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Genes within 1Mb (chr1:30822883:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -473905 sc-eQTL 8.45e-01 0.0158 0.0811 0.645 B L1
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 6.78e-01 0.027 0.065 0.645 B L1
ENSG00000134644 PUM1 -243108 sc-eQTL 3.43e-01 0.0517 0.0544 0.645 B L1
ENSG00000162510 MATN1 99298 sc-eQTL 7.79e-01 -0.0161 0.0573 0.645 B L1
ENSG00000162511 LAPTM5 65109 sc-eQTL 8.47e-02 -0.0772 0.0446 0.645 B L1
ENSG00000162517 PEF1 -822013 sc-eQTL 5.53e-01 -0.0402 0.0677 0.645 B L1
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 5.43e-01 -0.0321 0.0525 0.645 B L1
ENSG00000287510 AL137857.1 91190 sc-eQTL 9.68e-01 -0.00248 0.0622 0.645 B L1
ENSG00000060688 SNRNP40 -473905 sc-eQTL 7.60e-01 -0.0216 0.0704 0.645 CD4T L1
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 7.37e-01 0.0185 0.055 0.645 CD4T L1
ENSG00000134644 PUM1 -243108 sc-eQTL 9.36e-01 -0.00393 0.049 0.645 CD4T L1
ENSG00000162511 LAPTM5 65109 sc-eQTL 5.39e-01 0.0333 0.0542 0.645 CD4T L1
ENSG00000162517 PEF1 -822013 sc-eQTL 6.21e-01 0.0281 0.0567 0.645 CD4T L1
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 7.69e-01 -0.0143 0.0485 0.645 CD4T L1
ENSG00000287510 AL137857.1 91190 sc-eQTL 5.19e-01 0.0375 0.0581 0.645 CD4T L1
ENSG00000060688 SNRNP40 -473905 sc-eQTL 5.72e-01 0.0524 0.0925 0.645 CD8T L1
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 7.26e-01 0.0216 0.0616 0.645 CD8T L1
ENSG00000134644 PUM1 -243108 sc-eQTL 2.22e-01 0.0663 0.0541 0.645 CD8T L1
ENSG00000162511 LAPTM5 65109 sc-eQTL 9.66e-01 -0.00224 0.0527 0.645 CD8T L1
ENSG00000162517 PEF1 -822013 sc-eQTL 7.75e-01 0.0186 0.0649 0.645 CD8T L1
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 5.82e-01 -0.0341 0.0617 0.645 CD8T L1
ENSG00000287510 AL137857.1 91190 sc-eQTL 8.59e-01 -0.0138 0.0776 0.645 CD8T L1
ENSG00000060688 SNRNP40 -473905 sc-eQTL 4.10e-01 0.0675 0.0818 0.644 DC L1
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 1.78e-01 0.131 0.0965 0.644 DC L1
ENSG00000134644 PUM1 -243108 sc-eQTL 8.24e-01 -0.0169 0.076 0.644 DC L1
ENSG00000162511 LAPTM5 65109 sc-eQTL 9.37e-01 0.00433 0.0542 0.644 DC L1
ENSG00000162517 PEF1 -822013 sc-eQTL 5.22e-01 -0.0563 0.0879 0.644 DC L1
ENSG00000168528 SERINC2 -586682 sc-eQTL 9.61e-01 0.00435 0.0895 0.644 DC L1
ENSG00000284543 LINC01226 -683343 sc-eQTL 1.43e-02 -0.144 0.0584 0.644 DC L1
ENSG00000287510 AL137857.1 91190 sc-eQTL 1.46e-01 -0.125 0.0853 0.644 DC L1
ENSG00000060688 SNRNP40 -473905 sc-eQTL 4.71e-01 0.0459 0.0635 0.645 Mono L1
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 8.39e-01 0.0161 0.0788 0.645 Mono L1
ENSG00000134644 PUM1 -243108 sc-eQTL 9.01e-02 -0.0855 0.0502 0.645 Mono L1
ENSG00000162511 LAPTM5 65109 sc-eQTL 5.02e-01 -0.0313 0.0464 0.645 Mono L1
ENSG00000162512 SDC3 -85875 sc-eQTL 2.76e-01 0.0972 0.0891 0.645 Mono L1
ENSG00000162517 PEF1 -822013 sc-eQTL 2.91e-01 0.0662 0.0625 0.645 Mono L1
ENSG00000168528 SERINC2 -586682 sc-eQTL 9.47e-01 -0.00643 0.0959 0.645 Mono L1
ENSG00000284543 LINC01226 -683343 sc-eQTL 5.10e-02 0.164 0.0837 0.645 Mono L1
ENSG00000287510 AL137857.1 91190 sc-eQTL 3.97e-01 -0.0625 0.0737 0.645 Mono L1
ENSG00000060688 SNRNP40 -473905 sc-eQTL 8.61e-01 0.0154 0.088 0.644 NK L1
ENSG00000121753 ADGRB2 -942010 sc-eQTL 6.09e-01 -0.0388 0.0757 0.644 NK L1
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 8.70e-01 -0.00991 0.0602 0.644 NK L1
ENSG00000134644 PUM1 -243108 sc-eQTL 7.54e-01 -0.0198 0.0632 0.644 NK L1
ENSG00000162511 LAPTM5 65109 sc-eQTL 7.02e-01 0.0278 0.0727 0.644 NK L1
ENSG00000162517 PEF1 -822013 sc-eQTL 6.91e-01 -0.0211 0.0531 0.644 NK L1
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 7.34e-01 0.0278 0.0817 0.644 NK L1
ENSG00000287510 AL137857.1 91190 sc-eQTL 6.66e-01 0.0326 0.0754 0.644 NK L1
ENSG00000060688 SNRNP40 -473905 sc-eQTL 2.30e-01 0.0806 0.0669 0.645 Other_T L1
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 1.78e-01 0.0966 0.0715 0.645 Other_T L1
ENSG00000134644 PUM1 -243108 sc-eQTL 1.08e-01 0.103 0.0641 0.645 Other_T L1
ENSG00000162511 LAPTM5 65109 sc-eQTL 1.37e-01 0.0784 0.0526 0.645 Other_T L1
ENSG00000162517 PEF1 -822013 sc-eQTL 9.33e-01 0.00597 0.0706 0.645 Other_T L1
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 5.20e-01 -0.0558 0.0865 0.645 Other_T L1
ENSG00000287510 AL137857.1 91190 sc-eQTL 9.08e-01 -0.0104 0.0902 0.645 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -473905 sc-eQTL 3.80e-01 0.0923 0.105 0.64 B_Activated L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 6.55e-01 0.0475 0.106 0.64 B_Activated L2
ENSG00000134644 PUM1 -243108 sc-eQTL 3.54e-01 -0.0914 0.0983 0.64 B_Activated L2
ENSG00000162510 MATN1 99298 sc-eQTL 6.13e-01 -0.0436 0.0861 0.64 B_Activated L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 4.86e-01 -0.0419 0.06 0.64 B_Activated L2
ENSG00000162517 PEF1 -822013 sc-eQTL 3.33e-01 0.099 0.102 0.64 B_Activated L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 6.99e-01 0.0376 0.097 0.64 B_Activated L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 7.64e-01 -0.0258 0.0858 0.64 B_Activated L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 4.35e-01 -0.0769 0.0984 0.646 B_Intermediate L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 5.10e-01 0.0542 0.082 0.646 B_Intermediate L2
ENSG00000134644 PUM1 -243108 sc-eQTL 3.52e-01 0.0721 0.0773 0.646 B_Intermediate L2
ENSG00000162510 MATN1 99298 sc-eQTL 7.23e-01 0.0286 0.0806 0.646 B_Intermediate L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 5.58e-01 -0.029 0.0494 0.646 B_Intermediate L2
ENSG00000162517 PEF1 -822013 sc-eQTL 1.89e-01 -0.121 0.0915 0.646 B_Intermediate L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 8.73e-02 0.118 0.069 0.646 B_Intermediate L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 3.52e-01 -0.0724 0.0775 0.646 B_Intermediate L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 8.09e-01 0.0231 0.0952 0.647 B_Memory L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 9.56e-01 0.00484 0.0877 0.647 B_Memory L2
ENSG00000134644 PUM1 -243108 sc-eQTL 4.84e-01 0.0535 0.0763 0.647 B_Memory L2
ENSG00000162510 MATN1 99298 sc-eQTL 9.31e-01 -0.00636 0.0731 0.647 B_Memory L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 7.63e-01 -0.0196 0.0647 0.647 B_Memory L2
ENSG00000162517 PEF1 -822013 sc-eQTL 3.78e-01 -0.0762 0.0863 0.647 B_Memory L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 8.21e-03 -0.195 0.0729 0.647 B_Memory L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 4.67e-01 0.0631 0.0867 0.647 B_Memory L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 6.03e-02 0.165 0.0876 0.645 B_Naive1 L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 2.87e-01 0.0811 0.0761 0.645 B_Naive1 L2
ENSG00000134644 PUM1 -243108 sc-eQTL 7.85e-01 0.0184 0.0673 0.645 B_Naive1 L2
ENSG00000162510 MATN1 99298 sc-eQTL 5.53e-01 -0.0406 0.0682 0.645 B_Naive1 L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 5.06e-02 -0.0888 0.0452 0.645 B_Naive1 L2
ENSG00000162517 PEF1 -822013 sc-eQTL 6.74e-01 -0.0338 0.0804 0.645 B_Naive1 L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 5.20e-01 -0.0386 0.0598 0.645 B_Naive1 L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 8.16e-01 -0.0172 0.074 0.645 B_Naive1 L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 5.12e-01 -0.0617 0.0938 0.646 B_Naive2 L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 2.34e-01 0.0922 0.0773 0.646 B_Naive2 L2
ENSG00000134644 PUM1 -243108 sc-eQTL 8.58e-01 0.0136 0.0759 0.646 B_Naive2 L2
ENSG00000162510 MATN1 99298 sc-eQTL 6.81e-01 0.03 0.0728 0.646 B_Naive2 L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 1.38e-01 -0.0732 0.0492 0.646 B_Naive2 L2
ENSG00000162517 PEF1 -822013 sc-eQTL 5.93e-01 0.0482 0.0899 0.646 B_Naive2 L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 7.90e-01 -0.0192 0.072 0.646 B_Naive2 L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 5.44e-01 0.0472 0.0777 0.646 B_Naive2 L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 8.60e-02 0.159 0.0922 0.645 CD4_CTL L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 7.77e-01 -0.0259 0.0913 0.645 CD4_CTL L2
ENSG00000134644 PUM1 -243108 sc-eQTL 4.52e-02 0.179 0.0887 0.645 CD4_CTL L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 7.35e-01 -0.0271 0.0798 0.645 CD4_CTL L2
ENSG00000162517 PEF1 -822013 sc-eQTL 8.52e-01 0.0153 0.0818 0.645 CD4_CTL L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 8.65e-01 -0.0148 0.0873 0.645 CD4_CTL L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 3.94e-01 0.0657 0.0769 0.645 CD4_CTL L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 9.61e-01 -0.00362 0.0736 0.645 CD4_Naive L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 1.03e-01 0.106 0.0648 0.645 CD4_Naive L2
ENSG00000134644 PUM1 -243108 sc-eQTL 4.14e-01 -0.0425 0.052 0.645 CD4_Naive L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 3.37e-01 0.0536 0.0557 0.645 CD4_Naive L2
ENSG00000162517 PEF1 -822013 sc-eQTL 6.69e-01 0.0262 0.0612 0.645 CD4_Naive L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 5.30e-01 -0.0356 0.0566 0.645 CD4_Naive L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 4.04e-01 0.0543 0.0649 0.645 CD4_Naive L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 8.53e-01 0.0171 0.092 0.645 CD4_TCM L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 2.28e-02 -0.168 0.0733 0.645 CD4_TCM L2
ENSG00000134644 PUM1 -243108 sc-eQTL 9.71e-01 -0.00238 0.0657 0.645 CD4_TCM L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 4.34e-01 0.0427 0.0544 0.645 CD4_TCM L2
ENSG00000162517 PEF1 -822013 sc-eQTL 4.70e-01 0.0528 0.0729 0.645 CD4_TCM L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 8.71e-01 0.0112 0.0691 0.645 CD4_TCM L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 2.50e-01 -0.0885 0.0768 0.645 CD4_TCM L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 5.53e-01 -0.0545 0.0918 0.645 CD4_TEM L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 1.40e-01 0.129 0.0871 0.645 CD4_TEM L2
ENSG00000134644 PUM1 -243108 sc-eQTL 8.14e-01 0.0172 0.0729 0.645 CD4_TEM L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 7.49e-01 0.0237 0.0737 0.645 CD4_TEM L2
ENSG00000162517 PEF1 -822013 sc-eQTL 4.48e-01 0.0628 0.0825 0.645 CD4_TEM L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 1.93e-02 0.201 0.0852 0.645 CD4_TEM L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 5.41e-01 -0.0519 0.0849 0.645 CD4_TEM L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 4.11e-01 0.0826 0.1 0.645 CD8_CTL L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 5.29e-01 0.0485 0.0769 0.645 CD8_CTL L2
ENSG00000134644 PUM1 -243108 sc-eQTL 9.47e-01 0.00493 0.0747 0.645 CD8_CTL L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 5.71e-01 -0.0469 0.0827 0.645 CD8_CTL L2
ENSG00000162517 PEF1 -822013 sc-eQTL 3.23e-01 0.0712 0.0719 0.645 CD8_CTL L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 7.92e-01 -0.023 0.087 0.645 CD8_CTL L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 4.01e-01 0.0687 0.0817 0.645 CD8_CTL L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 9.16e-01 -0.00976 0.092 0.645 CD8_Naive L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 4.81e-01 0.0559 0.0792 0.645 CD8_Naive L2
ENSG00000134644 PUM1 -243108 sc-eQTL 2.28e-01 0.0769 0.0636 0.645 CD8_Naive L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 3.84e-01 0.0532 0.061 0.645 CD8_Naive L2
ENSG00000162517 PEF1 -822013 sc-eQTL 7.35e-01 0.0288 0.085 0.645 CD8_Naive L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 8.51e-01 0.0144 0.0763 0.645 CD8_Naive L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 3.89e-01 -0.0717 0.083 0.645 CD8_Naive L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 8.36e-01 -0.0212 0.102 0.65 CD8_TCM L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 8.56e-01 -0.0169 0.0935 0.65 CD8_TCM L2
ENSG00000134644 PUM1 -243108 sc-eQTL 4.18e-01 -0.0712 0.0878 0.65 CD8_TCM L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 5.96e-01 -0.0488 0.092 0.65 CD8_TCM L2
ENSG00000162517 PEF1 -822013 sc-eQTL 2.10e-01 -0.118 0.0937 0.65 CD8_TCM L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 2.57e-02 0.189 0.0841 0.65 CD8_TCM L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 1.56e-01 -0.122 0.0857 0.65 CD8_TCM L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 3.91e-01 0.082 0.0955 0.637 CD8_TEM L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 1.76e-01 0.124 0.0913 0.637 CD8_TEM L2
ENSG00000134644 PUM1 -243108 sc-eQTL 1.12e-01 -0.149 0.0932 0.637 CD8_TEM L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 8.04e-01 0.0219 0.0882 0.637 CD8_TEM L2
ENSG00000162517 PEF1 -822013 sc-eQTL 6.15e-02 0.155 0.0823 0.637 CD8_TEM L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 7.37e-01 -0.0308 0.0915 0.637 CD8_TEM L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 4.33e-01 0.065 0.0827 0.637 CD8_TEM L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 9.24e-02 0.162 0.096 0.645 MAIT L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 1.78e-02 0.202 0.0845 0.645 MAIT L2
ENSG00000134644 PUM1 -243108 sc-eQTL 6.28e-02 0.152 0.0814 0.645 MAIT L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 5.53e-01 0.046 0.0774 0.645 MAIT L2
ENSG00000162517 PEF1 -822013 sc-eQTL 1.70e-01 0.117 0.0847 0.645 MAIT L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 1.39e-01 -0.127 0.0858 0.645 MAIT L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 4.81e-01 -0.0627 0.0888 0.645 MAIT L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 4.20e-01 -0.0806 0.0998 0.642 NK_CD56bright L2
ENSG00000121753 ADGRB2 -942010 sc-eQTL 7.65e-01 -0.0234 0.0782 0.642 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 9.12e-01 -0.00934 0.0844 0.642 NK_CD56bright L2
ENSG00000134644 PUM1 -243108 sc-eQTL 7.45e-02 0.158 0.088 0.642 NK_CD56bright L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 1.99e-01 0.112 0.0871 0.642 NK_CD56bright L2
ENSG00000162517 PEF1 -822013 sc-eQTL 7.73e-02 -0.15 0.0843 0.642 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 1.05e-02 0.223 0.0865 0.642 NK_CD56bright L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 6.59e-01 0.0382 0.0866 0.642 NK_CD56bright L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 9.59e-01 0.00485 0.0937 0.642 NK_CD56dim L2
ENSG00000121753 ADGRB2 -942010 sc-eQTL 4.09e-01 -0.0682 0.0823 0.642 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 7.07e-01 0.0261 0.0693 0.642 NK_CD56dim L2
ENSG00000134644 PUM1 -243108 sc-eQTL 2.93e-01 -0.0747 0.0709 0.642 NK_CD56dim L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 4.14e-01 0.062 0.0757 0.642 NK_CD56dim L2
ENSG00000162517 PEF1 -822013 sc-eQTL 8.31e-01 -0.0144 0.0675 0.642 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 3.89e-01 -0.0819 0.0948 0.642 NK_CD56dim L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 8.04e-01 0.0195 0.0784 0.642 NK_CD56dim L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 9.83e-01 0.0021 0.0998 0.637 NK_HLA L2
ENSG00000121753 ADGRB2 -942010 sc-eQTL 9.27e-01 -0.0073 0.0792 0.637 NK_HLA L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 5.17e-01 -0.0578 0.089 0.637 NK_HLA L2
ENSG00000134644 PUM1 -243108 sc-eQTL 6.20e-01 -0.0431 0.0868 0.637 NK_HLA L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 7.21e-02 -0.149 0.0822 0.637 NK_HLA L2
ENSG00000162517 PEF1 -822013 sc-eQTL 6.02e-02 0.175 0.0925 0.637 NK_HLA L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 9.97e-01 -0.000315 0.0881 0.637 NK_HLA L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 6.49e-01 -0.0388 0.0852 0.637 NK_HLA L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 1.69e-01 0.125 0.0903 0.642 NK_cytokine L2
ENSG00000121753 ADGRB2 -942010 sc-eQTL 7.38e-01 0.0275 0.0819 0.642 NK_cytokine L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 5.07e-01 -0.047 0.0707 0.642 NK_cytokine L2
ENSG00000134644 PUM1 -243108 sc-eQTL 8.78e-01 0.0118 0.0766 0.642 NK_cytokine L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 8.80e-01 -0.0128 0.0843 0.642 NK_cytokine L2
ENSG00000162517 PEF1 -822013 sc-eQTL 3.82e-01 -0.0628 0.0717 0.642 NK_cytokine L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 2.84e-01 0.0956 0.0891 0.642 NK_cytokine L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 5.02e-01 0.0558 0.083 0.642 NK_cytokine L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 2.55e-01 0.125 0.11 0.641 PB L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 5.96e-02 -0.239 0.126 0.641 PB L2
ENSG00000134644 PUM1 -243108 sc-eQTL 4.81e-01 0.0782 0.111 0.641 PB L2
ENSG00000162510 MATN1 99298 sc-eQTL 1.35e-01 0.154 0.102 0.641 PB L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 4.76e-01 -0.0528 0.0738 0.641 PB L2
ENSG00000162517 PEF1 -822013 sc-eQTL 1.31e-01 0.172 0.113 0.641 PB L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 3.15e-01 0.102 0.101 0.641 PB L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 5.49e-02 0.206 0.106 0.641 PB L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 1.81e-01 0.0964 0.0719 0.652 Pro_T L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 1.59e-01 -0.129 0.0912 0.652 Pro_T L2
ENSG00000134644 PUM1 -243108 sc-eQTL 1.69e-01 -0.117 0.0851 0.652 Pro_T L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 6.33e-02 0.114 0.0608 0.652 Pro_T L2
ENSG00000162517 PEF1 -822013 sc-eQTL 3.61e-01 0.0821 0.0898 0.652 Pro_T L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 8.86e-01 0.0123 0.0857 0.652 Pro_T L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 4.66e-01 0.0575 0.0787 0.652 Pro_T L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 2.55e-01 -0.107 0.0935 0.645 Treg L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 1.92e-01 -0.118 0.0903 0.645 Treg L2
ENSG00000134644 PUM1 -243108 sc-eQTL 1.68e-01 0.1 0.0723 0.645 Treg L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 9.34e-01 0.00685 0.0831 0.645 Treg L2
ENSG00000162517 PEF1 -822013 sc-eQTL 3.80e-01 -0.0788 0.0896 0.645 Treg L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 4.57e-01 -0.063 0.0846 0.645 Treg L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 6.63e-01 0.0369 0.0845 0.645 Treg L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 7.59e-01 0.0296 0.0964 0.644 cDC L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 5.37e-01 0.0645 0.104 0.644 cDC L2
ENSG00000134644 PUM1 -243108 sc-eQTL 8.61e-01 0.0157 0.0897 0.644 cDC L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 7.19e-01 -0.0227 0.0629 0.644 cDC L2
ENSG00000162517 PEF1 -822013 sc-eQTL 8.86e-01 0.013 0.091 0.644 cDC L2
ENSG00000168528 SERINC2 -586682 sc-eQTL 4.22e-01 -0.0649 0.0806 0.644 cDC L2
ENSG00000284543 LINC01226 -683343 sc-eQTL 8.42e-01 0.0159 0.0793 0.644 cDC L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 2.72e-01 -0.0938 0.0851 0.644 cDC L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 2.51e-01 0.0884 0.0767 0.645 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 8.64e-01 0.0148 0.0859 0.645 cMono_IL1B L2
ENSG00000134644 PUM1 -243108 sc-eQTL 2.14e-02 -0.133 0.0574 0.645 cMono_IL1B L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 3.37e-01 -0.0489 0.0509 0.645 cMono_IL1B L2
ENSG00000162512 SDC3 -85875 sc-eQTL 1.85e-01 0.127 0.0957 0.645 cMono_IL1B L2
ENSG00000162517 PEF1 -822013 sc-eQTL 2.48e-01 0.0907 0.0783 0.645 cMono_IL1B L2
ENSG00000168528 SERINC2 -586682 sc-eQTL 8.45e-01 -0.0191 0.0973 0.645 cMono_IL1B L2
ENSG00000284543 LINC01226 -683343 sc-eQTL 8.11e-02 0.15 0.0854 0.645 cMono_IL1B L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 4.75e-01 0.0574 0.0801 0.645 cMono_IL1B L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 7.14e-01 -0.0297 0.0809 0.645 cMono_S100A L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 6.47e-01 -0.0438 0.0955 0.645 cMono_S100A L2
ENSG00000134644 PUM1 -243108 sc-eQTL 2.27e-01 -0.0835 0.0688 0.645 cMono_S100A L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 7.42e-01 -0.0175 0.0531 0.645 cMono_S100A L2
ENSG00000162512 SDC3 -85875 sc-eQTL 8.54e-01 0.0168 0.0917 0.645 cMono_S100A L2
ENSG00000162517 PEF1 -822013 sc-eQTL 2.03e-01 0.105 0.0825 0.645 cMono_S100A L2
ENSG00000168528 SERINC2 -586682 sc-eQTL 8.70e-01 0.0159 0.0971 0.645 cMono_S100A L2
ENSG00000284543 LINC01226 -683343 sc-eQTL 6.68e-01 0.0338 0.0788 0.645 cMono_S100A L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 6.74e-01 0.0334 0.0792 0.645 cMono_S100A L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 5.67e-01 0.068 0.118 0.645 gdT L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 8.57e-01 0.0184 0.102 0.645 gdT L2
ENSG00000134644 PUM1 -243108 sc-eQTL 2.00e-01 0.134 0.104 0.645 gdT L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 8.38e-01 0.0234 0.114 0.645 gdT L2
ENSG00000162517 PEF1 -822013 sc-eQTL 9.07e-01 -0.0123 0.104 0.645 gdT L2
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 4.29e-01 0.0832 0.105 0.645 gdT L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 5.43e-01 0.0622 0.102 0.645 gdT L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 7.39e-01 0.0298 0.0894 0.64 intMono L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 7.60e-01 -0.0294 0.0961 0.64 intMono L2
ENSG00000134644 PUM1 -243108 sc-eQTL 5.67e-01 0.0467 0.0815 0.64 intMono L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 2.90e-01 -0.0677 0.0638 0.64 intMono L2
ENSG00000162512 SDC3 -85875 sc-eQTL 7.00e-01 0.0338 0.0876 0.64 intMono L2
ENSG00000162517 PEF1 -822013 sc-eQTL 9.55e-01 0.00519 0.092 0.64 intMono L2
ENSG00000168528 SERINC2 -586682 sc-eQTL 7.73e-01 -0.0265 0.0917 0.64 intMono L2
ENSG00000284543 LINC01226 -683343 sc-eQTL 2.60e-02 0.193 0.0858 0.64 intMono L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 1.71e-01 -0.119 0.0865 0.64 intMono L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 7.50e-01 -0.0267 0.0838 0.645 ncMono L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 6.82e-01 -0.0367 0.0894 0.645 ncMono L2
ENSG00000134644 PUM1 -243108 sc-eQTL 5.62e-01 -0.0424 0.073 0.645 ncMono L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 7.39e-01 -0.0221 0.0663 0.645 ncMono L2
ENSG00000162512 SDC3 -85875 sc-eQTL 7.09e-01 -0.0278 0.0744 0.645 ncMono L2
ENSG00000162517 PEF1 -822013 sc-eQTL 7.66e-01 0.0255 0.0853 0.645 ncMono L2
ENSG00000168528 SERINC2 -586682 sc-eQTL 8.69e-01 -0.0134 0.0812 0.645 ncMono L2
ENSG00000284543 LINC01226 -683343 sc-eQTL 7.20e-01 0.0291 0.0811 0.645 ncMono L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 7.34e-02 -0.15 0.0834 0.645 ncMono L2
ENSG00000060688 SNRNP40 -473905 sc-eQTL 6.35e-01 0.0457 0.0962 0.641 pDC L2
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 3.54e-01 0.0979 0.105 0.641 pDC L2
ENSG00000134644 PUM1 -243108 sc-eQTL 4.88e-02 -0.172 0.0865 0.641 pDC L2
ENSG00000162511 LAPTM5 65109 sc-eQTL 9.54e-01 -0.00475 0.0815 0.641 pDC L2
ENSG00000162517 PEF1 -822013 sc-eQTL 7.92e-01 -0.0279 0.106 0.641 pDC L2
ENSG00000168528 SERINC2 -586682 sc-eQTL 3.48e-01 0.0927 0.0985 0.641 pDC L2
ENSG00000284543 LINC01226 -683343 sc-eQTL 2.87e-02 -0.167 0.0755 0.641 pDC L2
ENSG00000287510 AL137857.1 91190 sc-eQTL 7.50e-01 -0.0288 0.0902 0.641 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -473905 sc-eQTL 7.22e-01 -0.0335 0.0939 0.645 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 7.14e-01 0.0286 0.0782 0.645 B_Memory LOneK1K
ENSG00000134644 PUM1 -243108 sc-eQTL 3.51e-01 0.0646 0.0691 0.645 B_Memory LOneK1K
ENSG00000162510 MATN1 99298 sc-eQTL 9.86e-01 -0.0014 0.079 0.645 B_Memory LOneK1K
ENSG00000162511 LAPTM5 65109 sc-eQTL 7.85e-01 -0.0135 0.0496 0.645 B_Memory LOneK1K
ENSG00000162517 PEF1 -822013 sc-eQTL 1.54e-01 -0.117 0.0818 0.645 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 3.99e-01 0.0554 0.0655 0.645 B_Memory LOneK1K
ENSG00000287510 AL137857.1 91190 sc-eQTL 7.10e-01 -0.0266 0.0715 0.645 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -473905 sc-eQTL 5.57e-01 0.0505 0.0858 0.645 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 2.17e-01 0.0838 0.0677 0.645 B_Naive LOneK1K
ENSG00000134644 PUM1 -243108 sc-eQTL 8.41e-01 0.0129 0.0642 0.645 B_Naive LOneK1K
ENSG00000162510 MATN1 99298 sc-eQTL 5.09e-01 -0.0409 0.0618 0.645 B_Naive LOneK1K
ENSG00000162511 LAPTM5 65109 sc-eQTL 6.48e-02 -0.0802 0.0432 0.645 B_Naive LOneK1K
ENSG00000162517 PEF1 -822013 sc-eQTL 9.74e-01 -0.0026 0.0795 0.645 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 3.58e-01 -0.0518 0.0561 0.645 B_Naive LOneK1K
ENSG00000287510 AL137857.1 91190 sc-eQTL 8.72e-01 -0.0108 0.0668 0.645 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -473905 sc-eQTL 2.76e-01 0.0795 0.0727 0.645 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 7.81e-01 0.023 0.0826 0.645 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -243108 sc-eQTL 1.93e-02 -0.123 0.052 0.645 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 65109 sc-eQTL 5.49e-01 -0.0278 0.0463 0.645 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -85875 sc-eQTL 2.10e-01 0.118 0.0942 0.645 CD14_Mono LOneK1K
ENSG00000162517 PEF1 -822013 sc-eQTL 1.85e-01 0.0879 0.0662 0.645 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -586682 sc-eQTL 9.59e-01 -0.00495 0.0972 0.645 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -683343 sc-eQTL 1.48e-01 0.115 0.0793 0.645 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 91190 sc-eQTL 7.02e-01 0.0286 0.0746 0.645 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -473905 sc-eQTL 9.56e-01 -0.00443 0.0796 0.644 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 3.79e-01 -0.0766 0.087 0.644 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -243108 sc-eQTL 9.40e-01 -0.00535 0.0714 0.644 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 65109 sc-eQTL 3.13e-01 -0.0577 0.057 0.644 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -85875 sc-eQTL 4.01e-01 0.07 0.0833 0.644 CD16_Mono LOneK1K
ENSG00000162517 PEF1 -822013 sc-eQTL 3.04e-01 -0.0779 0.0756 0.644 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -586682 sc-eQTL 9.45e-01 -0.00594 0.0865 0.644 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -683343 sc-eQTL 4.30e-02 0.166 0.0813 0.644 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 91190 sc-eQTL 3.20e-02 -0.176 0.0813 0.644 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -473905 sc-eQTL 5.81e-01 0.0489 0.0886 0.642 NK_CD56dim LOneK1K
ENSG00000121753 ADGRB2 -942010 sc-eQTL 7.46e-01 -0.0245 0.0755 0.642 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -474099 sc-eQTL 8.53e-01 -0.0113 0.0605 0.642 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -243108 sc-eQTL 4.56e-01 -0.0494 0.0662 0.642 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 65109 sc-eQTL 7.70e-01 0.0217 0.0741 0.642 NK_CD56dim LOneK1K
ENSG00000162517 PEF1 -822013 sc-eQTL 8.28e-01 -0.0123 0.0563 0.642 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 104379 sc-eQTL 6.80e-01 -0.0353 0.0855 0.642 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 91190 sc-eQTL 7.21e-01 0.0263 0.0738 0.642 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -474099 eQTL 5.14e-03 -0.0517 0.0184 0.0 0.0 0.395

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina