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Genes within 1Mb (chr1:30831778:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -465010 sc-eQTL 4.24e-01 -0.0625 0.0781 0.387 B L1
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 2.73e-01 -0.0687 0.0624 0.387 B L1
ENSG00000134644 PUM1 -234213 sc-eQTL 8.06e-01 -0.0129 0.0525 0.387 B L1
ENSG00000162510 MATN1 108193 sc-eQTL 8.19e-01 0.0126 0.0552 0.387 B L1
ENSG00000162511 LAPTM5 74004 sc-eQTL 7.40e-01 0.0144 0.0432 0.387 B L1
ENSG00000162517 PEF1 -813118 sc-eQTL 6.97e-01 -0.0254 0.0652 0.387 B L1
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 2.97e-01 0.0529 0.0505 0.387 B L1
ENSG00000287510 AL137857.1 100085 sc-eQTL 2.80e-01 0.0647 0.0598 0.387 B L1
ENSG00000060688 SNRNP40 -465010 sc-eQTL 8.09e-01 0.0164 0.0677 0.387 CD4T L1
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 6.42e-01 -0.0247 0.0529 0.387 CD4T L1
ENSG00000134644 PUM1 -234213 sc-eQTL 5.68e-01 -0.0269 0.0471 0.387 CD4T L1
ENSG00000162511 LAPTM5 74004 sc-eQTL 3.22e-01 0.0517 0.0521 0.387 CD4T L1
ENSG00000162517 PEF1 -813118 sc-eQTL 8.44e-01 0.0108 0.0546 0.387 CD4T L1
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 9.69e-01 0.00183 0.0467 0.387 CD4T L1
ENSG00000287510 AL137857.1 100085 sc-eQTL 7.67e-01 0.0166 0.0559 0.387 CD4T L1
ENSG00000060688 SNRNP40 -465010 sc-eQTL 4.07e-01 -0.0749 0.0902 0.387 CD8T L1
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 5.54e-01 -0.0356 0.0601 0.387 CD8T L1
ENSG00000134644 PUM1 -234213 sc-eQTL 5.45e-01 0.0321 0.0529 0.387 CD8T L1
ENSG00000162511 LAPTM5 74004 sc-eQTL 1.89e-01 0.0675 0.0512 0.387 CD8T L1
ENSG00000162517 PEF1 -813118 sc-eQTL 9.98e-01 0.000195 0.0633 0.387 CD8T L1
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 3.59e-01 0.0553 0.0601 0.387 CD8T L1
ENSG00000287510 AL137857.1 100085 sc-eQTL 6.47e-01 -0.0347 0.0757 0.387 CD8T L1
ENSG00000060688 SNRNP40 -465010 sc-eQTL 9.15e-01 0.00863 0.0811 0.394 DC L1
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 3.07e-02 -0.207 0.0949 0.394 DC L1
ENSG00000134644 PUM1 -234213 sc-eQTL 4.54e-01 -0.0563 0.0751 0.394 DC L1
ENSG00000162511 LAPTM5 74004 sc-eQTL 6.29e-01 -0.026 0.0537 0.394 DC L1
ENSG00000162517 PEF1 -813118 sc-eQTL 2.33e-01 0.104 0.0868 0.394 DC L1
ENSG00000168528 SERINC2 -577787 sc-eQTL 3.41e-01 0.0844 0.0884 0.394 DC L1
ENSG00000284543 LINC01226 -674448 sc-eQTL 4.15e-01 0.0479 0.0586 0.394 DC L1
ENSG00000287510 AL137857.1 100085 sc-eQTL 8.54e-04 0.28 0.0826 0.394 DC L1
ENSG00000060688 SNRNP40 -465010 sc-eQTL 5.40e-01 -0.038 0.0619 0.387 Mono L1
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 3.95e-02 -0.158 0.0761 0.387 Mono L1
ENSG00000134644 PUM1 -234213 sc-eQTL 9.59e-01 -0.00252 0.0493 0.387 Mono L1
ENSG00000162511 LAPTM5 74004 sc-eQTL 9.03e-01 -0.00556 0.0453 0.387 Mono L1
ENSG00000162512 SDC3 -76980 sc-eQTL 4.34e-01 -0.0682 0.087 0.387 Mono L1
ENSG00000162517 PEF1 -813118 sc-eQTL 7.43e-04 -0.204 0.0595 0.387 Mono L1
ENSG00000168528 SERINC2 -577787 sc-eQTL 3.90e-01 0.0803 0.0933 0.387 Mono L1
ENSG00000284543 LINC01226 -674448 sc-eQTL 6.25e-01 -0.0403 0.0823 0.387 Mono L1
ENSG00000287510 AL137857.1 100085 sc-eQTL 6.25e-01 0.0352 0.0719 0.387 Mono L1
ENSG00000060688 SNRNP40 -465010 sc-eQTL 6.30e-01 -0.0407 0.0844 0.386 NK L1
ENSG00000121753 ADGRB2 -933115 sc-eQTL 3.68e-01 0.0654 0.0726 0.386 NK L1
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 7.99e-02 -0.101 0.0574 0.386 NK L1
ENSG00000134644 PUM1 -234213 sc-eQTL 4.14e-01 -0.0496 0.0606 0.386 NK L1
ENSG00000162511 LAPTM5 74004 sc-eQTL 8.39e-02 0.12 0.0693 0.386 NK L1
ENSG00000162517 PEF1 -813118 sc-eQTL 8.61e-01 0.00895 0.051 0.386 NK L1
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 1.83e-01 0.104 0.0781 0.386 NK L1
ENSG00000287510 AL137857.1 100085 sc-eQTL 1.05e-01 0.117 0.072 0.386 NK L1
ENSG00000060688 SNRNP40 -465010 sc-eQTL 7.09e-01 0.0242 0.0649 0.387 Other_T L1
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 3.77e-01 -0.0613 0.0692 0.387 Other_T L1
ENSG00000134644 PUM1 -234213 sc-eQTL 1.80e-01 0.0834 0.0621 0.387 Other_T L1
ENSG00000162511 LAPTM5 74004 sc-eQTL 3.98e-01 0.0432 0.051 0.387 Other_T L1
ENSG00000162517 PEF1 -813118 sc-eQTL 2.01e-01 -0.0872 0.068 0.387 Other_T L1
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 5.04e-01 -0.056 0.0836 0.387 Other_T L1
ENSG00000287510 AL137857.1 100085 sc-eQTL 8.95e-01 0.0115 0.0872 0.387 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -465010 sc-eQTL 6.05e-01 -0.052 0.1 0.395 B_Activated L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 7.29e-01 -0.0351 0.101 0.395 B_Activated L2
ENSG00000134644 PUM1 -234213 sc-eQTL 6.56e-01 0.042 0.0941 0.395 B_Activated L2
ENSG00000162510 MATN1 108193 sc-eQTL 2.14e-01 0.102 0.0819 0.395 B_Activated L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 6.93e-02 0.104 0.0568 0.395 B_Activated L2
ENSG00000162517 PEF1 -813118 sc-eQTL 3.71e-01 -0.0875 0.0975 0.395 B_Activated L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 1.04e-01 -0.15 0.092 0.395 B_Activated L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 6.28e-01 -0.0398 0.0819 0.395 B_Activated L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 3.80e-01 0.0839 0.0955 0.386 B_Intermediate L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 2.62e-01 -0.0894 0.0795 0.386 B_Intermediate L2
ENSG00000134644 PUM1 -234213 sc-eQTL 6.38e-01 -0.0354 0.0751 0.386 B_Intermediate L2
ENSG00000162510 MATN1 108193 sc-eQTL 4.51e-02 -0.156 0.0775 0.386 B_Intermediate L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 5.50e-01 0.0287 0.048 0.386 B_Intermediate L2
ENSG00000162517 PEF1 -813118 sc-eQTL 7.32e-01 -0.0306 0.0891 0.386 B_Intermediate L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 7.07e-01 0.0254 0.0674 0.386 B_Intermediate L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 1.98e-01 0.097 0.0751 0.386 B_Intermediate L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 7.56e-01 0.0293 0.0941 0.39 B_Memory L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 9.50e-01 0.00544 0.0867 0.39 B_Memory L2
ENSG00000134644 PUM1 -234213 sc-eQTL 2.90e-01 -0.0798 0.0753 0.39 B_Memory L2
ENSG00000162510 MATN1 108193 sc-eQTL 8.84e-01 -0.0105 0.0722 0.39 B_Memory L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 2.39e-01 0.0753 0.0638 0.39 B_Memory L2
ENSG00000162517 PEF1 -813118 sc-eQTL 4.35e-01 -0.0667 0.0853 0.39 B_Memory L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 4.63e-01 0.0537 0.0731 0.39 B_Memory L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 7.53e-01 -0.027 0.0858 0.39 B_Memory L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 2.58e-01 -0.0969 0.0854 0.387 B_Naive1 L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 5.64e-01 -0.0427 0.0739 0.387 B_Naive1 L2
ENSG00000134644 PUM1 -234213 sc-eQTL 2.49e-01 0.0752 0.065 0.387 B_Naive1 L2
ENSG00000162510 MATN1 108193 sc-eQTL 3.28e-01 0.0648 0.066 0.387 B_Naive1 L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 2.63e-01 0.0495 0.0441 0.387 B_Naive1 L2
ENSG00000162517 PEF1 -813118 sc-eQTL 9.52e-01 0.00469 0.0779 0.387 B_Naive1 L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 3.57e-01 0.0535 0.058 0.387 B_Naive1 L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 6.01e-01 0.0375 0.0717 0.387 B_Naive1 L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 4.88e-01 -0.0627 0.0904 0.388 B_Naive2 L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 8.54e-01 -0.0138 0.0747 0.388 B_Naive2 L2
ENSG00000134644 PUM1 -234213 sc-eQTL 3.21e-01 -0.0725 0.0729 0.388 B_Naive2 L2
ENSG00000162510 MATN1 108193 sc-eQTL 9.73e-01 0.00235 0.0702 0.388 B_Naive2 L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 3.90e-01 0.041 0.0476 0.388 B_Naive2 L2
ENSG00000162517 PEF1 -813118 sc-eQTL 5.97e-01 0.0459 0.0867 0.388 B_Naive2 L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 8.66e-01 -0.0118 0.0694 0.388 B_Naive2 L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 4.38e-02 0.151 0.0742 0.388 B_Naive2 L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 7.67e-01 -0.0268 0.0904 0.386 CD4_CTL L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 9.99e-01 9.03e-05 0.0889 0.386 CD4_CTL L2
ENSG00000134644 PUM1 -234213 sc-eQTL 8.43e-01 -0.0173 0.0872 0.386 CD4_CTL L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 4.35e-02 0.156 0.0769 0.386 CD4_CTL L2
ENSG00000162517 PEF1 -813118 sc-eQTL 8.92e-01 0.0108 0.0797 0.386 CD4_CTL L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 6.06e-01 0.0439 0.085 0.386 CD4_CTL L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 3.96e-01 -0.0637 0.0749 0.386 CD4_CTL L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 7.50e-01 0.0226 0.0708 0.387 CD4_Naive L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 5.00e-01 -0.0423 0.0627 0.387 CD4_Naive L2
ENSG00000134644 PUM1 -234213 sc-eQTL 6.17e-01 -0.0251 0.0501 0.387 CD4_Naive L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 6.57e-01 0.0239 0.0537 0.387 CD4_Naive L2
ENSG00000162517 PEF1 -813118 sc-eQTL 5.76e-01 -0.033 0.0588 0.387 CD4_Naive L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 4.62e-01 -0.0401 0.0544 0.387 CD4_Naive L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 2.62e-01 0.0702 0.0624 0.387 CD4_Naive L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 1.03e-01 -0.144 0.0881 0.387 CD4_TCM L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 7.65e-01 0.0214 0.0715 0.387 CD4_TCM L2
ENSG00000134644 PUM1 -234213 sc-eQTL 7.40e-01 0.021 0.0632 0.387 CD4_TCM L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 1.92e-01 0.0684 0.0523 0.387 CD4_TCM L2
ENSG00000162517 PEF1 -813118 sc-eQTL 5.74e-01 0.0396 0.0703 0.387 CD4_TCM L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 6.52e-01 0.03 0.0666 0.387 CD4_TCM L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 4.22e-01 0.0596 0.0741 0.387 CD4_TCM L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 8.91e-01 0.0121 0.0875 0.387 CD4_TEM L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 4.44e-01 0.0638 0.0833 0.387 CD4_TEM L2
ENSG00000134644 PUM1 -234213 sc-eQTL 4.28e-02 -0.14 0.0688 0.387 CD4_TEM L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 1.14e-01 0.111 0.0699 0.387 CD4_TEM L2
ENSG00000162517 PEF1 -813118 sc-eQTL 8.21e-01 0.0178 0.0787 0.387 CD4_TEM L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 8.06e-01 0.0202 0.0822 0.387 CD4_TEM L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 9.30e-01 0.00711 0.081 0.387 CD4_TEM L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 9.09e-01 -0.0113 0.0987 0.387 CD8_CTL L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 5.33e-02 -0.146 0.075 0.387 CD8_CTL L2
ENSG00000134644 PUM1 -234213 sc-eQTL 3.88e-01 0.0635 0.0734 0.387 CD8_CTL L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 5.98e-01 0.043 0.0813 0.387 CD8_CTL L2
ENSG00000162517 PEF1 -813118 sc-eQTL 2.73e-01 0.0776 0.0707 0.387 CD8_CTL L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 6.75e-01 -0.036 0.0855 0.387 CD8_CTL L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 6.53e-01 -0.0362 0.0804 0.387 CD8_CTL L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 4.30e-01 -0.0708 0.0895 0.387 CD8_Naive L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 2.63e-01 -0.0865 0.0771 0.387 CD8_Naive L2
ENSG00000134644 PUM1 -234213 sc-eQTL 4.23e-01 0.0499 0.0621 0.387 CD8_Naive L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 5.46e-01 0.036 0.0596 0.387 CD8_Naive L2
ENSG00000162517 PEF1 -813118 sc-eQTL 4.39e-01 -0.0641 0.0827 0.387 CD8_Naive L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 6.35e-01 0.0354 0.0744 0.387 CD8_Naive L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 3.00e-01 -0.0839 0.0808 0.387 CD8_Naive L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 8.13e-01 0.0233 0.0987 0.389 CD8_TCM L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 8.24e-01 0.0201 0.0905 0.389 CD8_TCM L2
ENSG00000134644 PUM1 -234213 sc-eQTL 5.57e-01 0.0501 0.085 0.389 CD8_TCM L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 4.84e-01 -0.0624 0.089 0.389 CD8_TCM L2
ENSG00000162517 PEF1 -813118 sc-eQTL 5.27e-01 0.0576 0.0909 0.389 CD8_TCM L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 5.55e-01 -0.0487 0.0824 0.389 CD8_TCM L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 7.64e-02 0.147 0.0827 0.389 CD8_TCM L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 5.29e-01 -0.0593 0.0941 0.4 CD8_TEM L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 6.73e-01 -0.0382 0.0903 0.4 CD8_TEM L2
ENSG00000134644 PUM1 -234213 sc-eQTL 1.21e-01 0.143 0.0917 0.4 CD8_TEM L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 8.19e-01 0.0199 0.0868 0.4 CD8_TEM L2
ENSG00000162517 PEF1 -813118 sc-eQTL 4.08e-01 -0.0676 0.0816 0.4 CD8_TEM L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 6.40e-01 -0.0422 0.09 0.4 CD8_TEM L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 3.88e-01 0.0704 0.0814 0.4 CD8_TEM L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 7.70e-01 0.0274 0.0937 0.392 MAIT L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 9.93e-02 -0.137 0.0825 0.392 MAIT L2
ENSG00000134644 PUM1 -234213 sc-eQTL 5.56e-02 0.152 0.0789 0.392 MAIT L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 8.12e-01 -0.0179 0.0751 0.392 MAIT L2
ENSG00000162517 PEF1 -813118 sc-eQTL 1.71e-02 -0.196 0.0814 0.392 MAIT L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 9.87e-01 -0.00133 0.0836 0.392 MAIT L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 8.71e-01 0.014 0.0862 0.392 MAIT L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 8.24e-01 0.0216 0.0967 0.389 NK_CD56bright L2
ENSG00000121753 ADGRB2 -933115 sc-eQTL 5.67e-01 -0.0434 0.0757 0.389 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 4.62e-01 -0.0602 0.0817 0.389 NK_CD56bright L2
ENSG00000134644 PUM1 -234213 sc-eQTL 5.00e-02 -0.168 0.0851 0.389 NK_CD56bright L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 6.68e-01 0.0364 0.0846 0.389 NK_CD56bright L2
ENSG00000162517 PEF1 -813118 sc-eQTL 3.32e-01 0.0798 0.0821 0.389 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 2.01e-01 -0.109 0.0848 0.389 NK_CD56bright L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 5.05e-01 0.0559 0.0838 0.389 NK_CD56bright L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 7.10e-01 -0.0331 0.0891 0.386 NK_CD56dim L2
ENSG00000121753 ADGRB2 -933115 sc-eQTL 2.75e-01 0.0856 0.0782 0.386 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 3.23e-01 -0.0652 0.0657 0.386 NK_CD56dim L2
ENSG00000134644 PUM1 -234213 sc-eQTL 5.82e-01 -0.0373 0.0675 0.386 NK_CD56dim L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 6.99e-02 0.13 0.0715 0.386 NK_CD56dim L2
ENSG00000162517 PEF1 -813118 sc-eQTL 4.80e-01 0.0453 0.0641 0.386 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 4.93e-01 0.0619 0.0902 0.386 NK_CD56dim L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 3.06e-01 0.0763 0.0743 0.386 NK_CD56dim L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 3.67e-01 0.0873 0.0966 0.386 NK_HLA L2
ENSG00000121753 ADGRB2 -933115 sc-eQTL 6.67e-01 0.0331 0.0768 0.386 NK_HLA L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 6.50e-01 -0.0392 0.0864 0.386 NK_HLA L2
ENSG00000134644 PUM1 -234213 sc-eQTL 9.49e-01 0.00544 0.0842 0.386 NK_HLA L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 5.62e-01 0.0466 0.0803 0.386 NK_HLA L2
ENSG00000162517 PEF1 -813118 sc-eQTL 4.25e-01 -0.0724 0.0904 0.386 NK_HLA L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 1.09e-01 0.137 0.085 0.386 NK_HLA L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 3.76e-01 0.0733 0.0825 0.386 NK_HLA L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 5.91e-01 -0.0473 0.0878 0.386 NK_cytokine L2
ENSG00000121753 ADGRB2 -933115 sc-eQTL 4.67e-01 0.0578 0.0793 0.386 NK_cytokine L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 3.98e-01 -0.0579 0.0684 0.386 NK_cytokine L2
ENSG00000134644 PUM1 -234213 sc-eQTL 1.41e-01 -0.109 0.0737 0.386 NK_cytokine L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 2.26e-01 0.0987 0.0813 0.386 NK_cytokine L2
ENSG00000162517 PEF1 -813118 sc-eQTL 7.92e-01 0.0183 0.0695 0.386 NK_cytokine L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 4.18e-01 0.07 0.0864 0.386 NK_cytokine L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 4.52e-01 0.0606 0.0804 0.386 NK_cytokine L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 2.94e-01 -0.107 0.101 0.37 PB L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 6.23e-01 -0.0582 0.118 0.37 PB L2
ENSG00000134644 PUM1 -234213 sc-eQTL 7.94e-01 -0.0269 0.103 0.37 PB L2
ENSG00000162510 MATN1 108193 sc-eQTL 9.11e-01 -0.0107 0.0958 0.37 PB L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 4.36e-01 -0.0533 0.0682 0.37 PB L2
ENSG00000162517 PEF1 -813118 sc-eQTL 1.42e-01 -0.154 0.104 0.37 PB L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 5.54e-01 -0.0555 0.0935 0.37 PB L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 1.62e-02 0.237 0.0971 0.37 PB L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 2.51e-01 -0.0803 0.0698 0.389 Pro_T L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 9.75e-01 -0.00283 0.0888 0.389 Pro_T L2
ENSG00000134644 PUM1 -234213 sc-eQTL 7.22e-01 -0.0295 0.0828 0.389 Pro_T L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 4.61e-01 0.0438 0.0594 0.389 Pro_T L2
ENSG00000162517 PEF1 -813118 sc-eQTL 4.48e-01 -0.0663 0.0871 0.389 Pro_T L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 5.86e-01 0.0452 0.083 0.389 Pro_T L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 1.36e-01 0.114 0.076 0.389 Pro_T L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 8.08e-01 0.0225 0.0925 0.387 Treg L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 2.43e-01 0.105 0.0892 0.387 Treg L2
ENSG00000134644 PUM1 -234213 sc-eQTL 7.88e-01 -0.0193 0.0716 0.387 Treg L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 1.04e-01 0.133 0.0815 0.387 Treg L2
ENSG00000162517 PEF1 -813118 sc-eQTL 2.43e-01 0.103 0.0883 0.387 Treg L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 2.34e-01 0.0994 0.0833 0.387 Treg L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 6.01e-01 0.0437 0.0834 0.387 Treg L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 9.32e-01 0.0082 0.096 0.39 cDC L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 2.41e-01 -0.122 0.104 0.39 cDC L2
ENSG00000134644 PUM1 -234213 sc-eQTL 7.79e-01 0.0251 0.0893 0.39 cDC L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 8.06e-01 0.0154 0.0626 0.39 cDC L2
ENSG00000162517 PEF1 -813118 sc-eQTL 7.48e-02 0.161 0.0898 0.39 cDC L2
ENSG00000168528 SERINC2 -577787 sc-eQTL 9.26e-01 -0.00748 0.0803 0.39 cDC L2
ENSG00000284543 LINC01226 -674448 sc-eQTL 9.61e-02 -0.131 0.0783 0.39 cDC L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 5.55e-02 0.162 0.0841 0.39 cDC L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 4.54e-01 -0.0553 0.0737 0.387 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 3.75e-01 -0.0732 0.0822 0.387 cMono_IL1B L2
ENSG00000134644 PUM1 -234213 sc-eQTL 8.51e-01 0.0105 0.0557 0.387 cMono_IL1B L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 4.56e-01 -0.0365 0.0489 0.387 cMono_IL1B L2
ENSG00000162512 SDC3 -76980 sc-eQTL 8.84e-02 -0.157 0.0915 0.387 cMono_IL1B L2
ENSG00000162517 PEF1 -813118 sc-eQTL 4.23e-01 -0.0603 0.0752 0.387 cMono_IL1B L2
ENSG00000168528 SERINC2 -577787 sc-eQTL 2.60e-01 0.105 0.093 0.387 cMono_IL1B L2
ENSG00000284543 LINC01226 -674448 sc-eQTL 7.75e-01 0.0236 0.0825 0.387 cMono_IL1B L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 6.18e-01 -0.0384 0.0769 0.387 cMono_IL1B L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 5.40e-01 0.0474 0.0772 0.387 cMono_S100A L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 6.40e-02 -0.169 0.0906 0.387 cMono_S100A L2
ENSG00000134644 PUM1 -234213 sc-eQTL 8.46e-01 -0.0128 0.066 0.387 cMono_S100A L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 3.87e-01 -0.0438 0.0506 0.387 cMono_S100A L2
ENSG00000162512 SDC3 -76980 sc-eQTL 7.31e-01 0.0301 0.0876 0.387 cMono_S100A L2
ENSG00000162517 PEF1 -813118 sc-eQTL 3.55e-02 -0.166 0.0783 0.387 cMono_S100A L2
ENSG00000168528 SERINC2 -577787 sc-eQTL 2.69e-01 0.103 0.0925 0.387 cMono_S100A L2
ENSG00000284543 LINC01226 -674448 sc-eQTL 2.46e-01 -0.0874 0.0751 0.387 cMono_S100A L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 4.30e-01 -0.0598 0.0755 0.387 cMono_S100A L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 9.57e-01 0.0063 0.117 0.391 gdT L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 3.63e-01 0.0918 0.101 0.391 gdT L2
ENSG00000134644 PUM1 -234213 sc-eQTL 7.25e-01 -0.0366 0.104 0.391 gdT L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 1.52e-01 0.162 0.112 0.391 gdT L2
ENSG00000162517 PEF1 -813118 sc-eQTL 9.31e-01 -0.00903 0.103 0.391 gdT L2
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 1.22e-01 -0.161 0.103 0.391 gdT L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 5.98e-01 -0.0534 0.101 0.391 gdT L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 8.57e-01 -0.0159 0.0877 0.389 intMono L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 6.69e-01 -0.0403 0.0943 0.389 intMono L2
ENSG00000134644 PUM1 -234213 sc-eQTL 7.39e-01 -0.0267 0.08 0.389 intMono L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 2.39e-01 0.0739 0.0626 0.389 intMono L2
ENSG00000162512 SDC3 -76980 sc-eQTL 7.63e-01 -0.026 0.086 0.389 intMono L2
ENSG00000162517 PEF1 -813118 sc-eQTL 8.31e-01 -0.0193 0.0903 0.389 intMono L2
ENSG00000168528 SERINC2 -577787 sc-eQTL 3.56e-01 0.083 0.0898 0.389 intMono L2
ENSG00000284543 LINC01226 -674448 sc-eQTL 6.42e-01 -0.0397 0.0852 0.389 intMono L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 1.23e-01 0.131 0.0848 0.389 intMono L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 8.05e-01 -0.0199 0.0805 0.389 ncMono L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 6.35e-01 0.0408 0.0858 0.389 ncMono L2
ENSG00000134644 PUM1 -234213 sc-eQTL 9.13e-01 -0.00764 0.0701 0.389 ncMono L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 5.72e-01 0.036 0.0637 0.389 ncMono L2
ENSG00000162512 SDC3 -76980 sc-eQTL 9.56e-01 -0.00398 0.0714 0.389 ncMono L2
ENSG00000162517 PEF1 -813118 sc-eQTL 6.94e-01 -0.0323 0.0819 0.389 ncMono L2
ENSG00000168528 SERINC2 -577787 sc-eQTL 5.68e-01 0.0446 0.0779 0.389 ncMono L2
ENSG00000284543 LINC01226 -674448 sc-eQTL 1.55e-01 0.11 0.0775 0.389 ncMono L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 1.18e-01 0.126 0.0802 0.389 ncMono L2
ENSG00000060688 SNRNP40 -465010 sc-eQTL 9.42e-01 -0.00697 0.0953 0.398 pDC L2
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 2.19e-02 -0.238 0.103 0.398 pDC L2
ENSG00000134644 PUM1 -234213 sc-eQTL 8.92e-01 0.0118 0.0867 0.398 pDC L2
ENSG00000162511 LAPTM5 74004 sc-eQTL 3.22e-01 -0.0799 0.0804 0.398 pDC L2
ENSG00000162517 PEF1 -813118 sc-eQTL 4.74e-01 0.0749 0.104 0.398 pDC L2
ENSG00000168528 SERINC2 -577787 sc-eQTL 7.93e-01 0.0257 0.0978 0.398 pDC L2
ENSG00000284543 LINC01226 -674448 sc-eQTL 8.26e-01 -0.0167 0.0759 0.398 pDC L2
ENSG00000287510 AL137857.1 100085 sc-eQTL 2.50e-01 0.103 0.0889 0.398 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -465010 sc-eQTL 3.34e-01 0.0884 0.0913 0.387 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 5.01e-01 -0.0513 0.0761 0.387 B_Memory LOneK1K
ENSG00000134644 PUM1 -234213 sc-eQTL 3.17e-01 -0.0675 0.0674 0.387 B_Memory LOneK1K
ENSG00000162510 MATN1 108193 sc-eQTL 2.26e-01 -0.0932 0.0767 0.387 B_Memory LOneK1K
ENSG00000162511 LAPTM5 74004 sc-eQTL 5.73e-01 0.0273 0.0483 0.387 B_Memory LOneK1K
ENSG00000162517 PEF1 -813118 sc-eQTL 3.46e-01 -0.0756 0.08 0.387 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 9.23e-01 0.0062 0.064 0.387 B_Memory LOneK1K
ENSG00000287510 AL137857.1 100085 sc-eQTL 8.87e-01 0.00995 0.0697 0.387 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -465010 sc-eQTL 3.48e-01 -0.0779 0.0828 0.387 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 4.76e-01 -0.0468 0.0655 0.387 B_Naive LOneK1K
ENSG00000134644 PUM1 -234213 sc-eQTL 6.46e-01 0.0285 0.062 0.387 B_Naive LOneK1K
ENSG00000162510 MATN1 108193 sc-eQTL 3.17e-01 0.0598 0.0596 0.387 B_Naive LOneK1K
ENSG00000162511 LAPTM5 74004 sc-eQTL 3.90e-01 0.0362 0.042 0.387 B_Naive LOneK1K
ENSG00000162517 PEF1 -813118 sc-eQTL 6.83e-01 0.0314 0.0768 0.387 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 3.27e-01 0.0532 0.0542 0.387 B_Naive LOneK1K
ENSG00000287510 AL137857.1 100085 sc-eQTL 3.51e-01 0.0601 0.0644 0.387 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -465010 sc-eQTL 3.79e-01 -0.0621 0.0704 0.387 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 6.91e-02 -0.145 0.0792 0.387 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -234213 sc-eQTL 9.96e-01 0.000283 0.0509 0.387 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 74004 sc-eQTL 7.57e-01 -0.0138 0.0448 0.387 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -76980 sc-eQTL 2.76e-01 -0.0994 0.0911 0.387 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -813118 sc-eQTL 1.54e-02 -0.155 0.0633 0.387 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -577787 sc-eQTL 3.53e-01 0.0873 0.0938 0.387 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -674448 sc-eQTL 7.97e-01 -0.0199 0.077 0.387 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 100085 sc-eQTL 6.79e-01 -0.0299 0.0721 0.387 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -465010 sc-eQTL 8.22e-01 0.0172 0.0763 0.386 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 3.91e-01 -0.0716 0.0834 0.386 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -234213 sc-eQTL 9.75e-01 0.00217 0.0684 0.386 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 74004 sc-eQTL 3.00e-01 0.0567 0.0546 0.386 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -76980 sc-eQTL 2.86e-01 -0.0854 0.0797 0.386 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -813118 sc-eQTL 6.31e-01 -0.0349 0.0726 0.386 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -577787 sc-eQTL 2.85e-01 0.0886 0.0827 0.386 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -674448 sc-eQTL 9.24e-01 -0.00751 0.0787 0.386 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 100085 sc-eQTL 3.15e-02 0.169 0.0779 0.386 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -465010 sc-eQTL 4.45e-01 -0.0649 0.0848 0.386 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -933115 sc-eQTL 2.93e-01 0.076 0.0721 0.386 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -465204 sc-eQTL 1.04e-01 -0.0941 0.0576 0.386 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -234213 sc-eQTL 5.67e-01 -0.0364 0.0635 0.386 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 74004 sc-eQTL 6.24e-02 0.132 0.0704 0.386 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -813118 sc-eQTL 8.85e-01 0.00778 0.0539 0.386 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 113274 sc-eQTL 1.08e-01 0.131 0.0814 0.386 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 100085 sc-eQTL 3.12e-02 0.152 0.0699 0.386 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 \N -465204 5.74e-07 2.67e-07 6.41e-08 3.05e-07 1.01e-07 1.44e-07 4.05e-07 5.89e-08 2.04e-07 1.28e-07 3.66e-07 1.57e-07 4.27e-07 8.26e-08 1.01e-07 1.06e-07 8.53e-08 2.66e-07 7.53e-08 8.1e-08 1.33e-07 2.09e-07 2.33e-07 4.15e-08 4.54e-07 1.76e-07 1.48e-07 1.52e-07 1.87e-07 2.59e-07 1.86e-07 8.14e-08 4.97e-08 1.01e-07 1.67e-07 3.18e-08 5.96e-08 7.25e-08 5.78e-08 8.34e-08 3.68e-08 3.06e-07 3.35e-08 1.75e-08 3.48e-08 1.19e-08 7.52e-08 2.13e-09 4.67e-08