-01 -0.0541 0.093 0.559 PB L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 9.53e-01 -0.00393 0.0665 0.559 PB L2
ENSG00000162517 PEF1 -808026 sc-eQTL 5.33e-01 -0.064 0.102 0.559 PB L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 1.34e-01 -0.136 0.0901 0.559 PB L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 2.67e-02 0.213 0.0948 0.559 PB L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 1.02e-01 -0.108 0.0657 0.565 Pro_T L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 3.92e-01 0.0719 0.0838 0.565 Pro_T L2
ENSG00000134644 PUM1 -229121 sc-eQTL 3.16e-01 -0.0784 0.0781 0.565 Pro_T L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 3.93e-01 0.048 0.056 0.565 Pro_T L2
ENSG00000162517 PEF1 -808026 sc-eQTL 4.99e-01 -0.0558 0.0823 0.565 Pro_T L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 8.94e-01 0.0105 0.0785 0.565 Pro_T L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 2.39e-02 0.162 0.0713 0.565 Pro_T L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 1.69e-01 0.122 0.0884 0.566 Treg L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 6.90e-01 0.0343 0.0859 0.566 Treg L2
ENSG00000134644 PUM1 -229121 sc-eQTL 8.37e-01 -0.0141 0.0688 0.566 Treg L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 2.81e-01 0.0849 0.0785 0.566 Treg L2
ENSG00000162517 PEF1 -808026 sc-eQTL 7.11e-01 0.0315 0.085 0.566 Treg L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 3.48e-01 0.0754 0.0801 0.566 Treg L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 5.45e-01 0.0485 0.0801 0.566 Treg L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 4.59e-01 -0.0691 0.0931 0.578 cDC L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 7.00e-01 -0.0389 0.101 0.578 cDC L2
ENSG00000134644 PUM1 -229121 sc-eQTL 7.28e-01 0.0302 0.0867 0.578 cDC L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 3.07e-01 0.062 0.0606 0.578 cDC L2
ENSG00000162517 PEF1 -808026 sc-eQTL 4.69e-01 0.0638 0.0879 0.578 cDC L2
ENSG00000168528 SERINC2 -572695 sc-eQTL 1.89e-01 0.102 0.0776 0.578 cDC L2
ENSG00000284543 LINC01226 -669356 sc-eQTL 8.10e-02 -0.133 0.076 0.578 cDC L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 2.75e-01 0.09 0.0822 0.578 cDC L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 5.68e-01 -0.0408 0.0714 0.566 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 5.08e-01 -0.0527 0.0796 0.566 cMono_IL1B L2
ENSG00000134644 PUM1 -229121 sc-eQTL 1.26e-01 0.0823 0.0536 0.566 cMono_IL1B L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 5.43e-01 -0.0288 0.0473 0.566 cMono_IL1B L2
ENSG00000162512 SDC3 -71888 sc-eQTL 4.14e-01 -0.0729 0.089 0.566 cMono_IL1B L2
ENSG00000162517 PEF1 -808026 sc-eQTL 7.70e-01 0.0213 0.0728 0.566 cMono_IL1B L2
ENSG00000168528 SERINC2 -572695 sc-eQTL 5.29e-02 0.174 0.0895 0.566 cMono_IL1B L2
ENSG00000284543 LINC01226 -669356 sc-eQTL 9.90e-01 -0.000974 0.0798 0.566 cMono_IL1B L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 5.71e-01 0.0422 0.0744 0.566 cMono_IL1B L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 7.63e-01 0.0228 0.0755 0.566 cMono_S100A L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 5.46e-03 -0.246 0.0876 0.566 cMono_S100A L2
ENSG00000134644 PUM1 -229121 sc-eQTL 5.10e-02 0.125 0.0639 0.566 cMono_S100A L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 5.66e-01 0.0284 0.0495 0.566 cMono_S100A L2
ENSG00000162512 SDC3 -71888 sc-eQTL 7.28e-01 0.0298 0.0855 0.566 cMono_S100A L2
ENSG00000162517 PEF1 -808026 sc-eQTL 1.35e-01 -0.115 0.0769 0.566 cMono_S100A L2
ENSG00000168528 SERINC2 -572695 sc-eQTL 1.78e-02 0.213 0.0894 0.566 cMono_S100A L2
ENSG00000284543 LINC01226 -669356 sc-eQTL 7.97e-01 -0.019 0.0736 0.566 cMono_S100A L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 5.56e-01 0.0436 0.0738 0.566 cMono_S100A L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 2.09e-01 0.14 0.111 0.561 gdT L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 5.68e-01 0.0548 0.0958 0.561 gdT L2
ENSG00000134644 PUM1 -229121 sc-eQTL 9.06e-01 -0.0117 0.0989 0.561 gdT L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 1.39e-02 0.262 0.105 0.561 gdT L2
ENSG00000162517 PEF1 -808026 sc-eQTL 6.07e-01 -0.0507 0.0982 0.561 gdT L2
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 2.79e-01 -0.107 0.0988 0.561 gdT L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 8.31e-01 -0.0206 0.0961 0.561 gdT L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 4.99e-01 0.057 0.0841 0.564 intMono L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 2.59e-01 -0.102 0.0902 0.564 intMono L2
ENSG00000134644 PUM1 -229121 sc-eQTL 7.13e-01 -0.0283 0.0767 0.564 intMono L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 5.63e-01 0.0348 0.0602 0.564 intMono L2
ENSG00000162512 SDC3 -71888 sc-eQTL 2.58e-01 -0.0932 0.0822 0.564 intMono L2
ENSG00000162517 PEF1 -808026 sc-eQTL 7.84e-01 -0.0238 0.0866 0.564 intMono L2
ENSG00000168528 SERINC2 -572695 sc-eQTL 7.37e-02 0.154 0.0856 0.564 intMono L2
ENSG00000284543 LINC01226 -669356 sc-eQTL 3.89e-01 -0.0705 0.0817 0.564 intMono L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 2.88e-01 0.0869 0.0816 0.564 intMono L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 4.61e-01 -0.0579 0.0784 0.572 ncMono L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 6.38e-01 -0.0395 0.0837 0.572 ncMono L2
ENSG00000134644 PUM1 -229121 sc-eQTL 4.98e-01 0.0464 0.0683 0.572 ncMono L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 4.74e-01 -0.0445 0.0621 0.572 ncMono L2
ENSG00000162512 SDC3 -71888 sc-eQTL 6.62e-01 0.0305 0.0696 0.572 ncMono L2
ENSG00000162517 PEF1 -808026 sc-eQTL 6.52e-01 -0.0361 0.0799 0.572 ncMono L2
ENSG00000168528 SERINC2 -572695 sc-eQTL 4.12e-01 0.0625 0.0759 0.572 ncMono L2
ENSG00000284543 LINC01226 -669356 sc-eQTL 1.86e-01 0.1 0.0756 0.572 ncMono L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 5.66e-02 0.15 0.078 0.572 ncMono L2
ENSG00000060688 SNRNP40 -459918 sc-eQTL 8.52e-01 -0.0177 0.0944 0.582 pDC L2
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 2.61e-02 -0.229 0.102 0.582 pDC L2
ENSG00000134644 PUM1 -229121 sc-eQTL 5.82e-01 -0.0474 0.0858 0.582 pDC L2
ENSG00000162511 LAPTM5 79096 sc-eQTL 8.92e-02 -0.135 0.0791 0.582 pDC L2
ENSG00000162517 PEF1 -808026 sc-eQTL 3.43e-01 -0.0983 0.103 0.582 pDC L2
ENSG00000168528 SERINC2 -572695 sc-eQTL 8.79e-01 -0.0148 0.0968 0.582 pDC L2
ENSG00000284543 LINC01226 -669356 sc-eQTL 5.20e-01 -0.0484 0.0751 0.582 pDC L2
ENSG00000287510 AL137857.1 105177 sc-eQTL 8.15e-01 0.0207 0.0884 0.582 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -459918 sc-eQTL 4.01e-01 0.0745 0.0884 0.566 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 6.25e-01 -0.0361 0.0737 0.566 B_Memory LOneK1K
ENSG00000134644 PUM1 -229121 sc-eQTL 8.59e-01 0.0116 0.0653 0.566 B_Memory LOneK1K
ENSG00000162510 MATN1 113285 sc-eQTL 5.41e-01 -0.0456 0.0744 0.566 B_Memory LOneK1K
ENSG00000162511 LAPTM5 79096 sc-eQTL 2.86e-02 0.102 0.0463 0.566 B_Memory LOneK1K
ENSG00000162517 PEF1 -808026 sc-eQTL 3.88e-01 0.067 0.0774 0.566 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 9.79e-01 0.00166 0.0619 0.566 B_Memory LOneK1K
ENSG00000287510 AL137857.1 105177 sc-eQTL 2.21e-01 0.0825 0.0672 0.566 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -459918 sc-eQTL 9.18e-01 -0.00829 0.0801 0.566 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 2.71e-01 -0.0697 0.0631 0.566 B_Naive LOneK1K
ENSG00000134644 PUM1 -229121 sc-eQTL 2.27e-01 0.0724 0.0597 0.566 B_Naive LOneK1K
ENSG00000162510 MATN1 113285 sc-eQTL 6.06e-01 0.0297 0.0576 0.566 B_Naive LOneK1K
ENSG00000162511 LAPTM5 79096 sc-eQTL 1.67e-01 0.056 0.0404 0.566 B_Naive LOneK1K
ENSG00000162517 PEF1 -808026 sc-eQTL 5.82e-01 0.0408 0.0741 0.566 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 1.31e-01 0.079 0.0521 0.566 B_Naive LOneK1K
ENSG00000287510 AL137857.1 105177 sc-eQTL 3.52e-02 0.131 0.0616 0.566 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -459918 sc-eQTL 6.02e-01 -0.0359 0.0687 0.566 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 2.57e-02 -0.173 0.0769 0.566 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -229121 sc-eQTL 4.97e-02 0.0971 0.0492 0.566 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 79096 sc-eQTL 7.03e-01 0.0167 0.0436 0.566 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -71888 sc-eQTL 9.72e-01 0.00314 0.089 0.566 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -808026 sc-eQTL 3.29e-01 -0.0611 0.0625 0.566 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -572695 sc-eQTL 5.09e-02 0.178 0.0908 0.566 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -669356 sc-eQTL 6.75e-01 -0.0315 0.0751 0.566 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 105177 sc-eQTL 4.16e-01 0.0572 0.0702 0.566 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -459918 sc-eQTL 9.71e-01 -0.00267 0.0744 0.567 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 6.95e-02 -0.147 0.0808 0.567 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -229121 sc-eQTL 5.45e-01 0.0404 0.0667 0.567 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 79096 sc-eQTL 6.63e-01 0.0233 0.0534 0.567 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -71888 sc-eQTL 3.52e-01 -0.0726 0.0778 0.567 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -808026 sc-eQTL 5.20e-01 -0.0456 0.0708 0.567 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -572695 sc-eQTL 9.20e-02 0.136 0.0803 0.567 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -669356 sc-eQTL 4.41e-01 -0.0592 0.0766 0.567 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 105177 sc-eQTL 5.27e-02 0.148 0.0762 0.567 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -459918 sc-eQTL 2.12e-01 0.101 0.081 0.567 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -928023 sc-eQTL 4.88e-01 0.048 0.0692 0.567 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -460112 sc-eQTL 3.62e-01 -0.0507 0.0554 0.567 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -229121 sc-eQTL 7.18e-01 0.022 0.0608 0.567 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 79096 sc-eQTL 8.29e-01 0.0147 0.068 0.567 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -808026 sc-eQTL 5.44e-01 0.0314 0.0516 0.567 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 118366 sc-eQTL 2.36e-01 0.093 0.0782 0.567 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 105177 sc-eQTL 3.94e-01 0.0577 0.0676 0.567 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -460112 eQTL 8.33e-03 0.0471 0.0178 0.0 0.0 0.405
ENSG00000162511 LAPTM5 79096 eQTL 0.00394 -0.0289 0.01 0.0 0.0 0.405
ENSG00000168528 SERINC2 -572695 eQTL 0.0251 0.0869 0.0387 0.0 0.0 0.405

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 ZCCHC17 -460112 1.73e-06 3.17e-06 6.94e-07 1.7e-06 6.1e-07 8.11e-07 3.07e-06 4.05e-07 1.78e-06 7.34e-07 2.46e-06 1.26e-06 3.42e-06 7.47e-07 5.68e-07 1.16e-06 1.23e-06 2.17e-06 1.27e-06 1.13e-06 1.4e-06 2.87e-06 3.63e-06 1.22e-06 3.42e-06 1.23e-06 1.1e-06 1.05e-06 4.08e-06 1.84e-06 8.36e-07 2.81e-07 3.25e-07 5.83e-07 5.31e-07 8.84e-07 8.71e-07 3.25e-07 5.11e-07 3.46e-07 2.86e-07 3.38e-06 5.97e-07 1.33e-07 3.3e-07 3.32e-07 2.28e-07 8.57e-08 1.92e-07
ENSG00000168528 SERINC2 -572695 1.23e-06 1.95e-06 2.31e-07 1.32e-06 4.9e-07 6.06e-07 1.61e-06 3.44e-07 1.41e-06 6.29e-07 2.04e-06 6.6e-07 2.51e-06 3.03e-07 5.36e-07 9.2e-07 1.11e-06 1.08e-06 1.22e-06 4.4e-07 6.57e-07 1.93e-06 2.28e-06 8.04e-07 2.41e-06 7.59e-07 9.15e-07 7.19e-07 1.87e-06 1.34e-06 7.26e-07 1.82e-07 2e-07 6.99e-07 3.96e-07 5.31e-07 6.6e-07 1.26e-07 2.9e-07 2.58e-07 1.22e-07 2.12e-06 2.9e-07 7.3e-08 2.78e-07 1.2e-07 2.09e-07 1.2e-08 2.41e-07