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Genes within 1Mb (chr1:30825922:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -470866 sc-eQTL 9.14e-01 -0.0155 0.143 0.912 B L1
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 9.17e-01 -0.0119 0.114 0.912 B L1
ENSG00000134644 PUM1 -240069 sc-eQTL 5.70e-01 0.0546 0.0958 0.912 B L1
ENSG00000162510 MATN1 102337 sc-eQTL 9.41e-01 0.00752 0.101 0.912 B L1
ENSG00000162511 LAPTM5 68148 sc-eQTL 3.52e-01 -0.0736 0.0788 0.912 B L1
ENSG00000162517 PEF1 -818974 sc-eQTL 7.57e-01 -0.0369 0.119 0.912 B L1
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 9.18e-01 0.00958 0.0925 0.912 B L1
ENSG00000287510 AL137857.1 94229 sc-eQTL 4.65e-01 0.0801 0.109 0.912 B L1
ENSG00000060688 SNRNP40 -470866 sc-eQTL 4.27e-01 0.0967 0.122 0.912 CD4T L1
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 9.30e-01 0.00831 0.0951 0.912 CD4T L1
ENSG00000134644 PUM1 -240069 sc-eQTL 4.58e-01 -0.0628 0.0846 0.912 CD4T L1
ENSG00000162511 LAPTM5 68148 sc-eQTL 1.07e-01 0.151 0.0933 0.912 CD4T L1
ENSG00000162517 PEF1 -818974 sc-eQTL 1.39e-01 0.145 0.0976 0.912 CD4T L1
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 3.88e-01 0.0726 0.0838 0.912 CD4T L1
ENSG00000287510 AL137857.1 94229 sc-eQTL 4.77e-01 0.0716 0.1 0.912 CD4T L1
ENSG00000060688 SNRNP40 -470866 sc-eQTL 9.77e-01 0.00475 0.163 0.912 CD8T L1
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 1.42e-01 -0.158 0.108 0.912 CD8T L1
ENSG00000134644 PUM1 -240069 sc-eQTL 9.42e-01 -0.007 0.0952 0.912 CD8T L1
ENSG00000162511 LAPTM5 68148 sc-eQTL 3.35e-01 0.0891 0.0923 0.912 CD8T L1
ENSG00000162517 PEF1 -818974 sc-eQTL 4.22e-01 0.0916 0.114 0.912 CD8T L1
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 1.32e-01 0.163 0.108 0.912 CD8T L1
ENSG00000287510 AL137857.1 94229 sc-eQTL 5.36e-01 -0.0845 0.136 0.912 CD8T L1
ENSG00000060688 SNRNP40 -470866 sc-eQTL 8.50e-01 0.028 0.147 0.917 DC L1
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 1.22e-01 0.269 0.173 0.917 DC L1
ENSG00000134644 PUM1 -240069 sc-eQTL 9.88e-01 -0.0021 0.137 0.917 DC L1
ENSG00000162511 LAPTM5 68148 sc-eQTL 1.16e-01 -0.153 0.097 0.917 DC L1
ENSG00000162517 PEF1 -818974 sc-eQTL 3.08e-01 0.161 0.158 0.917 DC L1
ENSG00000168528 SERINC2 -583643 sc-eQTL 6.84e-01 0.0655 0.161 0.917 DC L1
ENSG00000284543 LINC01226 -680304 sc-eQTL 8.21e-02 -0.185 0.106 0.917 DC L1
ENSG00000287510 AL137857.1 94229 sc-eQTL 5.72e-01 0.0874 0.154 0.917 DC L1
ENSG00000060688 SNRNP40 -470866 sc-eQTL 8.28e-01 -0.0244 0.112 0.912 Mono L1
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 8.17e-02 -0.241 0.138 0.912 Mono L1
ENSG00000134644 PUM1 -240069 sc-eQTL 2.52e-01 -0.102 0.0888 0.912 Mono L1
ENSG00000162511 LAPTM5 68148 sc-eQTL 2.71e-01 -0.0902 0.0817 0.912 Mono L1
ENSG00000162512 SDC3 -82836 sc-eQTL 9.84e-01 0.00313 0.158 0.912 Mono L1
ENSG00000162517 PEF1 -818974 sc-eQTL 5.57e-01 -0.0649 0.11 0.912 Mono L1
ENSG00000168528 SERINC2 -583643 sc-eQTL 7.47e-03 0.449 0.166 0.912 Mono L1
ENSG00000284543 LINC01226 -680304 sc-eQTL 4.29e-01 0.118 0.149 0.912 Mono L1
ENSG00000287510 AL137857.1 94229 sc-eQTL 3.20e-01 -0.129 0.13 0.912 Mono L1
ENSG00000060688 SNRNP40 -470866 sc-eQTL 1.36e-01 0.233 0.156 0.912 NK L1
ENSG00000121753 ADGRB2 -938971 sc-eQTL 3.98e-01 0.114 0.134 0.912 NK L1
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 2.23e-01 -0.13 0.107 0.912 NK L1
ENSG00000134644 PUM1 -240069 sc-eQTL 1.30e-01 -0.17 0.112 0.912 NK L1
ENSG00000162511 LAPTM5 68148 sc-eQTL 4.38e-01 0.1 0.129 0.912 NK L1
ENSG00000162517 PEF1 -818974 sc-eQTL 1.89e-01 0.124 0.0939 0.912 NK L1
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 2.21e-01 0.178 0.145 0.912 NK L1
ENSG00000287510 AL137857.1 94229 sc-eQTL 9.49e-01 -0.00867 0.134 0.912 NK L1
ENSG00000060688 SNRNP40 -470866 sc-eQTL 4.09e-02 0.24 0.117 0.912 Other_T L1
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 4.71e-01 -0.0911 0.126 0.912 Other_T L1
ENSG00000134644 PUM1 -240069 sc-eQTL 7.06e-01 -0.0429 0.113 0.912 Other_T L1
ENSG00000162511 LAPTM5 68148 sc-eQTL 5.49e-01 0.0558 0.0929 0.912 Other_T L1
ENSG00000162517 PEF1 -818974 sc-eQTL 5.80e-01 -0.0687 0.124 0.912 Other_T L1
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 3.23e-01 0.151 0.152 0.912 Other_T L1
ENSG00000287510 AL137857.1 94229 sc-eQTL 3.32e-01 0.154 0.158 0.912 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -470866 sc-eQTL 1.24e-01 0.282 0.182 0.908 B_Activated L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 2.29e-01 0.223 0.185 0.908 B_Activated L2
ENSG00000134644 PUM1 -240069 sc-eQTL 3.55e-01 -0.159 0.172 0.908 B_Activated L2
ENSG00000162510 MATN1 102337 sc-eQTL 6.37e-01 0.071 0.15 0.908 B_Activated L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 3.94e-01 -0.0896 0.105 0.908 B_Activated L2
ENSG00000162517 PEF1 -818974 sc-eQTL 9.50e-01 -0.0113 0.179 0.908 B_Activated L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 9.81e-01 0.00407 0.169 0.908 B_Activated L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 5.90e-01 -0.0808 0.15 0.908 B_Activated L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 2.64e-01 0.199 0.178 0.912 B_Intermediate L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 8.60e-01 0.0262 0.149 0.912 B_Intermediate L2
ENSG00000134644 PUM1 -240069 sc-eQTL 2.45e-01 0.163 0.14 0.912 B_Intermediate L2
ENSG00000162510 MATN1 102337 sc-eQTL 5.74e-01 -0.0821 0.146 0.912 B_Intermediate L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 7.28e-01 -0.0312 0.0896 0.912 B_Intermediate L2
ENSG00000162517 PEF1 -818974 sc-eQTL 6.74e-01 -0.0701 0.166 0.912 B_Intermediate L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 5.33e-01 0.0784 0.126 0.912 B_Intermediate L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 9.48e-01 -0.00918 0.141 0.912 B_Intermediate L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 9.30e-01 -0.015 0.171 0.916 B_Memory L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 4.27e-01 -0.125 0.158 0.916 B_Memory L2
ENSG00000134644 PUM1 -240069 sc-eQTL 7.31e-01 -0.0474 0.137 0.916 B_Memory L2
ENSG00000162510 MATN1 102337 sc-eQTL 5.75e-01 0.0738 0.131 0.916 B_Memory L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 6.67e-01 -0.0502 0.116 0.916 B_Memory L2
ENSG00000162517 PEF1 -818974 sc-eQTL 1.44e-01 -0.227 0.155 0.916 B_Memory L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 4.60e-01 -0.0985 0.133 0.916 B_Memory L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 4.88e-01 -0.108 0.156 0.916 B_Memory L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 6.82e-01 -0.0627 0.153 0.912 B_Naive1 L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 3.08e-01 -0.135 0.132 0.912 B_Naive1 L2
ENSG00000134644 PUM1 -240069 sc-eQTL 3.51e-01 0.109 0.116 0.912 B_Naive1 L2
ENSG00000162510 MATN1 102337 sc-eQTL 7.37e-01 0.0398 0.118 0.912 B_Naive1 L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 8.37e-01 -0.0163 0.0789 0.912 B_Naive1 L2
ENSG00000162517 PEF1 -818974 sc-eQTL 2.96e-01 0.145 0.139 0.912 B_Naive1 L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 9.37e-01 0.00821 0.104 0.912 B_Naive1 L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 8.50e-01 -0.0243 0.128 0.912 B_Naive1 L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 4.15e-01 0.134 0.164 0.914 B_Naive2 L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 6.85e-01 0.0551 0.136 0.914 B_Naive2 L2
ENSG00000134644 PUM1 -240069 sc-eQTL 7.01e-01 -0.051 0.133 0.914 B_Naive2 L2
ENSG00000162510 MATN1 102337 sc-eQTL 1.28e-01 0.194 0.127 0.914 B_Naive2 L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 9.83e-01 0.00183 0.0866 0.914 B_Naive2 L2
ENSG00000162517 PEF1 -818974 sc-eQTL 4.58e-01 0.117 0.157 0.914 B_Naive2 L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 8.18e-01 0.0291 0.126 0.914 B_Naive2 L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 7.21e-02 0.244 0.135 0.914 B_Naive2 L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 5.39e-01 0.102 0.166 0.914 CD4_CTL L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 4.61e-01 -0.12 0.163 0.914 CD4_CTL L2
ENSG00000134644 PUM1 -240069 sc-eQTL 6.07e-01 0.0824 0.16 0.914 CD4_CTL L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 6.55e-01 0.0639 0.143 0.914 CD4_CTL L2
ENSG00000162517 PEF1 -818974 sc-eQTL 3.62e-02 0.305 0.145 0.914 CD4_CTL L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 5.64e-01 0.0902 0.156 0.914 CD4_CTL L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 5.43e-01 -0.0839 0.138 0.914 CD4_CTL L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 7.90e-01 -0.034 0.127 0.912 CD4_Naive L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 6.60e-01 0.0498 0.113 0.912 CD4_Naive L2
ENSG00000134644 PUM1 -240069 sc-eQTL 3.91e-01 -0.0774 0.0901 0.912 CD4_Naive L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 1.37e-01 0.144 0.0962 0.912 CD4_Naive L2
ENSG00000162517 PEF1 -818974 sc-eQTL 6.04e-01 0.055 0.106 0.912 CD4_Naive L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 9.47e-01 -0.00651 0.0981 0.912 CD4_Naive L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 8.70e-01 0.0185 0.113 0.912 CD4_Naive L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 4.74e-01 0.116 0.162 0.912 CD4_TCM L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 2.35e-01 -0.155 0.13 0.912 CD4_TCM L2
ENSG00000134644 PUM1 -240069 sc-eQTL 6.61e-01 -0.0507 0.115 0.912 CD4_TCM L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 1.20e-01 0.149 0.0953 0.912 CD4_TCM L2
ENSG00000162517 PEF1 -818974 sc-eQTL 1.89e-02 0.3 0.127 0.912 CD4_TCM L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 9.67e-01 0.00506 0.122 0.912 CD4_TCM L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 4.65e-01 0.099 0.135 0.912 CD4_TCM L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 2.33e-01 0.191 0.16 0.912 CD4_TEM L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 2.98e-01 0.159 0.152 0.912 CD4_TEM L2
ENSG00000134644 PUM1 -240069 sc-eQTL 9.18e-01 0.0131 0.127 0.912 CD4_TEM L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 2.06e-01 0.163 0.128 0.912 CD4_TEM L2
ENSG00000162517 PEF1 -818974 sc-eQTL 2.58e-01 0.163 0.144 0.912 CD4_TEM L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 7.88e-02 0.264 0.149 0.912 CD4_TEM L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 7.47e-01 0.0478 0.148 0.912 CD4_TEM L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 1.15e-01 0.275 0.173 0.912 CD8_CTL L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 3.68e-02 -0.278 0.132 0.912 CD8_CTL L2
ENSG00000134644 PUM1 -240069 sc-eQTL 7.10e-01 0.0484 0.13 0.912 CD8_CTL L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 7.81e-01 -0.04 0.144 0.912 CD8_CTL L2
ENSG00000162517 PEF1 -818974 sc-eQTL 2.17e-02 0.286 0.124 0.912 CD8_CTL L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 8.15e-01 -0.0354 0.151 0.912 CD8_CTL L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 2.83e-01 0.153 0.142 0.912 CD8_CTL L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 8.52e-01 -0.0304 0.162 0.912 CD8_Naive L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 4.60e-01 -0.103 0.14 0.912 CD8_Naive L2
ENSG00000134644 PUM1 -240069 sc-eQTL 9.52e-01 0.00684 0.112 0.912 CD8_Naive L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 5.52e-01 0.0642 0.108 0.912 CD8_Naive L2
ENSG00000162517 PEF1 -818974 sc-eQTL 8.00e-01 -0.038 0.15 0.912 CD8_Naive L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 5.79e-02 0.254 0.133 0.912 CD8_Naive L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 3.20e-01 -0.146 0.146 0.912 CD8_Naive L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 6.10e-01 -0.0928 0.182 0.917 CD8_TCM L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 2.35e-01 -0.198 0.166 0.917 CD8_TCM L2
ENSG00000134644 PUM1 -240069 sc-eQTL 6.98e-02 -0.283 0.155 0.917 CD8_TCM L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 8.07e-01 0.0402 0.164 0.917 CD8_TCM L2
ENSG00000162517 PEF1 -818974 sc-eQTL 9.24e-01 -0.016 0.168 0.917 CD8_TCM L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 4.92e-02 0.297 0.15 0.917 CD8_TCM L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 4.73e-02 -0.303 0.152 0.917 CD8_TCM L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 4.70e-01 0.125 0.172 0.913 CD8_TEM L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 8.41e-01 0.0331 0.165 0.913 CD8_TEM L2
ENSG00000134644 PUM1 -240069 sc-eQTL 2.50e-01 -0.195 0.169 0.913 CD8_TEM L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 6.35e-01 0.0755 0.159 0.913 CD8_TEM L2
ENSG00000162517 PEF1 -818974 sc-eQTL 3.62e-01 0.137 0.149 0.913 CD8_TEM L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 5.28e-01 0.104 0.165 0.913 CD8_TEM L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 6.71e-01 0.0635 0.149 0.913 CD8_TEM L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 6.25e-01 0.084 0.172 0.916 MAIT L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 8.29e-01 -0.033 0.152 0.916 MAIT L2
ENSG00000134644 PUM1 -240069 sc-eQTL 3.02e-01 0.151 0.146 0.916 MAIT L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 4.39e-01 0.107 0.138 0.916 MAIT L2
ENSG00000162517 PEF1 -818974 sc-eQTL 5.00e-01 -0.102 0.151 0.916 MAIT L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 1.16e-01 0.241 0.153 0.916 MAIT L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 4.81e-01 -0.112 0.158 0.916 MAIT L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 7.46e-01 -0.057 0.176 0.909 NK_CD56bright L2
ENSG00000121753 ADGRB2 -938971 sc-eQTL 6.05e-01 -0.0714 0.138 0.909 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 7.84e-01 -0.0408 0.149 0.909 NK_CD56bright L2
ENSG00000134644 PUM1 -240069 sc-eQTL 7.87e-01 -0.0422 0.156 0.909 NK_CD56bright L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 9.20e-01 0.0155 0.154 0.909 NK_CD56bright L2
ENSG00000162517 PEF1 -818974 sc-eQTL 3.18e-01 0.149 0.149 0.909 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 1.75e-01 0.21 0.154 0.909 NK_CD56bright L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 7.96e-01 0.0395 0.153 0.909 NK_CD56bright L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 1.12e-01 0.259 0.162 0.912 NK_CD56dim L2
ENSG00000121753 ADGRB2 -938971 sc-eQTL 5.38e-01 0.0887 0.144 0.912 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 6.28e-01 -0.0587 0.121 0.912 NK_CD56dim L2
ENSG00000134644 PUM1 -240069 sc-eQTL 1.60e-01 -0.174 0.123 0.912 NK_CD56dim L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 4.65e-01 0.0966 0.132 0.912 NK_CD56dim L2
ENSG00000162517 PEF1 -818974 sc-eQTL 2.32e-01 0.141 0.117 0.912 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 7.24e-01 -0.0585 0.166 0.912 NK_CD56dim L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 7.70e-01 0.04 0.137 0.912 NK_CD56dim L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 7.78e-01 -0.0482 0.171 0.906 NK_HLA L2
ENSG00000121753 ADGRB2 -938971 sc-eQTL 5.38e-01 0.0835 0.135 0.906 NK_HLA L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 5.21e-01 -0.0978 0.152 0.906 NK_HLA L2
ENSG00000134644 PUM1 -240069 sc-eQTL 1.78e-01 -0.2 0.148 0.906 NK_HLA L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 5.10e-01 -0.0935 0.142 0.906 NK_HLA L2
ENSG00000162517 PEF1 -818974 sc-eQTL 3.71e-02 0.331 0.158 0.906 NK_HLA L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 9.95e-01 0.00102 0.151 0.906 NK_HLA L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 5.02e-01 -0.098 0.146 0.906 NK_HLA L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 1.08e-01 0.259 0.16 0.912 NK_cytokine L2
ENSG00000121753 ADGRB2 -938971 sc-eQTL 2.44e-01 0.17 0.145 0.912 NK_cytokine L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 3.10e-01 -0.128 0.126 0.912 NK_cytokine L2
ENSG00000134644 PUM1 -240069 sc-eQTL 4.80e-01 -0.0963 0.136 0.912 NK_cytokine L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 6.27e-01 0.073 0.15 0.912 NK_cytokine L2
ENSG00000162517 PEF1 -818974 sc-eQTL 6.33e-01 -0.0612 0.128 0.912 NK_cytokine L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 2.24e-01 0.193 0.158 0.912 NK_cytokine L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 7.38e-01 0.0495 0.148 0.912 NK_cytokine L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 9.30e-01 0.0157 0.177 0.893 PB L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 1.94e-01 -0.266 0.204 0.893 PB L2
ENSG00000134644 PUM1 -240069 sc-eQTL 1.97e-01 0.23 0.177 0.893 PB L2
ENSG00000162510 MATN1 102337 sc-eQTL 8.80e-01 -0.0252 0.166 0.893 PB L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 2.71e-01 -0.131 0.118 0.893 PB L2
ENSG00000162517 PEF1 -818974 sc-eQTL 4.86e-01 0.128 0.183 0.893 PB L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 2.82e-01 -0.175 0.162 0.893 PB L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 7.94e-02 0.303 0.171 0.893 PB L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 9.72e-01 -0.00439 0.127 0.913 Pro_T L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 4.46e-01 -0.123 0.161 0.913 Pro_T L2
ENSG00000134644 PUM1 -240069 sc-eQTL 8.08e-02 -0.262 0.149 0.913 Pro_T L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 1.87e-01 0.142 0.107 0.913 Pro_T L2
ENSG00000162517 PEF1 -818974 sc-eQTL 1.39e-01 0.234 0.157 0.913 Pro_T L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 6.49e-01 0.0685 0.151 0.913 Pro_T L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 5.79e-02 0.262 0.137 0.913 Pro_T L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 1.22e-01 0.263 0.169 0.912 Treg L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 9.58e-01 0.00877 0.165 0.912 Treg L2
ENSG00000134644 PUM1 -240069 sc-eQTL 2.78e-01 -0.143 0.131 0.912 Treg L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 9.03e-01 0.0185 0.151 0.912 Treg L2
ENSG00000162517 PEF1 -818974 sc-eQTL 2.68e-01 -0.18 0.163 0.912 Treg L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 8.30e-03 0.403 0.151 0.912 Treg L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 6.16e-01 -0.077 0.153 0.912 Treg L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 4.03e-01 -0.142 0.169 0.917 cDC L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 3.11e-01 0.186 0.183 0.917 cDC L2
ENSG00000134644 PUM1 -240069 sc-eQTL 8.23e-01 0.0354 0.158 0.917 cDC L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 3.98e-01 -0.0935 0.11 0.917 cDC L2
ENSG00000162517 PEF1 -818974 sc-eQTL 4.93e-02 0.313 0.158 0.917 cDC L2
ENSG00000168528 SERINC2 -583643 sc-eQTL 9.61e-01 0.00695 0.142 0.917 cDC L2
ENSG00000284543 LINC01226 -680304 sc-eQTL 1.62e-01 -0.194 0.139 0.917 cDC L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 5.30e-01 -0.0944 0.15 0.917 cDC L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 7.10e-01 -0.0491 0.132 0.912 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 8.36e-01 -0.0305 0.147 0.912 cMono_IL1B L2
ENSG00000134644 PUM1 -240069 sc-eQTL 2.31e-01 -0.119 0.0993 0.912 cMono_IL1B L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 6.62e-02 -0.16 0.0867 0.912 cMono_IL1B L2
ENSG00000162512 SDC3 -82836 sc-eQTL 9.96e-01 0.000736 0.165 0.912 cMono_IL1B L2
ENSG00000162517 PEF1 -818974 sc-eQTL 4.38e-01 0.104 0.134 0.912 cMono_IL1B L2
ENSG00000168528 SERINC2 -583643 sc-eQTL 7.79e-03 0.441 0.164 0.912 cMono_IL1B L2
ENSG00000284543 LINC01226 -680304 sc-eQTL 5.16e-01 0.0959 0.147 0.912 cMono_IL1B L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 9.99e-01 0.000213 0.137 0.912 cMono_IL1B L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 5.78e-01 0.0775 0.139 0.912 cMono_S100A L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 3.66e-03 -0.474 0.161 0.912 cMono_S100A L2
ENSG00000134644 PUM1 -240069 sc-eQTL 5.83e-01 0.0654 0.119 0.912 cMono_S100A L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 1.42e-01 -0.134 0.0909 0.912 cMono_S100A L2
ENSG00000162512 SDC3 -82836 sc-eQTL 3.79e-01 0.139 0.158 0.912 cMono_S100A L2
ENSG00000162517 PEF1 -818974 sc-eQTL 7.05e-01 -0.0541 0.142 0.912 cMono_S100A L2
ENSG00000168528 SERINC2 -583643 sc-eQTL 7.06e-03 0.447 0.164 0.912 cMono_S100A L2
ENSG00000284543 LINC01226 -680304 sc-eQTL 2.72e-01 0.149 0.135 0.912 cMono_S100A L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 2.24e-01 -0.166 0.136 0.912 cMono_S100A L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 5.54e-03 0.606 0.215 0.921 gdT L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 9.10e-01 -0.0214 0.19 0.921 gdT L2
ENSG00000134644 PUM1 -240069 sc-eQTL 9.16e-01 -0.0207 0.196 0.921 gdT L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 3.39e-01 0.203 0.212 0.921 gdT L2
ENSG00000162517 PEF1 -818974 sc-eQTL 1.85e-01 -0.257 0.193 0.921 gdT L2
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 4.24e-01 0.157 0.196 0.921 gdT L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 1.74e-01 0.258 0.189 0.921 gdT L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 1.55e-01 0.223 0.156 0.909 intMono L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 7.58e-01 -0.0522 0.169 0.909 intMono L2
ENSG00000134644 PUM1 -240069 sc-eQTL 1.65e-01 -0.199 0.143 0.909 intMono L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 9.97e-01 -0.000415 0.112 0.909 intMono L2
ENSG00000162512 SDC3 -82836 sc-eQTL 2.68e-01 -0.17 0.154 0.909 intMono L2
ENSG00000162517 PEF1 -818974 sc-eQTL 2.52e-01 0.185 0.161 0.909 intMono L2
ENSG00000168528 SERINC2 -583643 sc-eQTL 7.29e-02 0.288 0.16 0.909 intMono L2
ENSG00000284543 LINC01226 -680304 sc-eQTL 8.26e-01 0.0336 0.153 0.909 intMono L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 8.17e-01 0.0354 0.153 0.909 intMono L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 5.71e-01 -0.0806 0.142 0.91 ncMono L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 2.21e-01 -0.186 0.151 0.91 ncMono L2
ENSG00000134644 PUM1 -240069 sc-eQTL 4.71e-01 -0.0893 0.124 0.91 ncMono L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 1.41e-01 -0.165 0.112 0.91 ncMono L2
ENSG00000162512 SDC3 -82836 sc-eQTL 9.02e-01 0.0155 0.126 0.91 ncMono L2
ENSG00000162517 PEF1 -818974 sc-eQTL 7.88e-01 0.039 0.145 0.91 ncMono L2
ENSG00000168528 SERINC2 -583643 sc-eQTL 1.49e-01 0.198 0.137 0.91 ncMono L2
ENSG00000284543 LINC01226 -680304 sc-eQTL 7.70e-01 0.0402 0.138 0.91 ncMono L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 1.24e-01 -0.219 0.142 0.91 ncMono L2
ENSG00000060688 SNRNP40 -470866 sc-eQTL 1.17e-01 0.256 0.162 0.912 pDC L2
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 2.59e-01 0.202 0.179 0.912 pDC L2
ENSG00000134644 PUM1 -240069 sc-eQTL 4.91e-01 -0.102 0.148 0.912 pDC L2
ENSG00000162511 LAPTM5 68148 sc-eQTL 4.81e-01 -0.0975 0.138 0.912 pDC L2
ENSG00000162517 PEF1 -818974 sc-eQTL 8.66e-01 -0.0303 0.179 0.912 pDC L2
ENSG00000168528 SERINC2 -583643 sc-eQTL 5.27e-01 0.106 0.167 0.912 pDC L2
ENSG00000284543 LINC01226 -680304 sc-eQTL 1.16e-02 -0.325 0.127 0.912 pDC L2
ENSG00000287510 AL137857.1 94229 sc-eQTL 3.68e-01 0.138 0.153 0.912 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -470866 sc-eQTL 6.16e-01 0.084 0.167 0.912 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 5.77e-01 0.0778 0.139 0.912 B_Memory LOneK1K
ENSG00000134644 PUM1 -240069 sc-eQTL 4.73e-01 0.0886 0.123 0.912 B_Memory LOneK1K
ENSG00000162510 MATN1 102337 sc-eQTL 3.87e-01 -0.122 0.141 0.912 B_Memory LOneK1K
ENSG00000162511 LAPTM5 68148 sc-eQTL 9.68e-01 0.00357 0.0885 0.912 B_Memory LOneK1K
ENSG00000162517 PEF1 -818974 sc-eQTL 1.50e-01 -0.211 0.146 0.912 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 4.24e-01 0.0936 0.117 0.912 B_Memory LOneK1K
ENSG00000287510 AL137857.1 94229 sc-eQTL 9.67e-01 -0.00522 0.128 0.912 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -470866 sc-eQTL 5.95e-01 -0.0806 0.151 0.912 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 6.33e-01 -0.0572 0.12 0.912 B_Naive LOneK1K
ENSG00000134644 PUM1 -240069 sc-eQTL 4.75e-01 0.0809 0.113 0.912 B_Naive LOneK1K
ENSG00000162510 MATN1 102337 sc-eQTL 6.05e-01 0.0564 0.109 0.912 B_Naive LOneK1K
ENSG00000162511 LAPTM5 68148 sc-eQTL 8.72e-01 -0.0124 0.0768 0.912 B_Naive LOneK1K
ENSG00000162517 PEF1 -818974 sc-eQTL 2.99e-01 0.145 0.14 0.912 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 8.32e-01 -0.0211 0.0991 0.912 B_Naive LOneK1K
ENSG00000287510 AL137857.1 94229 sc-eQTL 3.60e-01 0.108 0.118 0.912 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -470866 sc-eQTL 8.73e-01 -0.0205 0.128 0.912 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 8.85e-02 -0.246 0.144 0.912 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -240069 sc-eQTL 2.26e-01 -0.112 0.092 0.912 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 68148 sc-eQTL 2.31e-01 -0.0971 0.0808 0.912 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -82836 sc-eQTL 4.58e-01 0.123 0.165 0.912 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -818974 sc-eQTL 6.65e-01 -0.0505 0.116 0.912 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -583643 sc-eQTL 1.04e-02 0.433 0.168 0.912 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -680304 sc-eQTL 4.44e-01 0.107 0.139 0.912 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 94229 sc-eQTL 4.87e-01 -0.0909 0.131 0.912 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -470866 sc-eQTL 9.28e-01 0.0124 0.138 0.912 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 2.98e-01 -0.157 0.15 0.912 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -240069 sc-eQTL 3.42e-01 -0.117 0.123 0.912 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 68148 sc-eQTL 9.17e-01 -0.0103 0.0987 0.912 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -82836 sc-eQTL 4.93e-01 -0.099 0.144 0.912 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -818974 sc-eQTL 7.08e-01 -0.0492 0.131 0.912 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -583643 sc-eQTL 3.58e-02 0.313 0.148 0.912 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -680304 sc-eQTL 7.24e-01 0.0502 0.142 0.912 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 94229 sc-eQTL 5.20e-01 -0.0914 0.142 0.912 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -470866 sc-eQTL 6.55e-02 0.288 0.156 0.912 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -938971 sc-eQTL 3.00e-01 0.139 0.133 0.912 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -471060 sc-eQTL 2.24e-01 -0.13 0.107 0.912 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -240069 sc-eQTL 1.24e-01 -0.181 0.117 0.912 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 68148 sc-eQTL 5.49e-01 0.0788 0.131 0.912 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -818974 sc-eQTL 3.69e-01 0.0896 0.0996 0.912 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 107418 sc-eQTL 3.73e-01 0.135 0.151 0.912 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 94229 sc-eQTL 8.42e-01 0.0261 0.131 0.912 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 \N 107418 4.9e-06 4.77e-06 6.69e-07 3.08e-06 8.57e-07 1.21e-06 4.27e-06 9.28e-07 4.53e-06 1.94e-06 4.99e-06 3.11e-06 7.2e-06 2.34e-06 1.37e-06 2.43e-06 1.75e-06 2.78e-06 1.36e-06 9.88e-07 1.98e-06 4.1e-06 3.38e-06 1.76e-06 5.54e-06 1.38e-06 2.59e-06 1.43e-06 4.09e-06 3.77e-06 2.72e-06 5.43e-07 6.46e-07 1.82e-06 2.15e-06 8.88e-07 9.24e-07 4.59e-07 1.34e-06 3.27e-07 2.11e-07 5.74e-06 4.34e-07 1.55e-07 4.06e-07 3.54e-07 7.84e-07 2.15e-07 2.55e-07